Pregenerated sensors for PDK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038967Ensembl transcript IDs: ENSMUST00000038431.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGACCACCACAGTTGGGCCACTGAGATTTCTACAAAGACAGATCTaGCCATCAGGGAGACCCAGTTTCACCCCTTGTACCCTAGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GTTTVGPLRFLQRQI*PSGRPSFTPCTLGD Trigger: ATCCCCTAGGGTACAAGGGGTGAAACTGGGTCTCCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGTGGTGGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR TCA 90 bp | AGAGTCAAGGGTGGACCCTATCTTCCCCCAGTCCCTCTCCAGACTTaGGGGCACTCCATCCTTCTTAACATTGACAAAGAACCCAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: RVKGGPYLPPVPLQT*GHSILLNIDKEPSP Trigger: TGGGCTGGGTTCTTTGTCAATGTTAAGAAGGATGGAGTGCCCTCAAGTCTGGAGAGGGACTGGGGGAAGATAGGGTCCACCCTTGACTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR GCA 90 bp | GGTGGGCCCCGGGTGAGAATCGCTACCTACTCTCAAGTTCCCAATTaGAACTTCATACCATCCAGAGTAGAGATAGAGGCTGCAGGATCA | + |
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Preference number: 1 (lower is better) Translates to: GGPRVRIATYSQVPN*NFIPSRVEIEAAGS Trigger: TGATCCTGCAGCCTCTATCTCTACTCTGGATGGTATGAAGTTGCAATTGGGAACTTGAGAGTAGGTAGCGATTCTCACCCGGGGCCCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR GCA 90 bp | AGTTCCCAATTGCAACTTCATACCATCCAGAGTAGAGATAGAGGCTaGAGGATCAGAGTCAAGGGTGGACCCTATCTTCCCCCAGTCCCT | + |
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Preference number: 1 (lower is better) Translates to: SSQLQLHTIQSRDRG*RIRVKGGPYLPPVP Trigger: AGGGACTGGGGGAAGATAGGGTCCACCCTTGACTCTGATCCTGCAGCCTCTATCTCTACTCTGGATGGTATGAAGTTGCAATTGGGAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR CCA 90 bp | GGGTTTCTCCACAGAGACATATTGGCACTTAGGGACCACCACAGTTaGGCCACTGAGATTTCTACAAAGACAGATCTGGCCATCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: GFLHRDILALRDHHS*ATEISTKTDLAIRE Trigger: CTCCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGTGGTGGTCCCTAAGTGCCAATATGTCTCTGTGGAGAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGCCACTGGGAGGGCACACGGCTTTAACCCCTGTGTGTGGAGGGGAAGGGGGCATAGGGGTGGGGTaGGGTCTGAAGCTCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: SQPLGGHTALTPVCGGEGGIGVG*GLKLRQ Trigger: CTGCCTGAGCTTCAGACCCCACCCCACCCCTATGCC...CCCTTCCCCTCCACACACAGGGGTTAAAGCCGTGTGCCCTCCCAGTGGCTGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR-3UTR TCA 90 bp | CACCTTGGGGGCAGCTTACTCCTAGGCCTGCCCTCTCGGTGGGCCCCGGGTGAGCCACAGTTGGGCCACTaGGATTTCTACAAAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: HLGGSLLLGLPSRWAPGEPQLGH*DFYKDR Trigger: TCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGTGG...CTCACCCGGGGCCCACCGAGAGGGCAGGCCTAGGAGTAAGCTGCCCCCAAGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGGCAGCTTACTCCTAGGCCTGCCCTCTCGGTGGGCCCCGGGTGAGAATCGCAGTAGAGATAGAGGCTaGAGGATCAGAGTCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GGSLLLGLPSRWAPGENRSRDRG*RIRVKG Trigger: ACCCTTGACTCTGATCCTGCAGCCTCTATCTCTACT...GCGATTCTCACCCGGGGCCCACCGAGAGGGCAGGCCTAGGAGTAAGCTGCCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGTACAGTGTGTGGGCATAAGGCAAGCGGAGCAGCCACTTGGAAGGCCAGGGGAAGGTCCCTGTGGTaGCTGGATTCAGAGGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: ACTVCGHKASGAATWKARGRSLW*LDSEVA Trigger: TGCCACCTCTGAATCCAGCCACCACAGGGACCTTCC...CCTGGCCTTCCAAGTGGCTGCTCCGCTTGCCTTATGCCCACACACTGTACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTGTTTACTGTGGATGTCACTGTCACCATCCCAGCCACTGGGAGGGCACACTGGGAGAAGTGTCTCTaGGCCACCCCATCAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HLFTVDVTVTIPATGRAHWEKCL*ATPSGR Trigger: TCTCCCTGATGGGGTGGCCCAGAGACACTTCTCCCA...GTGTGCCCTCCCAGTGGCTGGGATGGTGACAGTGACATCCACAGTAAACAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGGAGAGCCATCCCCAACCCTCAAGCATCACTATGGAAACCGGGTTCCAGGAGGGACCACCACAGTTaGGCCACTGAGATTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: SGRAIPNPQASLWKPGSRRDHHS*ATEIST Trigger: TGTAGAAATCTCAGTGGCCCAACTGTGGTGGTCCCT...CCTGGAACCCGGTTTCCATAGTGATGCTTGAGGGTTGGGGATGGCTCTCCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR CAA 90 bp | ACCGGGTTCCAGGGAAACCCCCTAGGGTTTCTCCACAGAGACATATaGGCACTTAGGGACCACCACAGTTGGGCCACTGAGATTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: TGFQGNPLGFLHRDI*ALRDHHSWATEIST Trigger: TGTAGAAATCTCAGTGGCCCAACTGTGGTGGTCCCTAAGTGCCAATATGTCTCTGTGGAGAAACCCTAGGGGGTTTCCCTGGAACCCGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR CAA 90 bp | CCCCAGTCCCTCTCCAGACTTGAGGGCACTCCATCCTTCTTAACATaGACAAAGAACCCAGCCCAAATGTGCCTGTACAGTGTGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: PQSLSRLEGTPSFLT*TKNPAQMCLYSVWA Trigger: TGCCCACACACTGTACAGGCACATTTGGGCTGGGTTCTTTGTCAATGTTAAGAAGGATGGAGTGCCCTCAAGTCTGGAGAGGGACTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR CAA 90 bp | CGGTGGGCCCCGGGTGAGAATCGCTACCTACTCTCAAGTTCCCAATaGCAACTTCATACCATCCAGAGTAGAGATAGAGGCTGCAGGATC | + |
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Preference number: 2 (lower is better) Translates to: RWAPGENRYLLSSSQ*QLHTIQSRDRGCRI Trigger: GATCCTGCAGCCTCTATCTCTACTCTGGATGGTATGAAGTTGCAATTGGGAACTTGAGAGTAGGTAGCGATTCTCACCCGGGGCCCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR CCA 72 bp | CTTGGGGGCAGCTTACTCCTAGGCCTGCCCTCTCGGTaGGCCCCGGGTGAGAATCGCTACCTACTCTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: LGGSLLLGLPSR*APGENRYLLSS Trigger: ACTTGAGAGTAGGTAGCGATTCTCACCCGGGGCCCACCGAGAGGGCAGGCCTAGGAGTAAGCTGCCCCCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR-3UTR CAA 90 bp | CACCTTGGGGGCAGCTTACTCCTAGGCCTGCCCTCTCGGTGGGCCCCGGGTGAGCCATCCTTCTTAACATaGACAAAGAACCCAGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: HLGGSLLLGLPSRWAPGEPSFLT*TKNPAQ Trigger: TTGGGCTGGGTTCTTTGTCAATGTTAAGAAGGATGG...CTCACCCGGGGCCCACCGAGAGGGCAGGCCTAGGAGTAAGCTGCCCCCAAGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR CCA 72 bp | GTCACTTGTGCACACATAGTGGGCATAGGGGTGGGGTaGGGTCTGAAGCTCAGGCAGCATAGGGTGGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: VTCAHIVGIGVG*GLKLRQHRVGV Trigger: TACACCCACCCTATGCTGCCTGAGCTTCAGACCCCACCCCACCCCTATGCCCACTATGTGTGCACAAGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR CCA 72 bp | ACAGTTGGGCCACTGAGATTTCTACAAAGACAGATCTaGCCATCAGGGAGACCCAGTTTCACCCCTTGTACC | + |
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Preference number: 3 (lower is better) Translates to: TVGPLRFLQRQI*PSGRPSFTPCT Trigger: GGTACAAGGGGTGAAACTGGGTCTCCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR CCA 72 bp | CACAGAGACATATTGGCACTTAGGGACCACCACAGTTaGGCCACTGAGATTTCTACAAAGACAGATCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: HRDILALRDHHS*ATEISTKTDLA Trigger: GGCCAGATCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGTGGTGGTCCCTAAGTGCCAATATGTCTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| 3UTR-3UTR CAA 90 bp | CCATCCTTCTTAACATTGACAAAGAACCCAGCCCAAATGTGCCTGTACAGTGTGCAGACAGTTCTGATCTaGGGAGAAGTGTCTCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: PSFLTLTKNPAQMCLYSVQTVLI*GEVSLG Trigger: GCCCAGAGACACTTCTCCCAAGATCAGAACTGTCTG...CACACTGTACAGGCACATTTGGGCTGGGTTCTTTGTCAATGTTAAGAAGGATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | CACCTTGGGGGCAGCTTACTCCTAGGCCTGCCCTCTCGGTGGGCCCCGGGTGAGTCTTGGGCTCTGTGCTaGGCACACACCAGTCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: HLGGSLLLGLPSRWAPGESWALC*AHTSRR Trigger: CCGGCGACTGGTGTGTGCCCAGCACAGAGCCCAAGA...CTCACCCGGGGCCCACCGAGAGGGCAGGCCTAGGAGTAAGCTGCCCCCAAGGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | CACCTTGGGGGCAGCTTACTCCTAGGCCTGCCCTCTCGGTGGGCCCCGGGTGAGCAGACACGCTGCAGTTaGGATCGATGCTGCCAATGT | + |
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Preference number: 4 (lower is better) Translates to: HLGGSLLLGLPSRWAPGEQTRCS*DRCCQC Trigger: ACATTGGCAGCATCGATCCCAACTGCAGCGTGTCTG...CTCACCCGGGGCCCACCGAGAGGGCAGGCCTAGGAGTAAGCTGCCCCCAAGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | GGGGGCAGCTTACTCCTAGGCCTGCCCTCTCGGTGGGCCCCGGGTGAGAATCGCCATAGACCATGTGAATaGGCTGGTTGGCGTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GGSLLLGLPSRWAPGENRHRPCE*AGWRWW Trigger: CCACCAACGCCAACCAGCCCATTCACATGGTCTATG...GCGATTCTCACCCGGGGCCCACCGAGAGGGCAGGCCTAGGAGTAAGCTGCCCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | TGGGGTCTGAAGCTCAGGCAGCATAGGGTGGGTGTAGACTGGGCAGGGGAGGTGGTGAGGCTGGACTCGTaGCTTTCCACAGTGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: WGLKLRQHRVGVDWAGEVVRLDS*LSTVAR Trigger: GCGGGCCACTGTGGAAAGCCACGAGTCCAGCCTCAC...CACCTCCCCTGCCCAGTCTACACCCACCCTATGCTGCCTGAGCTTCAGACCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGGGGAGGTGTGCACGTGAGGACATGCTGGGTGGGCAAGGCTTTAGGAAGCTCCCTGTGCCATGGTaGGCACCACGTCATTGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GQGRCAREDMLGGQGFRKLPVPW*APRHCA Trigger: GGCACAATGACGTGGTGCCCACCATGGCACAGGGAG...CTTCCTAAAGCCTTGCCCACCCAGCATGTCCTCACGTGCACACCTCCCCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGGGGAGGTGTGCACGTGAGGACATGCTGGGTGGGCAAGGCTTTAGGAAGTGTTCTTGGGCTCTGTaGTGGGCACACACCAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: GQGRCAREDMLGGQGFRKCSWAL*WAHTSR Trigger: GCGACTGGTGTGTGCCCAGCACAGAGCCCAAGAACA...CTTCCTAAAGCCTTGCCCACCCAGCATGTCCTCACGTGCACACCTCCCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | CACCTTGGGGGCAGCTTACTCCTAGGCCTGCCCTCTCGGTGGGCCCCGGGTGAGAGTTCAAAGAGCATGTaGTACAGGTGGGAAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: HLGGSLLLGLPSRWAPGESSKSM*YRWEGT Trigger: TGTCCCTTCCCACCTGTACCACATGCTCTTTGAACT...CTCACCCGGGGCCCACCGAGAGGGCAGGCCTAGGAGTAAGCTGCCCCCAAGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | GGGCAGGGGAGGTGTGCACGTGAGGACATGCTGGGTGGGCAAGGCTTTAGGAAGTGCCAGGCTGGGGTGTaGGAGCTGTGGAGTACATGT | + |
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Preference number: 4 (lower is better) Translates to: GQGRCAREDMLGGQGFRKCQAGV*ELWSTC Trigger: ACATGTACTCCACAGCTCCCACACCCCAGCCTGGCA...CTTCCTAAAGCCTTGCCCACCCAGCATGTCCTCACGTGCACACCTCCCCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR TCA 90 bp | GCCACCCCATCAGGGAGAGCCATCCCCAACCCTCAAGCATCACTATGGAAACCGGGATGGAGATGCGGCTaGGGTAGAAGCGGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ATPSGRAIPNPQASLWKPGWRCG*GRSGPG Trigger: TCCTGGACCGCTTCTACCTCAGCCGCATCTCCATCC...CGGTTTCCATAGTGATGCTTGAGGGTTGGGGATGGCTCTCCCTGATGGGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR GCA 90 bp | GGAGAGCCATCCCCAACCCTCAAGCATCACTATGGAAACCGGGTTCCAGGGAAACAGCTCTGCACCAGCTaGACCGATGGGGTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GEPSPTLKHHYGNRVPGKQLCTS*TDGVPS Trigger: GCTGGGCACCCCATCGGTGCAGCTGGTGCAGAGCTG...TTTCCCTGGAACCCGGTTTCCATAGTGATGCTTGAGGGTTGGGGATGGCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | GGGTTCCAGGGAAACCCCCTAGGGTTTCTCCACAGAGACATATTGGCACTTAGGCGCCGGCCTCCTGGATaGTCTGGTAGTGGCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GFQGNPLGFLHRDILALRRRPPG*SGSGAR Trigger: CCTGGCGCCACTACCAGACCATCCAGGAGGCCGGCG...CCTAAGTGCCAATATGTCTCTGTGGAGAAACCCTAGGGGGTTTCCCTGGAACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR GCA 90 bp | GGGCAGGGGAGGTGTGCACGTGAGGACATGCTGGGTGGGCAAGGCTTTAGGAAGAGTTGGGATCGATGCTaGCAATGTGTTTGGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GQGRCAREDMLGGQGFRKSWDRC*QCVWGG Trigger: CCCACCCCAAACACATTGGCAGCATCGATCCCAACT...CTTCCTAAAGCCTTGCCCACCCAGCATGTCCTCACGTGCACACCTCCCCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | GCCACCCCATCAGGGAGAGCCATCCCCAACCCTCAAGCATCACTATGGAAACCGCGTAGAGGCGGGAAATaGGGAGTCCGTACCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ATPSGRAIPNPQASLWKPRRGGK*GVRTQS Trigger: GCTTTGGGTACGGACTCCCCATTTCCCGCCTCTACG...CGGTTTCCATAGTGATGCTTGAGGGTTGGGGATGGCTCTCCCTGATGGGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | GGGCATAAGGCAAGCGGAGCAGCCACTTGGAAGGCCAGGACTATGCAGGCAGTGCGGTCCAGGAAGTACTaGATGTTCTGGTTGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: GHKASGAATWKARTMQAVRSRKY*MFWLET Trigger: CGTCTCCAACCAGAACATCCAGTACTTCCTGGACCG...CACTGCCTGCATAGTCCTGGCCTTCCAAGTGGCTGCTCCGCTTGCCTTATGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR TCA 90 bp | GCCACCCCATCAGGGAGAGCCATCCCCAACCCTCAAGCATCACTATGGAAACCGGGGCCTTCAGATAGATaGCAGCATCTGTCCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: ATPSGRAIPNPQASLWKPGPSDR*QHLSQS Trigger: GCTTTGGGACAGATGCTGTCATCTATCTGAAGGCCC...CGGTTTCCATAGTGATGCTTGAGGGTTGGGGATGGCTCTCCCTGATGGGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR GCA 90 bp | AGTTCTGATCTTGGGAGAAGTGTCTCTGGGCCACCCCATCAGGGAGAGCCATCCGTACTTGGGTGCCCCTaGCAGGGACGCATTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: SSDLGRSVSGPPHQGEPSVLGCP*QGRILQ Trigger: TTGAAGAATGCGTCCCTGGCAGGGGCACCCAAGTAC...GGATGGCTCTCCCTGATGGGGTGGCCCAGAGACACTTCTCCCAAGATCAGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR GCA 90 bp | CATCTGTTTACTGTGGATGTCACTGTCACCATCCCAGCCACTGGGAGGGCACACTGGACATACCAGCTCTaGACCAGCTGCACCGATGGG | + |
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Preference number: 4 (lower is better) Translates to: HLFTVDVTVTIPATGRAHWTYQL*TSCTDG Trigger: CCCATCGGTGCAGCTGGTGCAGAGCTGGTATGTCCA...GTGTGCCCTCCCAGTGGCTGGGATGGTGACAGTGACATCCACAGTAAACAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR GCA 90 bp | ACCACCACAGTTGGGCCACTGAGATTTCTACAAAGACAGATCTGGCCATCAGGGCTCCAGCACTCCCTGTaGCATGGTGGGCACCACGTC | + |
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Preference number: 4 (lower is better) Translates to: TTTVGPLRFLQRQIWPSGLQHSL*HGGHHV Trigger: GACGTGGTGCCCACCATGGCACAGGGAGTGCTGGAG...CCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGTGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | CCACTGAGATTTCTACAAAGACAGATCTGGCCATCAGGGAGACCCAGTTTCACCCACCAGCTGCACCGATaGGGTGCCCAGCACTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: PLRFLQRQIWPSGRPSFTHQLHR*GAQHSV Trigger: GACCGAGTGCTGGGCACCCCATCGGTGCAGCTGGTG...GGTGAAACTGGGTCTCCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR TCA 90 bp | TGGGGTCTGAAGCTCAGGCAGCATAGGGTGGGTGTAGACTGGGCAGGGGAGGTGCTCGGTCACTCATTTTaGTGGACAGATCTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: WGLKLRQHRVGVDWAGEVLGHSF*WTDLLH Trigger: GTGAAGAAGATCTGTCCATCAAAATGAGTGACCGAG...CACCTCCCCTGCCCAGTCTACACCCACCCTATGCTGCCTGAGCTTCAGACCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | ACCACCACAGTTGGGCCACTGAGATTTCTACAAAGACAGATCTGGCCATCAGGGAGTGCTCGATGTACTTaGGTGCCCCTGCCAGGGACG | + |
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Preference number: 4 (lower is better) Translates to: TTTVGPLRFLQRQIWPSGSARCT*VPLPGT Trigger: CGTCCCTGGCAGGGGCACCCAAGTACATCGAGCACT...CCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGTGGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | GGGCATAAGGCAAGCGGAGCAGCCACTTGGAAGGCCAGGACTATGCAGGCAGTGAAGTACTGGATGTTCTaGTTGGAGACGGGGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: GHKASGAATWKARTMQAVKYWMF*LETGSS Trigger: AGATGACCCCGTCTCCAACCAGAACATCCAGTACTT...CACTGCCTGCATAGTCCTGGCCTTCCAAGTGGCTGCTCCGCTTGCCTTATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGCCATCCCCAACCCTCAAGCATCACTATGGAAACCGGGTTCCAGGGAAAGTGTTTGGGGTGGGCTaGGTTGGTGCTGCCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: GEPSPTLKHHYGNRVPGKVFGVG*VGAAIK Trigger: TTTGATGGCAGCACCAACCCAGCCCACCCCAAACAC...TTTCCCTGGAACCCGGTTTCCATAGTGATGCTTGAGGGTTGGGGATGGCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | GGGTTCCAGGGAAACCCCCTAGGGTTTCTCCACAGAGACATATTGGCACTTAGGTGCTGCCAATGTGTTTaGGGTGGGCTGGGTTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GFQGNPLGFLHRDILALRCCQCV*GGLGWC Trigger: GCACCAACCCAGCCCACCCCAAACACATTGGCAGCA...CCTAAGTGCCAATATGTCTCTGTGGAGAAACCCTAGGGGGTTTCCCTGGAACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | TCTACAAAGACAGATCTGGCCATCAGGGAGACCCAGTTTCACCCCTTGTACCCTGCACTCCCTGTGCCATaGTGGGCACCACGTCATTGT | + |
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Preference number: 4 (lower is better) Translates to: STKTDLAIRETQFHPLYPALPVP*WAPRHC Trigger: ACAATGACGTGGTGCCCACCATGGCACAGGGAGTGC...AGGGTACAAGGGGTGAAACTGGGTCTCCCTGATGGCCAGATCTGTCTTTGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | TCTACAAAGACAGATCTGGCCATCAGGGAGACCCAGTTTCACCCCTTGTACCCTCCCCCTGGAAGTACTTaGCGTAGAGGCGGGAAATGG | + |
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Preference number: 4 (lower is better) Translates to: STKTDLAIRETQFHPLYPPPGST*RRGGKW Trigger: CCATTTCCCGCCTCTACGCCAAGTACTTCCAGGGGG...AGGGTACAAGGGGTGAAACTGGGTCTCCCTGATGGCCAGATCTGTCTTTGTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS-3UTR CCA 90 bp | CAAAGAACCCAGCCCAAATGTGCCTGTACAGTGTGTGGGCATAAGGCAAGCGGAGCTCCACTGAGTCCGTaGACAGGGCCTTCAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRTQPKCACTVCGHKASGAPLSP*TGPSDR Trigger: TCTATCTGAAGGCCCTGTCCACGGACTCAGTGGAGC...TCCGCTTGCCTTATGCCCACACACTGTACAGGCACATTTGGGCTGGGTTCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR GCA 90 bp | TGCAACTTCATACCATCCAGAGTAGAGATAGAGGCTGCAGGATCAGAGTCAAGGGGCACCACGTCATTGTaGCGGTTCCGGATGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: CNFIPSRVEIEAAGSESRGTTSL*RFRMVT Trigger: GGTCACCATCCGGAACCGGCACAATGACGTGGTGCC...CCTTGACTCTGATCCTGCAGCCTCTATCTCTACTCTGGATGGTATGAAGTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCCATCCCCAACCCTCAAGCATCACTATGGAAACCGGGTTCCAGGGAAAACTGGATGTTCTGGTTaGAGACGGGGTCATCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GEPSPTLKHHYGNRVPGKTGCSG*RRGHLH Trigger: ATGGAGATGACCCCGTCTCCAACCAGAACATCCAGT...TTTCCCTGGAACCCGGTTTCCATAGTGATGCTTGAGGGTTGGGGATGGCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| 3UTR CAA 72 bp | ACCAGGGCTTCTAGTAGAAAACAGACAGTTCTGATCTaGGGAGAAGTGTCTCTGGGCCACCCCATCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TRASSRKQTVLI*GEVSLGHPIRE Trigger: CTCCCTGATGGGGTGGCCCAGAGACACTTCTCCCAAGATCAGAACTGTCTGTTTTCTACTAGAAGCCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGAACCCAGCCCAAATGTGCCTGTACAGTGTGTGGGCATAAGGCAAGCGGAGAGAACTTGCTGAAGTaGTCGATGTACTTGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QRTQPKCACTVCGHKASGENLLK*SMYLGA Trigger: GGCACCCAAGTACATCGAGCACTTCAGCAAGTTCTC...TCCGCTTGCCTTATGCCCACACACTGTACAGGCACATTTGGGCTGGGTTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR TCA 90 bp | CCACTGAGATTTCTACAAAGACAGATCTGGCCATCAGGGAGACCCAGTTTCACCCCGGAGGAAAGTGAATaGCGTCTTCTCGCAGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: PLRFLQRQIWPSGRPSFTPEESE*RLLAGI Trigger: AATGCCTGCGAGAAGACGTCATTCACTTTCCTCCGG...GGTGAAACTGGGTCTCCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR TCA 90 bp | ACCACCACAGTTGGGCCACTGAGATTTCTACAAAGACAGATCTGGCCATCAGGGTGGAGTACATGTAGCTaGAGAGCCTCTCGATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTTVGPLRFLQRQIWPSGWSTCS*RASRSS Trigger: GGAAGATCGAGAGGCTCTTCAGCTACATGTACTCCA...CCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGTGGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR GCA 90 bp | TCCCAATTGCAACTTCATACCATCCAGAGTAGAGATAGAGGCTGCAGGATCAGACGAACGGGCAGCTCCTaGCGGAGGAAAGTGAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLQLHTIQSRDRGCRIRRTGSS*RRKVND Trigger: GTCATTCACTTTCCTCCGGCAGGAGCTGCCCGTTCG...TCTGATCCTGCAGCCTCTATCTCTACTCTGGATGGTATGAAGTTGCAATTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGAGATTTCTACAAAGACAGATCTGGCCATCAGGGAGACCCAGTTTCACCGTGGCATTGACTTCCTaGATCTCCAGGTCAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLRFLQRQIWPSGRPSFTVALTS*ISRSGE Trigger: TTCCCCTGACCTGGAGATCCAGGAAGTCAATGCCAC...GGTGAAACTGGGTCTCCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CCA 90 bp | CACTCCATCCTTCTTAACATTGACAAAGAACCCAGCCCAAATGTGCCTGTACAGACGTCGATGTGTTCTTaGGCTCTGTGCTGGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HSILLNIDKEPSPNVPVQTSMCS*ALCWAH Trigger: GTGTGCCCAGCACAGAGCCCAAGAACACATCGACGT...CTGTACAGGCACATTTGGGCTGGGTTCTTTGTCAATGTTAAGAAGGATGGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR TCA 90 bp | CACTCCATCCTTCTTAACATTGACAAAGAACCCAGCCCAAATGTGCCTGTACAGACGGGGAGAACTTGCTaGAGTGCTCGATGTACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSILLNIDKEPSPNVPVQTGRTC*SARCTW Trigger: CCAAGTACATCGAGCACTTCAGCAAGTTCTCCCCGT...CTGTACAGGCACATTTGGGCTGGGTTCTTTGTCAATGTTAAGAAGGATGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| 3UTR CAA 72 bp | CTCTCCAGACTTGAGGGCACTCCATCCTTCTTAACATaGACAAAGAACCCAGCCCAAATGTGCCTGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSRLEGTPSFLT*TKNPAQMCLYS Trigger: ACTGTACAGGCACATTTGGGCTGGGTTCTTTGTCAATGTTAAGAAGGATGGAGTGCCCTCAAGTCTGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| 3UTR CAA 72 bp | CCGGGTGAGAATCGCTACCTACTCTCAAGTTCCCAATaGCAACTTCATACCATCCAGAGTAGAGATAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGENRYLLSSSQ*QLHTIQSRDRG Trigger: GCCTCTATCTCTACTCTGGATGGTATGAAGTTGCAATTGGGAACTTGAGAGTAGGTAGCGATTCTCACCCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR TCA 90 bp | CCATCCTTCTTAACATTGACAAAGAACCCAGCCCAAATGTGCCTGTACAGTGTGTGTCCAGGAATTCCATaGTGTCCAGCAGACTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSFLTLTKNPAQMCLYSVCPGIP*CPADSG Trigger: TCCAGAGTCTGCTGGACATCATGGAATTCCTGGACA...CACACTGTACAGGCACATTTGGGCTGGGTTCTTTGTCAATGTTAAGAAGGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CCA 90 bp | TCTTGGGCTCTGTGCTGGGCACACACCAGTCGCCGGCCTCCTGGATaGTCTGGTAGTGGCGCCAGGCAGACTTGTTGTAGACAGGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SWALCWAHTSRRPPG*SGSGARQTCCRQAG Trigger: GCCTGCCTGTCTACAACAAGTCTGCCTGGCGCCACTACCAGACCATCCAGGAGGCCGGCGACTGGTGTGTGCCCAGCACAGAGCCCAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS GCA 90 bp | GACGGGGTCATCTCCATAGGTGTCCTTGTACTCCAGCACTCCCTGTaGCATGGTGGGCACCACGTCATTGTGCCGGTTCCGGATGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: DGVISIGVLVLQHSL*HGGHHVIVPVPDGD Trigger: GTCACCATCCGGAACCGGCACAATGACGTGGTGCCCACCATGGCACAGGGAGTGCTGGAGTACAAGGACACCTATGGAGATGACCCCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGATCTTGGGAGAAGTGTCTCTGGGCCACCCCATCAGGGAGAGCCATCCGTGGGCACCACGTCATaGTGCCGGTTCCGGATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSDLGRSVSGPPHQGEPSVGTTS*CRFRMV Trigger: CACCATCCGGAACCGGCACAATGACGTGGTGCCCAC...GGATGGCTCTCCCTGATGGGGTGGCCCAGAGACACTTCTCCCAAGATCAGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGTCTGAAGCTCAGGCAGCATAGGGTGGGTGTAGACTGGGCAGGGGAGGTGGTCTTCTCGCAGGCATaGCTGGATCCGAAGTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: WGLKLRQHRVGVDWAGEVVFSQA*LDPKSR Trigger: TCTAGACTTCGGATCCAGCAATGCCTGCGAGAAGAC...CACCTCCCCTGCCCAGTCTACACCCACCCTATGCTGCCTGAGCTTCAGACCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS GCA 90 bp | TTGTACTCCAGCACTCCCTGTGCCATGGTGGGCACCACGTCATTGTaGCGGTTCCGGATGGTGACCAGGGCATCTGTGAACTGGCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYSSTPCAMVGTTSL*RFRMVTRASVNWLR Trigger: TCTAAGCCAGTTCACAGATGCCCTGGTCACCATCCGGAACCGGCACAATGACGTGGTGCCCACCATGGCACAGGGAGTGCTGGAGTACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGGAGAGCCATCCCCAACCCTCAAGCATCACTATGGAAACCGGGTTCCAGGGGGGACGGGGAGAACTaGCTGAAGTGCTCGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGRAIPNPQASLWKPGSRGDGEN*LKCSMY Trigger: GTACATCGAGCACTTCAGCAAGTTCTCCCCGTCCCC...CCTGGAACCCGGTTTCCATAGTGATGCTTGAGGGTTGGGGATGGCTCTCCCTGA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGTACAGTGTGTGGGCATAAGGCAAGCGGAGCAGCCACTTGGAAGGCCAGGTACTGGATGTTCTGGTaGGAGACGGGGTCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ACTVCGHKASGAATWKARYWMFW*ETGSSP Trigger: TGGAGATGACCCCGTCTCCAACCAGAACATCCAGTA...CCTGGCCTTCCAAGTGGCTGCTCCGCTTGCCTTATGCCCACACACTGTACAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | GGGTTCCAGGGAAACCCCCTAGGGTTTCTCCACAGAGACATATTGGCACTTAGGAAGTGCTCGATGTACTaGGGTGCCCCTGCCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GFQGNPLGFLHRDILALRKCSMY*GAPARD Trigger: GTCCCTGGCAGGGGCACCCAAGTACATCGAGCACTT...CCTAAGTGCCAATATGTCTCTGTGGAGAAACCCTAGGGGGTTTCCCTGGAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTGTGTGGGCATAAGGCAAGCGGAGCAGCCACTTGGAAGGCCAGGACTATGTACGTCGATGTGTTCTaGGGCTCTGTGCTGGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TVCGHKASGAATWKARTMYVDVF*GSVLGT Trigger: TGTGCCCAGCACAGAGCCCAAGAACACATCGACGTA...CATAGTCCTGGCCTTCCAAGTGGCTGCTCCGCTTGCCTTATGCCCACACACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | CATCTGTTTACTGTGGATGTCACTGTCACCATCCCAGCCACTGGGAGGGCACACTCAGACACGCTGCAGTaGGGATCGATGCTGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: HLFTVDVTVTIPATGRAHSDTLQ*GSMLPM Trigger: CATTGGCAGCATCGATCCCAACTGCAGCGTGTCTGA...GTGTGCCCTCCCAGTGGCTGGGATGGTGACAGTGACATCCACAGTAAACAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS GCA 90 bp | AGGTTGATCTCTTTCATGATGTTGGCCAGGCGAACGGGCAGCTCCTaGCGGAGGAAAGTGAATGACGTCTTCTCGCAGGCATTGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLISFMMLARRTGSS*RRKVNDVFSQALLD Trigger: ATCCAGCAATGCCTGCGAGAAGACGTCATTCACTTTCCTCCGGCAGGAGCTGCCCGTTCGCCTGGCCAACATCATGAAAGAGATCAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | ACCACCACAGTTGGGCCACTGAGATTTCTACAAAGACAGATCTGGCCATCAGGGTGGTCCTCGGGGTCTTaGTCCAGGAATTCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: TTTVGPLRFLQRQIWPSGWSSGS*SRNSMM Trigger: CATCATGGAATTCCTGGACAAAGACCCCGAGGACCA...CCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGTGGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | TGCAACTTCATACCATCCAGAGTAGAGATAGAGGCTGCAGGATCAGAGTCAAGGATCTCTTTCATGATGTaGGCCAGGCGAACGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CNFIPSRVEIEAAGSESRISFMM*ARRTGS Trigger: GCTGCCCGTTCGCCTGGCCAACATCATGAAAGAGAT...CCTTGACTCTGATCCTGCAGCCTCTATCTCTACTCTGGATGGTATGAAGTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGCTTCTAGTAGAAAACAGACAGTTCTGATCTTGGGAGAAGTGTCTCTGATGCTGCCAATGTGTTaGGGGTGGGCTGGGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TRASSRKQTVLILGEVSLMLPMC*GWAGLV Trigger: CACCAACCCAGCCCACCCCAAACACATTGGCAGCAT...CAGAGACACTTCTCCCAAGATCAGAACTGTCTGTTTTCTACTAGAAGCCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | ACCACCACAGTTGGGCCACTGAGATTTCTACAAAGACAGATCTGGCCATCAGGGCGGTCAGGAAGCAGGTaGATCTCTTTCATGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TTTVGPLRFLQRQIWPSGRSGSR*ISFMML Trigger: CAACATCATGAAAGAGATCAACCTGCTTCCTGACCG...CCCTGATGGCCAGATCTGTCTTTGTAGAAATCTCAGTGGCCCAACTGTGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS-3UTR CAA 90 bp | CACTCCATCCTTCTTAACATTGACAAAGAACCCAGCCCAAATGTGCCTGTACAGCCTCGGTCACTCATTTaGATGGACAGATCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HSILLNIDKEPSPNVPVQPRSLI*MDRSSS Trigger: TGAAGAAGATCTGTCCATCAAAATGAGTGACCGAGG...CTGTACAGGCACATTTGGGCTGGGTTCTTTGTCAATGTTAAGAAGGATGGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS GCA 72 bp | TCCAGCAGACTCTGGACATACCAGCTCTGCACCAGCTaGACCGATGGGGTGCCCAGCACTCGGTCAGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRLWTYQLCTS*TDGVPSTRSGS Trigger: GCTTCCTGACCGAGTGCTGGGCACCCCATCGGTGCAGCTGGTGCAGAGCTGGTATGTCCAGAGTCTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CCA 72 bp | AGTCCCCCTGGAAGTACTTGGCGTAGAGGCGGGAAATaGGGAGTCCGTACCCAAAGCCAGCCAGCGGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SPPGSTWRRGGK*GVRTQSQPAGY Trigger: GTACCCCGCTGGCTGGCTTTGGGTACGGACTCCCCATTTCCCGCCTCTACGCCAAGTACTTCCAGGGGGACT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CCA 72 bp | CTGTGCTGGGCACACACCAGTCGCCGGCCTCCTGGATaGTCTGGTAGTGGCGCCAGGCAGACTTGTTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LCWAHTSRRPPG*SGSGARQTCCR Trigger: TCTACAACAAGTCTGCCTGGCGCCACTACCAGACCATCCAGGAGGCCGGCGACTGGTGTGTGCCCAGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CAA 72 bp | TCCAGCACTCCCTGTGCCATGGTGGGCACCACGTCATaGTGCCGGTTCCGGATGGTGACCAGGGCATCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSTPCAMVGTTS*CRFRMVTRASV Trigger: CACAGATGCCCTGGTCACCATCCGGAACCGGCACAATGACGTGGTGCCCACCATGGCACAGGGAGTGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CAA 90 bp | ACCAGCTGCACCGATGGGGTGCCCAGCACTCGGTCAGGAAGCAGGTaGATCTCTTTCATGATGTTGGCCAGGCGAACGGGCAGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TSCTDGVPSTRSGSR*ISFMMLARRTGSSC Trigger: GCAGGAGCTGCCCGTTCGCCTGGCCAACATCATGAAAGAGATCAACCTGCTTCCTGACCGAGTGCTGGGCACCCCATCGGTGCAGCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS TCA 72 bp | TGGCCAGGCGAACGGGCAGCTCCTGCCGGAGGAAAGTaGATGACGTCTTCTCGCAGGCATTGCTGGATCCGA | + |
|
Preference number: 6 (lower is better) Translates to: WPGERAAPAGGK*MTSSRRHCWIR Trigger: TCGGATCCAGCAATGCCTGCGAGAAGACGTCATTCACTTTCCTCCGGCAGGAGCTGCCCGTTCGCCTGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS GCA 72 bp | AGCACTCCCTGTGCCATGGTGGGCACCACGTCATTGTaGCGGTTCCGGATGGTGACCAGGGCATCTGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: STPCAMVGTTSL*RFRMVTRASVN Trigger: GTTCACAGATGCCCTGGTCACCATCCGGAACCGGCACAATGACGTGGTGCCCACCATGGCACAGGGAGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS GCA 72 bp | GAACTTGCTGAAGTGCTCGATGTACTTGGGTGCCCCTaGCAGGGACGCATTCTTCAACAGCGCCCGGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: ELAEVLDVLGCP*QGRILQQRPDP Trigger: TGGGTCCGGGCGCTGTTGAAGAATGCGTCCCTGGCAGGGGCACCCAAGTACATCGAGCACTTCAGCAAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CCA 72 bp | CATAGGTGTCCTTGTACTCCAGCACTCCCTGTGCCATaGTGGGCACCACGTCATTGTGCCGGTTCCGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: HRCPCTPALPVP*WAPRHCAGSGW Trigger: CCATCCGGAACCGGCACAATGACGTGGTGCCCACCATGGCACAGGGAGTGCTGGAGTACAAGGACACCTATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CAA 72 bp | ACCGATGGGGTGCCCAGCACTCGGTCAGGAAGCAGGTaGATCTCTTTCATGATGTTGGCCAGGCGAACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: TDGVPSTRSGSR*ISFMMLARRTG Trigger: GCCCGTTCGCCTGGCCAACATCATGAAAGAGATCAACCTGCTTCCTGACCGAGTGCTGGGCACCCCATCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CAA 90 bp | TCCTTGTACTCCAGCACTCCCTGTGCCATGGTGGGCACCACGTCATaGTGCCGGTTCCGGATGGTGACCAGGGCATCTGTGAACTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SLYSSTPCAMVGTTS*CRFRMVTRASVNWL Trigger: AAGCCAGTTCACAGATGCCCTGGTCACCATCCGGAACCGGCACAATGACGTGGTGCCCACCATGGCACAGGGAGTGCTGGAGTACAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS GCA 72 bp | ATCTCCATAGGTGTCCTTGTACTCCAGCACTCCCTGTaGCATGGTGGGCACCACGTCATTGTGCCGGTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ISIGVLVLQHSL*HGGHHVIVPVP Trigger: CGGAACCGGCACAATGACGTGGTGCCCACCATGGCACAGGGAGTGCTGGAGTACAAGGACACCTATGGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS GCA 72 bp | TCACCACATCAGACACGCTGCAGTTGGGATCGATGCTaGCAATGTGTTTGGGGTGGGCTGGGTTGGTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPHQTRCSWDRC*QCVWGGLGWCC Trigger: GCAGCACCAACCCAGCCCACCCCAAACACATTGGCAGCATCGATCCCAACTGCAGCGTGTCTGATGTGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS TCA 72 bp | TCCGGTGGTCCTCGGGGTCTTTGTCCAGGAATTCCATaGTGTCCAGCAGACTCTGGACATACCAGCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SGGPRGLCPGIP*CPADSGHTSSA Trigger: TGCAGAGCTGGTATGTCCAGAGTCTGCTGGACATCATGGAATTCCTGGACAAAGACCCCGAGGACCACCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CCA 72 bp | GTGACCAGGGCATCTGTGAACTGGCTTAGAGTCCGGTaGTCCTCGGGGTCTTTGTCCAGGAATTCCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: VTRASVNWLRVR*SSGSLSRNSMM Trigger: CATCATGGAATTCCTGGACAAAGACCCCGAGGACCACCGGACTCTAAGCCAGTTCACAGATGCCCTGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CAA 72 bp | GTGAACTGGCTTAGAGTCCGGTGGTCCTCGGGGTCTTaGTCCAGGAATTCCATGATGTCCAGCAGACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VNWLRVRWSSGS*SRNSMMSSRLW Trigger: CCAGAGTCTGCTGGACATCATGGAATTCCTGGACAAAGACCCCGAGGACCACCGGACTCTAAGCCAGTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS CAA 90 bp | AGGGCATCTGTGAACTGGCTTAGAGTCCGGTGGTCCTCGGGGTCTTaGTCCAGGAATTCCATGATGTCCAGCAGACTCTGGACATACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RASVNWLRVRWSSGS*SRNSMMSSRLWTYQ Trigger: CTGGTATGTCCAGAGTCTGCTGGACATCATGGAATTCCTGGACAAAGACCCCGAGGACCACCGGACTCTAAGCCAGTTCACAGATGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
||
| CDS GCA 72 bp | TTCTCGCAGGCATTGCTGGATCCGAAGTCTAGAAACTaGTTCATGGACAACGGGGACGGGGAGAACTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FSQALLDPKSRN*FMDNGDGENLL Trigger: CAGCAAGTTCTCCCCGTCCCCGTTGTCCATGAAGCAGTTTCTAGACTTCGGATCCAGCAATGCCTGCGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS CCA 72 bp | GGTAGAAGCGGTCCAGGAAGTACTGGATGTTCTGGTTaGAGACGGGGTCATCTCCATAGGTGTCCTTGTACT | + |
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Preference number: 6 (lower is better) Translates to: GRSGPGSTGCSG*RRGHLHRCPCT Trigger: AGTACAAGGACACCTATGGAGATGACCCCGTCTCCAACCAGAACATCCAGTACTTCCTGGACCGCTTCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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| CDS CAA 72 bp | TGCCGGAGGAAAGTGAATGACGTCTTCTCGCAGGCATaGCTGGATCCGAAGTCTAGAAACTGCTTCATGGAC | + |
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Preference number: 6 (lower is better) Translates to: CRRKVNDVFSQA*LDPKSRNCFMD Trigger: GTCCATGAAGCAGTTTCTAGACTTCGGATCCAGCAATGCCTGCGAGAAGACGTCATTCACTTTCCTCCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038431.8 |
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