Pregenerated sensors for PDIA6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020571Ensembl transcript IDs: ENSMUST00000057288.7, ENSMUST00000239402.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTGTTTTCTTGAGACGCTGAGGTTCACTGTTGGCAGTTTCCAGTaGCCGCATGTGCTGCTCAGAAAGGCCAGCGGCAGACAGCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: QCFLETLRFTVGSFQ*PHVLLRKASGRQLP Trigger: GGGCAGCTGTCTGCCGCTGGCCTTTCTGAGCAGCACATGCGGCCACTGGAAACTGCCAACAGTGAACCTCAGCGTCTCAAGAAAACACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR TCA 90 bp | TCACTGCTACAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTaGGGTTCACTGTTGGCAGTTTCCAGTGGCCGCATGTGCTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: SLLQFIEFVSVFLRR*GSLLAVSSGRMCCS Trigger: TGAGCAGCACATGCGGCCACTGGAAACTGCCAACAGTGAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTGTAGCAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR CCA 90 bp | CAGCAGGTCACAGTGCTGGTAGATTTTAGGCTAAACCTCAGACTCTaGTTTTATAATGTGCTACTAATTTCATACATTTATCAGCATTGT | + |
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Preference number: 1 (lower is better) Translates to: QQVTVLVDFRLNLRL*FYNVLLISYIYQHC Trigger: ACAATGCTGATAAATGTATGAAATTAGTAGCACATTATAAAACCAGAGTCTGAGGTTTAGCCTAAAATCTACCAGCACTGTGACCTGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR-3UTR GCA 90 bp | CGTCAGTGTTTTCTTGAGACGCTGAGGTTCACTGTTGGCAGTTTCCAGTGGCCGTCACTGCTGGAAAACTaGTCGCTCCCAAGGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: RQCFLETLRFTVGSFQWPSLLEN*SLPRKA Trigger: GGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGA...CGGCCACTGGAAACTGCCAACAGTGAACCTCAGCGTCTCAAGAAAACACTGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTTGCTGAGGTTCACTGTTaGCAGTTTCCAGTGGCCGCA | + |
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Preference number: 2 (lower is better) Translates to: LGTTFSTQNHILTKRSAFAEVHC*QFPVAA Trigger: TGCGGCCACTGGAAACTGCCAACAGTGAACCTCAGC...AAACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTTTCACTGCTGGAAAACTaGTCGCTCCCAAGGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LGTTFSTQNHILTKRSAFSLLEN*SLPRKA Trigger: GGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGA...AAACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR CAA 90 bp | AGTGAAGCCGCAGACAGACTCCAGGACATGAAATGCTGTTCTCACTaGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: SEAADRLQDMKCCSH*VPRFLHRTTSLPKG Trigger: ACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAGTGAGAACAGCATTTCATGTCCTGGAGTCTGTCTGCGGCTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTGTTTTCTTGAGACGCTaGGGTTCACTGTTGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: TWYHVFYTEPHPYQKVCVVFLRR*GSLLAV Trigger: AACTGCCAACAGTGAACCTCAGCGTCTCAAGAAAAC...AACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTATGCCAGAGAATACAATCCAATTCACTGCTACAATTCATAGAATTCGTCAGTGGCCGCATGTGCTaGTCAGAAAGGCCAGCGGCA | + |
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Preference number: 2 (lower is better) Translates to: KVCQRIQSNSLLQFIEFVSGRMC*SERPAA Trigger: TGCCGCTGGCCTTTCTGAGCAGCACATGCGGCCACT...GACGAATTCTATGAATTGTAGCAGTGAATTGGATTGTATTCTCTGGCATACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR-3UTR TCA 90 bp | GTTACAATAAAGTGCTCAGTCCTGAGTCTTTTCTTGTGTTCTAATGTTAATTCCACAGACTCCAGGACATaGAATGCTGTTCTCACTTGG | + |
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Preference number: 2 (lower is better) Translates to: VTIKCSVLSLFLCSNVNSTDSRT*NAVLTW Trigger: CCAAGTGAGAACAGCATTTCATGTCCTGGAGTCTGT...GGAATTAACATTAGAACACAAGAAAAGACTCAGGACTGAGCACTTTATTGTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTATGCCAGAGAATACAATCCAATTCACTGCTACAATTCATAGAATTCGTCAAGAACTTTCACTGCTaGAAAACTGCTCGCTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: KVCQRIQSNSLLQFIEFVKNFHC*KTARSQ Trigger: TTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTT...GACGAATTCTATGAATTGTAGCAGTGAATTGGATTGTATTCTCTGGCATACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR GCA 72 bp | GACAGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTaGTCGCTCCCAAGGAAAGCCCAAGGAAGGCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: DSCPEELSLLEN*SLPRKAQGRLG Trigger: GCCCAGCCTTCCTTGGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR GCA 72 bp | CGCATGTGCTGCTCAGAAAGGCCAGCGGCAGACAGCTaGCCGGAAGAACTTTCACTGCTGGAAAACTGCTCG | + |
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Preference number: 3 (lower is better) Translates to: RMCCSERPAADS*PEELSLLENCS Trigger: CGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTCTGCCGCTGGCCTTTCTGAGCAGCACATGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR CCA 72 bp | CAGCGGCAGACAGCTGCCCGGAAGAACTTTCACTGCTaGAAAACTGCTCGCTCCCAAGGAAAGCCCAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: QRQTAARKNFHC*KTARSQGKPKE Trigger: TTCCTTGGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTCTGCCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR TCA 72 bp | CAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTaGGGTTCACTGTTGGCAGTTTCCAGTGGCCGCATG | + |
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Preference number: 3 (lower is better) Translates to: QFIEFVSVFLRR*GSLLAVSSGRM Trigger: CATGCGGCCACTGGAAACTGCCAACAGTGAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| 3UTR GCA 72 bp | AATAGTGAAGCCGCAGACAGACTCCAGGACATGAAATaGTGTTCTCACTTGGTACCACGTTTTCTACACAGA | + |
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Preference number: 3 (lower is better) Translates to: NSEAADRLQDMK*CSHLVPRFLHR Trigger: TCTGTGTAGAAAACGTGGTACCAAGTGAGAACAGCATTTCATGTCCTGGAGTCTGTCTGCGGCTTCACTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR TCA 90 bp | GCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCGCTGGCGCAAGGCACTaGGGGCGGCATCTACAATGG | + |
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Preference number: 4 (lower is better) Translates to: AARKNFHCWKTARSQGKPAGARH*GRHLQW Trigger: CCATTGTAGATGCCGCCCTCAGTGCCTTGCGCCAGC...GGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR TCA 90 bp | CGTCAGTGTTTTCTTGAGACGCTGAGGTTCACTGTTGGCAGTTTCCAGTGGCCGCACCAAGGCGATCCTTaGCGAGCTGGCGCAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RQCFLETLRFTVGSFQWPHQGDP*RAGARH Trigger: GTGCCTTGCGCCAGCTCGTCAAGGATCGCCTTGGTG...CGGCCACTGGAAACTGCCAACAGTGAACCTCAGCGTCTCAAGAAAACACTGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | GCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCGCGTGCATTGATGGCTaGCATGGCAGGGTACCCGAA | + |
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Preference number: 4 (lower is better) Translates to: AARKNFHCWKTARSQGKPACIDG*HGRVPE Trigger: TTCGGGTACCCTGCCATGGCAGCCATCAATGCACGC...GGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR CCA 90 bp | GCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCGGGCGGCATCTACAATaGCTTCTCCCGTTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: AARKNFHCWKTARSQGKPGRHLQ*LLPFCH Trigger: GTGGCAGAACGGGAGAAGCCATTGTAGATGCCGCCC...GGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCAAGGAAGGCTGGGCCGTGGCCAAGTAAGAGTTTCTaGCTGCAGCTCCAGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TAGKLLAPKESPRKAGPWPSKSF*LQLQCP Trigger: TGGACACTGGAGCTGCAGGCAGAAACTCTTACTTGG...CCACGGCCCAGCCTTCCTTGGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR TCA 90 bp | GCCAGCGGCAGACAGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCACGTCTTTCTTACTTaGACTATCACCTCTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ASGRQLPGRTFTAGKLLAHVFLT*TITSAL Trigger: CAGGGCAGAGGTGATAGTTCAAGTAAGAAAGACGTG...AGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTCTGCCGCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR TCA 90 bp | ACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCAAGGAAGGCTGGGCCGTGGTGGCTATGTCTTCGTTaGTTATCTCAAGCAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TAGKLLAPKESPRKAGPWWLCLR*LSQAAL Trigger: CAGAGCTGCTTGAGATAATCAACGAAGACATAGCCA...CCACGGCCCAGCCTTCCTTGGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | ACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCAAGGAAGGCTGGGCCGTGGTTGAACTATCACCTCTaGCCTGCTTTCCAGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: TAGKLLAPKESPRKAGPWLNYHL*PAFQNC Trigger: ACAGTTCTGGAAAGCAGGGCAGAGGTGATAGTTCAA...CCACGGCCCAGCCTTCCTTGGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCACGACACAGAGCTGGTaGTCCTCGCATGTCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: SCPEELSLLENCSLPRKATTQSW*SSHVFL Trigger: CAAGAAGACATGCGAGGAGCACCAGCTCTGTGTCGT...GGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | GGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCAAGGAAGGCGTGCATTGATGGCTaGCATGGCAGGGTACCCGAA | + |
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Preference number: 4 (lower is better) Translates to: GRTFTAGKLLAPKESPRKACIDG*HGRVPE Trigger: TTCGGGTACCCTGCCATGGCAGCCATCAATGCACGC...CTTCCTTGGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | AGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCTGGCTTCTCCCGTTCTaGCACCCTGATAATCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SCPEELSLLENCSLPRKAWLLPF*HPDNLL Trigger: CAGAAGATTATCAGGGTGGCAGAACGGGAGAAGCCA...GGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | GCCAGCGGCAGACAGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTTTGAACTATCACCTCTaGCCTGCTTTCCAGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: ASGRQLPGRTFTAGKLLALNYHL*PAFQNC Trigger: ACAGTTCTGGAAAGCAGGGCAGAGGTGATAGTTCAA...AGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTCTGCCGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR TCA 90 bp | AAAACCCTATACATAAGAAACAGCCTCCAGGAACATTCAAGCAGCAGTCAGGAGCACCAAGGCGATCCTTaGCGAGCTGGCGCAAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: KTLYIRNSLQEHSSSSQEHQGDP*RAGARH Trigger: GTGCCTTGCGCCAGCTCGTCAAGGATCGCCTTGGTG...CTCCTGACTGCTGCTTGAATGTTCCTGGAGGCTGTTTCTTATGTATAGGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | GCCAGCGGCAGACAGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTTTTCAAAGCCGTTGCTaGTTTCTTCCATTCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ASGRQLPGRTFTAGKLLAFQSRC*FLPFWC Trigger: ACACCAGAATGGAAGAAAGCAGCAACGGCTTTGAAA...AGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTCTGCCGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR CCA 90 bp | AGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCTATCTCAAGCAGCTCTaGAGGAGGGGCATTATCAGA | + |
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Preference number: 4 (lower is better) Translates to: SCPEELSLLENCSLPRKAYLKQL*RRGIIR Trigger: TCTGATAATGCCCCTCCTCCAGAGCTGCTTGAGATA...GGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR CCA 90 bp | AAAACCCTATACATAAGAAACAGCCTCCAGGAACATTCAAGCAGCAGTCAGGAGCCCCTACGGGTGCTGTaGAGCCACGCCCGAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: KTLYIRNSLQEHSSSSQEPLRVL*SHARKT Trigger: TGTCTTTCGGGCGTGGCTCCACAGCACCCGTAGGGG...CTCCTGACTGCTGCTTGAATGTTCCTGGAGGCTGTTTCTTATGTATAGGGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR TCA 90 bp | CGTCAGTGTTTTCTTGAGACGCTGAGGTTCACTGTTGGCAGTTTCCAGTGGCCGAAGAATACAGACCGCTaGCTGCTAGAAAGAAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RQCFLETLRFTVGSFQWPKNTDR*LLERRC Trigger: GCACCTTCTTTCTAGCAGTCAGCGGTCTGTATTCTT...CGGCCACTGGAAACTGCCAACAGTGAACCTCAGCGTCTCAAGAAAACACTGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | CGTCAGTGTTTTCTTGAGACGCTGAGGTTCACTGTTGGCAGTTTCCAGTGGCCGAAATTTCATCTTGCGTaGATTGATGGCTGCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: RQCFLETLRFTVGSFQWPKFHLA*IDGCHG Trigger: GCCATGGCAGCCATCAATGCACGCAAGATGAAATTT...CGGCCACTGGAAACTGCCAACAGTGAACCTCAGCGTCTCAAGAAAACACTGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR CCA 90 bp | CTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTTGGGCGGCATCTACAATaGCTTCTCCCGTTCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LGTTFSTQNHILTKRSAFGRHLQ*LLPFCH Trigger: GTGGCAGAACGGGAGAAGCCATTGTAGATGCCGCCC...AAACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR TCA 90 bp | ACTTGGCAACCCACTGGGGTTTTTAATGGGAGATTAATGAAACACCCTGAAACCTCATCTTGCGTGCATTaGTGGCTGCCATGGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: TWQPTGVFNGRLMKHPETSSCVH*WLPWQG Trigger: ACCCTGCCATGGCAGCCATCAATGCACGCAAGATGA...GGTTTCAGGGTGTTTCATTAATCTCCCATTAAAAACCCCAGTGGGTTGCCAAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR TCA 90 bp | CTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTTTCATCTTGCGTGCATTaGTGGCTGCCATGGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: LGTTFSTQNHILTKRSAFSSCVH*WLPWQG Trigger: ACCCTGCCATGGCAGCCATCAATGCACGCAAGATGA...AAACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR CCA 90 bp | AAAACCCTATACATAAGAAACAGCCTCCAGGAACATTCAAGCAGCAGTCAGGAGCCAGAACCTGATTCATaGTGGCATCCACAGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KTLYIRNSLQEHSSSSQEPEPDS*WHPQLP Trigger: TGGCAGCTGTGGATGCCACCATGAATCAGGTTCTGG...CTCCTGACTGCTGCTTGAATGTTCCTGGAGGCTGTTTCTTATGTATAGGGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | ACTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTCCAAGTAAGAGTTTCTaGCTGCAGCTCCAGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TWYHVFYTEPHPYQKVCVPSKSF*LQLQCP Trigger: TGGACACTGGAGCTGCAGGCAGAAACTCTTACTTGG...AACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | AAAGTATGCCAGAGAATACAATCCAATTCACTGCTACAATTCATAGAATTCGTCGGAGCTCACCATCCTTaGCATCCCAGGGCTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: KVCQRIQSNSLLQFIEFVGAHHP*HPRAPW Trigger: CCAGGGAGCCCTGGGATGGCAAGGATGGTGAGCTCC...GACGAATTCTATGAATTGTAGCAGTGAATTGGATTGTATTCTCTGGCATACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR GCA 90 bp | GTTACAATAAAGTGCTCAGTCCTGAGTCTTTTCTTGTGTTCTAATGTTAATTCCGGAGCTCACCATCCTTaGCATCCCAGGGCTCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: VTIKCSVLSLFLCSNVNSGAHHP*HPRAPW Trigger: CCAGGGAGCCCTGGGATGGCAAGGATGGTGAGCTCC...GGAATTAACATTAGAACACAAGAAAAGACTCAGGACTGAGCACTTTATTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR CCA 90 bp | GGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCAAGGAAGACCCTGATAATCTTCTaGCTTGTTTTTGTTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRTFTAGKLLAPKESPRKTLIIF*LVFVSS Trigger: GGAGCTAACAAAAACAAGCCAGAAGATTATCAGGGT...CTTCCTTGGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR CCA 90 bp | AAAGTATGCCAGAGAATACAATCCAATTCACTGCTACAATTCATAGAATTCGTCCCCCTACGGGTGCTGTaGAGCCACGCCCGAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: KVCQRIQSNSLLQFIEFVPLRVL*SHARKT Trigger: TGTCTTTCGGGCGTGGCTCCACAGCACCCGTAGGGG...GACGAATTCTATGAATTGTAGCAGTGAATTGGATTGTATTCTCTGGCATACTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR TCA 90 bp | AAAACCCTATACATAAGAAACAGCCTCCAGGAACATTCAAGCAGCAGTCAGGAGCACGTCTTTCTTACTTaGACTATCACCTCTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KTLYIRNSLQEHSSSSQEHVFLT*TITSAL Trigger: CAGGGCAGAGGTGATAGTTCAAGTAAGAAAGACGTG...CTCCTGACTGCTGCTTGAATGTTCCTGGAGGCTGTTTCTTATGTATAGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS-3UTR CCA 90 bp | CTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTTTATCTCAAGCAGCTCTaGAGGAGGGGCATTATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTTFSTQNHILTKRSAFYLKQL*RRGIIR Trigger: TCTGATAATGCCCCTCCTCCAGAGCTGCTTGAGATA...AAACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTTCACAGGCCGTCACTCTaGATAACTTCTCTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGTTFSTQNHILTKRSAFHRPSL*ITSLLK Trigger: TTTCAACAGAGAAGTTATTCAGAGTGACGGCCTGTG...AAACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR TCA 90 bp | ACTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTGGAGACTCGCCTTTCTaGAATATCTTGATTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TWYHVFYTEPHPYQKVCVGDSPF*NILIVG Trigger: CCCTACAATCAAGATATTTCAGAAAGGCGAGTCTCC...AACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGTAGATTTTAGGCTAAACCTCAGACTCTGGTTTTATAATGTGCTACTAACGACACAGAGCTGGTaGTCCTCGCATGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VLVDFRLNLRLWFYNVLLTTQSW*SSHVFL Trigger: CAAGAAGACATGCGAGGAGCACCAGCTCTGTGTCGT...TAGTAGCACATTATAAAACCAGAGTCTGAGGTTTAGCCTAAAATCTACCAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR GCA 90 bp | TTCACTGCTACAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTGAGGTTCGTAAGAGTTTCTGCCTaGAGCTCCAGTGTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTATIHRIRQCFLETLRFVRVSA*SSSVQD Trigger: ATCCTGGACACTGGAGCTGCAGGCAGAAACTCTTAC...GAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTGTAGCAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR GCA 90 bp | ACTTGGCAACCCACTGGGGTTTTTAATGGGAGATTAATGAAACACCCTGAAACCAAATTTCATCTTGCGTaGATTGATGGCTGCCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWQPTGVFNGRLMKHPETKFHLA*IDGCHG Trigger: GCCATGGCAGCCATCAATGCACGCAAGATGAAATTT...GGTTTCAGGGTGTTTCATTAATCTCCCATTAAAAACCCCAGTGGGTTGCCAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR TCA 90 bp | TTCACTGCTACAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTGAGGTTCAAGAATACAGACCGCTaGCTGCTAGAAAGAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTATIHRIRQCFLETLRFKNTDR*LLERRC Trigger: GCACCTTCTTTCTAGCAGTCAGCGGTCTGTATTCTT...GAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTGTAGCAGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR TCA 90 bp | TTCACTGCTACAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTGAGGTTCCACAGGCCGTCACTCTaGATAACTTCTCTGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTATIHRIRQCFLETLRFHRPSL*ITSLLK Trigger: TTTCAACAGAGAAGTTATTCAGAGTGACGGCCTGTG...GAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTGTAGCAGTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR GCA 90 bp | GTTACAATAAAGTGCTCAGTCCTGAGTCTTTTCTTGTGTTCTAATGTTAATTCCGTAAGAGTTTCTGCCTaGAGCTCCAGTGTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTIKCSVLSLFLCSNVNSVRVSA*SSSVQD Trigger: ATCCTGGACACTGGAGCTGCAGGCAGAAACTCTTAC...GGAATTAACATTAGAACACAAGAAAAGACTCAGGACTGAGCACTTTATTGTAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CCA 90 bp | TTCACTGCTACAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTGAGGTTCACCCTGATAATCTTCTaGCTTGTTTTTGTTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTATIHRIRQCFLETLRFTLIIF*LVFVSS Trigger: GGAGCTAACAAAAACAAGCCAGAAGATTATCAGGGT...GAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTGTAGCAGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTATGCCAGAGAATACAATCCAATTCACTGCTACAATTCATAGAATTCGTCGGAGACTCGCCTTTCTaGAATATCTTGATTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVCQRIQSNSLLQFIEFVGDSPF*NILIVG Trigger: CCCTACAATCAAGATATTTCAGAAAGGCGAGTCTCC...GACGAATTCTATGAATTGTAGCAGTGAATTGGATTGTATTCTCTGGCATACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTATGCCAGAGAATACAATCCAATTCACTGCTACAATTCATAGAATTCGTCTGGCTATGTCTTCGTTaGTTATCTCAAGCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVCQRIQSNSLLQFIEFVWLCLR*LSQAAL Trigger: CAGAGCTGCTTGAGATAATCAACGAAGACATAGCCA...GACGAATTCTATGAATTGTAGCAGTGAATTGGATTGTATTCTCTGGCATACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR GCA 90 bp | GTTACAATAAAGTGCTCAGTCCTGAGTCTTTTCTTGTGTTCTAATGTTAATTCCTTTCAAAGCCGTTGCTaGTTTCTTCCATTCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTIKCSVLSLFLCSNVNSFQSRC*FLPFWC Trigger: ACACCAGAATGGAAGAAAGCAGCAACGGCTTTGAAA...GGAATTAACATTAGAACACAAGAAAAGACTCAGGACTGAGCACTTTATTGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCGGCAGACAGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTGGGAGCTCACCATCCTaGCCATCCCAGGGCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGRQLPGRTFTAGKLLAGSSPS*PSQGSL Trigger: CAGGGAGCCCTGGGATGGCAAGGATGGTGAGCTCCC...AGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTCTGCCGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS CCA 90 bp | GAACTGTACCCACCACTCCGCCCACCAAGGCGATCCTTGACGAGCTaGCGCAAGGCACTGAGGGCGGCATCTACAATGGCTTCTCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: ELYPPLRPPRRSLTS*RKALRAASTMASPV Trigger: AACGGGAGAAGCCATTGTAGATGCCGCCCTCAGTGCCTTGCGCCAGCTCGTCAAGGATCGCCTTGGTGGGCGGAGTGGTGGGTACAGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS GCA 90 bp | GGGCTCCCTGGGAGTGATGGTAGGAAAGGAACCACCCCCTACGGGTaGTGTGGAGCCACGCCCGAAAGACAGTTCCCTGAGAAACTCATT | + |
|
Preference number: 5 (lower is better) Translates to: GLPGSDGRKGTTPYG*CGATPERQFPEKLI Trigger: AATGAGTTTCTCAGGGAACTGTCTTTCGGGCGTGGCTCCACAGCACCCGTAGGGGGTGGTTCCTTTCCTACCATCACTCCCAGGGAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCAAGGAAGGGGAGCTCACCATCCTaGCCATCCCAGGGCTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRTFTAGKLLAPKESPRKGSSPS*PSQGSL Trigger: CAGGGAGCCCTGGGATGGCAAGGATGGTGAGCTCCC...CTTCCTTGGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS CCA 90 bp | GGGTACCCGAACCCTCCAATCCCTAGTGCGTTCTCCAGTTCATACTaGGCTCCAGCTTCTGTCCACAGCCACCCCCACATCTTCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GYPNPPIPSAFSSSY*APASVHSHPHIFFL Trigger: CAAGAAGAAGATGTGGGGGTGGCTGTGGACAGAAGCTGGAGCCCAGTATGAACTGGAGAACGCACTAGGGATTGGAGGGTTCGGGTACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCTTCATCTTGCGTGCATaGATGGCTGCCATGGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCPEELSLLENCSLPRKAFILRA*MAAMAG Trigger: CCCTGCCATGGCAGCCATCAATGCACGCAAGATGAA...GGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS GCA 90 bp | CTTGTCAGCCAGTTTCAGAAGAACTTCCAAGTAAGAGTTTCTGCCTaGAGCTCCAGTGTCCAGGATGTGAGGCAGTACGGCCACGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LVSQFQKNFQVRVSA*SSSVQDVRQYGHDT Trigger: TGTGTCGTGGCCGTACTGCCTCACATCCTGGACACTGGAGCTGCAGGCAGAAACTCTTACTTGGAAGTTCTTCTGAAACTGGCTGACAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTCCACCAAGGCGATCCTaGACGAGCTGGCGCAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TWYHVFYTEPHPYQKVCVPPRRS*TSWRKA Trigger: TGCCTTGCGCCAGCTCGTCAAGGATCGCCTTGGTGG...AACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGCGGCAGACAGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTAAACTCATTGATGCCTaGTTCACTGAAAGACCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ASGRQLPGRTFTAGKLLAKLIDA*FTERPL Trigger: AAGGGGTCTTTCAGTGAACAAGGCATCAATGAGTTT...AGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTCTGCCGCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS GCA 90 bp | TGTACTTGTCAGCCAGTTTCAGAAGAACTTCCAAGTAAGAGTTTCTaGCTGCAGCTCCAGTGTCCAGGATGTGAGGCAGTACGGCCACGA | + |
|
Preference number: 5 (lower is better) Translates to: CTCQPVSEELPSKSF*LQLQCPGCEAVRPR Trigger: TCGTGGCCGTACTGCCTCACATCCTGGACACTGGAGCTGCAGGCAGAAACTCTTACTTGGAAGTTCTTCTGAAACTGGCTGACAAGTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS GCA 90 bp | TTGTTCACTGAAAGACCCCTTGAGAAGAGCAAATTTCATCTTGCGTaGATTGATGGCTGCCATGGCAGGGTACCCGAACCCTCCAATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LFTERPLEKSKFHLA*IDGCHGRVPEPSNP Trigger: GGGATTGGAGGGTTCGGGTACCCTGCCATGGCAGCCATCAATGCACGCAAGATGAAATTTGCTCTTCTCAAGGGGTCTTTCAGTGAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGCCAGCGGCAGACAGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCATCTTTCAAAGCCGTaGCTGCTTTCTTCCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKASGRQLPGRTFTAGKLHLSKP*LLSSIL Trigger: CAGAATGGAAGAAAGCAGCAACGGCTTTGAAAGATG...CAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTCTGCCGCTGGCCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGCTCGCTCCCAAGGAAAGCCCTTAGCTCCAAATATCTaGATGGTAGGAAATCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AARKNFHCWKTARSQGKPLAPNI*MVGNPW Trigger: CCAGGGATTTCCTACCATCAAGATATTTGGAGCTAA...GGGCTTTCCTTGGGAGCGAGCAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS GCA 90 bp | AAATCCCTGGACACCATACTGACCTCCCAGGGACTGATGTTTGTCTaGATTGACGGCCCCGACTTTAACAACATCTTTCAAAGCCGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSLDTILTSQGLMFV*IDGPDFNNIFQSRC Trigger: GCAACGGCTTTGAAAGATGTTGTTAAAGTCGGGGCCGTCAATGCAGACAAACATCAGTCCCTGGGAGGTCAGTATGGTGTCCAGGGATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAGGCCAGCGGCAGACAGCTGCCCGGAAGAACTTTCACTGCTGGAAAACTGTTGGCTATGTCTTCGTaGATTATCTCAAGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKASGRQLPGRTFTAGKLLAMSS*IISSSS Trigger: AGAGCTGCTTGAGATAATCAACGAAGACATAGCCAA...CAGTTTTCCAGCAGTGAAAGTTCTTCCGGGCAGCTGTCTGCCGCTGGCCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS TCA 90 bp | CTTATCAAAGGTGTCATCCGTCAGCTCTACCACGTCTTTCTTACTTaGACTATCACCTCTGCCCTGCTTTCCAGAACTGTACCCACCACT | + |
|
Preference number: 5 (lower is better) Translates to: LIKGVIRQLYHVFLT*TITSALLSRTVPTT Trigger: AGTGGTGGGTACAGTTCTGGAAAGCAGGGCAGAGGTGATAGTTCAAGTAAGAAAGACGTGGTAGAGCTGACGGATGACACCTTTGATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | AAAACCCTATACATAAGAAACAGCCTCCAGGAACATTCAAGCAGCAGTCAGGAGCCACGTCTTTCTTACTaGAACTATCACCTCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTLYIRNSLQEHSSSSQEPRLSY*NYHLCP Trigger: AGGGCAGAGGTGATAGTTCAAGTAAGAAAGACGTGG...CTCCTGACTGCTGCTTGAATGTTCCTGGAGGCTGTTTCTTATGTATAGGGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTCCACGTCTTTCTTACTaGAACTATCACCTCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TWYHVFYTEPHPYQKVCVPRLSY*NYHLCP Trigger: AGGGCAGAGGTGATAGTTCAAGTAAGAAAGACGTGG...AACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTTAGAGCAAATTTCATCTaGCGTGCATTGATGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGTTFSTQNHILTKRSAFRANFI*RALMAA Trigger: GGCAGCCATCAATGCACGCAAGATGAAATTTGCTCT...AAACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS TCA 90 bp | TACAAGCCACAGGCCGTCACTCTGAATAACTTCTCTGTTGAAATTTaGTGGCGTCAACTCGATGACATCATCACTAGAAGAATACAGACC | + |
|
Preference number: 5 (lower is better) Translates to: YKPQAVTLNNFSVEI*WRQLDDIITRRIQT Trigger: GGTCTGTATTCTTCTAGTGATGATGTCATCGAGTTGACGCCATCAAATTTCAACAGAGAAGTTATTCAGAGTGACGGCCTGTGGCTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | ACAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTGAGGTTCACTGTTGGCCATCTTTCAAAGCCGTaGCTGCTTTCTTCCATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TIHRIRQCFLETLRFTVGHLSKP*LLSSIL Trigger: CAGAATGGAAGAAAGCAGCAACGGCTTTGAAAGATG...GCCAACAGTGAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | AAAACCCTATACATAAGAAACAGCCTCCAGGAACATTCAAGCAGCAGTCAGGAGTTAGCTCCAAATATCTaGATGGTAGGAAATCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KTLYIRNSLQEHSSSSQELAPNI*MVGNPW Trigger: CCAGGGATTTCCTACCATCAAGATATTTGGAGCTAA...CTCCTGACTGCTGCTTGAATGTTCCTGGAGGCTGTTTCTTATGTATAGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | CTTGGTACCACGTTTTCTACACAGAACCACATCCTTACCAAAAGGTCTGCGTTTCACTTTTCCCTTTGTTaGCTCCTTTACTTCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGTTFSTQNHILTKRSAFHFSLC*LLYFCS Trigger: GCTACAGAAGTAAAGGAGCAAACAAAGGGAAAAGTG...AAACGCAGACCTTTTGGTAAGGATGTGGTTCTGTGTAGAAAACGTGGTACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | ACTTGGCAACCCACTGGGGTTTTTAATGGGAGATTAATGAAACACCCTGAAACCTTGGCTATGTCTTCGTaGATTATCTCAAGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TWQPTGVFNGRLMKHPETLAMSS*IISSSS Trigger: AGAGCTGCTTGAGATAATCAACGAAGACATAGCCAA...GGTTTCAGGGTGTTTCATTAATCTCCCATTAAAAACCCCAGTGGGTTGCCAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | TTCACTGCTACAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTGAGGTTCCCCCACATCTTCTTCTaGTACTTGTCAGCCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTATIHRIRQCFLETLRFPHIFF*YLSASF Trigger: GAAACTGGCTGACAAGTACAAGAAGAAGATGTGGGG...GAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTGTAGCAGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | AAAACCCTATACATAAGAAACAGCCTCCAGGAACATTCAAGCAGCAGTCAGGAGTCACTGAAAGACCCCTaGAGAAGAGCAAATTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KTLYIRNSLQEHSSSSQESLKDP*RRANFI Trigger: GATGAAATTTGCTCTTCTCAAGGGGTCTTTCAGTGA...CTCCTGACTGCTGCTTGAATGTTCCTGGAGGCTGTTTCTTATGTATAGGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | TTCACTGCTACAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTGAGGTTCCACTTTTCCCTTTGTTaGCTCCTTTACTTCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: FTATIHRIRQCFLETLRFHFSLC*LLYFCS Trigger: GCTACAGAAGTAAAGGAGCAAACAAAGGGAAAAGTG...GAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTGTAGCAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | TTCACTGCTACAATTCATAGAATTCGTCAGTGTTTTCTTGAGACGCTGAGGTTCTCACTGAAAGACCCCTaGAGAAGAGCAAATTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FTATIHRIRQCFLETLRFSLKDP*RRANFI Trigger: GATGAAATTTGCTCTTCTCAAGGGGTCTTTCAGTGA...GAACCTCAGCGTCTCAAGAAAACACTGACGAATTCTATGAATTGTAGCAGTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | GTTACAATAAAGTGCTCAGTCCTGAGTCTTTTCTTGTGTTCTAATGTTAATTCCCCCCACATCTTCTTCTaGTACTTGTCAGCCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VTIKCSVLSLFLCSNVNSPHIFF*YLSASF Trigger: GAAACTGGCTGACAAGTACAAGAAGAAGATGTGGGG...GGAATTAACATTAGAACACAAGAAAAGACTCAGGACTGAGCACTTTATTGTAAC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTATGCCAGAGAATACAATCCAATTCACTGCTACAATTCATAGAATTCGTCAGAGCAAATTTCATCTaGCGTGCATTGATGGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KVCQRIQSNSLLQFIEFVRANFI*RALMAA Trigger: GGCAGCCATCAATGCACGCAAGATGAAATTTGCTCT...GACGAATTCTATGAATTGTAGCAGTGAATTGGATTGTATTCTCTGGCATACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTATGCCAGAGAATACAATCCAATTCACTGCTACAATTCATAGAATTCGTCAAACTCATTGATGCCTaGTTCACTGAAAGACCCCTT | + |
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Preference number: 5 (lower is better) Translates to: KVCQRIQSNSLLQFIEFVKLIDA*FTERPL Trigger: AAGGGGTCTTTCAGTGAACAAGGCATCAATGAGTTT...GACGAATTCTATGAATTGTAGCAGTGAATTGGATTGTATTCTCTGGCATACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CCA 72 bp | CCACCACTCCGCCCACCAAGGCGATCCTTGACGAGCTaGCGCAAGGCACTGAGGGCGGCATCTACAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: PPLRPPRRSLTS*RKALRAASTMA Trigger: AGCCATTGTAGATGCCGCCCTCAGTGCCTTGCGCCAGCTCGTCAAGGATCGCCTTGGTGGGCGGAGTGGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS GCA 72 bp | GGGAGTGATGGTAGGAAAGGAACCACCCCCTACGGGTaGTGTGGAGCCACGCCCGAAAGACAGTTCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GSDGRKGTTPYG*CGATPERQFPE Trigger: CTCAGGGAACTGTCTTTCGGGCGTGGCTCCACAGCACCCGTAGGGGGTGGTTCCTTTCCTACCATCACTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CAA 90 bp | TGCTTTCCAGAACTGTACCCACCACTCCGCCCACCAAGGCGATCCTaGACGAGCTGGCGCAAGGCACTGAGGGCGGCATCTACAATGGCT | + |
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Preference number: 6 (lower is better) Translates to: CFPELYPPLRPPRRS*TSWRKALRAASTMA Trigger: AGCCATTGTAGATGCCGCCCTCAGTGCCTTGCGCCAGCTCGTCAAGGATCGCCTTGGTGGGCGGAGTGGTGGGTACAGTTCTGGAAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CAA 90 bp | ACGTCACTGAGGTCAATGTCGTCCTCCACAGGGAGCTCACCATCCTaGCCATCCCAGGGCTCCCTGGGAGTGATGGTAGGAAAGGAACCA | + |
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Preference number: 6 (lower is better) Translates to: TSLRSMSSSTGSSPS*PSQGSLGVMVGKEP Trigger: TGGTTCCTTTCCTACCATCACTCCCAGGGAGCCCTGGGATGGCAAGGATGGTGAGCTCCCTGTGGAGGACGACATTGACCTCAGTGACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CAA 90 bp | GGCAGTACGGCCACGACACAGAGCTGGTGCTCCTCGCATGTCTTCTaGGCTATGTCTTCGTTGATTATCTCAAGCAGCTCTGGAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: GSTATTQSWCSSHVF*AMSSLIISSSSGGG Trigger: CCCTCCTCCAGAGCTGCTTGAGATAATCAACGAAGACATAGCCAAGAAGACATGCGAGGAGCACCAGCTCTGTGTCGTGGCCGTACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS GCA 72 bp | GCTCTACCACGTCTTTCTTACTTGAACTATCACCTCTaGCCTGCTTTCCAGAACTGTACCCACCACTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: ALPRLSYLNYHL*PAFQNCTHHSA Trigger: GGCGGAGTGGTGGGTACAGTTCTGGAAAGCAGGGCAGAGGTGATAGTTCAAGTAAGAAAGACGTGGTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CAA 90 bp | TCACTGAAAGACCCCTTGAGAAGAGCAAATTTCATCTTGCGTGCATaGATGGCTGCCATGGCAGGGTACCCGAACCCTCCAATCCCTAGT | + |
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Preference number: 6 (lower is better) Translates to: SLKDPLRRANFILRA*MAAMAGYPNPPIPS Trigger: ACTAGGGATTGGAGGGTTCGGGTACCCTGCCATGGCAGCCATCAATGCACGCAAGATGAAATTTGCTCTTCTCAAGGGGTCTTTCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS GCA 72 bp | CAGTTTCAGAAGAACTTCCAAGTAAGAGTTTCTGCCTaGAGCTCCAGTGTCCAGGATGTGAGGCAGTACGGC | + |
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Preference number: 6 (lower is better) Translates to: QFQKNFQVRVSA*SSSVQDVRQYG Trigger: GCCGTACTGCCTCACATCCTGGACACTGGAGCTGCAGGCAGAAACTCTTACTTGGAAGTTCTTCTGAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CAA 72 bp | GCCACGACACAGAGCTGGTGCTCCTCGCATGTCTTCTaGGCTATGTCTTCGTTGATTATCTCAAGCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ATTQSWCSSHVF*AMSSLIISSSS Trigger: AGAGCTGCTTGAGATAATCAACGAAGACATAGCCAAGAAGACATGCGAGGAGCACCAGCTCTGTGTCGTGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS TCA 72 bp | GGTGTCATCCGTCAGCTCTACCACGTCTTTCTTACTTaGACTATCACCTCTGCCCTGCTTTCCAGAACTGTA | + |
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Preference number: 6 (lower is better) Translates to: GVIRQLYHVFLT*TITSALLSRTV Trigger: TACAGTTCTGGAAAGCAGGGCAGAGGTGATAGTTCAAGTAAGAAAGACGTGGTAGAGCTGACGGATGACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS GCA 72 bp | GACACCATACTGACCTCCCAGGGACTGATGTTTGTCTaGATTGACGGCCCCGACTTTAACAACATCTTTCAA | + |
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Preference number: 6 (lower is better) Translates to: DTILTSQGLMFV*IDGPDFNNIFQ Trigger: TTGAAAGATGTTGTTAAAGTCGGGGCCGTCAATGCAGACAAACATCAGTCCCTGGGAGGTCAGTATGGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CCA 72 bp | CTTGGCTATGTCTTCGTTGATTATCTCAAGCAGCTCTaGAGGAGGGGCATTATCAGAGAACAAATCGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: LGYVFVDYLKQL*RRGIIREQIEG Trigger: GCCCTCGATTTGTTCTCTGATAATGCCCCTCCTCCAGAGCTGCTTGAGATAATCAACGAAGACATAGCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CAA 72 bp | AGGTGTCATCCGTCAGCTCTACCACGTCTTTCTTACTaGAACTATCACCTCTGCCCTGCTTTCCAGAACTGT | + |
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Preference number: 6 (lower is better) Translates to: RCHPSALPRLSY*NYHLCPAFQNC Trigger: ACAGTTCTGGAAAGCAGGGCAGAGGTGATAGTTCAAGTAAGAAAGACGTGGTAGAGCTGACGGATGACACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CAA 90 bp | TCTTATCAAAGGTGTCATCCGTCAGCTCTACCACGTCTTTCTTACTaGAACTATCACCTCTGCCCTGCTTTCCAGAACTGTACCCACCAC | + |
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Preference number: 6 (lower is better) Translates to: SYQRCHPSALPRLSY*NYHLCPAFQNCTHH Trigger: GTGGTGGGTACAGTTCTGGAAAGCAGGGCAGAGGTGATAGTTCAAGTAAGAAAGACGTGGTAGAGCTGACGGATGACACCTTTGATAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS TCA 72 bp | CAGGCCGTCACTCTGAATAACTTCTCTGTTGAAATTTaGTGGCGTCAACTCGATGACATCATCACTAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: QAVTLNNFSVEI*WRQLDDIITRR Trigger: TCTTCTAGTGATGATGTCATCGAGTTGACGCCATCAAATTTCAACAGAGAAGTTATTCAGAGTGACGGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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| CDS CCA 72 bp | AATGGCTTCTCCCGTTCTGCCACCCTGATAATCTTCTaGCTTGTTTTTGTTAGCTCCAAATATCTTGATGGT | + |
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Preference number: 6 (lower is better) Translates to: NGFSRSATLIIF*LVFVSSKYLDG Trigger: ACCATCAAGATATTTGGAGCTAACAAAAACAAGCCAGAAGATTATCAGGGTGGCAGAACGGGAGAAGCCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057288.7 ENSMUST00000239402.2 |
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