Pregenerated sensors for PDK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019577Ensembl transcript IDs: ENSMUST00000019721.7
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCAAAGGAGAAGCAGGACACCTGTTATCCCCTGGAGCCCTGCCCTaGCTTCTCCCGGGTCATCCAACCAAGCTCTGTCCCTCATCAGGT | + |
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Preference number: 1 (lower is better) Translates to: AKGEAGHLLSPGALP*LLPGHPTKLCPSSG Trigger: ACCTGATGAGGGACAGAGCTTGGTTGGATGACCCGGGAGAAGTCAGGGCAGGGCTCCAGGGGATAACAGGTGTCCTGCTTCTCCTTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR GCA 90 bp | TTCACCCAAGCCTCGGCACCAGCCAGAAGGCACTGGCTTTTTGAGTaGAAACATAAAAAGCTGCATGATACTGGAGCTGTCTTGACAGAG | + |
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Preference number: 1 (lower is better) Translates to: FTQASAPARRHWLFE*KHKKLHDTGAVLTE Trigger: CTCTGTCAAGACAGCTCCAGTATCATGCAGCTTTTTATGTTTGCACTCAAAAAGCCAGTGCCTTCTGGCTGGTGCCGAGGCTTGGGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR TCA 90 bp | ACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACACTaGAAATGTTCACTAAACACCAATTTATTTGGCTGGCAGCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: THFSQGAKLCMAGKH*KCSLNTNLFGWQQE Trigger: TTCTTGCTGCCAGCCAAATAAATTGGTGTTTAGTGAACATTTTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR GCA 90 bp | CCAATTTATTTGGCTGGCAGCAAGAACCACCAAACATCCAGCTGTTaGAACTGCAAGCCTCAAACTCTGTACTTGTTGAGAAAGAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: PIYLAGSKNHQTSSC*NCKPQTLYLLRKSC Trigger: ACAGCTCTTTCTCAACAAGTACAGAGTTTGAGGCTTGCAGTTGCAACAGCTGGATGTTTGGTGGTTCTTGCTGCCAGCCAAATAAATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CCA 90 bp | CATGGCGGGGAAACACTGAAAATGTTCACTAAACACCAATTTATTTaGCTGGCAGCAAGAACCACCAAACATCCAGCTGTTGCAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: HGGETLKMFTKHQFI*LAARTTKHPAVATA Trigger: TGCAGTTGCAACAGCTGGATGTTTGGTGGTTCTTGCTGCCAGCCAAATAAATTGGTGTTTAGTGAACATTTTCAGTGTTTCCCCGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR TCA 90 bp | TTGGATCACTTTGGCAATTTTATCTCCCTTTTGAACTCGACTTTCTaGGGTCAGTGCATATTTAACATTTCACCCAAGCCTCGGCACCAG | + |
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Preference number: 1 (lower is better) Translates to: LDHFGNFISLLNSTF*GQCIFNISPKPRHQ Trigger: CTGGTGCCGAGGCTTGGGTGAAATGTTAAATATGCACTGACCTCAGAAAGTCGAGTTCAAAAGGGAGATAAAATTGCCAAAGTGATCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CCA 90 bp | CATCAGATTACCCAAATGCTGACAGTTTTGTGTGATCAACCAATGTaGGAGTCAAAGTCCTGCTGTGAAAGTCACTGCCCTGATCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: HQITQMLTVLCDQPM*ESKSCCESHCPDLL Trigger: TAAAAGATCAGGGCAGTGACTTTCACAGCAGGACTTTGACTCCCACATTGGTTGATCACACAAAACTGTCAGCATTTGGGTAATCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR TCA 90 bp | AAACATCCAGCTGTTGCAACTGCAAGCCTCAAACTCTGTACTTGTTaGGAAAGAGCTGTAACTCAGAGGCAGACTTCTTTTCAGTATTTG | + |
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Preference number: 1 (lower is better) Translates to: KHPAVATASLKLCTC*ERAVTQRQTSFQYL Trigger: CAAATACTGAAAAGAAGTCTGCCTCTGAGTTACAGCTCTTTCTCAACAAGTACAGAGTTTGAGGCTTGCAGTTGCAACAGCTGGATGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR TCA 90 bp | AACATGCACAATCCTTGGATCACTTTGGCAATTTTATCTCCCTTTTaGACTCGACTTTCTGAGGTCAGTGCATATTTAACATTTCACCCA | + |
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Preference number: 1 (lower is better) Translates to: NMHNPWITLAILSPF*TRLSEVSAYLTFHP Trigger: TGGGTGAAATGTTAAATATGCACTGACCTCAGAAAGTCGAGTTCAAAAGGGAGATAAAATTGCCAAAGTGATCCAAGGATTGTGCATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR GCA 90 bp | GACACCTGTTATCCCCTGGAGCCCTGCCCTGACTTCTCCCGGGTCATCCAACCATGCTTGGTTTTGTGTTaGGTTGTTTTGCGGAAACTA | + |
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Preference number: 2 (lower is better) Translates to: DTCYPLEPCPDFSRVIQPCLVLC*VVLRKL Trigger: TAGTTTCCGCAAAACAACGCAACACAAAACCAAGCA...TGGTTGGATGACCCGGGAGAAGTCAGGGCAGGGCTCCAGGGGATAACAGGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR TCA 90 bp | TTACACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACACTGAAAGCCACAGACCCACTTTaGTCCCGTAAAATGTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LHTFLPRRQALHGGETLKATDPL*SRKMSG Trigger: GCCTGACATTTTACGGGATCAAAGTGGGTCTGTGGC...TTTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR GCA 90 bp | TTTACACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACACTGAAGGAGTCATTTTGCATTaGCAAAGGAGAAGCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: FTHISPKAPSFAWRGNTEGVILH*QRRSRT Trigger: TGTCCTGCTTCTCCTTTGGCAATGCAAAATGACTCC...TTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTGGGTTTGCACATAGGCTGCAATGCTCAGCCACAAGCTCGATAAAGTGCACCAATTTATTTGGCTaGCAGCAAGAACCACCAAAC | + |
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Preference number: 2 (lower is better) Translates to: SSGFAHRLQCSATSSIKCTNLFG*QQEPPN Trigger: GTTTGGTGGTTCTTGCTGCCAGCCAAATAAATTGGT...GCACTTTATCGAGCTTGTGGCTGAGCATTGCAGCCTATGTGCAAACCCAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CCA 90 bp | CTTTTTGAGTGCAAACATAAAAAGCTGCATGATACTGGAGCTGTCTTGACAGAGACACCTGTTATCCCCTaGAGCCCTGCCCTGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: LFECKHKKLHDTGAVLTETPVIP*SPALTS Trigger: AGAAGTCAGGGCAGGGCTCCAGGGGATAACAGGTGT...CTCTGTCAAGACAGCTCCAGTATCATGCAGCTTTTTATGTTTGCACTCAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR TCA 90 bp | TTTACACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACACTGAAAAACTCTGTACTTGTTaGGAAAGAGCTGTAACTCAG | + |
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Preference number: 2 (lower is better) Translates to: FTHISPKAPSFAWRGNTEKLCTC*ERAVTQ Trigger: CTGAGTTACAGCTCTTTCTCAACAAGTACAGAGTTT...TTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CCA 90 bp | TCATTTTGCATTGCCAAAGGAGAAGCAGGACACCTGTTATCCCCTGGAGCCCTGTGTGTTTTGCTTGCTTaGTTTTGTGTTGCGTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SFCIAKGEAGHLLSPGALCVLLA*FCVALF Trigger: AAACAACGCAACACAAAACCAAGCAAGCAAAACACA...CAGGGCTCCAGGGGATAACAGGTGTCCTGCTTCTCCTTTGGCAATGCAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR TCA 90 bp | CAGATTACCCAAATGCTGACAGTTTTGTGTGATCAACCAATGTGGGAGTCAAAGCTCGATAAAGTGCTTTaGTTCCTTCCATCCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: QITQMLTVLCDQPMWESKLDKVL*FLPSCP Trigger: AGGACAGGATGGAAGGAATCAAAGCACTTTATCGAG...CTTTGACTCCCACATTGGTTGATCACACAAAACTGTCAGCATTTGGGTAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCTCATATGGGTTTCCCAACATGCACAATCCTTGGATCACTTTGGCAATTCCAGCCAGAAGGCACTaGCTTTTTGAGTGCAAACAT | + |
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Preference number: 2 (lower is better) Translates to: FLSYGFPNMHNPWITLAIPARRH*LFECKH Trigger: ATGTTTGCACTCAAAAAGCCAGTGCCTTCTGGCTGG...AATTGCCAAAGTGATCCAAGGATTGTGCATGTTGGGAAACCCATATGAGAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CAA 90 bp | CTATACAATGTACATTTACACACATTTCTCCCAAGGCGCCAAGCTTaGCATGGCGGGGAAACACTGAAAATGTTCACTAAACACCAATTT | + |
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Preference number: 2 (lower is better) Translates to: LYNVHLHTFLPRRQA*HGGETLKMFTKHQF Trigger: AAATTGGTGTTTAGTGAACATTTTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAAATGTACATTGTATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CAA 90 bp | AGCAACAAAACAACTATACATCAGATTACCCAAATGCTGACAGTTTaGTGTGATCAACCAATGTGGGAGTCAAAGTCCTGCTGTGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: SNKTTIHQITQMLTV*CDQPMWESKSCCES Trigger: ACTTTCACAGCAGGACTTTGACTCCCACATTGGTTGATCACACAAAACTGTCAGCATTTGGGTAATCTGATGTATAGTTGTTTTGTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR GCA 90 bp | CCACTACTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAATGGGTTTCCCAACATaGACAATCCTTGGATCACTT | + |
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Preference number: 2 (lower is better) Translates to: PLLLGRESLPPFLHRKVLMGFPT*TILGSL Trigger: AAGTGATCCAAGGATTGTGCATGTTGGGAAACCCAT...TAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAGTAGTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR TCA 90 bp | CCACTACTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAATTTTATCTCCCTTTTaGACTCGACTTTCTGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: PLLLGRESLPPFLHRKVLILSPF*TRLSEV Trigger: GACCTCAGAAAGTCGAGTTCAAAAGGGAGATAAAAT...TAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAGTAGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CAA 90 bp | AAAGTCTCCCATGGGTTCATAAATAATAGGGAAGGCTATTTTGATTaGATTTACACAGGTGACACTATTGAGACCCTAAAGCTTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: KVSHGFINNREGYFD*IYTGDTIETLKLFS Trigger: AGAGAAAAGCTTTAGGGTCTCAATAGTGTCACCTGTGTAAATCAAATCAAAATAGCCTTCCCTATTATTTATGAACCCATGGGAGACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR GCA 90 bp | CTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAAGTATGACAAGCTCGATAAAGTaGTTTGATTCCTTCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: LLGRESLPPFLHRKVLSMTSSIK*FDSFHP Trigger: AGGATGGAAGGAATCAAAGCACTTTATCGAGCTTGT...CATACTTAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CCA 90 bp | CCACTACTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTACTTCTTTTCAGTATTTaGAACAGTCAGGAGTCATTT | + |
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Preference number: 2 (lower is better) Translates to: PLLLGRESLPPFLHRKVLLLFSI*NSQESF Trigger: AAATGACTCCTGACTGTTCCAAATACTGAAAAGAAG...TAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAGTAGTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR TCA 72 bp | GAAGCAGGACACCTGTTATCCCCTGGAGCCCTGCCCTaGCTTCTCCCGGGTCATCCAACCAAGCTCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: EAGHLLSPGALP*LLPGHPTKLCP Trigger: GGGACAGAGCTTGGTTGGATGACCCGGGAGAAGTCAGGGCAGGGCTCCAGGGGATAACAGGTGTCCTGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR GCA 72 bp | AAGGAGAAGCAGGACACCTGTTATCCCCTGGAGCCCTaGCCTGACTTCTCCCGGGTCATCCAACCAAGCTCT | + |
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Preference number: 3 (lower is better) Translates to: KEKQDTCYPLEP*PDFSRVIQPSS Trigger: AGAGCTTGGTTGGATGACCCGGGAGAAGTCAGGGCAGGGCTCCAGGGGATAACAGGTGTCCTGCTTCTCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR TCA 72 bp | CAGAGCATCCCTTGGGTTAGCCTGTGGGAAATAGGATaGTGCCAGCCTTCTGGTTCCTTTCTTGCTTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: QSIPWVSLWEIG*CQPSGSFLASL Trigger: GAGGGAAGCAAGAAAGGAACCAGAAGGCTGGCATCATCCTATTTCCCACAGGCTAACCCAAGGGATGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR GCA 72 bp | TTGGCTGGCAGCAAGAACCACCAAACATCCAGCTGTTaGAACTGCAAGCCTCAAACTCTGTACTTGTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: LAGSKNHQTSSC*NCKPQTLYLLR Trigger: TCTCAACAAGTACAGAGTTTGAGGCTTGCAGTTGCAACAGCTGGATGTTTGGTGGTTCTTGCTGCCAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CCA 72 bp | CATTTCACCCAAGCCTCGGCACCAGCCAGAAGGCACTaGCTTTTTGAGTGCAAACATAAAAAGCTGCATGAT | + |
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Preference number: 3 (lower is better) Translates to: HFTQASAPARRH*LFECKHKKLHD Trigger: ATCATGCAGCTTTTTATGTTTGCACTCAAAAAGCCAGTGCCTTCTGGCTGGTGCCGAGGCTTGGGTGAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CAA 90 bp | TCCTCTGGGTTTGCACATAGGCTGCAATGCTCAGCCACAAGCTCGATAAAGTGCACTCGTGTTTGTGTTTaGCTTGCTTGGTTTTGTGTT | + |
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Preference number: 3 (lower is better) Translates to: SSGFAHRLQCSATSSIKCTRVCV*LAWFCV Trigger: AACACAAAACCAAGCAAGCAAAACACAAACACGAGT...GCACTTTATCGAGCTTGTGGCTGAGCATTGCAGCCTATGTGCAAACCCAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR GCA 72 bp | CATAGGCTGCAATGCTCAGCCACAAGCTCGATAAAGTaGTTTGATTCCTTCCATCCTGTCCTTTCTAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: HRLQCSATSSIK*FDSFHPVLSRA Trigger: TGCTCTAGAAAGGACAGGATGGAAGGAATCAAAGCACTTTATCGAGCTTGTGGCTGAGCATTGCAGCCTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CCA 72 bp | ACCCAAATGCTGACAGTTTTGTGTGATCAACCAATGTaGGAGTCAAAGTCCTGCTGTGAAAGTCACTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: TQMLTVLCDQPM*ESKSCCESHCP Trigger: AGGGCAGTGACTTTCACAGCAGGACTTTGACTCCCACATTGGTTGATCACACAAAACTGTCAGCATTTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR GCA 72 bp | AACGAAAGAAAGAAAGAAAATACTTGTGGCTCCTATTaGCACAACCGGGAGCACCTTAGCTCTAGGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: NERKKENTCGSY*HNREHLSSRSL Trigger: CAGTGACCTAGAGCTAAGGTGCTCCCGGTTGTGGCAATAGGAGCCACAAGTATTTTCTTTCTTTCTTTCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR GCA 72 bp | CCAATGTGGGAGTCAAAGTCCTGCTGTGAAAGTCACTaGCCTGATCTTTTAAGGACAACATCTACAATGCAA | + |
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Preference number: 3 (lower is better) Translates to: PMWESKSCCESH*PDLLRTTSTMQ Trigger: TTGCATTGTAGATGTTGTCCTTAAAAGATCAGGGCAGTGACTTTCACAGCAGGACTTTGACTCCCACATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR GCA 72 bp | CTTCTTTTCAGTATTTGGAACAGTCAGGAGTCATTTTaGATTGCCAAAGGAGAAGCAGGACACCTGTTATCC | + |
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Preference number: 3 (lower is better) Translates to: LLFSIWNSQESF*IAKGEAGHLLS Trigger: GGATAACAGGTGTCCTGCTTCTCCTTTGGCAATGCAAAATGACTCCTGACTGTTCCAAATACTGAAAAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CAA 90 bp | CAGATTACCCAAATGCTGACAGTTTTGTGTGATCAACCAATGTGGGAGTCAAAGTTGCTTGGTTTTGTGTaGCGTTGTTTTGCGGAAACT | + |
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Preference number: 3 (lower is better) Translates to: QITQMLTVLCDQPMWESKLLGFV*RCFAET Trigger: AGTTTCCGCAAAACAACGCAACACAAAACCAAGCAA...CTTTGACTCCCACATTGGTTGATCACACAAAACTGTCAGCATTTGGGTAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR TCA 72 bp | ATGTCCCCATGCTTCACAAATGACATCCTCCTGATATaGGAACGTTTTACTTCCATACTACTCTCACGAAAG | + |
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Preference number: 3 (lower is better) Translates to: MSPCFTNDILLI*ERFTSILLSRK Trigger: CTTTCGTGAGAGTAGTATGGAAGTAAAACGTTCTCATATCAGGAGGATGTCATTTGTGAAGCATGGGGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CAA 90 bp | CTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAAGTATGCAGTCAGGAGTCATTTaGCATTGCCAAAGGAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: LLGRESLPPFLHRKVLSMQSGVI*HCQRRS Trigger: GCTTCTCCTTTGGCAATGCAAAATGACTCCTGACTG...CATACTTAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CCA 72 bp | GAAACACTGAAAATGTTCACTAAACACCAATTTATTTaGCTGGCAGCAAGAACCACCAAACATCCAGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: ETLKMFTKHQFI*LAARTTKHPAV Trigger: AACAGCTGGATGTTTGGTGGTTCTTGCTGCCAGCCAAATAAATTGGTGTTTAGTGAACATTTTCAGTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CAA 90 bp | CCACTACTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAGGTTTGTACTCGTGTTaGTGTTTTGCTTGCTTGGTT | + |
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Preference number: 3 (lower is better) Translates to: PLLLGRESLPPFLHRKVLGLYSC*CFACLV Trigger: AACCAAGCAAGCAAAACACAAACACGAGTACAAACC...TAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAGTAGTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR TCA 72 bp | TTTGGCAATTTTATCTCCCTTTTGAACTCGACTTTCTaGGGTCAGTGCATATTTAACATTTCACCCAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: FGNFISLLNSTF*GQCIFNISPKP Trigger: AGGCTTGGGTGAAATGTTAAATATGCACTGACCTCAGAAAGTCGAGTTCAAAAGGGAGATAAAATTGCCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR GCA 72 bp | TATGAGAATCCTTTCTCTCATATGGGTTTCCCAACATaGACAATCCTTGGATCACTTTGGCAATTTTATCTC | + |
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Preference number: 3 (lower is better) Translates to: YENPFSHMGFPT*TILGSLWQFYL Trigger: GAGATAAAATTGCCAAAGTGATCCAAGGATTGTGCATGTTGGGAAACCCATATGAGAGAAAGGATTCTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CCA 72 bp | AGGAAAGTTCTAAGTATGAGAATCCTTTCTCTCATATaGGTTTCCCAACATGCACAATCCTTGGATCACTTT | + |
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Preference number: 3 (lower is better) Translates to: RKVLSMRILSLI*VSQHAQSLDHF Trigger: AAAGTGATCCAAGGATTGTGCATGTTGGGAAACCCATATGAGAGAAAGGATTCTCATACTTAGAACTTTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR-3UTR CAA 90 bp | CCACTACTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAACTTCTTTTCAGTATTaGGAACAGTCAGGAGTCATT | + |
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Preference number: 3 (lower is better) Translates to: PLLLGRESLPPFLHRKVLTSFQY*EQSGVI Trigger: AATGACTCCTGACTGTTCCAAATACTGAAAAGAAGT...TAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAGTAGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CCA 90 bp | TTTACACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACACTGAACCCTGGGGACCAGGCTaGCGCTGCTCAGCGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FTHISPKAPSFAWRGNTEPWGPG*RCSASW Trigger: CCAGCTCGCTGAGCAGCGCCAGCCTGGTCCCCAGGG...TTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR GCA 90 bp | TCATTTTGCATTGCCAAAGGAGAAGCAGGACACCTGTTATCCCCTGGAGCCCTGTCAGCGAGCTGGCGCTaGGCATCACGAAGCGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SFCIAKGEAGHLLSPGALSASWR*ASRSGL Trigger: CAGCCCGCTTCGTGATGCGCAGCGCCAGCTCGCTGA...CAGGGCTCCAGGGGATAACAGGTGTCCTGCTTCTCCTTTGGCAATGCAAAATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CCA 90 bp | TTTGCGGAAACTAGAGTCCACACACATTCACGAAGCAGCAATGCCACAGACCCAACAGCTCGACCTCCCTaGGGACCAGGCTGGCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FAETRVHTHSRSSNATDPTARPP*GPGWRC Trigger: GCAGCGCCAGCCTGGTCCCCAGGGAGGTCGAGCTGT...TGGGTCTGTGGCATTGCTGCTTCGTGAATGTGTGTGGACTCTAGTTTCCGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CCA 90 bp | TTACACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACACTGAAACGCTGCTCAGCGAGCTaGCGCTGCGCATCACGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTFLPRRQALHGGETLKRCSAS*RCASRS Trigger: GCTTCGTGATGCGCAGCGCCAGCTCGCTGAGCAGCG...TTTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CCA 90 bp | GACACCTGTTATCCCCTGGAGCCCTGCCCTGACTTCTCCCGGGTCATCCAACCATCGATACTTCCAATGTaGCTTGGGTTTCCCGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DTCYPLEPCPDFSRVIQPSILPM*LGFPVF Trigger: AAAGACGGGAAACCCAAGCCACATTGGAAGTATCGA...TGGTTGGATGACCCGGGAGAAGTCAGGGCAGGGCTCCAGGGGATAACAGGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR TCA 90 bp | TCCTCTGGGTTTGCACATAGGCTGCAATGCTCAGCCACAAGCTCGATAAAGTGCTCGAAGAGCATGTGGTaGAGGTGTGAAGGAACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSGFAHRLQCSATSSIKCSKSMW*RCEGTY Trigger: GTACGTTCCTTCACACCTTCACCACATGCTCTTCGA...GCACTTTATCGAGCTTGTGGCTGAGCATTGCAGCCTATGTGCAAACCCAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| 3UTR CAA 72 bp | CCCAAGCCTCGGCACCAGCCAGAAGGCACTGGCTTTTaGAGTGCAAACATAAAAAGCTGCATGATACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PKPRHQPEGTGF*SANIKSCMILE Trigger: CTCCAGTATCATGCAGCTTTTTATGTTTGCACTCAAAAAGCCAGTGCCTTCTGGCTGGTGCCGAGGCTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR GCA 90 bp | TCCTCTGGGTTTGCACATAGGCTGCAATGCTCAGCCACAAGCTCGATAAAGTGCGGCATCTTGGACTACTaGTACCACATCACAGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGFAHRLQCSATSSIKCGILDY*YHITVW Trigger: CCAAACTGTGATGTGGTAGCAGTAGTCCAAGATGCC...GCACTTTATCGAGCTTGTGGCTGAGCATTGCAGCCTATGTGCAAACCCAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CCA 90 bp | TCAGCCTCCCAAGCCTCACGCACATCACTAGTTCATGATGTCCCCATGCTTCACAAATCCATCAGGCTCTaGATATACCAGCTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SASQASRTSLVHDVPMLHKSIRL*IYQLFT Trigger: GGTGAAGAGCTGGTATATCCAGAGCCTGATGGATTT...GTGAAGCATGGGGACATCATGAACTAGTGATGTGCGTGAGGCTTGGGAGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACACTGAAAATGTTCACTAAAGTCCATCACAGGTGTTaGAGCAGTGGAGTACGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPRRQALHGGETLKMFTKVHHRC*SSGVRV Trigger: TACACGTACTCCACTGCTCCAACACCTGTGATGGAC...TTTAGTGAACATTTTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| 3UTR CAA 72 bp | TGGAGCTGTCTTGACAGAGATACTTTTCCTCTGGGTTaGCACATAGGCTGCAATGCTCAGCCACAAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WSCLDRDTFPLG*HIGCNAQPQAR Trigger: TCGAGCTTGTGGCTGAGCATTGCAGCCTATGTGCAAACCCAGAGGAAAAGTATCTCTGTCAAGACAGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CCA 90 bp | GTACATTTACACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACATCTGGGCTCTTCTCATaGAACTCCACCAAATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: VHLHTFLPRRQALHGGETSGLFS*NSTKSI Trigger: GATGGATTTGGTGGAGTTCCATGAGAAGAGCCCAGA...TGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAAATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTCCCAAGCCTCACGCACATCACTAGTTCATGATGTCCCCATGCTTCACGTGGATTGGTTGGCCTaGAAATTTTCCATTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SASQASRTSLVHDVPMLHVDWLA*KFSIDL Trigger: CAAGTCAATGGAAAATTTCCAGGCCAACCAATCCAC...GTGAAGCATGGGGACATCATGAACTAGTGATGTGCGTGAGGCTTGGGAGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CCA 90 bp | TCCTCTGGGTTTGCACATAGGCTGCAATGCTCAGCCACAAGCTCGATAAAGTGCACAATGTGGATTGGTTaGCCTGGAAATTTTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGFAHRLQCSATSSIKCTMWIG*PGNFPL Trigger: CAATGGAAAATTTCCAGGCCAACCAATCCACATTGT...GCACTTTATCGAGCTTGTGGCTGAGCATTGCAGCCTATGTGCAAACCCAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CCA 90 bp | TTTGCGGAAACTAGAGTCCACACACATTCACGAAGCAGCAATGCCACAGACCCAGTACACAATGTGGATTaGTTGGCCTGGAAATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FAETRVHTHSRSSNATDPVHNVD*LAWKFS Trigger: GGAAAATTTCCAGGCCAACCAATCCACATTGTGTAC...TGGGTCTGTGGCATTGCTGCTTCGTGAATGTGTGTGGACTCTAGTTTCCGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| 3UTR CAA 72 bp | TCCAGCTGTTGCAACTGCAAGCCTCAAACTCTGTACTaGTTGAGAAAGAGCTGTAACTCAGAGGCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSCCNCKPQTLY*LRKSCNSEADF Trigger: GAAGTCTGCCTCTGAGTTACAGCTCTTTCTCAACAAGTACAGAGTTTGAGGCTTGCAGTTGCAACAGCTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| 3UTR CAA 72 bp | CATCCAACCAAGCTCTGTCCCTCATCAGGTCAAGGTTaGTACTCGTGTTTGTGTTTTGCTTGCTTGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPTKLCPSSGQG*YSCLCFACLVL Trigger: CAAAACCAAGCAAGCAAAACACAAACACGAGTACAAACCTTGACCTGATGAGGGACAGAGCTTGGTTGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| 3UTR CAA 72 bp | CTCTGTCCCTCATCAGGTCAAGGTTTGTACTCGTGTTaGTGTTTTGCTTGCTTGGTTTTGTGTTGCGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCPSSGQGLYSC*CFACLVLCCVV Trigger: AACAACGCAACACAAAACCAAGCAAGCAAAACACAAACACGAGTACAAACCTTGACCTGATGAGGGACAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| 3UTR CAA 72 bp | AGCTGTTGCAACTGCAAGCCTCAAACTCTGTACTTGTaGAGAAAGAGCTGTAACTCAGAGGCAGACTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCCNCKPQTLYL*RKSCNSEADFF Trigger: AAAGAAGTCTGCCTCTGAGTTACAGCTCTTTCTCAACAAGTACAGAGTTTGAGGCTTGCAGTTGCAACAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| 3UTR CAA 72 bp | GTACATTTACACACATTTCTCCCAAGGCGCCAAGCTTaGCATGGCGGGGAAACACTGAAAATGTTCACTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VHLHTFLPRRQA*HGGETLKMFTK Trigger: TTTAGTGAACATTTTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAAATGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CAA 72 bp | TTGTGTTTTGCTTGCTTGGTTTTGTGTTGCGTTGTTTaGCGGAAACTAGAGTCCACACACATTCACGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCFACLVLCCVV*RKLESTHIHEA Trigger: TGCTTCGTGAATGTGTGTGGACTCTAGTTTCCGCAAAACAACGCAACACAAAACCAAGCAAGCAAAACACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CAA 72 bp | GGTTTGTACTCGTGTTTGTGTTTTGCTTGCTTGGTTTaGTGTTGCGTTGTTTTGCGGAAACTAGAGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GLYSCLCFACLV*CCVVLRKLEST Trigger: TGTGGACTCTAGTTTCCGCAAAACAACGCAACACAAAACCAAGCAAGCAAAACACAAACACGAGTACAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CAA 72 bp | ACTTCTTTTCAGTATTTGGAACAGTCAGGAGTCATTTaGCATTGCCAAAGGAGAAGCAGGACACCTGTTATC | + |
|
Preference number: 4 (lower is better) Translates to: TSFQYLEQSGVI*HCQRRSRTPVI Trigger: GATAACAGGTGTCCTGCTTCTCCTTTGGCAATGCAAAATGACTCCTGACTGTTCCAAATACTGAAAAGAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| 3UTR CAA 72 bp | ACAACTATACATCAGATTACCCAAATGCTGACAGTTTaGTGTGATCAACCAATGTGGGAGTCAAAGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TTIHQITQMLTV*CDQPMWESKSC Trigger: GCAGGACTTTGACTCCCACATTGGTTGATCACACAAAACTGTCAGCATTTGGGTAATCTGATGTATAGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR TCA 90 bp | TTTCTCTCATATGGGTTTCCCAACATGCACAATCCTTGGATCACTTTGGCAATTGTAGGGACCACATTATaGTGTCTGTTTCGAACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSYGFPNMHNPWITLAIVGTTL*CLFRTL Trigger: CAAAGTTCGAAACAGACATCATAATGTGGTCCCTAC...AATTGCCAAAGTGATCCAAGGATTGTGCATGTTGGGAAACCCATATGAGAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR GCA 90 bp | CTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAAGTATGGGTTCTTCGGTTCCCTaGTTGGGATACACCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGRESLPPFLHRKVLSMGSSVP*LGYTSH Trigger: ATGACTGGTGTATCCCAAGCAGGGAACCGAAGAACC...CATACTTAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGAGTGCAAACATAAAAAGCTGCATGATACTGGAGCTGTCTTGACAGAGTACCACATCACAGTTTaGGTCGATACTTCCAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFECKHKKLHDTGAVLTEYHITV*VDTSNV Trigger: CACATTGGAAGTATCGACCCAAACTGTGATGTGGTA...CTCTGTCAAGACAGCTCCAGTATCATGCAGCTTTTTATGTTTGCACTCAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR GCA 90 bp | CTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAAGTATGGTCGCAGAGCATCTTTaGACACTCAAAGGCATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGRESLPPFLHRKVLSMVAEHL*TLKGIL Trigger: CAAGATGCCTTTGAGTGTGCAAAGATGCTCTGCGAC...CATACTTAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| 3UTR CAA 72 bp | CTTTCTCTCATATGGGTTTCCCAACATGCACAATCCTaGGATCACTTTGGCAATTTTATCTCCCTTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLIWVSQHAQS*DHFGNFISLLN Trigger: GTTCAAAAGGGAGATAAAATTGCCAAAGTGATCCAAGGATTGTGCATGTTGGGAAACCCATATGAGAGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR TCA 90 bp | CTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAAGTATGTGGGTTTCCCGTCTTTaGGTCACTGAATATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLGRESLPPFLHRKVLSMWVSRL*VTEYED Trigger: ATCCTCATATTCAGTGACTCAAAGACGGGAAACCCA...CATACTTAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR TCA 90 bp | CTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAAGTATGGTCTGTCCCATAACCTaGCATAGAGTAGAGATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGRESLPPFLHRKVLSMVCPIT*HRVEIQ Trigger: CTGAATCTCTACTCTATGTCAGGTTATGGGACAGAC...CATACTTAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR TCA 90 bp | CTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAAGTATGAATATGAGGATGTGCTaGTTCATGAGCATCCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLGRESLPPFLHRKVLSMNMRMC*FMSIRV Trigger: TACTCGGATGCTCATGAATCAGCACATCCTCATATT...CATACTTAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR TCA 90 bp | CCACTACTTCTAGGTAGAGAAAGTTTACCACCATTTCTTCATAGGAAAGTTCTAATAATGTTTGAAGGCTaGCTTGTTAAAGACTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLLLGRESLPPFLHRKVLIMFEG*LVKDWE Trigger: CTCCCAGTCTTTAACAAGTCAGCCTTCAAACATTAT...TAGAACTTTCCTATGAAGAAATGGTGGTAAACTTTCTCTACCTAGAAGTAGTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS CCA 90 bp | TGGACAGCGGGGACGGGCTGTAGCGGGAGAACAGCTCGACCTCCCTaGGGACCAGGCTGGCGCTGCTCAGCGAGCTGGCGCTGCGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: WTAGTGCSGRTARPP*GPGWRCSASWRCAS Trigger: TGATGCGCAGCGCCAGCTCGCTGAGCAGCGCCAGCCTGGTCCCCAGGGAGGTCGAGCTGTTCTCCCGCTACAGCCCGTCCCCGCTGTCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS GCA 90 bp | TGTAGCGGGAGAACAGCTCGACCTCCCTGGGGACCAGGCTGGCGCTaGTCAGCGAGCTGGCGCTGCGCATCACGAAGCGGGCTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSGRTARPPWGPGWR*SASWRCASRSGLPS Trigger: TGAAGGCAGCCCGCTTCGTGATGCGCAGCGCCAGCTCGCTGAGCAGCGCCAGCCTGGTCCCCAGGGAGGTCGAGCTGTTCTCCCGCTACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS CCA 90 bp | TGTTCACTAAGCGGTCAGGCAGGATGTCAATCTCCTTCAGGATATTaGCCAGGCGGACGGGCAGCTCTTGCCGCAGAAAAGCAAAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: CSLSGQAGCQSPSGY*PGGRAALAAEKQRT Trigger: CGTCCTTTGCTTTTCTGCGGCAAGAGCTGCCCGTCCGCCTGGCCAATATCCTGAAGGAGATTGACATCCTGCCTGACCGCTTAGTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CAA 90 bp | GACACCTGTTATCCCCTGGAGCCCTGCCCTGACTTCTCCCGGGTCATCCAACCACACAATGTGGATTGGTaGGCCTGGAAATTTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: DTCYPLEPCPDFSRVIQPHNVDW*AWKFSI Trigger: AATGGAAAATTTCCAGGCCAACCAATCCACATTGTG...TGGTTGGATGACCCGGGAGAAGTCAGGGCAGGGCTCCAGGGGATAACAGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS GCA 90 bp | TCCACCAAATCCATCAGGCTCTGGATATACCAGCTCTTCACCAGCTaGACCGAAGGAGTGTTCACTAAGCGGTCAGGCAGGATGTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: STKSIRLWIYQLFTS*TEGVFTKRSGRMSI Trigger: GATTGACATCCTGCCTGACCGCTTAGTGAACACTCCTTCGGTGCAGCTGGTGAAGAGCTGGTATATCCAGAGCCTGATGGATTTGGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS CCA 90 bp | CTTGATTGTAAGGTCTTCTTTTCCCAAGACGACAGTGGCCTCTACTaGGGTCAAGGAAGGACGGTTTTCTTGATGCTCGACCGTGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LDCKVFFSQDDSGLY*GQGRTVFLMLDRGP Trigger: AGGGCCACGGTCGAGCATCAAGAAAACCGTCCTTCCTTGACCCCAGTAGAGGCCACTGTCGTCTTGGGAAAAGAAGACCTTACAATCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS TCA 90 bp | ACCGTGGCCCTCATGGCATTCTTGAAGAGTTCGAAGAGCATGTGGTaGAGGTGTGAAGGAACGTACACAATGTGGATTGGTTGGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TVALMAFLKSSKSMW*RCEGTYTMWIGWPG Trigger: TCCAGGCCAACCAATCCACATTGTGTACGTTCCTTCACACCTTCACCACATGCTCTTCGAACTCTTCAAGAATGCCATGAGGGCCACGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CAA 90 bp | TTTGCGGAAACTAGAGTCCACACACATTCACGAAGCAGCAATGCCACAGACCCAATACTCCAGGATGCCTaGAGCCATTGTAGGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: FAETRVHTHSRSSNATDPILQDA*SHCRDH Trigger: GTGGTCCCTACAATGGCTCAAGGCATCCTGGAGTAT...TGGGTCTGTGGCATTGCTGCTTCGTGAATGTGTGTGGACTCTAGTTTCCGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTCCCAAGCCTCACGCACATCACTAGTTCATGATGTCCCCATGCTTCACTACTTCCAATGTGGCTaGGGTTTCCCGTCTTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SASQASRTSLVHDVPMLHYFQCG*GFPSLS Trigger: ACTCAAAGACGGGAAACCCAAGCCACATTGGAAGTA...GTGAAGCATGGGGACATCATGAACTAGTGATGTGCGTGAGGCTTGGGAGGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CAA 90 bp | TTTGCGGAAACTAGAGTCCACACACATTCACGAAGCAGCAATGCCACAGACCCATGTCCATCACAGGTGTaGGAGCAGTGGAGTACGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FAETRVHTHSRSSNATDPCPSQV*EQWSTC Trigger: ACACGTACTCCACTGCTCCAACACCTGTGATGGACA...TGGGTCTGTGGCATTGCTGCTTCGTGAATGTGTGTGGACTCTAGTTTCCGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTCCCAAGCCTCACGCACATCACTAGTTCATGATGTCCCCATGCTTCACCTACCACATCACAGTTaGGGTCGATACTTCCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: SASQASRTSLVHDVPMLHLPHHS*GRYFQC Trigger: ACATTGGAAGTATCGACCCAAACTGTGATGTGGTAG...GTGAAGCATGGGGACATCATGAACTAGTGATGTGCGTGAGGCTTGGGAGGCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS CCA 90 bp | TCTACAAACTCTGACAGGGCTTTCTGGTCTTCTGGGCTCTTCTCATaGAACTCCACCAAATCCATCAGGCTCTGGATATACCAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STNSDRAFWSSGLFS*NSTKSIRLWIYQLF Trigger: GAAGAGCTGGTATATCCAGAGCCTGATGGATTTGGTGGAGTTCCATGAGAAGAGCCCAGAAGACCAGAAAGCCCTGTCAGAGTTTGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CAA 90 bp | GTACATTTACACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACAACACTCAAAGGCATCTaGGACTACTGCTACCACATC | + |
|
Preference number: 5 (lower is better) Translates to: VHLHTFLPRRQALHGGETTLKGI*DYCYHI Trigger: GATGTGGTAGCAGTAGTCCAAGATGCCTTTGAGTGT...TGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAAATGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CAA 90 bp | TCATTTTGCATTGCCAAAGGAGAAGCAGGACACCTGTTATCCCCTGGAGCCCTGCGTACACAATGTGGATaGGTTGGCCTGGAAATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFCIAKGEAGHLLSPGALRTQCG*VGLEIF Trigger: GAAAATTTCCAGGCCAACCAATCCACATTGTGTACG...CAGGGCTCCAGGGGATAACAGGTGTCCTGCTTCTCCTTTGGCAATGCAAAATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CAA 90 bp | TCCTCTGGGTTTGCACATAGGCTGCAATGCTCAGCCACAAGCTCGATAAAGTGCGAGATTCAGATCTCCTaGAAAATACTTGGCGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGFAHRLQCSATSSIKCEIQIS*KILGVE Trigger: CTCTACGCCAAGTATTTTCAAGGAGATCTGAATCTC...GCACTTTATCGAGCTTGTGGCTGAGCATTGCAGCCTATGTGCAAACCCAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CAA 90 bp | CTTTTTGAGTGCAAACATAAAAAGCTGCATGATACTGGAGCTGTCTTGACAGAGGGGGCATTCCGGGAATaGTCCATCACAGGTGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFECKHKKLHDTGAVLTEGAFRE*SITGVG Trigger: TCCAACACCTGTGATGGACAATTCCCGGAATGCCCC...CTCTGTCAAGACAGCTCCAGTATCATGCAGCTTTTTATGTTTGCACTCAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
||
| CDS-3UTR CAA 90 bp | TTACACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACACTGAAACCTCGGTCAGAAATCTaGATTGTAAGGTCTTCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LHTFLPRRQALHGGETLKPRSEI*IVRSSF Trigger: AAAAGAAGACCTTACAATCAAGATTTCTGACCGAGG...TTTCAGTGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CAA 90 bp | GTACATTTACACACATTTCTCCCAAGGCGCCAAGCTTTGCATGGCGGGGAAACACCTGGAAATTTTCCATaGACTTGTGTGAGGTTTAAT | + |
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Preference number: 5 (lower is better) Translates to: VHLHTFLPRRQALHGGETPGNFP*TCVRFN Trigger: ATTAAACCTCACACAAGTCAATGGAAAATTTCCAGG...TGTTTCCCCGCCATGCAAAGCTTGGCGCCTTGGGAGAAATGTGTGTAAATGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CAA 90 bp | AGAGCTGTAACTCAGAGGCAGACTTCTTTTCAGTATTTGGAACAGTCAGGAGTCAAAATACTGAAGATTTaGATTGGTAACGGGGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: RAVTQRQTSFQYLEQSGVKILKI*IGNGVH Trigger: GTGGACCCCGTTACCAATCAAAATCTTCAGTATTTT...GACTCCTGACTGTTCCAAATACTGAAAAGAAGTCTGCCTCTGAGTTACAGCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS-3UTR CAA 90 bp | CTTTTTGAGTGCAAACATAAAAAGCTGCATGATACTGGAGCTGTCTTGACAGAGTGTTTGAAGGCTGACTaGTTAAAGACTGGGAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LFECKHKKLHDTGAVLTECLKAD*LKTGSF Trigger: AAAGCTCCCAGTCTTTAACAAGTCAGCCTTCAAACA...CTCTGTCAAGACAGCTCCAGTATCATGCAGCTTTTTATGTTTGCACTCAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS GCA 72 bp | AGAACAGCTCGACCTCCCTGGGGACCAGGCTGGCGCTaGTCAGCGAGCTGGCGCTGCGCATCACGAAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: RTARPPWGPGWR*SASWRCASRSG Trigger: CCCGCTTCGTGATGCGCAGCGCCAGCTCGCTGAGCAGCGCCAGCCTGGTCCCCAGGGAGGTCGAGCTGTTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS CCA 72 bp | AGCGGTCAGGCAGGATGTCAATCTCCTTCAGGATATTaGCCAGGCGGACGGGCAGCTCTTGCCGCAGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: SGQAGCQSPSGY*PGGRAALAAEK Trigger: CTTTTCTGCGGCAAGAGCTGCCCGTCCGCCTGGCCAATATCCTGAAGGAGATTGACATCCTGCCTGACCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS CAA 72 bp | AAGCGGTCAGGCAGGATGTCAATCTCCTTCAGGATATaGGCCAGGCGGACGGGCAGCTCTTGCCGCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: KRSGRMSISFRI*ARRTGSSCRRK Trigger: TTTTCTGCGGCAAGAGCTGCCCGTCCGCCTGGCCAATATCCTGAAGGAGATTGACATCCTGCCTGACCGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS CAA 90 bp | GTGTTCACTAAGCGGTCAGGCAGGATGTCAATCTCCTTCAGGATATaGGCCAGGCGGACGGGCAGCTCTTGCCGCAGAAAAGCAAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: VFTKRSGRMSISFRI*ARRTGSSCRRKAKD Trigger: GTCCTTTGCTTTTCTGCGGCAAGAGCTGCCCGTCCGCCTGGCCAATATCCTGAAGGAGATTGACATCCTGCCTGACCGCTTAGTGAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS CCA 72 bp | AAGGTCTTCTTTTCCCAAGACGACAGTGGCCTCTACTaGGGTCAAGGAAGGACGGTTTTCTTGATGCTCGAC | + |
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Preference number: 6 (lower is better) Translates to: KVFFSQDDSGLY*GQGRTVFLMLD Trigger: GTCGAGCATCAAGAAAACCGTCCTTCCTTGACCCCAGTAGAGGCCACTGTCGTCTTGGGAAAAGAAGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS CAA 72 bp | CAAAGGCATCTTGGACTACTGCTACCACATCACAGTTaGGGTCGATACTTCCAATGTGGCTTGGGTTTCCCG | + |
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Preference number: 6 (lower is better) Translates to: QRHLGLLLPHHS*GRYFQCGLGFP Trigger: CGGGAAACCCAAGCCACATTGGAAGTATCGACCCAAACTGTGATGTGGTAGCAGTAGTCCAAGATGCCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS CCA 72 bp | AAAGGCATCTTGGACTACTGCTACCACATCACAGTTTaGGTCGATACTTCCAATGTGGCTTGGGTTTCCCGT | + |
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Preference number: 6 (lower is better) Translates to: KGILDYCYHITV*VDTSNVAWVSR Trigger: ACGGGAAACCCAAGCCACATTGGAAGTATCGACCCAAACTGTGATGTGGTAGCAGTAGTCCAAGATGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS CAA 90 bp | TTGCACACTCAAAGGCATCTTGGACTACTGCTACCACATCACAGTTaGGGTCGATACTTCCAATGTGGCTTGGGTTTCCCGTCTTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LHTQRHLGLLLPHHS*GRYFQCGLGFPSLS Trigger: ACTCAAAGACGGGAAACCCAAGCCACATTGGAAGTATCGACCCAAACTGTGATGTGGTAGCAGTAGTCCAAGATGCCTTTGAGTGTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS TCA 72 bp | ATTCTTGAAGAGTTCGAAGAGCATGTGGTGAAGGTGTaGAGGAACGTACACAATGTGGATTGGTTGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ILEEFEEHVVKV*RNVHNVDWLAW Trigger: CCAGGCCAACCAATCCACATTGTGTACGTTCCTTCACACCTTCACCACATGCTCTTCGAACTCTTCAAGAAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS TCA 72 bp | CTCATGGCATTCTTGAAGAGTTCGAAGAGCATGTGGTaGAGGTGTGAAGGAACGTACACAATGTGGATTGGT | + |
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Preference number: 6 (lower is better) Translates to: LMAFLKSSKSMW*RCEGTYTMWIG Trigger: ACCAATCCACATTGTGTACGTTCCTTCACACCTTCACCACATGCTCTTCGAACTCTTCAAGAATGCCATGAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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| CDS TCA 72 bp | ATCAGCTTCGGAGCTCATCTGATAATGTTTGAAGGCTaGCTTGTTAAAGACTGGGAGCTTTTCTACAGACTC | + |
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Preference number: 6 (lower is better) Translates to: ISFGAHLIMFEG*LVKDWELFYRL Trigger: GAGTCTGTAGAAAAGCTCCCAGTCTTTAACAAGTCAGCCTTCAAACATTATCAGATGAGCTCCGAAGCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019721.7 |
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