Pregenerated sensors for PDLIM2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022090Ensembl transcript IDs: ENSMUST00000022681.11, ENSMUST00000125300.3, ENSMUST00000127836.8, ENSMUST00000129174.8, ENSMUST00000143393.2, ENSMUST00000153735.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCAACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCACATGTCTGCAGAGTCTaGGAGTGCAGACAGGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: PTLGLTQQGQRGLPNLSSHVCRV*ECRQAE Trigger: CTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATG...TGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCAACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTAGATCATCTATCACCTaGTATCACCCCTTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: VPTLGLTQQGQRGLPNLSRSSIT*YHPFPA Trigger: AGCAGGGAAGGGGTGATAGCAGGTGATAGATGATCT...ACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGTTGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTTCGTGTCAAACACATGTCTGCAGAGTCTaGGAGTGCAGACAGGCCGAG | + |
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Preference number: 2 (lower is better) Translates to: SLLDASIHAQPHTLSCQTHVCRV*ECRQAE Trigger: CTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATG...TGTTTGACACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTCACCCCTTCCCTGCTTaGTCTCAGTATAATCATGTC | + |
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Preference number: 2 (lower is better) Translates to: TLGLTQQGQRGLPNLSSCHPFPA*SQYNHV Trigger: GACATGATTATACTGAGAGCAAGCAGGGAAGGGGTG...ACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCCACCATTCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTAGATCATCTATCACCTaGTATCACCCCTTCCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: QAHHSLLDASIHAQPHTLRSSIT*YHPFPA Trigger: AGCAGGGAAGGGGTGATAGCAGGTGATAGATGATCT...AAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGAATGGTGGGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| 3UTR-3UTR GCA 90 bp | TCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTTCGTGTCAAACACACCCCTTCCCTGCTTaGTCTCAGTATAATCATGTC | + |
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Preference number: 2 (lower is better) Translates to: SLLDASIHAQPHTLSCQTHPFPA*SQYNHV Trigger: GACATGATTATACTGAGAGCAAGCAGGGAAGGGGTG...TGTTTGACACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCCCTTATACAGAACCTGGCCTaGAGGAGGAAGGCCAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: MLETSHHEYHLPQAHHSLIQNLA*RRKARE Trigger: CTCTCTGGCCTTCCTCCTGCAGGCCAGGTTCTGTAT...AAGGGAATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| 3UTR-3UTR GCA 90 bp | CATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCCAGATGCTTCTATCCATaGCCAACCCCATACGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: HMLETSHHEYHLPQAHHSRCFYP*PTPYAF Trigger: GAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCT...GGAATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATCACCCCTTCCCTGCTTaGTCTCAGTATAATCATGTC | + |
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Preference number: 2 (lower is better) Translates to: VHMLETSHHEYHLPQAHHHPFPA*SQYNHV Trigger: GACATGATTATACTGAGAGCAAGCAGGGAAGGGGTG...ATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATAGATGCTTCTATCCATaGCCAACCCCATACGCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: VHMLETSHHEYHLPQAHHRCFYP*PTPYAF Trigger: GAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCT...ATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| 3UTR GCA 72 bp | TCAGGCCCACCATTCCCTTCTAGATGCTTCTATCCATaGCCAACCCCATACGCTTTCGTGTCAAACATGGCA | + |
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Preference number: 3 (lower is better) Translates to: SGPPFPSRCFYP*PTPYAFVSNMA Trigger: TGCCATGTTTGACACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGAATGGTGGGCCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| 3UTR GCA 72 bp | ATATCATTTACCTCAGGCCCACCATTCCCTTCTAGATaGTTCTATCCATGCCCAACCCCATACGCTTTCGTG | + |
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Preference number: 3 (lower is better) Translates to: ISFTSGPPFPSR*FYPCPTPYAFV Trigger: CACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGAATGGTGGGCCTGAGGTAAATGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | ACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTCTGTGGCCGGCCTGTTaGCTGGTGGGGTGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: TLGLTQQGQRGLPNLSSCLWPAC*LVGWPG Trigger: CCCTGGCCACCCCACCAGCCAACAGGCCGGCCACAG...ACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | GTCCCAACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTCCAAGGCCCTGGAGGTaGGCAAGGAAGCCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VPTLGLTQQGQRGLPNLSPRPWR*ARKPGS Trigger: GCTCCCAGGCTTCCTTGCCCACCTCCAGGGCCTTGG...ACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGTTGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CAGGCCCACCATTCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTGGCCGGCCTGTTGGCTaGTGGGGTGGCCAGGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: QAHHSLLDASIHAQPHTLGRPVG*WGGQGR Trigger: CCTACCCTGGCCACCCCACCAGCCAACAGGCCGGCC...AAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGAATGGTGGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | GCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCAGAGCTGGACTGCCTTaGGGCGGCCCGTCCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: ALSIIMSAESESADRPSTRAGLP*GGPSLA Trigger: CGCCAGGGACGGGCCGCCCCAAGGCAGTCCAGCTCT...GGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CAGGCCCACCATTCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTAGAGCTGGACTGCCTTaGGGCGGCCCGTCCCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QAHHSLLDASIHAQPHTLRAGLP*GGPSLA Trigger: CGCCAGGGACGGGCCGCCCCAAGGCAGTCCAGCTCT...AAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGAATGGTGGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTGCTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGCTGTGGCCGGCCTGTTaGCTGGTGGGGTGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: LLALSIIMSAESESADRPLWPAC*LVGWPG Trigger: CCCTGGCCACCCCACCAGCCAACAGGCCGGCCACAG...CGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CCAACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCAGGGAGCTCAGCGAGCTaGGCACAAAGGCAGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: PTLGLTQQGQRGLPNLSSGSSAS*AQRQVC Trigger: GCACACCTGCCTTTGTGCCCAGCTCGCTGAGCTCCC...TGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | ACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTGTGGGCAAGGAAGCCTaGGAGCTCAGCGAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLGLTQQGQRGLPNLSSCVGKEA*ELSELG Trigger: GCCCAGCTCGCTGAGCTCCCAGGCTTCCTTGCCCAC...ACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CCAACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCAGGGGCTGAGAGAGACTaGGCTGAAGCAGGCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: PTLGLTQQGQRGLPNLSSGAERD*AEAGRP Trigger: AGGTCTGCCTGCTTCAGCCCAGTCTCTCTCAGCCCC...TGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | GCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCCCAAGGCCCTGGAGGTaGGCAAGGAAGCCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ALSIIMSAESESADRPSTPRPWR*ARKPGS Trigger: GCTCCCAGGCTTCCTTGCCCACCTCCAGGGCCTTGG...GGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR GCA 90 bp | CCAACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCAGTTCAGCCCACAGTCTaGGCAAGTGTAGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PTLGLTQQGQRGLPNLSSVQPTV*ASVAAR Trigger: CCTGGCTGCTACACTTGCGCAGACTGTGGGCTGAAC...TGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTGCGGCCTGTTGGCTGGTaGGGTGGCCAGGGTAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSIIMSAESESADRPSTLRPVGW*GGQGRS Trigger: TGACCTACCCTGGCCACCCCACCAGCCAACAGGCCG...CAAGGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCCGGCCTGTTGGCTGGTaGGGTGGCCAGGGTAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LALSIIMSAESESADRPSRPVGW*GGQGRS Trigger: TGACCTACCCTGGCCACCCCACCAGCCAACAGGCCG...GCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTGGGCCGTCCTGGGGAATaGAGCAGCACCCTCACTGCG | + |
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Preference number: 4 (lower is better) Translates to: LSIIMSAESESADRPSTLGRPGE*SSTLTA Trigger: CGCAGTGAGGGTGCTGCTCCATTCCCCAGGACGGCC...CAAGGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | TCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTAGAGCTGGACTGCCTTaGGGCGGCCCGTCCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SPSKDKGDSPTLVHVRSSRAGLP*GGPSLA Trigger: CGCCAGGGACGGGCCGCCCCAAGGCAGTCCAGCTCT...AGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTGGTGGGCAAGGAAGCCTaGGAGCTCAGCGAGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LSIIMSAESESADRPSTLVGKEA*ELSELG Trigger: GCCCAGCTCGCTGAGCTCCCAGGCTTCCTTGCCCAC...CAAGGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | AGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTGAGGGTGGGCAAGGAAGCCTaGGAGCTCAGCGAGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SIIMSAESESADRPSTLRVGKEA*ELSELG Trigger: GCCCAGCTCGCTGAGCTCCCAGGCTTCCTTGCCCAC...CCTCAAGGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | GCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCAGTGGGCAAGGAAGCCTaGGAGCTCAGCGAGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ASPSKDKGDSPTLVHVRSVGKEA*ELSELG Trigger: GCCCAGCTCGCTGAGCTCCCAGGCTTCCTTGCCCAC...TGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | AGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTGAGGCCAAGGCCCTGGAGGTaGGCAAGGAAGCCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SIIMSAESESADRPSTLRPRPWR*ARKPGS Trigger: GCTCCCAGGCTTCCTTGCCCACCTCCAGGGCCTTGG...CCTCAAGGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | GCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCGGTGTGGAGCTTGGGTaGAGTGGCCAAGGCCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ALSIIMSAESESADRPSTGVELG*SGQGPG Trigger: TCCAGGGCCTTGGCCACTCCACCCAAGCTCCACACC...GGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR GCA 90 bp | ACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTGCACAAAGGCAGGTGTaGCACCTCTCTCCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TLGLTQQGQRGLPNLSSCAQRQV*HLSPQP Trigger: AGGCTGAGGAGAGAGGTGGCACACCTGCCTTTGTGC...ACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR GCA 90 bp | ACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTGTTCAGCCCACAGTCTaGGCAAGTGTAGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TLGLTQQGQRGLPNLSSCVQPTV*ASVAAR Trigger: CCTGGCTGCTACACTTGCGCAGACTGTGGGCTGAAC...ACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | TCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTCACTGCGGAGTCGCTTaGGCTGCTGTGGCCGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SPSKDKGDSPTLVHVRSSHCGVA*AAVAGL Trigger: CAGGCCGGCCACAGCAGCCCAAGCGACTCCGCAGTG...AGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | AGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTATCACCGGGGCGGCCCGTCCCTaGCGGTTCTCCTGCAGCATC | + |
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Preference number: 4 (lower is better) Translates to: SKDKGDSPTLVHVRSSITGAARP*RFSCSI Trigger: GATGCTGCAGGAGAACCGCCAGGGACGGGCCGCCCC...GGTGATAGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTGGGGAGCTCAGCGAGCTaGGCACAAAGGCAGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LSIIMSAESESADRPSTLGSSAS*AQRQVC Trigger: GCACACCTGCCTTTGTGCCCAGCTCGCTGAGCTCCC...CAAGGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCGGGAGCTCAGCGAGCTaGGCACAAAGGCAGGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LALSIIMSAESESADRPSGSSAS*AQRQVC Trigger: GCACACCTGCCTTTGTGCCCAGCTCGCTGAGCTCCC...GCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | AGGAAGGCCAGAGAGAGTGGAACTGTCCTTAGCACTAGCAACCTGACATTAGTCCCAAGGCCCTGGAGGTaGGCAAGGAAGCCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RKARESGTVLSTSNLTLVPRPWR*ARKPGS Trigger: GCTCCCAGGCTTCCTTGCCCACCTCCAGGGCCTTGG...GACTAATGTCAGGTTGCTAGTGCTAAGGACAGTTCCACTCTCTCTGGCCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTGCTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGGAGTGGCCAAGGCCCTaGAGGTGGGCAAGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LLALSIIMSAESESADRPEWPRP*RWARKP Trigger: AGGCTTCCTTGCCCACCTCCAGGGCCTTGGCCACTC...CGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR GCA 90 bp | GCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCGTTCAGCCCACAGTCTaGGCAAGTGTAGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ALSIIMSAESESADRPSTVQPTV*ASVAAR Trigger: CCTGGCTGCTACACTTGCGCAGACTGTGGGCTGAAC...GGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | GCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCGAAGCCCCAAGGTGCTaGTCCTGCCACATCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALSIIMSAESESADRPSTEAPRC*SCHIHS Trigger: ACTGTGGATGTGGCAGGACCAGCACCTTGGGGCTTC...GGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | TCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTTGGGCTGGTAGGGGGTaGGGTGGAGAAGGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSKDKGDSPTLVHVRSSWAGRG*GGEGAA Trigger: TGCAGCCCCTTCTCCACCCCACCCCCTACCAGCCCA...AGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGCCAGAGAGAGTGGAACTGTCCTTAGCACTAGCAACCTGACATTAGTCGAGTGGCCAAGGCCCTaGAGGTGGGCAAGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKARESGTVLSTSNLTLVEWPRP*RWARKP Trigger: AGGCTTCCTTGCCCACCTCCAGGGCCTTGGCCACTC...GACTAATGTCAGGTTGCTAGTGCTAAGGACAGTTCCACTCTCTCTGGCCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGGCCCTGGAATCTGGTTaGCAGCACTTCCAAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLALSIIMSAESESADRPALESG*QHFQGA Trigger: GGCTCCTTGGAAGTGCTGGCAACCAGATTCCAGGGC...CGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCGCACAAAGGCAGGTGTaGCACCTCTCTCCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LALSIIMSAESESADRPSAQRQV*HLSPQP Trigger: AGGCTGAGGAGAGAGGTGGCACACCTGCCTTTGTGC...GCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGGTTCAGCCCACAGTCTaGGCAAGTGTAGCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLALSIIMSAESESADRPVQPTV*ASVAAR Trigger: CCTGGCTGCTACACTTGCGCAGACTGTGGGCTGAAC...CGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | CTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTGCGCAGTACAACTCATTaGCCACCCAGAAGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LSIIMSAESESADRPSTLRSTTH*PPRSGR Trigger: GCGGCCACTTCTGGGTGGGCAATGAGTTGTACTGCG...CAAGGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCACGCAGTACAACTCATTaGCCACCCAGAAGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ASPSKDKGDSPTLVHVRSRSTTH*PPRSGR Trigger: GCGGCCACTTCTGGGTGGGCAATGAGTTGTACTGCG...TGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR GCA 90 bp | CCACCATTCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTTCGTGCGCAGTACAACTCATTaGCCACCCAGAAGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PPFPSRCFYPCPTPYAFVRSTTH*PPRSGR Trigger: GCGGCCACTTCTGGGTGGGCAATGAGTTGTACTGCG...CACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGAATGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | TCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTAGGAGCCCTCCCCATTaGTCTGCCCAGGAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPSKDKGDSPTLVHVRSSRSPPH*SAQERL Trigger: CAGCCTCTCCTGGGCAGACCAATGGGGAGGGCTCCT...AGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | AGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTGAGGAAGCAGGCAGACCTCTaGGAAGACTGGCTGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SIIMSAESESADRPSTLRKQADL*EDWLSR Trigger: CCGTGACAGCCAGTCTTCCCAGAGGTCTGCCTGCTT...CCTCAAGGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTTAGAAAGGGCAACTaGGCTGGTAGGGGGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALSIIMSAESESADRPSTFRKGN*AGRGWG Trigger: ACCCCACCCCCTACCAGCCCAGTTGCCCTTTCTAAA...GGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | TCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTTCGTGTCAAACAGAGTGGCCAAGGCCCTaGAGGTGGGCAAGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLDASIHAQPHTLSCQTEWPRP*RWARKP Trigger: AGGCTTCCTTGCCCACCTCCAGGGCCTTGGCCACTC...TGTTTGACACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | TCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTTCGGAAGCCCCAAGGTaGTGGTCCTGCCACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSKDKGDSPTLVHVRSSSEAPR*WSCHIH Trigger: GTGGATGTGGCAGGACCAGCACCTTGGGGCTTCCGA...AGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGCCAGAGAGAGTGGAACTGTCCTTAGCACTAGCAACCTGACATTAGTCGCCCTGGAATCTGGTTaGCAGCACTTCCAAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKARESGTVLSTSNLTLVALESG*QHFQGA Trigger: GGCTCCTTGGAAGTGCTGGCAACCAGATTCCAGGGC...GACTAATGTCAGGTTGCTAGTGCTAAGGACAGTTCCACTCTCTCTGGCCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTGCTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGTGTCGGATCTTGCTTTaGGCCTCCGCGTGTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LLALSIIMSAESESADRPCRILL*ASACSM Trigger: CATGCTACACGCGGAGGCCCAAAGCAAGATCCGACA...CGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | ATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCCCTTAGAGCTGGACTGCCTTaGGGCGGCCCGTCCCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MLETSHHEYHLPQAHHSLRAGLP*GGPSLA Trigger: CGCCAGGGACGGGCCGCCCCAAGGCAGTCCAGCTCT...AAGGGAATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTATGGTGTGGAGCTTGGGTaGAGTGGCCAAGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQQGQRGLPNLSSCKIIYGVELG*SGQGPG Trigger: TCCAGGGCCTTGGCCACTCCACCCAAGCTCCACACC...ATAGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTCTCCTGCAGCATCTTaGACACCTCTGAGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSIIMSAESESADRPSTSPAAS*TPLSLP Trigger: AGGAAGACTCAGAGGTGTTCAAGATGCTGCAGGAGA...GGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTTCGTGTCAAACAGCACAAAGGCAGGTGTaGCACCTCTCTCCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLLDASIHAQPHTLSCQTAQRQV*HLSPQP Trigger: AGGCTGAGGAGAGAGGTGGCACACCTGCCTTTGTGC...TGTTTGACACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTATGGGGCTGAGAGAGACTaGGCTGAAGCAGGCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TQQGQRGLPNLSSCKIIYGAERD*AEAGRP Trigger: AGGTCTGCCTGCTTCAGCCCAGTCTCTCTCAGCCCC...ATAGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | GTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATGGCCGGCCTGTTGGCTaGTGGGGTGGCCAGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHMLETSHHEYHLPQAHHGRPVG*WGGQGR Trigger: CCTACCCTGGCCACCCCACCAGCCAACAGGCCGGCC...ATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | AGAGTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACGGGGCGGCCCGTCCCTaGCGGTTCTCCTGCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: RVHMLETSHHEYHLPQAHGAARP*RFSCSI Trigger: GATGCTGCAGGAGAACCGCCAGGGACGGGCCGCCCC...GTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR GCA 90 bp | AGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTATCACCGCACAAAGGCAGGTGTaGCACCTCTCTCCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKDKGDSPTLVHVRSSITAQRQV*HLSPQP Trigger: AGGCTGAGGAGAGAGGTGGCACACCTGCCTTTGTGC...GGTGATAGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACAATGATGGGTGTGTaGAAATCTCTGCCCCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LALSIIMSAESESADRPSTMMGV*KSLPPL Trigger: TAGCGGGGGCAGAGATTTCCACACACCCATCATTGT...GCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | CATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCCTGGGCTGGTAGGGGGTaGGGTGGAGAAGGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HMLETSHHEYHLPQAHHSWAGRG*GGEGAA Trigger: TGCAGCCCCTTCTCCACCCCACCCCCTACCAGCCCA...GGAATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | TCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTTCGTGTCAAACATTTAGAAAGGGCAACTaGGCTGGTAGGGGGTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLLDASIHAQPHTLSCQTFRKGN*AGRGWG Trigger: ACCCCACCCCCTACCAGCCCAGTTGCCCTTTCTAAA...TGTTTGACACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | AGAGTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCACTGCGGAGTCGCTTaGGCTGCTGTGGCCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVHMLETSHHEYHLPQAHHCGVA*AAVAGL Trigger: CAGGCCGGCCACAGCAGCCCAAGCGACTCCGCAGTG...GTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR TCA 90 bp | CTGCTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGCATCTTGAACACCTCTaGGTCTTCCTCCAGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLALSIIMSAESESADRPHLEHL*VFLQIQ Trigger: TTGGATCTGGAGGAAGACTCAGAGGTGTTCAAGATG...CGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAGCAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR GCA 90 bp | AGAGTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCGAAAAGAGCTGGACTaGCTTGGGGCGGCCCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RVHMLETSHHEYHLPQAHRKELD*LGAARP Trigger: GGGACGGGCCGCCCCAAGGCAGTCCAGCTCTTTTCG...GTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | ATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCCCTTAGGAGCCCTCCCCATTaGTCTGCCCAGGAGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLETSHHEYHLPQAHHSLRSPPH*SAQERL Trigger: CAGCCTCTCCTGGGCAGACCAATGGGGAGGGCTCCT...AAGGGAATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTTGGCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTGAGTGTGTCAGACTCTaGAAACTACAGCCAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: TLGLTQQGQRGLPNLSSCECVRL*KLQPII Trigger: TATGATTGGCTGTAGTTTCCAGAGTCTGACACACTC...ACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGCCAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACGGCCGTCCTGGGGAATaGAGCAGCACCCTCACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RVHMLETSHHEYHLPQAHGRPGE*SSTLTA Trigger: CGCAGTGAGGGTGCTGCTCCATTCCCCAGGACGGCC...GTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
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| CDS-3UTR CCA 90 bp | ATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCCCTTGGTGTGGAGCTTGGGTaGAGTGGCCAAGGCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MLETSHHEYHLPQAHHSLGVELG*SGQGPG Trigger: TCCAGGGCCTTGGCCACTCCACCCAAGCTCCACACC...AAGGGAATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACGAGTGGCCAAGGCCCTaGAGGTGGGCAAGGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVHMLETSHHEYHLPQAHEWPRP*RWARKP Trigger: AGGCTTCCTTGCCCACCTCCAGGGCCTTGGCCACTC...GTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | GTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCGGAAGCCCCAAGGTaGTGGTCCTGCCACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VHMLETSHHEYHLPQAHHSEAPR*WSCHIH Trigger: GTGGATGTGGCAGGACCAGCACCTTGGGGCTTCCGA...ATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | CATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCCAAGCAGGCAGACCTCTaGGAAGACTGGCTGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: HMLETSHHEYHLPQAHHSKQADL*EDWLSR Trigger: CCGTGACAGCCAGTCTTCCCAGAGGTCTGCCTGCTT...GGAATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | GCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCAGAGTGTGTCAGACTCTaGAAACTACAGCCAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: ASPSKDKGDSPTLVHVRSECVRL*KLQPII Trigger: TATGATTGGCTGTAGTTTCCAGAGTCTGACACACTC...TGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTATCATCTTGAACACCTCTaGGTCTTCCTCCAGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TQQGQRGLPNLSSCKIIYHLEHL*VFLQIQ Trigger: TTGGATCTGGAGGAAGACTCAGAGGTGTTCAAGATG...ATAGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCGCAGTACAACTCATTaGCCACCCAGAAGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RVHMLETSHHEYHLPQAHRSTTH*PPRSGR Trigger: GCGGCCACTTCTGGGTGGGCAATGAGTTGTACTGCG...GTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACGAAGCCCCAAGGTGCTaGTCCTGCCACATCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVHMLETSHHEYHLPQAHEAPRC*SCHIHS Trigger: ACTGTGGATGTGGCAGGACCAGCACCTTGGGGCTTC...GTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR TCA 90 bp | CATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCCTCTCCTGCAGCATCTTaGACACCTCTGAGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HMLETSHHEYHLPQAHHSSPAAS*TPLSLP Trigger: AGGAAGACTCAGAGGTGTTCAAGATGCTGCAGGAGA...GGAATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CCA 90 bp | GTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATACAATGATGGGTGTGTaGAAATCTCTGCCCCCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VHMLETSHHEYHLPQAHHTMMGV*KSLPPL Trigger: TAGCGGGGGCAGAGATTTCCACACACCCATCATTGT...ATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS GCA 90 bp | CCTAGGGCTGGAGGGCCGTCCTGGGGAATGGAGCAGCACCCTCACTaGGGAGTCGCTTGGGCTGCTGTGGCCGGCCTGTTGGCTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRAGGPSWGMEQHPH*GVAWAAVAGLLAGG Trigger: CCCACCAGCCAACAGGCCGGCCACAGCAGCCCAAGCGACTCCGCAGTGAGGGTGCTGCTCCATTCCCCAGGACGGCCCTCCAGCCCTAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 90 bp | CCCTCACTGCGGAGTCGCTTGGGCTGCTGTGGCCGGCCTGTTGGCTaGTGGGGTGGCCAGGGTAGGTCAAGTGGTGAGCAGCAGCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSLRSRLGCCGRPVG*WGGQGRSSGEQQQG Trigger: GCCTTGCTGCTGCTCACCACTTGACCTACCCTGGCCACCCCACCAGCCAACAGGCCGGCCACAGCAGCCCAAGCGACTCCGCAGTGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 90 bp | TCACTGCGGAGTCGCTTGGGCTGCTGTGGCCGGCCTGTTGGCTGGTaGGGTGGCCAGGGTAGGTCAAGTGGTGAGCAGCAGCAAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLRSRLGCCGRPVGW*GGQGRSSGEQQQGL Trigger: CAGGCCTTGCTGCTGCTCACCACTTGACCTACCCTGGCCACCCCACCAGCCAACAGGCCGGCCACAGCAGCCCAAGCGACTCCGCAGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS GCA 90 bp | TCCCCATTGGTCTGCCCAGGAGAGGCTGTTTGGGACCGGTCCAGCTaGAGTCTTAGGGGTGAGGCGCTCTGTCGGATCTTGCTTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPLVCPGEAVWDRSS*SLRGEALCRILLWA Trigger: GGCCCAAAGCAAGATCCGACAGAGCGCCTCACCCCTAAGACTGCAGCTGGACCGGTCCCAAACAGCCTCTCCTGGGCAGACCAATGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS GCA 90 bp | AGACTGGCTGTCACGGTGTGTCCTCAGGGAGCCCTGGAATCTGGTTaGCAGCACTTCCAAGGAGCCCTCCCCATTGGTCTGCCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLAVTVCPQGALESG*QHFQGALPIGLPRR Trigger: TCTCCTGGGCAGACCAATGGGGAGGGCTCCTTGGAAGTGCTGGCAACCAGATTCCAGGGCTCCCTGAGGACACACCGTGACAGCCAGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS GCA 90 bp | ACCGGTCCAGCTGCAGTCTTAGGGGTGAGGCGCTCTGTCGGATCTTaGTTTGGGCCTCCGCGTGTAGCATGTTCTCTGCACTCTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TGPAAVLGVRRSVGS*FGPPRVACSLHSVH Trigger: ATGGACAGAGTGCAGAGAACATGCTACACGCGGAGGCCCAAAGCAAGATCCGACAGAGCGCCTCACCCCTAAGACTGCAGCTGGACCGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS GCA 90 bp | AAAGAGCTGGACTGCCTTGGGGCGGCCCGTCCCTGGCGGTTCTCCTaGAGCATCTTGAACACCTCTGAGTCTTCCTCCAGATCCAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: KELDCLGAARPWRFS*SILNTSESSSRSKL Trigger: CAGTTTGGATCTGGAGGAAGACTCAGAGGTGTTCAAGATGCTGCAGGAGAACCGCCAGGGACGGGCCGCCCCAAGGCAGTCCAGCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS GCA 90 bp | AAAGAGCTGGACTGCCTTGGGGCGGCCCGTCCCTGGCGGTTCTCCTaGAGCATCTTGAACACCTCTGAGTCTTCCTCCAGATCCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: KELDCLGAARPWRFS*SILNTSESSSRSKP Trigger: TGGTTTGGATCTGGAGGAAGACTCAGAGGTGTTCAAGATGCTGCAGGAGAACCGCCAGGGACGGGCCGCCCCAAGGCAGTCCAGCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125300.3 |
||
| CDS CCA 90 bp | TGTAAGAGTCGAAAAGAGCTGGACTGCCTTGGGGCGGCCCGTCCCTaGCGGTTCTCCTGCAGCATCTTGAACACCTCTGAGTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CKSRKELDCLGAARP*RFSCSILNTSESSS Trigger: GGAGGAAGACTCAGAGGTGTTCAAGATGCTGCAGGAGAACCGCCAGGGACGGGCCGCCCCAAGGCAGTCCAGCTCTTTTCGACTCTTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000125300.3 ENSMUST00000153735.8 |
||
| CDS GCA 90 bp | CTGTCCATTGATGGCCACAATGATGTCGCCAGGCCGGAGATCAGCTaGTTCAGCCTTGCCCCGCTCTGTGACCTTGGTCACAATGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSIDGHNDVARPEIS*FSLAPLCDLGHNDG Trigger: CCCATCATTGTGACCAAGGTCACAGAGCGGGGCAAGGCTGAAGCAGCTGATCTCCGGCCTGGCGACATCATTGTGGCCATCAATGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 90 bp | TCCAGCTGCAGTCTTAGGGGTGAGGCGCTCTGTCGGATCTTGCTTTaGGCCTCCGCGTGTAGCATGTTCTCTGCACTCTGTCCATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSCSLRGEALCRILL*ASACSMFSALCPLM Trigger: CATCAATGGACAGAGTGCAGAGAACATGCTACACGCGGAGGCCCAAAGCAAGATCCGACAGAGCGCCTCACCCCTAAGACTGCAGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 90 bp | GGTGGGGTGGCCAGGGTAGGTCAAGTGGTGAGCAGCAGCAAGGCCTaGAGAGTGTGTCAGACTCTGGAAACTACAGCCAATCATATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGVARVGQVVSSSKA*RVCQTLETTANHIL Trigger: GAGGATATGATTGGCTGTAGTTTCCAGAGTCTGACACACTCTCCAGGCCTTGCTGCTGCTCACCACTTGACCTACCCTGGCCACCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | CTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCAAGGAGCCCTCCCCATaGGTCTGCCCAGGAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LALSIIMSAESESADRPSKEPSP*VCPGEA Trigger: AGCCTCTCCTGGGCAGACCAATGGGGAGGGCTCCTT...GCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTTCGTGTCAAACAAAGGAGCCCTCCCCATaGGTCTGCCCAGGAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLDASIHAQPHTLSCQTKEPSP*VCPGEA Trigger: AGCCTCTCCTGGGCAGACCAATGGGGAGGGCTCCTT...TGTTTGACACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | CCACCATTCCCTTCTAGATGCTTCTATCCATGCCCAACCCCATACGCTTTCGTGAGCCCTGGAATCTGGTaGCCAGCACTTCCAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PPFPSRCFYPCPTPYAFVSPGIW*PALPRS Trigger: GCTCCTTGGAAGTGCTGGCAACCAGATTCCAGGGCT...CACGAAAGCGTATGGGGTTGGGCATGGATAGAAGCATCTAGAAGGGAATGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | ATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATTCCCTTGCTGTGGCCGGCCTGTaGGCTGGTGGGGTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MLETSHHEYHLPQAHHSLAVAGL*AGGVAR Trigger: CCTGGCCACCCCACCAGCCAACAGGCCGGCCACAGC...AAGGGAATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | CTTGCTCTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCTCGCAGTACAACTCATaGCCCACCCAGAAGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LALSIIMSAESESADRPSSQYNS*PTQKWP Trigger: CGGCCACTTCTGGGTGGGCAATGAGTTGTACTGCGA...GCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAGAGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGTATAATCATGTCTGCAGAGTCTGAGAGTGCAGACAGGCCGAGCACCTTGTCGCAGTACAACTCATaGCCCACCCAGAAGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LSIIMSAESESADRPSTLSQYNS*PTQKWP Trigger: CGGCCACTTCTGGGTGGGCAATGAGTTGTACTGCGA...CAAGGTGCTCGGCCTGTCTGCACTCTCAGACTCTGCAGACATGATTATACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022681.11 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | TCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATCTTCGCAGTACAACTCATaGCCCACCCAGAAGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SPSKDKGDSPTLVHVRSSSQYNS*PTQKWP Trigger: CGGCCACTTCTGGGTGGGCAATGAGTTGTACTGCGA...AGATGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | GCCTCACCCAGCAAGGACAAAGGGGACTCCCCAACCTTAGTTCATGTAAGATCATTCTCCTGCAGCATCTaGAACACCTCTGAGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASPSKDKGDSPTLVHVRSFSCSI*NTSESS Trigger: GGAAGACTCAGAGGTGTTCAAGATGCTGCAGGAGAA...TGATCTTACATGAACTAAGGTTGGGGAGTCCCCTTTGTCCTTGCTGGGTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGCCAGAGAGAGTGGAACTGTCCTTAGCACTAGCAACCTGACATTAGTCTTCTCCTGCAGCATCTaGAACACCTCTGAGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKARESGTVLSTSNLTLVFSCSI*NTSESS Trigger: GGAAGACTCAGAGGTGTTCAAGATGCTGCAGGAGAA...GACTAATGTCAGGTTGCTAGTGCTAAGGACAGTTCCACTCTCTCTGGCCTTCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | GTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACCATAGCCCTGGAATCTGGTaGCCAGCACTTCCAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHMLETSHHEYHLPQAHHSPGIW*PALPRS Trigger: GCTCCTTGGAAGTGCTGGCAACCAGATTCCAGGGCT...ATGGTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCATATGTTAGAAACTTCACACCATGAATATCATTTACCTCAGGCCCACTCGCAGTACAACTCATaGCCCACCCAGAAGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RVHMLETSHHEYHLPQAHSQYNS*PTQKWP Trigger: CGGCCACTTCTGGGTGGGCAATGAGTTGTACTGCGA...GTGGGCCTGAGGTAAATGATATTCATGGTGTGAAGTTTCTAACATATGAACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022681.11 ENSMUST00000153735.8 |
||
| CDS GCA 72 bp | GGAGGGCCGTCCTGGGGAATGGAGCAGCACCCTCACTaGGGAGTCGCTTGGGCTGCTGTGGCCGGCCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGPSWGMEQHPH*GVAWAAVAGLL Trigger: CAACAGGCCGGCCACAGCAGCCCAAGCGACTCCGCAGTGAGGGTGCTGCTCCATTCCCCAGGACGGCCCTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS GCA 72 bp | AATGGAGCAGCACCCTCACTGCGGAGTCGCTTGGGCTaGTGTGGCCGGCCTGTTGGCTGGTGGGGTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: NGAAPSLRSRLG*CGRPVGWWGGQ Trigger: CTGGCCACCCCACCAGCCAACAGGCCGGCCACAGCAGCCCAAGCGACTCCGCAGTGAGGGTGCTGCTCCATT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 72 bp | CGGAGTCGCTTGGGCTGCTGTGGCCGGCCTGTTGGCTaGTGGGGTGGCCAGGGTAGGTCAAGTGGTGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSRLGCCGRPVG*WGGQGRSSGEQ Trigger: CTGCTCACCACTTGACCTACCCTGGCCACCCCACCAGCCAACAGGCCGGCCACAGCAGCCCAAGCGACTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 72 bp | TGGGGAATGGAGCAGCACCCTCACTGCGGAGTCGCTTaGGCTGCTGTGGCCGGCCTGTTGGCTGGTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: WGMEQHPHCGVA*AAVAGLLAGGV Trigger: CACCCCACCAGCCAACAGGCCGGCCACAGCAGCCCAAGCGACTCCGCAGTGAGGGTGCTGCTCCATTCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CAA 72 bp | CACTGCGGAGTCGCTTGGGCTGCTGTGGCCGGCCTGTaGGCTGGTGGGGTGGCCAGGGTAGGTCAAGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: HCGVAWAAVAGL*AGGVARVGQVV Trigger: CACCACTTGACCTACCCTGGCCACCCCACCAGCCAACAGGCCGGCCACAGCAGCCCAAGCGACTCCGCAGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 72 bp | AGTCGCTTGGGCTGCTGTGGCCGGCCTGTTGGCTGGTaGGGTGGCCAGGGTAGGTCAAGTGGTGAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRLGCCGRPVGW*GGQGRSSGEQQ Trigger: CTGCTGCTCACCACTTGACCTACCCTGGCCACCCCACCAGCCAACAGGCCGGCCACAGCAGCCCAAGCGACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 72 bp | CTGCTGAACCTAGGGCTGGAGGGCCGTCCTGGGGAATaGAGCAGCACCCTCACTGCGGAGTCGCTTGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLNLGLEGRPGE*SSTLTAESLGL Trigger: CAGCCCAAGCGACTCCGCAGTGAGGGTGCTGCTCCATTCCCCAGGACGGCCCTCCAGCCCTAGGTTCAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS GCA 72 bp | GTCTGCCCAGGAGAGGCTGTTTGGGACCGGTCCAGCTaGAGTCTTAGGGGTGAGGCGCTCTGTCGGATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VCPGEAVWDRSS*SLRGEALCRIL Trigger: CAAGATCCGACAGAGCGCCTCACCCCTAAGACTGCAGCTGGACCGGTCCCAAACAGCCTCTCCTGGGCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS GCA 72 bp | GACTGCCTTGGGGCGGCCCGTCCCTGGCGGTTCTCCTaGAGCATCTTGAACACCTCTGAGTCTTCCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DCLGAARPWRFS*SILNTSESSSR Trigger: TCTGGAGGAAGACTCAGAGGTGTTCAAGATGCTGCAGGAGAACCGCCAGGGACGGGCCGCCCCAAGGCAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000125300.3 ENSMUST00000153735.8 |
||
| CDS CCA 72 bp | CGAAAAGAGCTGGACTGCCTTGGGGCGGCCCGTCCCTaGCGGTTCTCCTGCAGCATCTTGAACACCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RKELDCLGAARP*RFSCSILNTSE Trigger: CTCAGAGGTGTTCAAGATGCTGCAGGAGAACCGCCAGGGACGGGCCGCCCCAAGGCAGTCCAGCTCTTTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000125300.3 ENSMUST00000153735.8 |
||
| CDS CAA 72 bp | AGGCTTCCTGTAAGAGTCGAAAAGAGCTGGACTGCCTaGGGGCGGCCCGTCCCTGGCGGTTCTCCTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RLPVRVEKSWTA*GRPVPGGSPAA Trigger: TGCTGCAGGAGAACCGCCAGGGACGGGCCGCCCCAAGGCAGTCCAGCTCTTTTCGACTCTTACAGGAAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022681.11 ENSMUST00000125300.3 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS GCA 72 bp | GATGGCCACAATGATGTCGCCAGGCCGGAGATCAGCTaGTTCAGCCTTGCCCCGCTCTGTGACCTTGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: DGHNDVARPEIS*FSLAPLCDLGH Trigger: GTGACCAAGGTCACAGAGCGGGGCAAGGCTGAAGCAGCTGATCTCCGGCCTGGCGACATCATTGTGGCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS GCA 72 bp | GTCACGGTGTGTCCTCAGGGAGCCCTGGAATCTGGTTaGCAGCACTTCCAAGGAGCCCTCCCCATTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VTVCPQGALESG*QHFQGALPIGL Trigger: CAGACCAATGGGGAGGGCTCCTTGGAAGTGCTGGCAACCAGATTCCAGGGCTCCCTGAGGACACACCGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 72 bp | GAAGACTGGCTGTCACGGTGTGTCCTCAGGGAGCCCTaGAATCTGGTTGCCAGCACTTCCAAGGAGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EDWLSRCVLREP*NLVASTSKEPS Trigger: GGAGGGCTCCTTGGAAGTGCTGGCAACCAGATTCCAGGGCTCCCTGAGGACACACCGTGACAGCCAGTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 72 bp | GAGACTGGGCTGAAGCAGGCAGACCTCTGGGAAGACTaGCTGTCACGGTGTGTCCTCAGGGAGCCCTGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ETGLKQADLWED*LSRCVLREPWN Trigger: ATTCCAGGGCTCCCTGAGGACACACCGTGACAGCCAGTCTTCCCAGAGGTCTGCCTGCTTCAGCCCAGTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 72 bp | GGGTGTCGGTACCTCCCCTCCTGGATGCGGACCGCCTaGTTCGAGATGTTGACGCTGCATTTCTCACAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GCRYLPSWMRTA*FEMLTLHFSQV Trigger: CACCTGTGAGAAATGCAGCGTCAACATCTCGAACCAGGCGGTCCGCATCCAGGAGGGGAGGTACCGACACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022681.11 ENSMUST00000125300.3 ENSMUST00000127836.8 ENSMUST00000129174.8 ENSMUST00000153735.8 |
||
| CDS CAA 90 bp | GACCGGTCCAGCTGCAGTCTTAGGGGTGAGGCGCTCTGTCGGATCTaGCTTTGGGCCTCCGCGTGTAGCATGTTCTCTGCACTCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: DRSSCSLRGEALCRI*LWASACSMFSALCP Trigger: TGGACAGAGTGCAGAGAACATGCTACACGCGGAGGCCCAAAGCAAGATCCGACAGAGCGCCTCACCCCTAAGACTGCAGCTGGACCGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CAA 72 bp | ATGATGTCGCCAGGCCGGAGATCAGCTGCTTCAGCCTaGCCCCGCTCTGTGACCTTGGTCACAATGATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: MMSPGRRSAASA*PRSVTLVTMMG Trigger: ACCCATCATTGTGACCAAGGTCACAGAGCGGGGCAAGGCTGAAGCAGCTGATCTCCGGCCTGGCGACATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CAA 90 bp | ATGGCCACAATGATGTCGCCAGGCCGGAGATCAGCTGCTTCAGCCTaGCCCCGCTCTGTGACCTTGGTCACAATGATGGGTGTGTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MATMMSPGRRSAASA*PRSVTLVTMMGVWK Trigger: TTTCCACACACCCATCATTGTGACCAAGGTCACAGAGCGGGGCAAGGCTGAAGCAGCTGATCTCCGGCCTGGCGACATCATTGTGGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CCA 72 bp | AGTCTTAGGGGTGAGGCGCTCTGTCGGATCTTGCTTTaGGCCTCCGCGTGTAGCATGTTCTCTGCACTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLRGEALCRILL*ASACSMFSALC Trigger: ACAGAGTGCAGAGAACATGCTACACGCGGAGGCCCAAAGCAAGATCCGACAGAGCGCCTCACCCCTAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
||
| CDS CAA 72 bp | GCCTCCGCGTGTAGCATGTTCTCTGCACTCTGTCCATaGATGGCCACAATGATGTCGCCAGGCCGGAGATCA | + |
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Preference number: 6 (lower is better) Translates to: ASACSMFSALCP*MATMMSPGRRS Trigger: TGATCTCCGGCCTGGCGACATCATTGTGGCCATCAATGGACAGAGTGCAGAGAACATGCTACACGCGGAGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
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| CDS CAA 90 bp | TTGCTTTGGGCCTCCGCGTGTAGCATGTTCTCTGCACTCTGTCCATaGATGGCCACAATGATGTCGCCAGGCCGGAGATCAGCTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LLWASACSMFSALCP*MATMMSPGRRSAAS Trigger: TGAAGCAGCTGATCTCCGGCCTGGCGACATCATTGTGGCCATCAATGGACAGAGTGCAGAGAACATGCTACACGCGGAGGCCCAAAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
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| CDS CCA 72 bp | GCCAGGGTAGGTCAAGTGGTGAGCAGCAGCAAGGCCTaGAGAGTGTGTCAGACTCTGGAAACTACAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: ARVGQVVSSSKA*RVCQTLETTAN Trigger: ATTGGCTGTAGTTTCCAGAGTCTGACACACTCTCCAGGCCTTGCTGCTGCTCACCACTTGACCTACCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
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| CDS CAA 72 bp | AGATCAGCTGCTTCAGCCTTGCCCCGCTCTGTGACCTaGGTCACAATGATGGGTGTGTGGAAATCTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: RSAASALPRSVT*VTMMGVWKSLP Trigger: GGGCAGAGATTTCCACACACCCATCATTGTGACCAAGGTCACAGAGCGGGGCAAGGCTGAAGCAGCTGATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022681.11 ENSMUST00000143393.2 ENSMUST00000153735.8 |
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