Pregenerated sensors for PDIK1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050890Ensembl transcript IDs: ENSMUST00000061234.14, ENSMUST00000105876.9, ENSMUST00000105877.9, ENSMUST00000127857.2, ENSMUST00000145006.8
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATaGTCAAGTGCCCGCATGGCCCAGTGCAGTGGTTTAATTACTCAA | + |
|
Preference number: 1 (lower is better) Translates to: AMFSEQKNTSSGYSR*SSARMAQCSGLITQ Trigger: TTGAGTAATTAAACCACTGCACTGGGCCATGCGGGCACTTGAGCATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR CCA 90 bp | AATGGTAGAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATaGTTGTCGTATCAACTAAACTTAAGTGCTGAGCACACAGTAGGT | + |
|
Preference number: 1 (lower is better) Translates to: NGRILSPAPTTANLK*LSYQLNLSAEHTVG Trigger: ACCTACTGTGTGCTCAGCACTTAAGTTTAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTCTACCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCGCCCGCATGGCCCAGTaGAGTGGTTTAATTACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: GPRFYPSTGGGQLVPYKAARMAQ*SGLITQ Trigger: TTGAGTAATTAAACCACTGCACTGGGCCATGCGGGC...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCGTTCATCAGCCATTCTaGCCCTCCAAAATGATGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GPRFYPSTGGGQLVPYKAVHQPF*PSKMMP Trigger: AGGCATCATTTTGGAGGGTCAGAATGGCTGATGAAC...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCTGGGACTTTCTTCTCTaGTTGGCTCCTAAGAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: GPRFYPSTGGGQLVPYKAWDFLL*LAPKRI Trigger: AATTCTCTTAGGAGCCAAGCAGAGAAGAAAGTCCCA...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCATGTGGAATGCAAAATaGACACATTCACATACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: GPRFYPSTGGGQLVPYKAMWNAK*THSHTD Trigger: GTCAGTATGTGAATGTGTGCATTTTGCATTCCACAT...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTGGCGGTTCAAGCACTaGGGGGACAAGGAGAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: ESSLQPLQLQILNGCRINWRFKH*GDKESC Trigger: GCAACTCTCCTTGTCCCCTCAGTGCTTGAACCGCCA...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACAAGAGCTACAGGCCCTaGAGAGCTCTAACGCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: ESSLQPLQLQILNGCRINKSYRP*RALTHP Trigger: AGGGTGCGTTAGAGCTCTGCAGGGCCTGTAGCTCTT...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCACGGGTCAGATCTGTGTCAACTTGGTGACCCACAGGGTCAATTACCATGAAATGACTGATTCAACTTaGAAGAGCTACAGGCCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: STGQICVNLVTHRVNYHEMTDST*KSYRPC Trigger: GCAGGGCCTGTAGCTCTTCCAAGTTGAATCAGTCAT...TTCATGGTAATTGACCCTGTGGGTCACCAAGTTGACACAGATCTGACCCGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTCTGTGTCAACTTGGTaGCCCACAGGGTCAATTACC | + |
|
Preference number: 2 (lower is better) Translates to: ESSLQPLQLQILNGCRINSVSTW*PTGSIT Trigger: GGTAATTGACCCTGTGGGTCACCAAGTTGACACAGA...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTCCAGCAACTCCAGGGTaGGCTCATTTGGTTTCTTCG | + |
|
Preference number: 2 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFPATPG*AHLVSS Trigger: CGAAGAAACCAAATGAGCTCACCCTGGAGTTGCTGG...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATTGGCGGTTCAAGCACTaGGGGGACAAGGAGAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNWRFKH*GDKESC Trigger: GCAACTCTCCTTGTCCCCTCAGTGCTTGAACCGCCA...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTCTGTGTCAACTTGGTaGCCCACAGGGTCAATTACC | + |
|
Preference number: 2 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCSVSTW*PTGSIT Trigger: GGTAATTGACCCTGTGGGTCACCAAGTTGACACAGA...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTGTACAACCCTACAGTaGCTGGACACAGCTGCCTAT | + |
|
Preference number: 2 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCCTTLQ*LDTAAY Trigger: ATAGGCAGCTGTGTCCAGTCACTGTAGGGTTGTACA...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAACAGCATCACTGTCAAAGTGACAGAGACTCCAGTGATCCAACAGGAAGCTGGGACTTTCTTCTCTaGTTGGCTCCTAAGAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: RKQHHCQSDRDSSDPTGSWDFLL*LAPKRI Trigger: AATTCTCTTAGGAGCCAAGCAGAGAAGAAAGTCCCA...GCTTCCTGTTGGATCACTGGAGTCTCTGTCACTTTGACAGTGATGCTGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTGCCCGCATGGCCCAGTaGAGTGGTTTAATTACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFARMAQ*SGLITQ Trigger: TTGAGTAATTAAACCACTGCACTGGGCCATGCGGGC...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR CAA 90 bp | GGTAGAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTaGTCGTATCAACTAAACTTAAGTGCTGAGCACACAGTAGGTACT | + |
|
Preference number: 2 (lower is better) Translates to: GRILSPAPTTANLKW*SYQLNLSAEHTVGT Trigger: AGTACCTACTGTGTGCTCAGCACTTAAGTTTAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTCTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTGTTCATCAGCCATTCTaGCCCTCCAAAATGATGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFVHQPF*PSKMMP Trigger: AGGCATCATTTTGGAGGGTCAGAATGGCTGATGAAC...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATAAGAGCTACAGGCCCTaGAGAGCTCTAACGCACCCT | + |
|
Preference number: 2 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNKSYRP*RALTHP Trigger: AGGGTGCGTTAGAGCTCTGCAGGGCCTGTAGCTCTT...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTGGATCAAAAGCTATGTaGTCAGGACACCACAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFGSKAM*SGHHSF Trigger: GAAGCTGTGGTGTCCTGAGCACATAGCTTTTGATCC...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTATGCGCAAGTGCACATaGAAGCAAGAGGGTATTAGG | + |
|
Preference number: 2 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCMRKCT*KQEGIR Trigger: CCTAATACCCTCTTGCTTCCATGTGCACTTGCGCAT...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGTCTGTGTCAACTTGGTaGCCCACAGGGTCAATTACC | + |
|
Preference number: 2 (lower is better) Translates to: QRQIPVLLLISQAISEDKSVSTW*PTGSIT Trigger: GGTAATTGACCCTGTGGGTCACCAAGTTGACACAGA...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTCCCTGTCCTTTTGTTaGTATCACAAGCTATTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: ESSLQPLQLQILNGCRINSLSFC*YHKLFQ Trigger: CTGAAATAGCTTGTGATATCAACAAAAGGACAGGGA...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGGCCCGCATGGCCCAGTaGAGTGGTTTAATTACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: QRQIPVLLLISQAISEDKARMAQ*SGLITQ Trigger: TTGAGTAATTAAACCACTGCACTGGGCCATGCGGGC...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTAACGCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATCATGGCCCAGTGCAGTaGTTTAATTACTCAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: CVTQCFQNRRTRPRVTADHGPVQ*FNYSNK Trigger: TTTGTTTGAGTAATTAAACCACTGCACTGGGCCATG...ATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGCGTTACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACCATGGCCCAGTGCAGTaGTTTAATTACTCAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: ESSLQPLQLQILNGCRINHGPVQ*FNYSNK Trigger: TTTGTTTGAGTAATTAAACCACTGCACTGGGCCATG...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR CAA 90 bp | ATGTTTCCAGTAGCAGAAGGAGTAGGGACGAAGATGAGGGATGGTTaGTGTGGTTTTTATCACCAATTTCATCAGCAAATCTCAAAAACC | + |
|
Preference number: 2 (lower is better) Translates to: MFPVAEGVGTKMRDG*CGFYHQFHQQISKT Trigger: GGTTTTTGAGATTTGCTGATGAAATTGGTGATAAAAACCACACAAACCATCCCTCATCTTCGTCCCTACTCCTTCTGCTACTGGAAACAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTAGACAACTTTTCTACTTaGAAAGCAGTTGAGGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: ILSPAPTTANLKWLSYQLDNFST*KAVEGI Trigger: TATGCCCTCAACTGCTTTTCAAGTAGAAAAGTTGTC...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTGATCTGTTGATTTTGTaGTGGCAGGGATTGAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFDLLIL*WQGLNP Trigger: TGGATTCAATCCCTGCCATCACAAAATCAACAGATC...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | AGCTTCAGTTATCGTTCATCAGCCATTCTGACCCTCCAAAATGATGCCTTTAAATGGGACTTTCTTCTCTaGTTGGCTCCTAAGAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: SFSYRSSAILTLQNDAFKWDFLL*LAPKRI Trigger: AATTCTCTTAGGAGCCAAGCAGAGAAGAAAGTCCCA...TTTAAAGGCATCATTTTGGAGGGTCAGAATGGCTGATGAACGATAACTGAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACATGTGGAATGCAAAATaGACACATTCACATACTGAC | + |
|
Preference number: 2 (lower is better) Translates to: ESSLQPLQLQILNGCRINMWNAK*THSHTD Trigger: GTCAGTATGTGAATGTGTGCATTTTGCATTCCACAT...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTAACGCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATGAGGGATGGTTTGTGTaGTTTTTATCACCAATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: CVTQCFQNRRTRPRVTADEGWFV*FLSPIS Trigger: TGAAATTGGTGATAAAAACCACACAAACCATCCCTC...ATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGCGTTACACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTATAAATACCCCTGACTaGACGAACAAAGACAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFINTPD*TNKDKS Trigger: GGATTTGTCTTTGTTCGTTCAGTCAGGGGTATTTAT...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTGGGATAACTGTTTATTaGGTACCTATTATGGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCGITVY*VPIMGK Trigger: CTTGCCCATAATAGGTACTCAATAAACAGTTATCCC...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTGGGATAACTGTTTATTaGGTACCTATTATGGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFGITVY*VPIMGK Trigger: CTTGCCCATAATAGGTACTCAATAAACAGTTATCCC...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTTTCTTCATGTGGAATaGAAAATGCACACATTCACA | + |
|
Preference number: 2 (lower is better) Translates to: ESSLQPLQLQILNGCRINFLHVE*KMHTFT Trigger: TGTGAATGTGTGCATTTTGCATTCCACATGAAGAAA...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTAACGCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATTTTCTTCATGTGGAATaGAAAATGCACACATTCACA | + |
|
Preference number: 2 (lower is better) Translates to: CVTQCFQNRRTRPRVTADFLHVE*KMHTFT Trigger: TGTGAATGTGTGCATTTTGCATTCCACATGAAGAAA...ATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGCGTTACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACAGAATTTTATCCATTTaGATCGTCTCTCACTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ESSLQPLQLQILNGCRINRILSI*IVSHFG Trigger: TCCAAAGTGAGAGACGATGCAAATGGATAAAATTCT...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATGGATCAAAAGCTATGTaGTCAGGACACCACAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNGSKAM*SGHHSF Trigger: GAAGCTGTGGTGTCCTGAGCACATAGCTTTTGATCC...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACGATATTTCTAGAAAATaGGACTTTCTTCTCTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ESSLQPLQLQILNGCRINDISRK*DFLLCL Trigger: CAAGCAGAGAAGAAAGTCCCATTTTCTAGAAATATC...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGCTTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATGATATTTCTAGAAAATaGGACTTTCTTCTCTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: TKLRRLHYQHANLFFHGNDISRK*DFLLCL Trigger: CAAGCAGAGAAGAAAGTCCCATTTTCTAGAAATATC...ATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAAGCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTCATGGCCCAGTGCAGTaGTTTAATTACTCAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFHGPVQ*FNYSNK Trigger: TTTGTTTGAGTAATTAAACCACTGCACTGGGCCATG...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTATCCTGATAGTCTATTaGCTTTTGCATCTTAACGCT | + |
|
Preference number: 2 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFILIVY*LLHLNA Trigger: AGCGTTAAGATGCAAAAGGCAATAGACTATCAGGAT...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTGATATTTCTAGAAAATaGGACTTTCTTCTCTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCDISRK*DFLLCL Trigger: CAAGCAGAGAAGAAAGTCCCATTTTCTAGAAATATC...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR TCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATGACAACTTTTCTACTTaGAAAGCAGTTGAGGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNDNFST*KAVEGI Trigger: TATGCCCTCAACTGCTTTTCAAGTAGAAAAGTTGTC...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGAAACCTCTTCTTCCATaGAAATGCCTAATACTGACA | + |
|
Preference number: 2 (lower is better) Translates to: QRQIPVLLLISQAISEDKKPLLP*KCLILT Trigger: TGTCAGTATTAGGCATTTCCATGGAAGAAGAGGTTT...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGGAGGGATGGTTTGTGTaGTTTTTATCACCAATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: QRQIPVLLLISQAISEDKEGWFV*FLSPIS Trigger: TGAAATTGGTGATAAAAACCACACAAACCATCCCTC...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGTTTCTTCATGTGGAATaGAAAATGCACACATTCACA | + |
|
Preference number: 2 (lower is better) Translates to: QRQIPVLLLISQAISEDKFLHVE*KMHTFT Trigger: TGTGAATGTGTGCATTTTGCATTCCACATGAAGAAA...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGAGAATTTTATCCATTTaGATCGTCTCTCACTTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: QRQIPVLLLISQAISEDKRILSI*IVSHFG Trigger: TCCAAAGTGAGAGACGATGCAAATGGATAAAATTCT...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR GCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATATCCTGATAGTCTATTaGCTTTTGCATCTTAACGCT | + |
|
Preference number: 2 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNILIVY*LLHLNA Trigger: AGCGTTAAGATGCAAAAGGCAATAGACTATCAGGAT...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATAAACCTCTTCTTCCATaGAAATGCCTAATACTGACA | + |
|
Preference number: 2 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNKPLLP*KCLILT Trigger: TGTCAGTATTAGGCATTTCCATGGAAGAAGAGGTTT...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCCTTTCCCTTCAGGAGTaGAGTCTCTTGCTTTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GPRFYPSTGGGQLVPYKALSLQE*SLLLSD Trigger: GTCAGAAAGCAAGAGACTCAACTCCTGAAGGGAAAG...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR TCA 72 bp | CAAGCGCTCTTCACTGAACCACAGCCAGACCTAATGTaGCGGTATGGCGGTTCAAGCACTGAGGGGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QALFTEPQPDLM*RYGGSSTEGTR Trigger: CCTTGTCCCCTCAGTGCTTGAACCGCCATACCGTCACATTAGGTCTGGCTGTGGTTCAGTGAAGAGCGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR GCA 72 bp | TCCATGACTGATTCAACTTGGAAGAGCTACAGGCCCTaGAGAGCTCTAACGCACCCTGCGGCTTACACCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SMTDSTWKSYRP*RALTHPAAYTC Trigger: GCAGGTGTAAGCCGCAGGGTGCGTTAGAGCTCTGCAGGGCCTGTAGCTCTTCCAAGTTGAATCAGTCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR GCA 72 bp | TCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATaGTCAAGTGCCCGCATGGCCCAGTGCAGTGGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SEQKNTSSGYSR*SSARMAQCSGL Trigger: TAAACCACTGCACTGGGCCATGCGGGCACTTGAGCATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR GCA 72 bp | GAAGAACACGTCCTCGGGTTACAGCAGATGCTCAAGTaGCCGCATGGCCCAGTGCAGTGGTTTAATTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: EEHVLGLQQMLK*PHGPVQWFNYS Trigger: TGAGTAATTAAACCACTGCACTGGGCCATGCGGGCACTTGAGCATCTGCTGTAACCCGAGGACGTGTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR GCA 72 bp | GGTTACAGCAGATGCTCAAGTGCCCGCATGGCCCAGTaGAGTGGTTTAATTACTCAAACAAATGCTCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GYSRCSSARMAQ*SGLITQTNAQP Trigger: TGGCTGAGCATTTGTTTGAGTAATTAAACCACTGCACTGGGCCATGCGGGCACTTGAGCATCTGCTGTAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTATCAGTGCTAACACCTTaGTGTAGCACAAGCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ILSPAPTTANLKWLSYQLSVLTP*CSTSKA Trigger: GGCCTTGCTTGTGCTACACAAAGGTGTTAGCACTGA...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTAACAAAGCTTCGAAGGTaGCATTACCAGCACGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ILSPAPTTANLKWLSYQLTKLRR*HYQHAN Trigger: GTTTGCGTGCTGGTAATGCAACCTTCGAAGCTTTGT...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR GCA 72 bp | CTCATTATTTTCAAGGAGGCAGGATCAAAAGCTATGTaGTCAGGACACCACAGCTTCAAGTGCACAGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: LIIFKEAGSKAM*SGHHSFKCTGI Trigger: AATACCTGTGCACTTGAAGCTGTGGTGTCCTGAGCACATAGCTTTTGATCCTGCCTCCTTGAAAATAATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR CCA 72 bp | TCCAGTAGCAGAAGGAGTAGGGACGAAGATGAGGGATaGTTTGTGTGGTTTTTATCACCAATTTCATCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSSRRSRDEDEG*FVWFLSPISSA Trigger: TGCTGATGAAATTGGTGATAAAAACCACACAAACCATCCCTCATCTTCGTCCCTACTCCTTCTGCTACTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR TCA 72 bp | CTGTGTCAACTTGGTGACCCACAGGGTCAATTACCATaGAGATCCAGGACATTTCTACCTCTTATTTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCQLGDPQGQLP*RSRTFLPLISE Trigger: TTCAGAAATAAGAGGTAGAAATGTCCTGGATCTTCATGGTAATTGACCCTGTGGGTCACCAAGTTGACACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR CCA 72 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATaGTTGTCGTATCAACTAAACTTAAGTGCTGAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: ILSPAPTTANLK*LSYQLNLSAEH Trigger: GTGCTCAGCACTTAAGTTTAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CAA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACGACTTTCTTCTCTGCTaGGCTCCTAAGAGAATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ESSLQPLQLQILNGCRINDFLLC*APKRIF Trigger: AAAAATTCTCTTAGGAGCCAAGCAGAGAAGAAAGTC...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATGCATCGTCTCTCACTTaGGAAGAGAGCGACCAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNASSLT*EESDQY Trigger: ATACTGGTCGCTCTCTTCCAAAGTGAGAGACGATGC...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATCAGGAGTTGAGTCTCTaGCTTTCTGACAGATGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNQELSL*LSDRCQ Trigger: CTGGCATCTGTCAGAAAGCAAGAGACTCAACTCCTG...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATTCAGTGCTAACACCTTaGTGTAGCACAAGCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNSVLTP*CSTSKA Trigger: GGCCTTGCTTGTGCTACACAAAGGTGTTAGCACTGA...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTGACTTTCTTCTCTGCTaGGCTCCTAAGAGAATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCDFLLC*APKRIF Trigger: AAAAATTCTCTTAGGAGCCAAGCAGAGAAGAAAGTC...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR GCA 72 bp | TATACATATATGTTTCCTTTACAAAGCTTCGAAGGTTaGATTACCAGCACGCAAACCTCTTCTTCCATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: YTYMFPLQSFEG*ITSTQTSSSME Trigger: TTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAAGCTTTGTAAAGGAAACATATATGTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCTGGGTTCCAAGTCACTaGTGTCCATCCTGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRFYPSTGGGQLVPYKAWVPSH*CPSCSG Trigger: CCCAGAGCAGGATGGACACCAGTGACTTGGAACCCA...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCCGAAATCAGCCACTTTaGGTGTGGGTTCCAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GPRFYPSTGGGQLVPYKARNQPL*VWVPSH Trigger: GTGACTTGGAACCCACACTCAAAGTGGCTGATTTCG...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCATGCACTCTTCCAAGTaGATCACATTTGGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRFYPSTGGGQLVPYKAMHSSK*ITFGCW Trigger: CCAACACCCAAATGTGATTCACTTGGAAGAGTGCAT...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR CAA 72 bp | GGAGGCAACCATGCAGTTAGACTTTCCCTTCAGGAGTaGAGTCTCTTGCTTTCTGACAGATGCCAGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GGNHAVRLSLQE*SLLLSDRCQVT Trigger: GGTCACCTGGCATCTGTCAGAAAGCAAGAGACTCAACTCCTGAAGGGAAAGTCTAACTGCATGGTTGCCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | TCCACGGGTCAGATCTGTGTCAACTTGGTGACCCACAGGGTCAATTACCATGAATCCTGCTCTGGGAAATaGGGATGTTATCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STGQICVNLVTHRVNYHESCSGK*GCYQAS Trigger: TGAAGCCTGATAACATCCTCATTTCCCAGAGCAGGA...TTCATGGTAATTGACCCTGTGGGTCACCAAGTTGACACAGATCTGACCCGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR GCA 90 bp | TCCACGGGTCAGATCTGTGTCAACTTGGTGACCCACAGGGTCAATTACCATGAAGATCCTCTCCAGCATTaGCCAGATGATAATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STGQICVNLVTHRVNYHEDPLQH*PDDNSQ Trigger: CTGGGAATTATCATCTGGGCAATGCTGGAGAGGATC...TTCATGGTAATTGACCCTGTGGGTCACCAAGTTGACACAGATCTGACCCGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTATGGGTTCCAAGTCACTaGTGTCCATCCTGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ILSPAPTTANLKWLSYQLWVPSH*CPSCSG Trigger: CCCAGAGCAGGATGGACACCAGTGACTTGGAACCCA...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | AGCAACTCCAGGGTGAGCTCATTTGGTTTCTTCGACTTTATGCTGAGATTTAGATGGGTTCCAAGTCACTaGTGTCCATCCTGCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSRVSSFGFFDFMLRFRWVPSH*CPSCSG Trigger: CCCAGAGCAGGATGGACACCAGTGACTTGGAACCCA...TCTAAATCTCAGCATAAAGTCGAAGAAACCAAATGAGCTCACCCTGGAGTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTAACGCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATTTGGGTGTTGGCTCTTaGTACTGCTTAGTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVTQCFQNRRTRPRVTADLGVGS*YCLVPR Trigger: TCTGGGCACTAAGCAGTATCAAGAGCCAACACCCAA...ATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGCGTTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | AGAAAACAGCATCACTGTCAAAGTGACAGAGACTCCAGTGATCCAACAGGAAGCTCCTGCTCTGGGAAATaGGGATGTTATCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQHHCQSDRDSSDPTGSSCSGK*GCYQAS Trigger: TGAAGCCTGATAACATCCTCATTTCCCAGAGCAGGA...GCTTCCTGTTGGATCACTGGAGTCTCTGTCACTTTGACAGTGATGCTGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTTGTCCTGCTCTGTGCTaGTTCCCGGTTACTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFCPALC*FPVTRH Trigger: GTGCCTAGTAACCGGGAATCAGCACAGAGCAGGACA...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS-3UTR GCA 90 bp | TCCACGGGTCAGATCTGTGTCAACTTGGTGACCCACAGGGTCAATTACCATGAAGGTCTTTCTGATGACTaGTTCATACACAACACCGTA | + |
|
Preference number: 4 (lower is better) Translates to: STGQICVNLVTHRVNYHEGLSDD*FIHNTV Trigger: TACGGTGTTGTGTATGAAGCAGTCATCAGAAAGACC...TTCATGGTAATTGACCCTGTGGGTCACCAAGTTGACACAGATCTGACCCGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAACAGCATCACTGTCAAAGTGACAGAGACTCCAGTGATCCAACAGGAAGCGGCTTCAGGTCTCGGTaGATTATCTGGTTTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKQHHCQSDRDSSDPTGSGFRSR*IIWFLC Trigger: GCACAAAAACCAGATAATCCACCGAGACCTGAAGCC...GCTTCCTGTTGGATCACTGGAGTCTCTGTCACTTTGACAGTGATGCTGTTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| 3UTR CAA 72 bp | CTTGTAACTCAATCCACGGGTCAGATCTGTGTCAACTaGGTGACCCACAGGGTCAATTACCATGAAGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVTQSTGQICVN*VTHRVNYHEDP Trigger: TGGATCTTCATGGTAATTGACCCTGTGGGTCACCAAGTTGACACAGATCTGACCCGTGGATTGAGTTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTCTAGGCACTTCCAAGTaGCTCTTTTCTCTGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCLGTSK*LFSLQR Trigger: CCGCTGCAGAGAAAAGAGTCACTTGGAAGTGCCTAG...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | TTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATGCCTAATGGCTTCAGGTCTCGGTaGATTATCTGGTTTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FEGCITSTQTSSSMEMPNGFRSR*IIWFLC Trigger: GCACAAAAACCAGATAATCCACCGAGACCTGAAGCC...ATTAGGCATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTACCGTCCCGCATGCCGTaGAAAGGAAACACTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ILSPAPTTANLKWLSYQLPSRMP*KGNTCL Trigger: TAAACAAGTGTTTCCTTTCCACGGCATGCGGGACGG...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAGTTATCGTTCATCAGCCATTCTGACCCTCCAAAATGATGCCTTTAAATTGGGTGTTGGCTCTTaGTACTGCTTAGTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFSYRSSAILTLQNDAFKLGVGS*YCLVPR Trigger: TCTGGGCACTAAGCAGTATCAAGAGCCAACACCCAA...TTTAAAGGCATCATTTTGGAGGGTCAGAATGGCTGATGAACGATAACTGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTAACGCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATATGCACTCTTCCAAGTaGATCACATTTGGGTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CVTQCFQNRRTRPRVTADMHSSK*ITFGCW Trigger: CCAACACCCAAATGTGATTCACTTGGAAGAGTGCAT...ATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGCGTTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | TTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATGCCTAATGAAGAATTAGAGCCGTaGGACATCTTTTGCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: FEGCITSTQTSSSMEMPNEELEP*DIFCTI Trigger: GATGGTGCAAAAGATGTCCCACGGCTCTAATTCTTC...ATTAGGCATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAACAGCATCACTGTCAAAGTGACAGAGACTCCAGTGATCCAACAGGAAGCTTCGATTGGGTTTCCTaGACAACAGGTACTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKQHHCQSDRDSSDPTGSFDWVS*TTGTHS Trigger: TGAATGAGTACCTGTTGTCCAGGAAACCCAATCGAA...GCTTCCTGTTGGATCACTGGAGTCTCTGTCACTTTGACAGTGATGCTGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTCTCGGTGGATTATCTaGTTTTTGTGCAAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESSLQPLQLQILNGCRINSRWII*FLCKKA Trigger: GGCCTTCTTGCACAAAAACCAGATAATCCACCGAGA...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCTTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATTCTCGGTGGATTATCTaGTTTTTGTGCAAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKLRRLHYQHANLFFHGNSRWII*FLCKKA Trigger: GGCCTTCTTGCACAAAAACCAGATAATCCACCGAGA...ATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAAGCTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTAGGCTTCAGGTCTCGGTaGATTATCTGGTTTTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILSPAPTTANLKWLSYQLGFRSR*IIWFLC Trigger: GCACAAAAACCAGATAATCCACCGAGACCTGAAGCC...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | TTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATGCCTAATGTGTCCATCCTGCTCTaGGAAATGAGGATGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: FEGCITSTQTSSSMEMPNVSILL*EMRMLS Trigger: TGATAACATCCTCATTTCCCAGAGCAGGATGGACAC...ATTAGGCATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTCCGTCCCGCATGCCGTaGAAAGGAAACACTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFPSRMP*KGNTCL Trigger: TAAACAAGTGTTTCCTTTCCACGGCATGCGGGACGG...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | TGTGTAACGCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATAGATCGTACTTTGGCTaGCTACTCACCATCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CVTQCFQNRRTRPRVTADRSYFG*LLTIFK Trigger: CTTGAAGATGGTGAGTAGCCAGCCAAAGTACGATCT...ATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGCGTTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | TGTGTAACGCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATAACACTTGTTTACACTaGCAGGTTCTTCTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVTQCFQNRRTRPRVTADNTCLH*QVLLGS Trigger: AGAACCCAGAAGAACCTGTCAGTGTAAACAAGTGTT...ATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGCGTTACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | ACAAAGCTTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATAACACTTGTTTACACTaGCAGGTTCTTCTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKLRRLHYQHANLFFHGNNTCLH*QVLLGS Trigger: AGAACCCAGAAGAACCTGTCAGTGTAAACAAGTGTT...ATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAAGCTTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR GCA 90 bp | TTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATGCCTAATGGTCTTTCTGATGACTaGTTCATACACAACACCGTA | + |
|
Preference number: 4 (lower is better) Translates to: FEGCITSTQTSSSMEMPNGLSDD*FIHNTV Trigger: TACGGTGTTGTGTATGAAGCAGTCATCAGAAAGACC...ATTAGGCATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR GCA 90 bp | AGCTTCAGTTATCGTTCATCAGCCATTCTGACCCTCCAAAATGATGCCTTTAAAGATCCTCTCCAGCATTaGCCAGATGATAATTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFSYRSSAILTLQNDAFKDPLQH*PDDNSQ Trigger: CTGGGAATTATCATCTGGGCAATGCTGGAGAGGATC...TTTAAAGGCATCATTTTGGAGGGTCAGAATGGCTGATGAACGATAACTGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTAACATTTTCAGGCGCGTaGCATCGAATTTTCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: ILSPAPTTANLKWLSYQLTFSGA*HRIFFT Trigger: CGTGAAGAAAATTCGATGCCACGCGCCTGAAAATGT...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAACAGCATCACTGTCAAAGTGACAGAGACTCCAGTGATCCAACAGGAAGCATCACATTTGGGTGTTaGCTCTTGATACTGCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKQHHCQSDRDSSDPTGSITFGC*LLILLS Trigger: ACTAAGCAGTATCAAGAGCCAACACCCAAATGTGAT...GCTTCCTGTTGGATCACTGGAGTCTCTGTCACTTTGACAGTGATGCTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | AGAAAACAGCATCACTGTCAAAGTGACAGAGACTCCAGTGATCCAACAGGAAGCCAAGTGAATCACATTTaGGTGTTGGCTCTTGATACT | + |
|
Preference number: 4 (lower is better) Translates to: RKQHHCQSDRDSSDPTGSQVNHI*VLALDT Trigger: AGTATCAAGAGCCAACACCCAAATGTGATTCACTTG...GCTTCCTGTTGGATCACTGGAGTCTCTGTCACTTTGACAGTGATGCTGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | AGCAACTCCAGGGTGAGCTCATTTGGTTTCTTCGACTTTATGCTGAGATTTAGAGAAGAATTAGAGCCGTaGGACATCTTTTGCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: SNSRVSSFGFFDFMLRFREELEP*DIFCTI Trigger: GATGGTGCAAAAGATGTCCCACGGCTCTAATTCTTC...TCTAAATCTCAGCATAAAGTCGAAGAAACCAAATGAGCTCACCCTGGAGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | AGCAACTCCAGGGTGAGCTCATTTGGTTTCTTCGACTTTATGCTGAGATTTAGAGTGTCCATCCTGCTCTaGGAAATGAGGATGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSRVSSFGFFDFMLRFRVSILL*EMRMLS Trigger: TGATAACATCCTCATTTCCCAGAGCAGGATGGACAC...TCTAAATCTCAGCATAAAGTCGAAGAAACCAAATGAGCTCACCCTGGAGTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGTTGGGTGTTGGCTCTTaGTACTGCTTAGTGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QRQIPVLLLISQAISEDKLGVGS*YCLVPR Trigger: TCTGGGCACTAAGCAGTATCAAGAGCCAACACCCAA...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGCGAAATCAGCCACTTTaGGTGTGGGTTCCAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QRQIPVLLLISQAISEDKRNQPL*VWVPSH Trigger: GTGACTTGGAACCCACACTCAAAGTGGCTGATTTCG...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTACATTTTCAGGCGCGTaGCATCGAATTTTCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCTFSGA*HRIFFT Trigger: CGTGAAGAAAATTCGATGCCACGCGCCTGAAAATGT...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACATCACATTTGGGTGTTaGCTCTTGATACTGCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESSLQPLQLQILNGCRINITFGC*LLILLS Trigger: ACTAAGCAGTATCAAGAGCCAACACCCAAATGTGAT...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | GAATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACAATAATAGGCGCTTCTaGGATCAAAGGCAATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESSLQPLQLQILNGCRINNNRRF*DQRQFL Trigger: GAGAAATTGCCTTTGATCCCAGAAGCGCCTATTATT...GTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCTTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATAATAATAGGCGCTTCTaGGATCAAAGGCAATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKLRRLHYQHANLFFHGNNNRRF*DQRQFL Trigger: GAGAAATTGCCTTTGATCCCAGAAGCGCCTATTATT...ATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAAGCTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTATTCGATTGGGTTTCCTaGACAACAGGTACTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILSPAPTTANLKWLSYQLFDWVS*TTGTHS Trigger: TGAATGAGTACCTGTTGTCCAGGAAACCCAATCGAA...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGTCCTGCTCTGGGAAATaGGGATGTTATCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQIPVLLLISQAISEDKSCSGK*GCYQAS Trigger: TGAAGCCTGATAACATCCTCATTTCCCAGAGCAGGA...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTACAAGTGAATCACATTTaGGTGTTGGCTCTTGATACT | + |
|
Preference number: 4 (lower is better) Translates to: ILSPAPTTANLKWLSYQLQVNHI*VLALDT Trigger: AGTATCAAGAGCCAACACCCAAATGTGATTCACTTG...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | AGCAACTCCAGGGTGAGCTCATTTGGTTTCTTCGACTTTATGCTGAGATTTAGAAATAATAGGCGCTTCTaGGATCAAAGGCAATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNSRVSSFGFFDFMLRFRNNRRF*DQRQFL Trigger: GAGAAATTGCCTTTGATCCCAGAAGCGCCTATTATT...TCTAAATCTCAGCATAAAGTCGAAGAAACCAAATGAGCTCACCCTGGAGTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATCCGTCCCGCATGCCGTaGAAAGGAAACACTTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNPSRMP*KGNTCL Trigger: TAAACAAGTGTTTCCTTTCCACGGCATGCGGGACGG...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTCAAGTGAATCACATTTaGGTGTTGGCTCTTGATACT | + |
|
Preference number: 4 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCQVNHI*VLALDT Trigger: AGTATCAAGAGCCAACACCCAAATGTGATTCACTTG...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGGAAGAATTAGAGCCGTaGGACATCTTTTGCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: QRQIPVLLLISQAISEDKEELEP*DIFCTI Trigger: GATGGTGCAAAAGATGTCCCACGGCTCTAATTCTTC...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGAACACTTGTTTACACTaGCAGGTTCTTCTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRQIPVLLLISQAISEDKNTCLH*QVLLGS Trigger: AGAACCCAGAAGAACCTGTCAGTGTAAACAAGTGTT...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATACATTTTCAGGCGCGTaGCATCGAATTTTCTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNTFSGA*HRIFFT Trigger: CGTGAAGAAAATTCGATGCCACGCGCCTGAAAATGT...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATTCTCGGTGGATTATCTaGTTTTTGTGCAAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNSRWII*FLCKKA Trigger: GGCCTTCTTGCACAAAAACCAGATAATCCACCGAGA...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATGTGTCCATCCTGCTCTaGGAAATGAGGATGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNVSILL*EMRMLS Trigger: TGATAACATCCTCATTTCCCAGAGCAGGATGGACAC...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CCA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATTTCGATTGGGTTTCCTaGACAACAGGTACTCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNFDWVS*TTGTHS Trigger: TGAATGAGTACCTGTTGTCCAGGAAACCCAATCGAA...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCGGCGATCCTGAGGGTTaGCGGCCAGCATTTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GPRFYPSTGGGQLVPYKAGDPEG*RPAFPL Trigger: TAAAGGAAATGCTGGCCGCAAACCCTCAGGATCGCC...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS TCA 90 bp | TCTGTCCTGCTCTGTGCTGATTCCCGGTTACTAGGCACTTCCAAGTaGCTCTTTTCTCTGCAGCGGTCCCCTGTCCTCTCCCACTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVLLCADSRLLGTSK*LFSLQRSPVLSHLP Trigger: TGGCAAGTGGGAGAGGACAGGGGACCGCTGCAGAGAAAAGAGTCACTTGGAAGTGCCTAGTAACCGGGAATCAGCACAGAGCAGGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS TCA 90 bp | TCAGGTTTCCTGTCACCGGGCGGGCCATTCTGTCCTGCTCTGTGCTaGTTCCCGGTTACTAGGCACTTCCAAGTGACTCTTTTCTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGFLSPGGPFCPALC*FPVTRHFQVTLFSA Trigger: TGCAGAGAAAAGAGTCACTTGGAAGTGCCTAGTAACCGGGAATCAGCACAGAGCAGGACAGAATGGCCCGCCCGGTGACAGGAAACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | GGCCCAAGGTTCTACCCCAGCACCGGAGGTGGGCAGCTAGTGCCTTATAAAGCCTGGATTATCTGGTTTTaGTGCAAGAAGGCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GPRFYPSTGGGQLVPYKAWIIWF*CKKARA Trigger: TGCTCTGGCCTTCTTGCACAAAAACCAGATAATCCA...GGCTTTATAAGGCACTAGCTGCCCACCTCCGGTGCTGGGGTAGAACCTTGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS CCA 90 bp | GGCTACTCACCATCTTCAAGGTCGAGGTTTCCTTCAATTTCTTCCTaGATTCCCCAATGTCAGGTTTCCTGTCACCGGGCGGGCCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: GYSPSSRSRFPSISS*IPQCQVSCHRAGHS Trigger: AGAATGGCCCGCCCGGTGACAGGAAACCTGACATTGGGGAATCCAGGAAGAAATTGAAGGAAACCTCGACCTTGAAGATGGTGAGTAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS TCA 90 bp | GCCCAGATGCTGAGCAAACTTTACTTAGGCCGAAATCAGCCACTTTaGGTGTGGGTTCCAAGTCACTGGTGTCCATCCTGCTCTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AQMLSKLYLGRNQPL*VWVPSHWCPSCSGK Trigger: TTTCCCAGAGCAGGATGGACACCAGTGACTTGGAACCCACACTCAAAGTGGCTGATTTCGGCCTAAGTAAAGTTTGCTCAGCATCTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000145006.8 |
||
| CDS TCA 90 bp | AGAAGTCCGTCCCGCATGCCGTGGAAAGGAAACACTTGTTTACACTaGCAGGTTCTTCTGGGTTCTGCCCAGATGCTGAGCAAACTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RSPSRMPWKGNTCLH*QVLLGSAQMLSKLY Trigger: GTAAAGTTTGCTCAGCATCTGGGCAGAACCCAGAAGAACCTGTCAGTGTAAACAAGTGTTTCCTTTCCACGGCATGCGGGACGGACTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000145006.8 |
||
| CDS CCA 90 bp | AGTGCCCAGAACTCTCGAAGAGCTAGTTCAACATTTTCAGGCGCGTaGCATCGAATTTTCTTCACGGCTACTCTCGCAGAGGTCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAQNSRRASSTFSGA*HRIFFTATLAEVFL Trigger: CAGAAAGACCTCTGCGAGAGTAGCCGTGAAGAAAATTCGATGCCACGCGCCTGAAAATGTTGAACTAGCTCTTCGAGAGTTCTGGGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000127857.2 |
||
| CDS-3UTR CAA 90 bp | TCCACGGGTCAGATCTGTGTCAACTTGGTGACCCACAGGGTCAATTACCATGAATTTGGGTGTTGGCTCTaGATACTGCTTAGTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: STGQICVNLVTHRVNYHEFGCWL*ILLSAQ Trigger: CTGGGCACTAAGCAGTATCAAGAGCCAACACCCAAA...TTCATGGTAATTGACCCTGTGGGTCACCAAGTTGACACAGATCTGACCCGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS GCA 90 bp | TCGAATTTTCTTCACGGCTACTCTCGCAGAGGTCTTTCTGATGACTaGTTCATACACAACACCGTAACTACCTCGGCCTACCTCCCGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SNFLHGYSRRGLSDD*FIHNTVTTSAYLPY Trigger: ATACGGGAGGTAGGCCGAGGTAGTTACGGTGTTGTGTATGAAGCAGTCATCAGAAAGACCTCTGCGAGAGTAGCCGTGAAGAAAATTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000127857.2 |
||
| CDS-3UTR CAA 90 bp | TTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATGCCTAATGCCGTGGGACATCTTTaGCACCATCCCATCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FEGCITSTQTSSSMEMPNAVGHL*HHPILL Trigger: CAGAAGGATGGGATGGTGCAAAAGATGTCCCACGGC...ATTAGGCATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | AGAAAACAGCATCACTGTCAAAGTGACAGAGACTCCAGTGATCCAACAGGAAGCTTTGGGTGTTGGCTCTaGATACTGCTTAGTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RKQHHCQSDRDSSDPTGSFGCWL*ILLSAQ Trigger: CTGGGCACTAAGCAGTATCAAGAGCCAACACCCAAA...GCTTCCTGTTGGATCACTGGAGTCTCTGTCACTTTGACAGTGATGCTGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTAGGCGATCCTGAGGGTTaGCGGCCAGCATTTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: ILSPAPTTANLKWLSYQLGDPEG*RPAFPL Trigger: TAAAGGAAATGCTGGCCGCAAACCCTCAGGATCGCC...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS TCA 90 bp | ATCTTTTGCACCATCCCATCCTTCTGTAGGATGCACTCTTCCAAGTaGATCACATTTGGGTGTTGGCTCTTGATACTGCTTAGTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IFCTIPSFCRMHSSK*ITFGCWLLILLSAQ Trigger: CTGGGCACTAAGCAGTATCAAGAGCCAACACCCAAATGTGATTCACTTGGAAGAGTGCATCCTACAGAAGGATGGGATGGTGCAAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000127857.2 |
||
| CDS GCA 90 bp | GTGGAAAGGAAACACTTGTTTACACTGACAGGTTCTTCTGGGTTCTaGCCAGATGCTGAGCAAACTTTACTTAGGCCGAAATCAGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VERKHLFTLTGSSGF*PDAEQTLLRPKSAT Trigger: AGTGGCTGATTTCGGCCTAAGTAAAGTTTGCTCAGCATCTGGGCAGAACCCAGAAGAACCTGTCAGTGTAAACAAGTGTTTCCTTTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000145006.8 |
||
| CDS-3UTR CAA 90 bp | TTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATGCCTAATTTTGGGTGTTGGCTCTaGATACTGCTTAGTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FEGCITSTQTSSSMEMPNFGCWL*ILLSAQ Trigger: CTGGGCACTAAGCAGTATCAAGAGCCAACACCCAAA...ATTAGGCATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTGGCGATCCTGAGGGTTaGCGGCCAGCATTTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFGDPEG*RPAFPL Trigger: TAAAGGAAATGCTGGCCGCAAACCCTCAGGATCGCC...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS TCA 90 bp | GTAGGATGCACTCTTCCAAGTGAATCACATTTGGGTGTTGGCTCTTaGTACTGCTTAGTGCCCAGAACTCTCGAAGAGCTAGTTCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VGCTLPSESHLGVGS*YCLVPRTLEELVQH Trigger: ATGTTGAACTAGCTCTTCGAGAGTTCTGGGCACTAAGCAGTATCAAGAGCCAACACCCAAATGTGATTCACTTGGAAGAGTGCATCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000127857.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTAACGCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATGTGTTAGTCTTTCGATaGGGTTTCCTGGACAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: CVTQCFQNRRTRPRVTADVLVFR*GFLDNR Trigger: CCTGTTGTCCAGGAAACCCAATCGAAAGACTAACAC...ATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGCGTTACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCTTCGAAGGTTGCATTACCAGCACGCAAACCTCTTCTTCCATGGAAATGTGTTAGTCTTTCGATaGGGTTTCCTGGACAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TKLRRLHYQHANLFFHGNVLVFR*GFLDNR Trigger: CCTGTTGTCCAGGAAACCCAATCGAAAGACTAACAC...ATTTCCATGGAAGAAGAGGTTTGCGTGCTGGTAATGCAACCTTCGAAGCTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTACCGAAATCAGCCACTTaGAGTGTGGGTTCCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILSPAPTTANLKWLSYQLPKSAT*SVGSKS Trigger: TGACTTGGAACCCACACTCAAAGTGGCTGATTTCGG...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAGTTATCGTTCATCAGCCATTCTGACCCTCCAAAATGATGCCTTTAAACCGAAATCAGCCACTTaGAGTGTGGGTTCCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFSYRSSAILTLQNDAFKPKSAT*SVGSKS Trigger: TGACTTGGAACCCACACTCAAAGTGGCTGATTTCGG...TTTAAAGGCATCATTTTGGAGGGTCAGAATGGCTGATGAACGATAACTGAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | CATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTTCCGAAATCAGCCACTTaGAGTGTGGGTTCCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HQNDKVSLSTKNLQNPMFPKSAT*SVGSKS Trigger: TGACTTGGAACCCACACTCAAAGTGGCTGATTTCGG...AAACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATGCCGTGGGACATCTTTaGCACCATCCCATCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNAVGHL*HHPILL Trigger: CAGAAGGATGGGATGGTGCAAAAGATGTCCCACGGC...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTGTGTTAGTCTTTCGATaGGGTTTCCTGGACAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCVLVFR*GFLDNR Trigger: CCTGTTGTCCAGGAAACCCAATCGAAAGACTAACAC...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | TGTGTAACGCAATGTTTTCAGAACAGAAGAACACGTCCTCGGGTTACAGCAGATGTGGAAAGGAAACACTaGTTTACACTGACAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CVTQCFQNRRTRPRVTADVERKH*FTLTGS Trigger: AGAACCTGTCAGTGTAAACAAGTGTTTCCTTTCCAC...ATCTGCTGTAACCCGAGGACGTGTTCTTCTGTTCTGAAAACATTGCGTTACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTTGGATTATCTGGTTTTaGTGCAAGAAGGCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCWIIWF*CKKARA Trigger: TGCTCTGGCCTTCTTGCACAAAAACCAGATAATCCA...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAGTTATCGTTCATCAGCCATTCTGACCCTCCAAAATGATGCCTTTAAATGGATTATCTGGTTTTaGTGCAAGAAGGCCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFSYRSSAILTLQNDAFKWIIWF*CKKARA Trigger: TGCTCTGGCCTTCTTGCACAAAAACCAGATAATCCA...TTTAAAGGCATCATTTTGGAGGGTCAGAATGGCTGATGAACGATAACTGAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | TTCATCAGAATGACAAAGTATCCCTTAGCACCAAGAATCTACAGAACCCCATGTGTGGAAAGGAAACACTaGTTTACACTGACAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FIRMTKYPLAPRIYRTPCVERKH*FTLTGS Trigger: AGAACCTGTCAGTGTAAACAAGTGTTTCCTTTCCAC...ACATGGGGTTCTGTAGATTCTTGGTGCTAAGGGATACTTTGTCATTCTGATGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTCTCTCCAGCCCCTACAACTGCAAATCTTAAATGGTTGTCGTATCAACTACATTTCCTTTATCAGTaGTTTCATTCGCCCATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ILSPAPTTANLKWLSYQLHFLYQ*FHSPIH Trigger: ATGAATGGGCGAATGAAACAACTGATAAAGGAAATG...TAGTTGATACGACAACCATTTAAGATTTGCAGTTGTAGGGGCTGGAGAGAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | AGCAACTCCAGGGTGAGCTCATTTGGTTTCTTCGACTTTATGCTGAGATTTAGACATTTCCTTTATCAGTaGTTTCATTCGCCCATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SNSRVSSFGFFDFMLRFRHFLYQ*FHSPIH Trigger: ATGAATGGGCGAATGAAACAACTGATAAAGGAAATG...TCTAAATCTCAGCATAAAGTCGAAGAAACCAAATGAGCTCACCCTGGAGTTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGACAAATCCCTGTCCTTTTGTTGATATCACAAGCTATTTCAGAAGACAAGGTGGAAAGGAAACACTaGTTTACACTGACAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QRQIPVLLLISQAISEDKVERKH*FTLTGS Trigger: AGAACCTGTCAGTGTAAACAAGTGTTTCCTTTCCAC...CTTGTCTTCTGAAATAGCTTGTGATATCAACAAAAGGACAGGGATTTGTCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | AGCTTCAGTTATCGTTCATCAGCCATTCTGACCCTCCAAAATGATGCCTTTAAACATTTCCTTTATCAGTaGTTTCATTCGCCCATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SFSYRSSAILTLQNDAFKHFLYQ*FHSPIH Trigger: ATGAATGGGCGAATGAAACAACTGATAAAGGAAATG...TTTAAAGGCATCATTTTGGAGGGTCAGAATGGCTGATGAACGATAACTGAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS-3UTR CAA 90 bp | ATGTTCTGGAAGAAATTTCTTGATCACCTCACACCCTTACCGATAATAAAGAATGTATTAGATCGTACTTaGGCTGGCTACTCACCATCT | + |
|
Preference number: 5 (lower is better) Translates to: MFWKKFLDHLTPLPIIKNVLDRT*AGYSPS Trigger: AGATGGTGAGTAGCCAGCCAAAGTACGATCTAATAC...ATTCTTTATTATCGGTAAGGGTGTGAGGTGATCAAGAAATTTCTTCCAGAACAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS TCA 72 bp | CTGTCACCGGGCGGGCCATTCTGTCCTGCTCTGTGCTaGTTCCCGGTTACTAGGCACTTCCAAGTGACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSPGGPFCPALC*FPVTRHFQVTL Trigger: AAGAGTCACTTGGAAGTGCCTAGTAACCGGGAATCAGCACAGAGCAGGACAGAATGGCCCGCCCGGTGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS TCA 72 bp | TCCCGCATGCCGTGGAAAGGAAACACTTGTTTACACTaGCAGGTTCTTCTGGGTTCTGCCCAGATGCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRMPWKGNTCLH*QVLLGSAQMLS Trigger: GCTCAGCATCTGGGCAGAACCCAGAAGAACCTGTCAGTGTAAACAAGTGTTTCCTTTCCACGGCATGCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000145006.8 |
||
| CDS CCA 72 bp | CCTCGGCCTACCTCCCGTATTAGATCGTACTTTGGCTaGCTACTCACCATCTTCAAGGTCGAGGTTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PRPTSRIRSYFG*LLTIFKVEVSF Trigger: GAAGGAAACCTCGACCTTGAAGATGGTGAGTAGCCAGCCAAAGTACGATCTAATACGGGAGGTAGGCCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS CAA 90 bp | TGCCCAGATGCTGAGCAAACTTTACTTAGGCCGAAATCAGCCACTTaGAGTGTGGGTTCCAAGTCACTGGTGTCCATCCTGCTCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: CPDAEQTLLRPKSAT*SVGSKSLVSILLWE Trigger: TTCCCAGAGCAGGATGGACACCAGTGACTTGGAACCCACACTCAAAGTGGCTGATTTCGGCCTAAGTAAAGTTTGCTCAGCATCTGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000145006.8 |
||
| CDS GCA 72 bp | CTTCACGGCTACTCTCGCAGAGGTCTTTCTGATGACTaGTTCATACACAACACCGTAACTACCTCGGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LHGYSRRGLSDD*FIHNTVTTSAY Trigger: GTAGGCCGAGGTAGTTACGGTGTTGTGTATGAAGCAGTCATCAGAAAGACCTCTGCGAGAGTAGCCGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000127857.2 |
||
| CDS CCA 72 bp | CCATCTTCAAGGTCGAGGTTTCCTTCAATTTCTTCCTaGATTCCCCAATGTCAGGTTTCCTGTCACCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSSRSRFPSISS*IPQCQVSCHRA Trigger: CGCCCGGTGACAGGAAACCTGACATTGGGGAATCCAGGAAGAAATTGAAGGAAACCTCGACCTTGAAGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS TCA 72 bp | CTGAGCAAACTTTACTTAGGCCGAAATCAGCCACTTTaGGTGTGGGTTCCAAGTCACTGGTGTCCATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSKLYLGRNQPL*VWVPSHWCPSC Trigger: GCAGGATGGACACCAGTGACTTGGAACCCACACTCAAAGTGGCTGATTTCGGCCTAAGTAAAGTTTGCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000145006.8 |
||
| CDS CAA 72 bp | GCTGAGCAAACTTTACTTAGGCCGAAATCAGCCACTTaGAGTGTGGGTTCCAAGTCACTGGTGTCCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AEQTLLRPKSAT*SVGSKSLVSIL Trigger: CAGGATGGACACCAGTGACTTGGAACCCACACTCAAAGTGGCTGATTTCGGCCTAAGTAAAGTTTGCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000145006.8 |
||
| CDS CAA 72 bp | AACTACCTCGGCCTACCTCCCGTATTAGATCGTACTTaGGCTGGCTACTCACCATCTTCAAGGTCGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: NYLGLPPVLDRT*AGYSPSSRSRF Trigger: AAACCTCGACCTTGAAGATGGTGAGTAGCCAGCCAAAGTACGATCTAATACGGGAGGTAGGCCGAGGTAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS CAA 90 bp | CAACACCGTAACTACCTCGGCCTACCTCCCGTATTAGATCGTACTTaGGCTGGCTACTCACCATCTTCAAGGTCGAGGTTTCCTTCAATT | + |
|
Preference number: 6 (lower is better) Translates to: QHRNYLGLPPVLDRT*AGYSPSSRSRFPSI Trigger: AATTGAAGGAAACCTCGACCTTGAAGATGGTGAGTAGCCAGCCAAAGTACGATCTAATACGGGAGGTAGGCCGAGGTAGTTACGGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105877.9 |
||
| CDS GCA 72 bp | GGGACATCTTTTGCACCATCCCATCCTTCTGTAGGATaGACTCTTCCAAGTGAATCACATTTGGGTGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTSFAPSHPSVG*TLPSESHLGVG Trigger: GCCAACACCCAAATGTGATTCACTTGGAAGAGTGCATCCTACAGAAGGATGGGATGGTGCAAAAGATGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000127857.2 |
||
| CDS CCA 72 bp | AACTCTCGAAGAGCTAGTTCAACATTTTCAGGCGCGTaGCATCGAATTTTCTTCACGGCTACTCTCGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: NSRRASSTFSGA*HRIFFTATLAE Trigger: CTCTGCGAGAGTAGCCGTGAAGAAAATTCGATGCCACGCGCCTGAAAATGTTGAACTAGCTCTTCGAGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000127857.2 |
||
| CDS CAA 90 bp | ATCAGGGCGATCCTGAGGGTTTGCGGCCAGCATTTCCTTTATCAGTaGTTTCATTCGCCCATTCATAGACTTTTTCTTCACAGGGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: IRAILRVCGQHFLYQ*FHSPIHRLFLHRDE Trigger: CTCATCCCTGTGAAGAAAAAGTCTATGAATGGGCGAATGAAACAACTGATAAAGGAAATGCTGGCCGCAAACCCTCAGGATCGCCCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS TCA 72 bp | ACTCTTCCAAGTGAATCACATTTGGGTGTTGGCTCTTaGTACTGCTTAGTGCCCAGAACTCTCGAAGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: TLPSESHLGVGS*YCLVPRTLEEL Trigger: TAGCTCTTCGAGAGTTCTGGGCACTAAGCAGTATCAAGAGCCAACACCCAAATGTGATTCACTTGGAAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000127857.2 |
||
| CDS TCA 72 bp | ACCATCCCATCCTTCTGTAGGATGCACTCTTCCAAGTaGATCACATTTGGGTGTTGGCTCTTGATACTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TIPSFCRMHSSK*ITFGCWLLILL Trigger: AAGCAGTATCAAGAGCCAACACCCAAATGTGATTCACTTGGAAGAGTGCATCCTACAGAAGGATGGGATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000127857.2 |
||
| CDS GCA 72 bp | AAACACTTGTTTACACTGACAGGTTCTTCTGGGTTCTaGCCAGATGCTGAGCAAACTTTACTTAGGCCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KHLFTLTGSSGF*PDAEQTLLRPK Trigger: TTTCGGCCTAAGTAAAGTTTGCTCAGCATCTGGGCAGAACCCAGAAGAACCTGTCAGTGTAAACAAGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000145006.8 |
||
| CDS CAA 72 bp | ATCCTGAGGGTTTGCGGCCAGCATTTCCTTTATCAGTaGTTTCATTCGCCCATTCATAGACTTTTTCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: ILRVCGQHFLYQ*FHSPIHRLFLH Trigger: GTGAAGAAAAAGTCTATGAATGGGCGAATGAAACAACTGATAAAGGAAATGCTGGCCGCAAACCCTCAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 |
||
| CDS GCA 72 bp | CCTTCCTCTGACTCCCAAGAGCAGGGATTTAAGACTTaGACCACCACCACTAGCTATAAATCTTTTAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PSSDSQEQGFKT*TTTTSYKSFKN Trigger: ATTTTTAAAAGATTTATAGCTAGTGGTGGTGGTGCAAGTCTTAAATCCCTGCTCTTGGGAGTCAGAGGAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127857.2 |
||
| CDS CCA 72 bp | AAAAATCCATCACAAACCACAAATAATAGGCGCTTCTaGGATCAAAGGCAATTTCTCCTTTTAATGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: KNPSQTTNNRRF*DQRQFLLLMKS Trigger: AGACTTCATTAAAAGGAGAAATTGCCTTTGATCCCAGAAGCGCCTATTATTTGTGGTTTGTGATGGATTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061234.14 ENSMUST00000105876.9 ENSMUST00000105877.9 ENSMUST00000145006.8 |
||