Pregenerated sensors for PDILT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030968Ensembl transcript IDs: ENSMUST00000033267.4, ENSMUST00000208275.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCGGTGGGCATTTTGTACCTGCCGTCAGAGCTTAAGTTCAGGATTTaGACAGATGGGACATTGACTCTTGAGATCTGGAAGTACTCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: SVGILYLPSELKFRI*TDGTLTLEIWKYSK Trigger: CTTTGAGTACTTCCAGATCTCAAGAGTCAATGTCCCATCTGTTCAAATCCTGAACTTAAGCTCTGACGGCAGGTACAAAATGCCCACCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGTTTATGTCGTCGGTGGGCATTTTGTACCTGCCGTCAGAGCTTAAGTTCAGAACAGATGGGACATTaGCTCTTGAGATCTGGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: QSLCRRWAFCTCRQSLSSEQMGH*LLRSGS Trigger: ACTTCCAGATCTCAAGAGTCAATGTCCCATCTGTTC...TGAACTTAAGCTCTGACGGCAGGTACAAAATGCCCACCGACGACATAAACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGTGTTTCTTGGCAGTTTTGCTGAGGAAGCTGTTGCAGAACTTTTTGAGGCTTAGTTTATGTCGTCGGTaGGCATTTTGTACCTGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: LCFLAVLLRKLLQNFLRLSLCRR*AFCTCR Trigger: ACGGCAGGTACAAAATGCCCACCGACGACATAAACT...AAGCCTCAAAAAGTTCTGCAACAGCTTCCTCAGCAAAACTGCCAAGAAACACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR TCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGGCTGTTCCTTCGGCTaGGCTGCCGCCGCCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWGCSFG*AAAASL Trigger: GAGGGAGGCGGCGGCAGCTCAGCCGAAGGAACAGCC...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR GCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGAGATCTCTGCGGCTTTaGCCAGCTCCTTGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWRSLRL*PAPWPA Trigger: AGCTGGCCAAGGAGCTGGGCAAAGCCGCAGAGATCT...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR GCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGCTTCCCGAAGATCTCTaGGGCTTTGCCCAGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWLPEDL*GFAQLL Trigger: AAGGAGCTGGGCAAAGCCGCAGAGATCTTCGGGAAG...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGGAAGAAGCCAACGATaGCCAAGGGCCTGGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWGRSQR*PRAWIS Trigger: TGAAATCCAGGCCCTTGGTCATCGTTGGCTTCTTCC...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCGTTCCGTCTCCTTGGTaGTGTCCACTTTGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPVPSPW*CPLCQS Trigger: GCTTTGGCAAAGTGGACATCACCAAGGAGACGGAAC...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCATTCCGGGGCATGGGTaGTGTCAAACTCCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPIPGHG*CQTPAE Trigger: TTCAGCAGGAGTTTGACATCACCCATGCCCCGGAAT...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGGTGCTGTACGGCTCTaGGCTTTTGGAGATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWGAVRL*AFGDKE Trigger: CTCTTTATCTCCAAAAGCTCAGAGCCGTACAGCACC...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCCAAGGACGACCACATTaGAGTTCTTCCCCACGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPQGRPH*SSSPRA Trigger: AGCTCGTGGGGAAGAACTTCAATGTGGTCGTCCTTG...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR GCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCGTGGTAACAGCACCCTaGATTTCTCAGACCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPVVTAP*ISQTRE Trigger: CTCCCTGGTCTGAGAAATGCAGGGTGCTGTTACCAC...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCATGTCAAACTCCTGCTaGAGTTCCGTCTCCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPMSNSC*SSVSLV Trigger: CACCAAGGAGACGGAACTTCAGCAGGAGTTTGACAT...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCCATGACAGCCTCTTGTaGGTCAGTAGGGAAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPHDSLL*VSREKP Trigger: AGGCTTTTCCCTACTGACTCACAAGAGGCTGTCATG...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTTCAATTCCGGGGCATaGGTGATGTCAAACTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPFNSGA*VMSNSC Trigger: GCAGGAGTTTGACATCACCCATGCCCCGGAATTGAA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGAGTTTATGTCGTCGGTaGGCATTTTGTACCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWSLCRR*AFCTCR Trigger: ACGGCAGGTACAAAATGCCCACCGACGACATAAACT...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTCTTGGCAGTTTTGCTaGGGAAGCTGTTGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPSWQFC*GSCCRT Trigger: AGTTCTGCAACAGCTTCCTCAGCAAAACTGCCAAGA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTCTGGGTTTGCCAGCTaGATGTCATTTGCCGTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPSGFAS*MSFAVM Trigger: CATAACGGCAAATGACATTCAGCTGGCAAACCCAGA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGAACTTCTCTATGAGCTaGATCTCTGGCTCAGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWNFSMS*ISGSAN Trigger: GTTAGCTGAGCCAGAGATTCAGCTCATAGAGAAGTT...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGTTGTGTCCTCTATTTTaGGCAGTGGATTCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWLCPLF*AVDSQA Trigger: TGCCTGAGAATCCACTGCTCAAAATAGAGGACACAA...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | GCATTCACCAGGACGAAAAGAATTCTCAGGCCATTCATCCATCCAAAGGTTTGCGTTCTGATGGCTCTCTaGGTTCCTCACCCCTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFTRTKRILRPFIHPKVCVLMAL*VPHPSA Trigger: AGCAGAGGGGTGAGGAACTCAGAGAGCCATCAGAAC...GCAAACCTTTGGATGGATGAATGGCCTGAGAATTCTTTTCGTCCTGGTGAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR CCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGTCTTCCTCTAAATCCTaGAAGAAGCCAACGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWSSSKS*KKPTMT Trigger: GGTCATCGTTGGCTTCTTCCAGGATTTAGAGGAAGA...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGAGGAGACTCTTTCACTaGCCTGTCTTGTTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWRRLFH*PVLFAC Trigger: ACAAGCAAACAAGACAGGCCAGTGAAAGAGTCTCCT...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTCTCTCCGGCTCTTCTaGCTTTCTTATACTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPSLRLF*LSYTVQ Trigger: CTGGACAGTATAAGAAAGCCAGAAGAGCCGGAGAGA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGAGCACCATTAAGTTATaGTCCTCCAGGATGTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWSTIKL*SSRMCK Trigger: TTTGCACATCCTGGAGGATCATAACTTAATGGTGCT...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGCTTCATCGCTGTTGTTaGACAAAAGTGCTTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWLHRCC*TKVLSC Trigger: GCAAGAAAGCACTTTTGTTCAACAACAGCGATGAAG...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGTGGGACATTGACTCTTaGGATCTGGAAGTACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWWDIDS*DLEVLK Trigger: TTTGAGTACTTCCAGATCTCAAGAGTCAATGTCCCA...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCGAACAGATGGGACATTaGCTCTTGAGATCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPEQMGH*LLRSGS Trigger: ACTTCCAGATCTCAAGAGTCAATGTCCCATCTGTTC...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR GCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGCTTTAACCTGTTaGCCTCAAAGAACAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPWALTC*PQRTAS Trigger: TGAAGCTGTTCTTTGAGGGCAACAGGTTAAAGCCCA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR GCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGCATTTTGTACCTaGCGTCAGAGCTTAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPWAFCT*RQSLSS Trigger: TGAACTTAAGCTCTGACGGCAGGTACAAAATGCCCA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR GCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGGTTTTGATACTTTATaGCCAACTCTTCCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWGFDTL*PTLPAV Trigger: CACTGCTGGAAGAGTTGGGCATAAAGTATCAAAACC...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR GCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCGTACTGTTCTGGGTTTaGCAGCTGAATGTCATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPVLFWV*QLNVIC Trigger: GCAAATGACATTCAGCTGGCAAACCCAGAACAGTAC...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGTTCTTCACTGGCCCTTaGTCCCAATATTTTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWFFTGP*SQYFGI Trigger: GATTCCAAAATATTGGGACCAAGGGCCAGTGAAGAA...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | GTTCATCCGCATTCACCAGGACGAAAAGAATTCTCAGGCCATTCATCCATCCAAGGTGCTGTACGGCTCTaGGCTTTTGGAGATAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VHPHSPGRKEFSGHSSIQGAVRL*AFGDKE Trigger: CTCTTTATCTCCAAAAGCTCAGAGCCGTACAGCACC...TTGGATGGATGAATGGCCTGAGAATTCTTTTCGTCCTGGTGAATGCGGATGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR GCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGCAGCTGAATGTCATTTaGCGTTATGTCAATCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWQLNVI*RYVNLS Trigger: GCTAAGATTGACATAACGGCAAATGACATTCAGCTG...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCATCCTAACCTTGACATaGCTTTCCAGGAAGTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPILTLT*LSRKSQ Trigger: TTGTGACTTCCTGGAAAGCCATGTCAAGGTTAGGAT...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCGTTCTGGGAAGTCCTTaGTGGTGTCATAGAATAATT | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPVLGSP*WCHRII Trigger: AATTATTCTATGACACCATCAAGGACTTCCCAGAAC...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGTCATTAATAAGCTCTTaGCGTTTCACGATTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RSTQKLMSGPGTGILAPWSLISS*RFTIFP Trigger: GGGAAAAATCGTGAAACGTCAAGAGCTTATTAATGA...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR TCA 90 bp | TCAAAGTTTATGTCGTCGGTGGGCATTTTGTACCTGCCGTCAGAGCTTAAGTTCCCCTTTATTGTGTTCTaGTGGCTCTCTGAGTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKFMSSVGILYLPSELKFPFIVF*WLSEFL Trigger: GAGGAACTCAGAGAGCCATCAGAACACAATAAAGGG...GAACTTAAGCTCTGACGGCAGGTACAAAATGCCCACCGACGACATAAACTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR GCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCGTTCTGGAATTCCTTTaGAATTTGTCTGTAATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPVLEFL*NLSVMP Trigger: CGGCATTACAGACAAATTGCAAAGGAATTCCAGAAC...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCATAAAGAGCAGCATGTaGTTCAAGATGTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPIKSSM*FKMFSS Trigger: TGAGCTGAACATCTTGAACCACATGCTGCTCTTTAT...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCCACAAAAGCCCTTCATaGTGTGTTCTCCTTTATACA | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPHKSPS*CVLLYT Trigger: TGTATAAAGGAGAACACACCATGAAGGGCTTTTGTG...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| 3UTR CAA 72 bp | GAAAAGAATTCTCAGGCCATTCATCCATCCAAAGGTTaGCCCACAAGAGTCAATGCGCCAGTCTTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: EKNSQAIHPSKG*PTRVNAPVFWV Trigger: AACCCAGAAGACTGGCGCATTGACTCTTGTGGGCAAACCTTTGGATGGATGAATGGCCTGAGAATTCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR GCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTCCTCCTCTTCATTTTaGTCAATGTACAATAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPSSSSF*SMYNSS Trigger: TGAGCTATTGTACATTGAGCAAAATGAAGAGGAGGA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CCA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTTTAAGGATGGGTTGTaGAAAATCACCATTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSTQKLMSGPGTGILAPFKDGL*KITIRK Trigger: CTTCCTAATGGTGATTTTCCACAACCCATCCTTAAA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| 3UTR CAA 72 bp | TTGGCAGTTTTGCTGAGGAAGCTGTTGCAGAACTTTTaGAGGCTTTCAAAGTTTATGTCGTCGGTGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LAVLLRKLLQNF*RLSKFMSSVGI Trigger: AATGCCCACCGACGACATAAACTTTGAAAGCCTCAAAAAGTTCTGCAACAGCTTCCTCAGCAAAACTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR GCA 90 bp | CCGCATTCACCAGGACGAAAAGAATTCTCAGGCCATTCATCCATCCAAAGGTTTGTTCTGGAATTCCTTTaGAATTTGTCTGTAATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PHSPGRKEFSGHSSIQRFVLEFL*NLSVMP Trigger: CGGCATTACAGACAAATTGCAAAGGAATTCCAGAAC...AAACCTTTGGATGGATGAATGGCCTGAGAATTCTTTTCGTCCTGGTGAATGCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTTGAGGCTTTCAAAGTTTATGTCGTCGGTGGGCATTTTGTACCTGCCGTCATAAAGAGCAGCATGTaGTTCAAGATGTTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LFEAFKVYVVGGHFVPAVIKSSM*FKMFSS Trigger: TGAGCTGAACATCTTGAACCACATGCTGCTCTTTAT...GACGGCAGGTACAAAATGCCCACCGACGACATAAACTTTGAAAGCCTCAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGATCTGGAAGTACTCAAAGATGCGTTTGTTTTTAGGTTCATCCGCATTCTCATTAATAAGCTCTTaGCGTTTCACGATTTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LEIWKYSKMRLFLGSSAFSLISS*RFTIFP Trigger: GGGAAAAATCGTGAAACGTCAAGAGCTTATTAATGA...GAATGCGGATGAACCTAAAAACAAACGCATCTTTGAGTACTTCCAGATCTCAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGCTTTGCCCAGCTCCTaGGCCAGCTTCCTGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWALPSS*ASFLDC Trigger: ACAGTCCAGGAAGCTGGCCAAGGAGCTGGGCAAAGC...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS GCA 90 bp | CAAAGCCCAAGCCATTCTTGCCCTTCCCGAAGATCTCTGCGGCTTTaGCCAGCTCCTTGGCCAGCTTCCTGGACTGTTTTAAGGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QSPSHSCPSRRSLRL*PAPWPASWTVLRMG Trigger: ACCCATCCTTAAAACAGTCCAGGAAGCTGGCCAAGGAGCTGGGCAAAGCCGCAGAGATCTTCGGGAAGGGCAAGAATGGCTTGGGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGAAGCCCAAGCCATTCTaGCCCTTCCCGAAGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWKPKPF*PFPKIS Trigger: AGAGATCTTCGGGAAGGGCAAGAATGGCTTGGGCTT...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTCAAGGACGACCACATaGAAGTTCTTCCCCACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPSRTTT*KFFPTS Trigger: GCTCGTGGGGAAGAACTTCAATGTGGTCGTCCTTGA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGTTTTCTCTCTGGTTTaGGCTGTTCCTTCGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWVFSLV*AVPSAE Trigger: CTCAGCCGAAGGAACAGCCAAAACCAGAGAGAAAAC...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 90 bp | CCATTAAGTTATGATCCTCCAGGATGTGCAAAGGCTGGGAAATGTTaGTGCCCGTGTCTATCTCTGGTGAGCCAAGGACCTCTGAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PLSYDPPGCAKAGKC*CPCLSLVSQGPLRG Trigger: GCCTCTCAGAGGTCCTTGGCTCACCAGAGATAGACACGGGCATCAACATTTCCCAGCCTTTGCACATCCTGGAGGATCATAACTTAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTTGGTGATGTCCACTTaGCCAAAGCCCAAGCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPLVMST*PKPKPF Trigger: GAATGGCTTGGGCTTTGGCAAAGTGGACATCACCAA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGATGGGCTTTAACCTGTaGCCCTCAAAGAACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWMGFNL*PSKNSF Trigger: GAAGCTGTTCTTTGAGGGCAACAGGTTAAAGCCCAT...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGCTGGCTTTGTGTTTCTaGGCAGTTTTGCTGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWLALCF*AVLLRK Trigger: CTTCCTCAGCAAAACTGCCAAGAAACACAAAGCCAG...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGCCACTTCATCGCTGTaGTTGAACAAAAGTGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWATSSL*LNKSAF Trigger: GAAAGCACTTTTGTTCAACAACAGCGATGAAGTGGC...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTACGGCTCTGAGCTTTaGGAGATAAAGAGCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPYGSEL*EIKSSM Trigger: CATGCTGCTCTTTATCTCCAAAAGCTCAGAGCCGTA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGTTGCTGAGGAAGCTGTaGCAGAACTTTTTGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWLLRKL*QNFLRL Trigger: AAGCCTCAAAAAGTTCTGCAACAGCTTCCTCAGCAA...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGTTTCTTGGCAGTTTaGCTGAGGAAGCTGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPCFLAV*LRKLLQ Trigger: CTGCAACAGCTTCCTCAGCAAAACTGCCAAGAAACA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCGATTCAACCACATCTTaGCAGCTGATGGGCTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPDSTTS*QLMGFN Trigger: GTTAAAGCCCATCAGCTGCAAAGATGTGGTTGAATC...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGAAAGCCTGTGAGCTGTaGCTTTATGACTTGATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWKACEL*LYDLIE Trigger: CTCAATCAAGTCATAAAGCAACAGCTCACAGGCTTT...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCACTGGCCTGTCTTGTTaGCTTGTGTCCTCTATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPTGLSC*LVSSIL Trigger: CAAAATAGAGGACACAAGCAAACAAGACAGGCCAGT...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTTTCACTGGCCTGTCTaGTTTGCTTGTGTCCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPFHWPV*FACVLY Trigger: ATAGAGGACACAAGCAAACAAGACAGGCCAGTGAAA...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 90 bp | AGAACATCACAAACACGTCCTTTTCCTTATCAAGGACGACCACATTaGAGTTCTTCCCCACGAGCTTCTTCACTGGCCCTTGGTCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RTSQTRPFPYQGRPH*SSSPRASSLALGPN Trigger: ATTGGGACCAAGGGCCAGTGAAGAAGCTCGTGGGGAAGAACTTCAATGTGGTCGTCCTTGATAAGGAAAAGGACGTGTTTGTGATGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGGAATTCCTTTGCAATTaGTCTGTAATGCCGGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWEFLCN*SVMPAY Trigger: ATAAGCCGGCATTACAGACAAATTGCAAAGGAATTC...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCATCTCTTCACTGGCTTaGTGTTTCTTGGCAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPISSLA*CFLAVL Trigger: CAAAACTGCCAAGAAACACAAAGCCAGTGAAGAGAT...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS GCA 90 bp | TTTGATACTTTATGCCCAACTCTTCCAGCAGTGGTAACAGCACCCTaGATTTCTCAGACCAGGGAGCATAGAACATCACAAACACGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FDTLCPTLPAVVTAP*ISQTREHRTSQTRP Trigger: AGGACGTGTTTGTGATGTTCTATGCTCCCTGGTCTGAGAAATGCAGGGTGCTGTTACCACTGCTGGAAGAGTTGGGCATAAAGTATCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CCA 90 bp | TTTCACTGGCCTGTCTTGTTTGCTTGTGTCCTCTATTTTGAGCAGTaGATTCTCAGGCAACTTCTCTATGAGCTGAATCTCTGGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FHWPVLFACVLYFEQ*ILRQLLYELNLWLS Trigger: GCTGAGCCAGAGATTCAGCTCATAGAGAAGTTGCCTGAGAATCCACTGCTCAAAATAGAGGACACAAGCAAACAAGACAGGCCAGTGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCAAACAACCAAAGCTGTaGATTCAACCACATCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPKQPKL*IQPHLC Trigger: GCAAAGATGTGGTTGAATCAACAGCTTTGGTTGTTT...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCTGGTGCTTTCTTGCTAATTaGTCTTCTCAACCAAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSTQKLMSGPGTGILAPWCFLAN*SSQPNN Trigger: GTTGTTTGGTTGAGAAGACAAATTAGCAAGAAAGCA...CCAGGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCACTTCATCGCTGTTGTaGAACAAAAGTGCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPTSSLL*NKSAFL Trigger: CAAGAAAGCACTTTTGTTCAACAACAGCGATGAAGT...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | TCAAAGTTTATGTCGTCGGTGGGCATTTTGTACCTGCCGTCAGAGCTTAAGTTCTACGGCTCTGAGCTTTaGGAGATAAAGAGCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SKFMSSVGILYLPSELKFYGSEL*EIKSSM Trigger: CATGCTGCTCTTTATCTCCAAAAGCTCAGAGCCGTA...GAACTTAAGCTCTGACGGCAGGTACAAAATGCCCACCGACGACATAAACTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS TCA 90 bp | CTTTGCAATTTGTCTGTAATGCCGGCTTATGGTGCTGTACGGCTCTaGGCTTTTGGAGATAAAGAGCAGCATGTGGTTCAAGATGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCNLSVMPAYGAVRL*AFGDKEQHVVQDVQ Trigger: CTGAACATCTTGAACCACATGCTGCTCTTTATCTCCAAAAGCTCAGAGCCGTACAGCACCATAAGCCGGCATTACAGACAAATTGCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033267.4 ENSMUST00000208275.2 |
||
| CDS TCA 90 bp | AAAGCCCTTCATGGTGTGTTCTCCTTTATACATGACAGCCTCTTGTaGGTCAGTAGGGAAAAGCCTGAAGAATGGGTACTGTTCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KALHGVFSFIHDSLL*VSREKPEEWVLFWV Trigger: AACCCAGAACAGTACCCATTCTTCAGGCTTTTCCCTACTGACTCACAAGAGGCTGTCATGTATAAAGGAGAACACACCATGAAGGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 90 bp | TCCTCTATTTTGAGCAGTGGATTCTCAGGCAACTTCTCTATGAGCTaGATCTCTGGCTCAGCTAACACCTCCTCCTCTTCATTTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSILSSGFSGNFSMS*ISGSANTSSSSFCS Trigger: TGAGCAAAATGAAGAGGAGGAGGTGTTAGCTGAGCCAGAGATTCAGCTCATAGAGAAGTTGCCTGAGAATCCACTGCTCAAAATAGAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCCTGTTGCTTTATGACTaGATTGAGATGGTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPLLLYD*IEMVFV Trigger: AACAAAGACCATCTCAATCAAGTCATAAAGCAACAG...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | AGTAGATCCACTCAGAAACTGATGTCAGGACCTGGAACTGGGATCCTTGCTCCCCTGTTGCAGAACTTTTaGAGGCTTTCAAAGTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: SRSTQKLMSGPGTGILAPLLQNF*RLSKFM Trigger: CATAAACTTTGAAAGCCTCAAAAAGTTCTGCAACAG...GGGAGCAAGGATCCCAGTTCCAGGTCCTGACATCAGTTTCTGAGTGGATCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 90 bp | GTAGGGAAAAGCCTGAAGAATGGGTACTGTTCTGGGTTTGCCAGCTaGATGTCATTTGCCGTTATGTCAATCTTAGCAATGATGACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VGKSLKNGYCSGFAS*MSFAVMSILAMMTV Trigger: CACAGTCATCATTGCTAAGATTGACATAACGGCAAATGACATTCAGCTGGCAAACCCAGAACAGTACCCATTCTTCAGGCTTTTCCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS GCA 90 bp | CCTGAAGAATGGGTACTGTTCTGGGTTTGCCAGCTGAATGTCATTTaGCGTTATGTCAATCTTAGCAATGATGACTGTGGAGTGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PEEWVLFWVCQLNVI*RYVNLSNDDCGVVL Trigger: CAAAACCACTCCACAGTCATCATTGCTAAGATTGACATAACGGCAAATGACATTCAGCTGGCAAACCCAGAACAGTACCCATTCTTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CCA 90 bp | TCAATGTACAATAGCTCATCTTCTTCCTCAATCCTAACCTTGACATaGCTTTCCAGGAAGTCACAAAAGCCCTTCATGGTGTGTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SMYNSSSSSSILTLT*LSRKSQKPFMVCSP Trigger: AGGAGAACACACCATGAAGGGCTTTTGTGACTTCCTGGAAAGCCATGTCAAGGTTAGGATTGAGGAAGAAGATGAGCTATTGTACATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS-3UTR CAA 90 bp | GTTCATCCGCATTCACCAGGACGAAAAGAATTCTCAGGCCATTCATCCATCCAACTGTTGCTTTATGACTaGATTGAGATGGTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VHPHSPGRKEFSGHSSIQLLLYD*IEMVFV Trigger: AACAAAGACCATCTCAATCAAGTCATAAAGCAACAG...TTGGATGGATGAATGGCCTGAGAATTCTTTTCGTCCTGGTGAATGCGGATGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGTTTCTTGGCAGTTTTGCTGAGGAAGCTGTTGCAGAACTTTTTGAGGCTTAAAGCCTGTGAGCTGTaGCTTTATGACTTGATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LCFLAVLLRKLLQNFLRLKACEL*LYDLIE Trigger: CTCAATCAAGTCATAAAGCAACAGCTCACAGGCTTT...AAGCCTCAAAAAGTTCTGCAACAGCTTCCTCAGCAAAACTGCCAAGAAACACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGTACTCAAAGATGCGTTTGTTTTTAGGTTCATCCGCATTCACCAGGACGGAATTCCTTTGCAATTaGTCTGTAATGCCGGCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: WKYSKMRLFLGSSAFTRTEFLCN*SVMPAY Trigger: ATAAGCCGGCATTACAGACAAATTGCAAAGGAATTC...CGTCCTGGTGAATGCGGATGAACCTAAAAACAAACGCATCTTTGAGTACTTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS-3UTR CAA 90 bp | TTGTGTTTCTTGGCAGTTTTGCTGAGGAAGCTGTTGCAGAACTTTTTGAGGCTTCGATTTTTCCCTTTATaGTGTTCTGATGGCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCFLAVLLRKLLQNFLRLRFFPL*CSDGSL Trigger: CAGAGAGCCATCAGAACACAATAAAGGGAAAAATCG...AAGCCTCAAAAAGTTCTGCAACAGCTTCCTCAGCAAAACTGCCAAGAAACACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000208275.2 |
||
| CDS CAA 90 bp | CCAAAGCCCAAGCCATTCTTGCCCTTCCCGAAGATCTCTGCGGCTTaGCCCAGCTCCTTGGCCAGCTTCCTGGACTGTTTTAAGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: PKPKPFLPFPKISAA*PSSLASFLDCFKDG Trigger: CCCATCCTTAAAACAGTCCAGGAAGCTGGCCAAGGAGCTGGGCAAAGCCGCAGAGATCTTCGGGAAGGGCAAGAATGGCTTGGGCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS GCA 72 bp | AGCCATTCTTGCCCTTCCCGAAGATCTCTGCGGCTTTaGCCAGCTCCTTGGCCAGCTTCCTGGACTGTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SHSCPSRRSLRL*PAPWPASWTVL Trigger: TAAAACAGTCCAGGAAGCTGGCCAAGGAGCTGGGCAAAGCCGCAGAGATCTTCGGGAAGGGCAAGAATGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 72 bp | AAGCCATTCTTGCCCTTCCCGAAGATCTCTGCGGCTTaGCCCAGCTCCTTGGCCAGCTTCCTGGACTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: KPFLPFPKISAA*PSSLASFLDCF Trigger: AAAACAGTCCAGGAAGCTGGCCAAGGAGCTGGGCAAAGCCGCAGAGATCTTCGGGAAGGGCAAGAATGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 72 bp | TGCCCTCAAAGAACAGCTTCAATTCCGGGGCATGGGTaGTGTCAAACTCCTGCTGAAGTTCCGTCTCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CPQRTASIPGHG*CQTPAEVPSPW Trigger: CCAAGGAGACGGAACTTCAGCAGGAGTTTGACATCACCCATGCCCCGGAATTGAAGCTGTTCTTTGAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CCA 72 bp | TCTCTGCGGCTTTGCCCAGCTCCTTGGCCAGCTTCCTaGACTGTTTTAAGGATGGGTTGTGGAAAATCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SLRLCPAPWPAS*TVLRMGCGKSP Trigger: TGGTGATTTTCCACAACCCATCCTTAAAACAGTCCAGGAAGCTGGCCAAGGAGCTGGGCAAAGCCGCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 72 bp | TATGATCCTCCAGGATGTGCAAAGGCTGGGAAATGTTaGTGCCCGTGTCTATCTCTGGTGAGCCAAGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: YDPPGCAKAGKC*CPCLSLVSQGP Trigger: AGGTCCTTGGCTCACCAGAGATAGACACGGGCATCAACATTTCCCAGCCTTTGCACATCCTGGAGGATCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 72 bp | TGCGTCAAGCCTGCGGGAGTCAGCACCATTAAGTTATaGTCCTCCAGGATGTGCAAAGGCTGGGAAATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: CVKPAGVSTIKL*SSRMCKGWEML Trigger: CAACATTTCCCAGCCTTTGCACATCCTGGAGGATCATAACTTAATGGTGCTGACTCCCGCAGGCTTGACGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CCA 72 bp | CCTCTCAGCTGTTTCCTTCCTTCTCTCCGGCTCTTCTaGCTTTCTTATACTGTCCAGCACAGGAGACTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLSCFLPSLRLF*LSYTVQHRRLF Trigger: AAAGAGTCTCCTGTGCTGGACAGTATAAGAAAGCCAGAAGAGCCGGAGAGAAGGAAGGAAACAGCTGAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 72 bp | CAAACACGTCCTTTTCCTTATCAAGGACGACCACATTaGAGTTCTTCCCCACGAGCTTCTTCACTGGCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QTRPFPYQGRPH*SSSPRASSLAL Trigger: AAGGGCCAGTGAAGAAGCTCGTGGGGAAGAACTTCAATGTGGTCGTCCTTGATAAGGAAAAGGACGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS GCA 72 bp | AAAATCACCATTAGGAAGCGGGTTTCATTCAGCGTCTaGGTCAAGCCTGCGGGAGTCAGCACCATTAAGTTA | + |
|
Preference number: 6 (lower is better) Translates to: KITIRKRVSFSV*VKPAGVSTIKL Trigger: TAACTTAATGGTGCTGACTCCCGCAGGCTTGACGCAGACGCTGAATGAAACCCGCTTCCTAATGGTGATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS GCA 72 bp | TTATGCCCAACTCTTCCAGCAGTGGTAACAGCACCCTaGATTTCTCAGACCAGGGAGCATAGAACATCACAA | + |
|
Preference number: 6 (lower is better) Translates to: LCPTLPAVVTAP*ISQTREHRTSQ Trigger: TTGTGATGTTCTATGCTCCCTGGTCTGAGAAATGCAGGGTGCTGTTACCACTGCTGGAAGAGTTGGGCATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CCA 72 bp | GTCAGTAGGGAAAAGCCTGAAGAATGGGTACTGTTCTaGGTTTGCCAGCTGAATGTCATTTGCCGTTATGTC | + |
|
Preference number: 6 (lower is better) Translates to: VSREKPEEWVLF*VCQLNVICRYV Trigger: GACATAACGGCAAATGACATTCAGCTGGCAAACCCAGAACAGTACCCATTCTTCAGGCTTTTCCCTACTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 72 bp | TCCTTGGCCAGCTTCCTGGACTGTTTTAAGGATGGGTaGTGGAAAATCACCATTAGGAAGCGGGTTTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: SLASFLDCFKDG*WKITIRKRVSF Trigger: GAATGAAACCCGCTTCCTAATGGTGATTTTCCACAACCCATCCTTAAAACAGTCCAGGAAGCTGGCCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 72 bp | CATGGTGTGTTCTCCTTTATACATGACAGCCTCTTGTaGGTCAGTAGGGAAAAGCCTGAAGAATGGGTACTG | + |
|
Preference number: 6 (lower is better) Translates to: HGVFSFIHDSLL*VSREKPEEWVL Trigger: CAGTACCCATTCTTCAGGCTTTTCCCTACTGACTCACAAGAGGCTGTCATGTATAAAGGAGAACACACCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 72 bp | TTCACTGGCCTGTCTTGTTTGCTTGTGTCCTCTATTTaGAGCAGTGGATTCTCAGGCAACTTCTCTATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FTGLSCLLVSSI*SSGFSGNFSMS Trigger: GCTCATAGAGAAGTTGCCTGAGAATCCACTGCTCAAAATAGAGGACACAAGCAAACAAGACAGGCCAGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 72 bp | AGCCTGAAGAATGGGTACTGTTCTGGGTTTGCCAGCTaGATGTCATTTGCCGTTATGTCAATCTTAGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SLKNGYCSGFAS*MSFAVMSILAM Trigger: CATTGCTAAGATTGACATAACGGCAAATGACATTCAGCTGGCAAACCCAGAACAGTACCCATTCTTCAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS GCA 72 bp | AGGGAAAAGCCTGAAGAATGGGTACTGTTCTGGGTTTaGCAGCTGAATGTCATTTGCCGTTATGTCAATCTT | + |
|
Preference number: 6 (lower is better) Translates to: REKPEEWVLFWV*QLNVICRYVNL Trigger: AAGATTGACATAACGGCAAATGACATTCAGCTGGCAAACCCAGAACAGTACCCATTCTTCAGGCTTTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CCA 72 bp | AATAGCTCATCTTCTTCCTCAATCCTAACCTTGACATaGCTTTCCAGGAAGTCACAAAAGCCCTTCATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: NSSSSSSILTLT*LSRKSQKPFMV Trigger: CACCATGAAGGGCTTTTGTGACTTCCTGGAAAGCCATGTCAAGGTTAGGATTGAGGAAGAAGATGAGCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CCA 72 bp | CTTTCTTATACTGTCCAGCACAGGAGACTCTTTCACTaGCCTGTCTTGTTTGCTTGTGTCCTCTATTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSYTVQHRRLFH*PVLFACVLYFE Trigger: CTCAAAATAGAGGACACAAGCAAACAAGACAGGCCAGTGAAAGAGTCTCCTGTGCTGGACAGTATAAGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS GCA 72 bp | CACCAGGACGAAAAGAATCTTGTTCTGGAATTCCTTTaGAATTTGTCTGTAATGCCGGCTTATGGTGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: HQDEKNLVLEFL*NLSVMPAYGAV Trigger: TACAGCACCATAAGCCGGCATTACAGACAAATTGCAAAGGAATTCCAGAACAAGATTCTTTTCGTCCTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 72 bp | ATGTACAATAGCTCATCTTCTTCCTCAATCCTAACCTaGACATGGCTTTCCAGGAAGTCACAAAAGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: MYNSSSSSSILT*TWLSRKSQKPF Trigger: GAAGGGCTTTTGTGACTTCCTGGAAAGCCATGTCAAGGTTAGGATTGAGGAAGAAGATGAGCTATTGTACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 90 bp | ACCAAGGGCCTGGATTTCACAAAATCGGCCACTTCATCGCTGTTGTaGAACAAAAGTGCTTTCTTGCTAATTTGTCTTCTCAACCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: TKGLDFTKSATSSLL*NKSAFLLICLLNQT Trigger: TGTTTGGTTGAGAAGACAAATTAGCAAGAAAGCACTTTTGTTCAACAACAGCGATGAAGTGGCCGATTTTGTGAAATCCAGGCCCTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 90 bp | ATGACCAAGGGCCTGGATTTCACAAAATCGGCCACTTCATCGCTGTaGTTGAACAAAAGTGCTTTCTTGCTAATTTGTCTTCTCAACCAA | + |
|
Preference number: 6 (lower is better) Translates to: MTKGLDFTKSATSSL*LNKSAFLLICLLNQ Trigger: TTGGTTGAGAAGACAAATTAGCAAGAAAGCACTTTTGTTCAACAACAGCGATGAAGTGGCCGATTTTGTGAAATCCAGGCCCTTGGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 90 bp | TTTTGCTCAATGTACAATAGCTCATCTTCTTCCTCAATCCTAACCTaGACATGGCTTTCCAGGAAGTCACAAAAGCCCTTCATGGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: FCSMYNSSSSSSILT*TWLSRKSQKPFMVC Trigger: ACACACCATGAAGGGCTTTTGTGACTTCCTGGAAAGCCATGTCAAGGTTAGGATTGAGGAAGAAGATGAGCTATTGTACATTGAGCAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS TCA 72 bp | TTTGTATCGCTCCAAACGTTAGTTCTGGGAAGTCCTTaGTGGTGTCATAGAATAATTCTGCCACTTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FVSLQTLVLGSP*WCHRIILPLLP Trigger: AGGAAGAAGTGGCAGAATTATTCTATGACACCATCAAGGACTTCCCAGAACTAACGTTTGGAGCGATACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 72 bp | GGCCTGGATTTCACAAAATCGGCCACTTCATCGCTGTaGTTGAACAAAAGTGCTTTCTTGCTAATTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: GLDFTKSATSSL*LNKSAFLLICL Trigger: AAGACAAATTAGCAAGAAAGCACTTTTGTTCAACAACAGCGATGAAGTGGCCGATTTTGTGAAATCCAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 72 bp | GCCACTTCATCGCTGTTGTTGAACAAAAGTGCTTTCTaGCTAATTTGTCTTCTCAACCAAACAACCAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ATSSLLLNKSAF*LICLLNQTTKA Trigger: AGCTTTGGTTGTTTGGTTGAGAAGACAAATTAGCAAGAAAGCACTTTTGTTCAACAACAGCGATGAAGTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 72 bp | CTGGATTTCACAAAATCGGCCACTTCATCGCTGTTGTaGAACAAAAGTGCTTTCTTGCTAATTTGTCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LDFTKSATSSLL*NKSAFLLICLL Trigger: GAGAAGACAAATTAGCAAGAAAGCACTTTTGTTCAACAACAGCGATGAAGTGGCCGATTTTGTGAAATCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 90 bp | ACAAAATCGGCCACTTCATCGCTGTTGTTGAACAAAAGTGCTTTCTaGCTAATTTGTCTTCTCAACCAAACAACCAAAGCTGTTGATTCA | + |
|
Preference number: 6 (lower is better) Translates to: TKSATSSLLLNKSAF*LICLLNQTTKAVDS Trigger: TGAATCAACAGCTTTGGTTGTTTGGTTGAGAAGACAAATTAGCAAGAAAGCACTTTTGTTCAACAACAGCGATGAAGTGGCCGATTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033267.4 |
||
| CDS CAA 72 bp | CTCAATCACAAAGCCTGTGAGCTGTTGCTTTATGACTaGATTGAGATGGTCTTTGTTTGTACTGTCATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: LNHKACELLLYD*IEMVFVCTVIN Trigger: ATTAATGACAGTACAAACAAAGACCATCTCAATCAAGTCATAAAGCAACAGCTCACAGGCTTTGTGATTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033267.4 ENSMUST00000208275.2 |
||
| CDS TCA 72 bp | TCAATCACAAAGCCTGTGAGCTGTTGCTTTATGACTTaGTTGAGATGGTCTTTGTTTGTACTGTCATTAATA | + |
|
Preference number: 6 (lower is better) Translates to: SITKPVSCCFMT*LRWSLFVLSLI Trigger: TATTAATGACAGTACAAACAAAGACCATCTCAATCAAGTCATAAAGCAACAGCTCACAGGCTTTGTGATTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033267.4 ENSMUST00000208275.2 |
||