Pregenerated sensors for PDIA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022844Ensembl transcript IDs: ENSMUST00000023550.9
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGCTGCCAGGGCCTCGTTaGCGGTGGCATCGACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QKEQNRYHSQCKGRAPCRLPGPR*RWHRQL Trigger: CAGCTGTCGATGCCACCGTCAACGAGGCCCTGGCAG...CCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR GCA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGAGCCGCCCTCATCTaGCCAGGGAGTCTCGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGGAALI*PGSLGD Trigger: GTCCCCGAGACTCCCTGGGCAGATGAGGGCGGCTCC...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGGGGGACCTGGGGCTGTaGTGGCAGTGGATTCTTCAA | + |
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Preference number: 4 (lower is better) Translates to: NKIGIIHSVKEGPLAGGGGDLGL*WQWILQ Trigger: TTGAAGAATCCACTGCCACCACAGCCCCAGGTCCCC...CCCGCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTT 53% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGGGTAGTAGTGGAAGGTaGGGTAGGCCTTCACGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NKIGIIHSVKEGPLAGGGGSSGR*GRPSRP Trigger: AGGCCGTGAAGGCCTACCCCACCTTCCACTACTACC...CCCGCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR GCA 90 bp | CAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGGCCTTGGCCTTTCACTaGCTGGGCCACGGTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: QKEQNRYHSQCKGRAPCRALAFH*LGHGGQ Trigger: CTGTCCACCGTGGCCCAGGCAGTGAAAGGCCAAGGC...CCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | CAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGCAGCAGACGGTGCCTTaGCCTTTCACTGCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QKEQNRYHSQCKGRAPCRQQTVP*PFTAWA Trigger: GGCCCAGGCAGTGAAAGGCCAAGGCACCGTCTGCTG...CCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGCGATGTCCTCGGCCGTaGACCCATAGTTCTCATACG | + |
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Preference number: 4 (lower is better) Translates to: NKIGIIHSVKEGPLAGGGRCPRP*THSSHT Trigger: CGTATGAGAACTATGGGTCCACGGCCGAGGACATCG...CCCGCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | CAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGGCTGTTCTTCCCACGTaGGCTCTGGAGGTGGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QKEQNRYHSQCKGRAPCRAVLPT*ALEVGE Trigger: CTCCCCCACCTCCAGAGCCCACGTGGGAAGAACAGC...CCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR TCA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCATGGGGCGTGGAACATaGCGAGGACAGAGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGMGRGT*RGQRSA Trigger: AGCACTCCTCTGTCCTCGTCATGTTCCACGCCCCAT...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR GCA 90 bp | CAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGCCACCCAGCAGACGGTaGCTTGGCCTTTCACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: QKEQNRYHSQCKGRAPCRPPSRR*LGLSLP Trigger: AGGCAGTGAAAGGCCAAGGCACCGTCTGCTGGGTGG...CCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGACAATGTCCACACCATaGGGCGTGGAACATGACGAG | + |
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Preference number: 4 (lower is better) Translates to: NKIGIIHSVKEGPLAGGGTMSTP*GVEHDE Trigger: CTCGTCATGTTCCACGCCCCATGGTGTGGACATTGT...CCCGCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR TCA 90 bp | AACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGCGGAGATTCTCTCAATaGGCGAAGAGACCTTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NKIGIIHSVKEGPLAGGGRRFSQ*AKRPLW Trigger: CCACAAAGGTCTCTTCGCTCATTGAGAGAATCTCCG...CCCGCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR GCA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGTGGCATCGACAGCTaGAAGTACACCAGAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGGGIDS*KYTRAL Trigger: GAGAGCTCTGGTGTACTTGCAGCTGTCGATGCCACC...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR GCA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCTGTAGCACGCTTGTCTaGTGTTCTTCCCACGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGCSTLV*CSSHVG Trigger: GCCCACGTGGGAAGAACAGCAGACAAGCGTGCTACA...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGCTGTGGTGGCAGTaGATTCTTCAACCACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGGLWWQ*ILQPLH Trigger: GTGGAGTGGTTGAAGAATCCACTGCCACCACAGCCC...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR TCA 90 bp | CAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGGGAAACGCTGAGATGTaGAATCTTCCTGCCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: QKEQNRYHSQCKGRAPCRGNAEM*NLPARA Trigger: GGCCCTGGCAGGAAGATTTCACATCTCAGCGTTTCC...CCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR TCA 90 bp | CAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGTTTTCTCTAGTCTCTTaGGGTCTCCCTCCCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QKEQNRYHSQCKGRAPCRFSLVS*GLPPGG Trigger: CCCTCCGGGAGGGAGACCTCAAGAGACTAGAGAAAA...CCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | CAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGGCGAAGAGACCTTTGTaGAGGACAGCCATGTCGGCA | + |
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Preference number: 4 (lower is better) Translates to: QKEQNRYHSQCKGRAPCRAKRPL*RTAMSA Trigger: TGCCGACATGGCTGTCCTCCACAAAGGTCTCTTCGC...CCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGTGTGCACAACATCTTTaGCTCCAGGATCTTCTTCCC | + |
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Preference number: 4 (lower is better) Translates to: NKIGIIHSVKEGPLAGGGCAQHL*LQDLLP Trigger: GGGAAGAAGATCCTGGAGCCAAAGATGTTGTGCACA...CCCGCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGACCACACCATGGGGCGTaGAACATGACGAGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGPHHGA*NMTRTE Trigger: CTCTGTCCTCGTCATGTTCCACGCCCCATGGTGTGG...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGCTGTGGCAGTGAAGTaGGGGATGACCTTCTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGAVAVK*GMTFLQ Trigger: CTGTAAGAAGGTCATCCCCCACTTCACTGCCACAGC...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | ATTCAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCGGCCTCGCACTTGGGTaGCAGCCTTCTGGAAATGTG | + |
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Preference number: 4 (lower is better) Translates to: IQKEQNRYHSQCKGRAPCGLALG*QPSGNV Trigger: CACATTTCCAGAAGGCTGCCACCCAAGTGCGAGGCC...GCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAATGTGGCCTCGCACTTaGGTGGCAGCCTTCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGMWPRT*VAAFWK Trigger: TTTCCAGAAGGCTGCCACCCAAGTGCGAGGCCACAT...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR TCA 90 bp | CAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGTCTGGAAATGTGGCATaGTTCTCTTGCACATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QKEQNRYHSQCKGRAPCRSGNVA*FSCTCC Trigger: GCAGCATGTGCAAGAGAATCATGCCACATTTCCAGA...CCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR GCA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGACAATTTTCTACTCTCTaGGTCACCGCAGTCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGQFSTL*VTAVHP Trigger: TGGGTGGACTGCGGTGACGCAGAGAGTAGAAAATTG...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGAACATCATGAGCAGTaGCTTCTCTTCTCTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGEHHEQ*LLFSLQ Trigger: CTGAAGAGAGAAGAGAAGCCACTGCTCATGATGTTC...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR TCA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCTTTTGTCCTTTGGGCTaGGGTCAACTTTCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGFCPLG*GQLSSS Trigger: AGAAGATGAAAGTTGACCTCAGCCCAAAGGACAAAA...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR TCA 90 bp | ATTCAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCCTTGGTTCTTGTCCTTaGCACAGTCTACAGCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: IQKEQNRYHSQCKGRAPCLGSCP*HSLQQH Trigger: GTGCTGCTGTAGACTGTGTCAAGGACAAGAACCAAG...GCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGAGCACTCTCAAACTCTaGCTTCATTTTCTTACAATG | + |
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Preference number: 4 (lower is better) Translates to: NKIGIIHSVKEGPLAGGGSTLKL*LHFLTM Trigger: CATTGTAAGAAAATGAAGCCAGAGTTTGAGAGTGCT...CCCGCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR GCA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAAAGATGACTTTCAGCTaGTACCTCGGATTCCGAGTA | + |
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Preference number: 4 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGKMTFS*YLGFRV Trigger: TACTCGGAATCCGAGGTAGCAGCTGAAAGTCATCTT...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR GCA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGATTCTCACTGTCGATGTaGACAACATCTTTGGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGFSLSM*TTSLAP Trigger: TGGAGCCAAAGATGTTGTGCACATCGACAGTGAGAA...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGATGCTCCTTCACAAACTaGTCAAAGTCTTCATCGGTC | + |
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Preference number: 4 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGCSFTN*SKSSSV Trigger: GACCGATGAAGACTTTGACCAGTTTGTGAAGGAGCA...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CCA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAAGCCTTCTGGAAATGTaGCATGATTCTCTTGCACAT | + |
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Preference number: 4 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGSLLEM*HDSLAH Trigger: ATGTGCAAGAGAATCATGCCACATTTCCAGAAGGCT...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 90 bp | GCCGCCCTCATCTGCCCAGGGAGTCTCGGGGACCTGGGGCTGTGGTaGCAGTGGATTCTTCAACCACTCCACGATGTCCTCGGCCGTGGA | + |
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Preference number: 5 (lower is better) Translates to: AALICPGSLGDLGLW*QWILQPLHDVLGRG Trigger: TCCACGGCCGAGGACATCGTGGAGTGGTTGAAGAATCCACTGCCACCACAGCCCCAGGTCCCCGAGACTCCCTGGGCAGATGAGGGCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 90 bp | GGAGCCGCCCTCATCTGCCCAGGGAGTCTCGGGGACCTGGGGCTGTaGTGGCAGTGGATTCTTCAACCACTCCACGATGTCCTCGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: GAALICPGSLGDLGL*WQWILQPLHDVLGR Trigger: ACGGCCGAGGACATCGTGGAGTGGTTGAAGAATCCACTGCCACCACAGCCCCAGGTCCCCGAGACTCCCTGGGCAGATGAGGGCGGCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 90 bp | TGCGTCACCGCAGTCCACCCAGCAGACGGTGCCTTGGCCTTTCACTaGCTGGGCCACGGTGGACAGGAGCTTAAGATGACTTTCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: CVTAVHPADGALAFH*LGHGGQELKMTFSC Trigger: GCAGCTGAAAGTCATCTTAAGCTCCTGTCCACCGTGGCCCAGGCAGTGAAAGGCCAAGGCACCGTCTGCTGGGTGGACTGCGGTGACGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 90 bp | GTCAAAGTCTTCATCGGTCAGGTGATAAACGGAGCCGCCCTCATCTaGCCAGGGAGTCTCGGGGACCTGGGGCTGTGGTGGCAGTGGATT | + |
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Preference number: 5 (lower is better) Translates to: VKVFIGQVINGAALI*PGSLGDLGLWWQWI Trigger: AATCCACTGCCACCACAGCCCCAGGTCCCCGAGACTCCCTGGGCAGATGAGGGCGGCTCCGTTTATCACCTGACCGATGAAGACTTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 90 bp | TATCCCCCACCAGATGTAGCACGCTTGTCTGCTGTTCTTCCCACGTaGGCTCTGGAGGTGGGGGAGCCTCAGGGTTCTGCATCCACTCAA | + |
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Preference number: 5 (lower is better) Translates to: YPPPDVARLSAVLPT*ALEVGEPQGSASTQ Trigger: TTGAGTGGATGCAGAACCCTGAGGCTCCCCCACCTCCAGAGCCCACGTGGGAAGAACAGCAGACAAGCGTGCTACATCTGGTGGGGGATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 90 bp | GTGAAATCTTCCTGCCAGGGCCTCGTTGACGGTGGCATCGACAGCTaGAAGTACACCAGAGCTCTCAGCATCTCCGTGGAGGACTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: VKSSCQGLVDGGIDS*KYTRALSISVEDFS Trigger: GCTGAAGTCCTCCACGGAGATGCTGAGAGCTCTGGTGTACTTGCAGCTGTCGATGCCACCGTCAACGAGGCCCTGGCAGGAAGATTTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 90 bp | ATCCCAGCCAGGACAATGTGGCCTCGCACTTGGGTGGCAGCCTTCTaGAAATGTGGCATGATTCTCTTGCACATGCTGCACCAGGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: IPARTMWPRTWVAAF*KCGMILLHMLHQGA Trigger: TGCTCCCTGGTGCAGCATGTGCAAGAGAATCATGCCACATTTCCAGAAGGCTGCCACCCAAGTGCGAGGCCACATTGTCCTGGCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 90 bp | GTGGTGGCAGTGGATTCTTCAACCACTCCACGATGTCCTCGGCCGTaGACCCATAGTTCTCATACGGGAACAGAAACCGCCCCTTCTCGA | + |
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Preference number: 5 (lower is better) Translates to: VVAVDSSTTPRCPRP*THSSHTGTETAPSR Trigger: TCGAGAAGGGGCGGTTTCTGTTCCCGTATGAGAACTATGGGTCCACGGCCGAGGACATCGTGGAGTGGTTGAAGAATCCACTGCCACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CAA 90 bp | AACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGCCTGCCAGGGCCTCGTaGACGGTGGCATCGACAGCT | + |
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Preference number: 5 (lower is better) Translates to: NKIGIIHSVKEGPLAGGGPARAS*TVASTA Trigger: AGCTGTCGATGCCACCGTCAACGAGGCCCTGGCAGG...CCCGCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS TCA 90 bp | AGGGTAGCCGCGGACATTGTACTCTTCCTTGATGTTCTCGAACTCTaGTGGGTAGACGTTCATCCCAGCCAGGACAATGTGGCCTCGCAC | + |
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Preference number: 5 (lower is better) Translates to: RVAADIVLFLDVLEL*WVDVHPSQDNVASH Trigger: GTGCGAGGCCACATTGTCCTGGCTGGGATGAACGTCTACCCATCAGAGTTCGAGAACATCAAGGAAGAGTACAATGTCCGCGGCTACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 90 bp | CAGGACAATGTGGCCTCGCACTTGGGTGGCAGCCTTCTGGAAATGTaGCATGATTCTCTTGCACATGCTGCACCAGGGAGCATAGAACAT | + |
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Preference number: 5 (lower is better) Translates to: QDNVASHLGGSLLEM*HDSLAHAAPGSIEH Trigger: ATGTTCTATGCTCCCTGGTGCAGCATGTGCAAGAGAATCATGCCACATTTCCAGAAGGCTGCCACCCAAGTGCGAGGCCACATTGTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 90 bp | TCTCATACTTTTCTACGAGCTTCCCGTAGTGGTAGTAGTGGAAGGTaGGGTAGGCCTTCACGGCCTCCTGCTGACACAGGTCTTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SHTFLRASRSGSSGR*GRPSRPPADTGLGS Trigger: AGAACCAAGACCTGTGTCAGCAGGAGGCCGTGAAGGCCTACCCCACCTTCCACTACTACCACTACGGGAAGCTCGTAGAAAAGTATGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS TCA 90 bp | CGCTTGCTGCTCGCCATTCTTAAAATACTTCAGGGTAGGAAACGCTaGGATGTGAAATCTTCCTGCCAGGGCCTCGTTGACGGTGGCATC | + |
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Preference number: 5 (lower is better) Translates to: RLLLAILKILQGRKR*DVKSSCQGLVDGGI Trigger: GATGCCACCGTCAACGAGGCCCTGGCAGGAAGATTTCACATCTCAGCGTTTCCTACCCTGAAGTATTTTAAGAATGGCGAGCAGCAAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS TCA 90 bp | TGCTCGCCATTCTTAAAATACTTCAGGGTAGGAAACGCTGAGATGTaGAATCTTCCTGCCAGGGCCTCGTTGACGGTGGCATCGACAGCT | + |
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Preference number: 5 (lower is better) Translates to: CSPFLKYFRVGNAEM*NLPARASLTVASTA Trigger: AGCTGTCGATGCCACCGTCAACGAGGCCCTGGCAGGAAGATTTCACATCTCAGCGTTTCCTACCCTGAAGTATTTTAAGAATGGCGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 90 bp | TCTCTTGCACATGCTGCACCAGGGAGCATAGAACATCATGAGCAGTaGCTTCTCTTCTCTCTTCAGGAGTCGTCTGAAGTCCTTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: SLAHAAPGSIEHHEQ*LLFSLQESSEVLLT Trigger: AGTGAGAAGGACTTCAGACGACTCCTGAAGAGAGAAGAGAAGCCACTGCTCATGATGTTCTATGCTCCCTGGTGCAGCATGTGCAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CAA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCCTTTTCTCTAGTCTCTaGAGGTCTCCCTCCCGGAGG | + |
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Preference number: 5 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGLFSSL*RSPSRR Trigger: CCTCCGGGAGGGAGACCTCAAGAGACTAGAGAAAAG...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CAA 90 bp | AACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCGGGATGTGCACAACATCTTaGGCTCCAGGATCTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: NKIGIIHSVKEGPLAGGGMCTTS*APGSSS Trigger: GGAAGAAGATCCTGGAGCCAAAGATGTTGTGCACAT...CCCGCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CAA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCTGTGGCATGATTCTCTaGCACATGCTGCACCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGCGMIL*HMLHQG Trigger: TCCCTGGTGCAGCATGTGCAAGAGAATCATGCCACA...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAAATGTGGCCTCGCACTaGGGTGGCAGCCTTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGNVASH*GGSLLE Trigger: TTCCAGAAGGCTGCCACCCAAGTGCGAGGCCACATT...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 90 bp | CACTCAATAAACTTCTTCTTTGTTCTGAGCGCAGGCACCGCTTGCTaGTCGCCATTCTTAAAATACTTCAGGGTAGGAAACGCTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: HSINFFFVLSAGTAC*SPFLKYFRVGNAEM Trigger: CATCTCAGCGTTTCCTACCCTGAAGTATTTTAAGAATGGCGAGCAGCAAGCGGTGCCTGCGCTCAGAACAAAGAAGAAGTTTATTGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 90 bp | ATCCACTCAATAAACTTCTTCTTTGTTCTGAGCGCAGGCACCGCTTaGTGCTCGCCATTCTTAAAATACTTCAGGGTAGGAAACGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: IHSINFFFVLSAGTA*CSPFLKYFRVGNAE Trigger: CTCAGCGTTTCCTACCCTGAAGTATTTTAAGAATGGCGAGCAGCAAGCGGTGCCTGCGCTCAGAACAAAGAAGAAGTTTATTGAGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGACTGCTGACACAGGTCTaGGTTCTTGTCCTTGACACA | + |
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Preference number: 5 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGLLTQV*VLVLDT Trigger: TGTGTCAAGGACAAGAACCAAGACCTGTGTCAGCAG...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CAA 90 bp | AGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGATCTTGGTTCTTGTCCTaGACACAGTCTACAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RKNKIGIIHSVKEGPLAGSWFLS*TQSTAA Trigger: TGCTGCTGTAGACTGTGTCAAGGACAAGAACCAAGA...TCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CAA 90 bp | ATTCAGAAAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCCACAGGTCTTGGTTCTaGTCCTTGACACAGTCTACA | + |
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Preference number: 5 (lower is better) Translates to: IQKEQNRYHSQCKGRAPCHRSWF*SLTQST Trigger: TGTAGACTGTGTCAAGGACAAGAACCAAGACCTGTG...GCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTTTCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS TCA 90 bp | CGCCGTCCTGGTAATGGAATAATTCAATCTTTTTGTCCTTTGGGCTaGGGTCAACTTTCATCTTCTTGCACAATTTTCTACTCTCTGCGT | + |
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Preference number: 5 (lower is better) Translates to: RRPGNGIIQSFCPLG*GQLSSSCTIFYSLR Trigger: ACGCAGAGAGTAGAAAATTGTGCAAGAAGATGAAAGTTGACCTCAGCCCAAAGGACAAAAAGATTGAATTATTCCATTACCAGGACGGCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS-3UTR CAA 90 bp | AAGAACAAAATAGGTATCATTCACAGTGTAAAGGAAGGGCCCCTTGCAGGAGGCAATAATTCAATCTTTTaGTCCTTTGGGCTGAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: KNKIGIIHSVKEGPLAGGNNSIF*SFGLRS Trigger: TGACCTCAGCCCAAAGGACAAAAAGATTGAATTATT...GCCTCCTGCAAGGGGCCCTTCCTTTACACTGTGAATGATACCTATTTTGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | TCTGCGTCACCGCAGTCCACCCAGCAGACGGTGCCTTaGCCTTTCACTGCCTGGGCCACGGTGGACAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SASPQSTQQTVP*PFTAWATVDRS Trigger: GCTCCTGTCCACCGTGGCCCAGGCAGTGAAAGGCCAAGGCACCGTCTGCTGGGTGGACTGCGGTGACGCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CAA 72 bp | CTCTGCGTCACCGCAGTCCACCCAGCAGACGGTGCCTaGGCCTTTCACTGCCTGGGCCACGGTGGACAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LCVTAVHPADGA*AFHCLGHGGQE Trigger: CTCCTGTCCACCGTGGCCCAGGCAGTGAAAGGCCAAGGCACCGTCTGCTGGGTGGACTGCGGTGACGCAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 72 bp | GCAGTCCACCCAGCAGACGGTGCCTTGGCCTTTCACTaGCTGGGCCACGGTGGACAGGAGCTTAAGATGACT | + |
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Preference number: 6 (lower is better) Translates to: AVHPADGALAFH*LGHGGQELKMT Trigger: AGTCATCTTAAGCTCCTGTCCACCGTGGCCCAGGCAGTGAAAGGCCAAGGCACCGTCTGCTGGGTGGACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 72 bp | TCCTGCCAGGGCCTCGTTGACGGTGGCATCGACAGCTaGAAGTACACCAGAGCTCTCAGCATCTCCGTGGAG | + |
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Preference number: 6 (lower is better) Translates to: SCQGLVDGGIDS*KYTRALSISVE Trigger: CTCCACGGAGATGCTGAGAGCTCTGGTGTACTTGCAGCTGTCGATGCCACCGTCAACGAGGCCCTGGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | CTCATCTGCCCAGGGAGTCTCGGGGACCTGGGGCTGTaGTGGCAGTGGATTCTTCAACCACTCCACGATGTC | + |
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Preference number: 6 (lower is better) Translates to: LICPGSLGDLGL*WQWILQPLHDV Trigger: GACATCGTGGAGTGGTTGAAGAATCCACTGCCACCACAGCCCCAGGTCCCCGAGACTCCCTGGGCAGATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | CCAGATGTAGCACGCTTGTCTGCTGTTCTTCCCACGTaGGCTCTGGAGGTGGGGGAGCCTCAGGGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PDVARLSAVLPT*ALEVGEPQGSA Trigger: TGCAGAACCCTGAGGCTCCCCCACCTCCAGAGCCCACGTGGGAAGAACAGCAGACAAGCGTGCTACATCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 72 bp | CGGAAGTTATCCCCCACCAGATGTAGCACGCTTGTCTaGTGTTCTTCCCACGTGGGCTCTGGAGGTGGGGGA | + |
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Preference number: 6 (lower is better) Translates to: RKLSPTRCSTLV*CSSHVGSGGGG Trigger: TCCCCCACCTCCAGAGCCCACGTGGGAAGAACAGCAGACAAGCGTGCTACATCTGGTGGGGGATAACTTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CAA 90 bp | TTTTCTACTCTCTGCGTCACCGCAGTCCACCCAGCAGACGGTGCCTaGGCCTTTCACTGCCTGGGCCACGGTGGACAGGAGCTTAAGATG | + |
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Preference number: 6 (lower is better) Translates to: FSTLCVTAVHPADGA*AFHCLGHGGQELKM Trigger: CATCTTAAGCTCCTGTCCACCGTGGCCCAGGCAGTGAAAGGCCAAGGCACCGTCTGCTGGGTGGACTGCGGTGACGCAGAGAGTAGAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CAA 90 bp | TCTTCAGGGTATCCCGGAAGTTATCCCCCACCAGATGTAGCACGCTaGTCTGCTGTTCTTCCCACGTGGGCTCTGGAGGTGGGGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSGYPGSYPPPDVAR*SAVLPTWALEVGEP Trigger: AGGCTCCCCCACCTCCAGAGCCCACGTGGGAAGAACAGCAGACAAGCGTGCTACATCTGGTGGGGGATAACTTCCGGGATACCCTGAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | GTGGCCTCGCACTTGGGTGGCAGCCTTCTGGAAATGTaGCATGATTCTCTTGCACATGCTGCACCAGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VASHLGGSLLEM*HDSLAHAAPGS Trigger: GCTCCCTGGTGCAGCATGTGCAAGAGAATCATGCCACATTTCCAGAAGGCTGCCACCCAAGTGCGAGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | CGGTCCTCTTTGAAGGCATCGGCTGTGGCAGTGAAGTaGGGGATGACCTTCTTACAGTGTGGGCACCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: RSSLKASAVAVK*GMTFLQCGHQG Trigger: CCCTTGGTGCCCACACTGTAAGAAGGTCATCCCCCACTTCACTGCCACAGCCGATGCCTTCAAAGAGGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS TCA 72 bp | ACGCTGAGATGTGAAATCTTCCTGCCAGGGCCTCGTTaGCGGTGGCATCGACAGCTGCAAGTACACCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: TLRCEIFLPGPR*RWHRQLQVHQS Trigger: GCTCTGGTGTACTTGCAGCTGTCGATGCCACCGTCAACGAGGCCCTGGCAGGAAGATTTCACATCTCAGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | TTTCTACGAGCTTCCCGTAGTGGTAGTAGTGGAAGGTaGGGTAGGCCTTCACGGCCTCCTGCTGACACAGGT | + |
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Preference number: 6 (lower is better) Translates to: FLRASRSGSSGR*GRPSRPPADTG Trigger: ACCTGTGTCAGCAGGAGGCCGTGAAGGCCTACCCCACCTTCCACTACTACCACTACGGGAAGCTCGTAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CAA 72 bp | CAGTCTACAGCAGCACAGGCAATCTTGCGGTCCTCTTaGAAGGCATCGGCTGTGGCAGTGAAGTGGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: QSTAAQAILRSS*KASAVAVKWGM Trigger: CATCCCCCACTTCACTGCCACAGCCGATGCCTTCAAAGAGGACCGCAAGATTGCCTGTGCTGCTGTAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CAA 90 bp | GTGGAAGGTGGGGTAGGCCTTCACGGCCTCCTGCTGACACAGGTCTaGGTTCTTGTCCTTGACACAGTCTACAGCAGCACAGGCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: VEGGVGLHGLLLTQV*VLVLDTVYSSTGNL Trigger: AAGATTGCCTGTGCTGCTGTAGACTGTGTCAAGGACAAGAACCAAGACCTGTGTCAGCAGGAGGCCGTGAAGGCCTACCCCACCTTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | ACGTTCATCCCAGCCAGGACAATGTGGCCTCGCACTTaGGTGGCAGCCTTCTGGAAATGTGGCATGATTCTC | + |
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Preference number: 6 (lower is better) Translates to: TFIPARTMWPRT*VAAFWKCGMIL Trigger: GAGAATCATGCCACATTTCCAGAAGGCTGCCACCCAAGTGCGAGGCCACATTGTCCTGGCTGGGATGAACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | GTGGATTCTTCAACCACTCCACGATGTCCTCGGCCGTaGACCCATAGTTCTCATACGGGAACAGAAACCGCC | + |
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Preference number: 6 (lower is better) Translates to: VDSSTTPRCPRP*THSSHTGTETA Trigger: GGCGGTTTCTGTTCCCGTATGAGAACTATGGGTCCACGGCCGAGGACATCGTGGAGTGGTTGAAGAATCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 72 bp | GGCCACGGTGGACAGGAGCTTAAGATGACTTTCAGCTaGTACCTCGGATTCCGAGTAAAGCACCAGCACGTT | + |
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Preference number: 6 (lower is better) Translates to: GHGGQELKMTFS*YLGFRVKHQHV Trigger: AACGTGCTGGTGCTTTACTCGGAATCCGAGGTAGCAGCTGAAAGTCATCTTAAGCTCCTGTCCACCGTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS GCA 72 bp | CACCATGGGGCGTGGAACATGACGAGGACAGAGGAGTaGTCCTTCACAAACTGGTCAAAGTCTTCATCGGTC | + |
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Preference number: 6 (lower is better) Translates to: HHGAWNMTRTEE*SFTNWSKSSSV Trigger: GACCGATGAAGACTTTGACCAGTTTGTGAAGGAGCACTCCTCTGTCCTCGTCATGTTCCACGCCCCATGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | ACAGCTGCAAGTACACCAGAGCTCTCAGCATCTCCGTaGAGGACTTCAGCAGCACTCTCAAACTCTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: TAASTPELSASP*RTSAALSNSGF Trigger: GAAGCCAGAGTTTGAGAGTGCTGCTGAAGTCCTCCACGGAGATGCTGAGAGCTCTGGTGTACTTGCAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CAA 90 bp | AGGAGTCGTCTGAAGTCCTTCTCACTGTCGATGTGCACAACATCTTaGGCTCCAGGATCTTCTTCCCACAGTGGGGGACCTTTAGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSRLKSFSLSMCTTS*APGSSSHSGGPLGS Trigger: AGACCCTAAAGGTCCCCCACTGTGGGAAGAAGATCCTGGAGCCAAAGATGTTGTGCACATCGACAGTGAGAAGGACTTCAGACGACTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS TCA 72 bp | TCTTGCACATGCTGCACCAGGGAGCATAGAACATCATaGGCAGTGGCTTCTCTTCTCTCTTCAGGAGTCGTC | + |
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Preference number: 6 (lower is better) Translates to: SCTCCTREHRTS*AVASLLSSGVV Trigger: GACGACTCCTGAAGAGAGAAGAGAAGCCACTGCTCATGATGTTCTATGCTCCCTGGTGCAGCATGTGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CCA 72 bp | CATGCTGCACCAGGGAGCATAGAACATCATGAGCAGTaGCTTCTCTTCTCTCTTCAGGAGTCGTCTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: HAAPGSIEHHEQ*LLFSLQESSEV Trigger: GACTTCAGACGACTCCTGAAGAGAGAAGAGAAGCCACTGCTCATGATGTTCTATGCTCCCTGGTGCAGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS TCA 72 bp | GCGGACATTGTACTCTTCCTTGATGTTCTCGAACTCTaGTGGGTAGACGTTCATCCCAGCCAGGACAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: ADIVLFLDVLEL*WVDVHPSQDNV Trigger: CACATTGTCCTGGCTGGGATGAACGTCTACCCATCAGAGTTCGAGAACATCAAGGAAGAGTACAATGTCCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CAA 90 bp | AATTCAATCTTTTTGTCCTTTGGGCTGAGGTCAACTTTCATCTTCTaGCACAATTTTCTACTCTCTGCGTCACCGCAGTCCACCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NSIFLSFGLRSTFIF*HNFLLSASPQSTQQ Trigger: CTGCTGGGTGGACTGCGGTGACGCAGAGAGTAGAAAATTGTGCAAGAAGATGAAAGTTGACCTCAGCCCAAAGGACAAAAAGATTGAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CAA 72 bp | TTTTTGTCCTTTGGGCTGAGGTCAACTTTCATCTTCTaGCACAATTTTCTACTCTCTGCGTCACCGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: FLSFGLRSTFIF*HNFLLSASPQS Trigger: GGACTGCGGTGACGCAGAGAGTAGAAAATTGTGCAAGAAGATGAAAGTTGACCTCAGCCCAAAGGACAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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| CDS CAA 72 bp | AATAAACTTCTTCTTTGTTCTGAGCGCAGGCACCGCTaGCTGCTCGCCATTCTTAAAATACTTCAGGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: NKLLLCSERRHR*LLAILKILQGR Trigger: CCTACCCTGAAGTATTTTAAGAATGGCGAGCAGCAAGCGGTGCCTGCGCTCAGAACAAAGAAGAAGTTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023550.9 |
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