Pregenerated sensors for PDIA4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025823Ensembl transcript IDs: ENSMUST00000077290.9
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAAGATCCTGCCATTTCACTGATGGCTCACATGCTTGGTGGCCAATaGTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: QDPAISLMAHMLGGQ*CPLVPGASTFCTQP Trigger: TGGCTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTGAGCCATCAGTGAAATGGCAGGATCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| 3UTR CCA 90 bp | AAAAAGTCAAGATCCTGCCATTTCACTGATGGCTCACATGCTTGGTaGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCAC | + |
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Preference number: 1 (lower is better) Translates to: KKSRSCHFTDGSHAW*PMLSTSAWCLHLLH Trigger: GTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTGAGCCATCAGTGAAATGGCAGGATCTTGACTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| 3UTR GCA 72 bp | GCCATTTCACTGATGGCTCACATGCTTGGTGGCCAATaGTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGC | + |
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Preference number: 3 (lower is better) Translates to: AISLMAHMLGGQ*CPLVPGASTFC Trigger: GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTGAGCCATCAGTGAAATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCGGGGAGAGCGCTTGCTaGGCTCCTTGGCAGCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: HMLGGQCCPLVPGASTFCGESAC*APWQLS Trigger: AGAAAGCTGCCAAGGAGCTCAGCAAGCGCTCTCCCC...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | CTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGCCTCTCCACTCTCACTaGGCCCCAGGTCCTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: LGGQCCPLVPGASTFCTQPLHSH*APGPSP Trigger: AGGTGAAGGACCTGGGGCTCAGTGAGAGTGGAGAGG...CTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | CTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGCATCCATCTTGGCGATaGCCAGGTCCTTCTGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LGGQCCPLVPGASTFCTQHPSWR*PGPSGP Trigger: AGGGCCAGAAGGACCTGGTCATCGCCAAGATGGATG...CTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCTCCTTCAGGAACTCCTaGACCTGCTTCAGGGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: HMLGGQCCPLVPGASTFCSFRNS*TCFRVR Trigger: CCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGA...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCGGTCCTTCACCTCCGTaGCATAGTCTTCCTCGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HMLGGQCCPLVPGASTFCGPSPP*HSLPRQ Trigger: CTGACGAGGAAGACTATGCCACGGAGGTGAAGGACC...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | CTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGCCTTCTTCAGGATCTTaGTGGTGGGGTAGCCACTCA | + |
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Preference number: 4 (lower is better) Translates to: LGGQCCPLVPGASTFCTQPSSGS*WWGSHS Trigger: TGAGTGGCTACCCCACCATCAAGATCCTGAAGAAGG...CTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | CTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGGCTTCTGTAGAGCCCTaGACATCCATCACGTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LGGQCCPLVPGASTFCTQASVEP*TSITWN Trigger: GTTCCACGTGATGGATGTTCAGGGCTCTACAGAAGC...CTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCATAGTCCTTAATGGCTaGTGCTTCTGTAGAGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMLGGQCCPLVPGASTFCIVLNG*CFCRAL Trigger: CAGGGCTCTACAGAAGCATCAGCCATTAAGGACTAT...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | CTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGATTTGCTGGCTAGCATaGATGCTGAGGTTGCATCGA | + |
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Preference number: 4 (lower is better) Translates to: LGGQCCPLVPGASTFCTQICWLA*MLRLHR Trigger: TCGATGCAACCTCAGCATCCATGCTAGCCAGCAAAT...CTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | CTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGCCCTCCACCTTATATTaGTCGTTGGTGATGTCGTTG | + |
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Preference number: 4 (lower is better) Translates to: LGGQCCPLVPGASTFCTQPSTLY*SLVMSL Trigger: CAACGACATCACCAACGACCAATATAAGGTGGAGGG...CTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR GCA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCCACTCACATCAAATTTaGTGGCTAGCATGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: HMLGGQCCPLVPGASTFCHSHQI*WLAWML Trigger: CAGCATCCATGCTAGCCAGCAAATTTGATGTGAGTG...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCCTCTGTAATCAAAGCTaGAGTCCACACTGTAGTATA | + |
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Preference number: 4 (lower is better) Translates to: HMLGGQCCPLVPGASTFCLCNQS*SPHCSI Trigger: TATACTACAGTGTGGACTTCAGCTTTGATTACAGAG...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR GCA 90 bp | CTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGATAAACTTGCTCAAATaGTCCAGATCTCTGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: LGGQCCPLVPGASTFCTQINLLK*SRSLLP Trigger: TGGCAACAGAGATCTGGAGCATTTGAGCAAGTTTAT...CTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATGGTCAGGATCTCCTTTaGGGGAGGCCCAGACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KSLVAIQYSEHEVALTKYGQDLL*GRPRLL Trigger: GAGCAGTCTGGGCCTCCCTCAAAGGAGATCCTGACC...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAGGGTCACCATCTCCCTaGAAGAGCCCAATGATGACC | + |
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Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKGSPSP*KSPMMT Trigger: GGTCATCATTGGGCTCTTTCAGGGAGATGGTGACCC...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATCCATCACGTGGAACCTaGGCTCATACTTGGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: KSLVAIQYSEHEVALTKYPSRGT*AHTWTG Trigger: TCCAGTCCAAGTATGAGCCCAGGTTCCACGTGATGG...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAATTCCCGGAGAGTGTCTaGATCAAACTCCTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKFPESV*IKLLWL Trigger: GAGCCAGAGGAGTTTGATTCAGACACTCTCCGGGAA...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAATTCCCACCACCACCTTaGCTGGTCCCTTGTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKFPPPP*LVPCCS Trigger: AGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAA...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATACCTGGGCTCATACTTaGACTGGAACTTCTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: KSLVAIQYSEHEVALTKYTWAHT*TGTSQG Trigger: ACCCTGAGAAGTTCCAGTCCAAGTATGAGCCCAGGT...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAGGCTCATACTTGGACTaGAACTTCTCAGGGTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKGSYLD*NFSGCV Trigger: GACACACCCTGAGAAGTTCCAGTCCAAGTATGAGCC...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAACTCAGGGAAGTCCTTaGCCACCTCTAGGACTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKTQGSP*PPLGLC Trigger: ACAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGT...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATCCTCTTCCTCCTCAGTaGCATTTTCTGTATCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: KSLVAIQYSEHEVALTKYPLPPQ*HFLYLK Trigger: CTTCAGATACAGAAAATGCCACTGAGGAGGAAGAGG...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAGGTGTCCAATCAGGCTaGGAAACTTCTCTGACTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKGVQSG*ETSLTL Trigger: CAAAGTCAGAGAAGTTTCCCAGCCTGATTGGACACC...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAATGACCAGGTCCTTCTaGCCCTTGTATTTCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKMTRSF*PLYFLP Trigger: AGGCAAGAAATACAAGGGCCAGAAGGACCTGGTCAT...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATGGCATTTTCTGTATCTaGAGTATCTTCGTGTGCATC | + |
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Preference number: 4 (lower is better) Translates to: KSLVAIQYSEHEVALTKYGIFCI*SIFVCI Trigger: GATGCACACGAAGATACTTCAGATACAGAAAATGCC...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATGCTGGGAAACTTCTCTaGCTTTGGCAACAATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: KSLVAIQYSEHEVALTKYAGKLL*LWQQFL Trigger: AAGAAATTGTTGCCAAAGTCAGAGAAGTTTCCCAGC...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAATGGCTATTTCAGGGCTaGAAGTGTGGTGAAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKWLFQG*KCGETC Trigger: ACAAGTTTCACCACACTTTCAGCCCTGAAATAGCCA...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATTCTTCGCTACAGCAATaGGAGGATCATTATCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KSLVAIQYSEHEVALTKYSSLQQ*EDHYPS Trigger: TGAAGGATAATGATCCTCCCATTGCTGTAGCGAAGA...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAATCACATCAAATTTGCTaGCTAGCATGGATGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKSHQIC*LAWMLR Trigger: CCTCAGCATCCATGCTAGCCAGCAAATTTGATGTGA...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR TCA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAGTTATCTTTAGTCAATaGAAGAGTGACTTCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLVAIQYSEHEVALTKYKVIFSQ*KSDFRW Trigger: CCACCTGAAGTCACTCTTTCATTGACTAAAGATAAC...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CCA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATACCCTCAAATTTAATTaGGTTCTTTTTGTCCCCACT | + |
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Preference number: 4 (lower is better) Translates to: KSLVAIQYSEHEVALTKYTLKFN*VLFVPT Trigger: AGTGGGGACAAAAAGAACCCAATTAAATTTGAGGGT...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCGGGTCAGGATCTCCTTaGAGGGAGGCCCAGACTGCT | + |
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Preference number: 5 (lower is better) Translates to: HMLGGQCCPLVPGASTFCGSGSP*REAQTA Trigger: AGCAGTCTGGGCCTCCCTCAAAGGAGATCCTGACCC...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACCACCAGGGGGCGTTaGCTGTACCGCTTAGCATCA | + |
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Preference number: 5 (lower is better) Translates to: HMLGGQCCPLVPGASTFCTTRGR*LYRLAS Trigger: TGATGCTAAGCGGTACAGCAAACGCCCCCTGGTGGT...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCGCAGTAGCATCCATCTaGGCGATGACCAGGTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: HMLGGQCCPLVPGASTFCAVASI*AMTRSF Trigger: GAAGGACCTGGTCATCGCCAAGATGGATGCTACTGC...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS TCA 90 bp | CGGTGGCGTCCACTTTGGCTAAGGGAATTGGGGGAGAGCGCTTGCTaGGCTCCTTGGCAGCTTTCTCATACTCAGGGGCAAGTTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: RWRPLWLRELGESAC*APWQLSHTQGQVSC Trigger: GCAAGAAACTTGCCCCTGAGTATGAGAAAGCTGCCAAGGAGCTCAGCAAGCGCTCTCCCCCAATTCCCTTAGCCAAAGTGGACGCCACCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 90 bp | GCCCCAGGTCCTTCACCTCCGTGGCATAGTCTTCCTCGTCAGCAATaGCGAAGGTATACTCAGGGAAGTCCTTGGCCACCTCTAGGACTT | + |
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Preference number: 5 (lower is better) Translates to: APGPSPPWHSLPRQQ*RRYTQGSPWPPLGL Trigger: AAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTATACCTTCGCCATTGCTGACGAGGAAGACTATGCCACGGAGGTGAAGGACCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCGCATGGATGCTGAGGTaGCATCGATCTTCGCTACAG | + |
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Preference number: 5 (lower is better) Translates to: HMLGGQCCPLVPGASTFCAWMLR*HRSSLQ Trigger: CTGTAGCGAAGATCGATGCAACCTCAGCATCCATGC...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | CTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGTACTCAGGGAAGTCCTaGGCCACCTCTAGGACTTTG | + |
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Preference number: 5 (lower is better) Translates to: LGGQCCPLVPGASTFCTQYSGKS*ATSRTL Trigger: CAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTA...CTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACCTTGACTGGTCCCTaGTTGTTCTTGGGTACTGGC | + |
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Preference number: 5 (lower is better) Translates to: HMLGGQCCPLVPGASTFCTLTGP*LFLGTG Trigger: GCCAGTACCCAAGAACAACAAGGGACCAGTCAAGGT...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | CTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCACACAGAGGTCCTTCTGGCCCTaGTATTTCTTGCCTAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LGGQCCPLVPGASTFCTQRSFWP*YFLPRL Trigger: CAGCCTAGGCAAGAAATACAAGGGCCAGAAGGACCT...CTGTGTGCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | CACATGCTTGGTGGCCAATGCTGTCCACTAGTGCCTGGTGCCTCCACCTTCTGCGGTCCCTTGTTGTTCTaGGGTACTGGCTGTGATTTG | + |
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Preference number: 5 (lower is better) Translates to: HMLGGQCCPLVPGASTFCGPLLF*GTGCDL Trigger: CAAATCACAGCCAGTACCCAAGAACAACAAGGGACC...GCAGAAGGTGGAGGCACCAGGCACTAGTGGACAGCATTGGCCACCAAGCATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS GCA 90 bp | CCAATGATGACCACATCATCTCCATCCTTCAGGAACTCCTGGACCTaGTTCAGGGTCAGGATCTCCTTTGAGGGAGGCCCAGACTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PMMTTSSPSFRNSWT*FRVRISFEGGPDCS Trigger: TGAGCAGTCTGGGCCTCCCTCAAAGGAGATCCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGATGGAGATGATGTGGTCATCATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 90 bp | AAGAGCCCAATGATGACCACATCATCTCCATCCTTCAGGAACTCCTaGACCTGCTTCAGGGTCAGGATCTCCTTTGAGGGAGGCCCAGAC | + |
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Preference number: 5 (lower is better) Translates to: KSPMMTTSSPSFRNS*TCFRVRISFEGGPD Trigger: GTCTGGGCCTCCCTCAAAGGAGATCCTGACCCTGAAGCAGGTCCAGGAGTTCCTGAAGGATGGAGATGATGTGGTCATCATTGGGCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS TCA 90 bp | TCCTGGAGCCATCATAGTCAACGGCCTGTCCCTTCTTCAGGATCTTaGTGGTGGGGTAGCCACTCACATCAAATTTGCTGGCTAGCATGG | + |
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Preference number: 5 (lower is better) Translates to: SWSHHSQRPVPSSGS*WWGSHSHQICWLAW Trigger: CCATGCTAGCCAGCAAATTTGATGTGAGTGGCTACCCCACCATCAAGATCCTGAAGAAGGGACAGGCCGTTGACTATGATGGCTCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS TCA 90 bp | GCTCTAGCTGCTTGCAGTGCCCACACCAGGGTGCATAGAATTCAATaGGGACGTCCTTTTTGGGGTCCATCACAATGGCATCAAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: ALAACSAHTRVHRIQ*GRPFWGPSQWHQRS Trigger: AGACCTTTGATGCCATTGTGATGGACCCCAAAAAGGACGTCCTCATTGAATTCTATGCACCCTGGTGTGGGCACTGCAAGCAGCTAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 90 bp | CCAAGTCATCGTCATCCTCTTCCTCTTCCTCCTCTTCCTCCTCAGTaGCATTTTCTGTATCTGAAGTATCTTCGTGTGCATCTCCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: PSHRHPLPLPPLPPQ*HFLYLKYLRVHLRR Trigger: GCGCCGGAGATGCACACGAAGATACTTCAGATACAGAAAATGCCACTGAGGAGGAAGAGGAGGAAGAGGAAGAGGATGACGATGACTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 90 bp | TTAGTCAATGAAAGAGTGACTTCAGGTGGAGGTGTCCAATCAGGCTaGGAAACTTCTCTGACTTTGGCAACAATTTCTTCCTGGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LVNERVTSGGGVQSG*ETSLTLATISSWVL Trigger: CAGGACCCAGGAAGAAATTGTTGCCAAAGTCAGAGAAGTTTCCCAGCCTGATTGGACACCTCCACCTGAAGTCACTCTTTCATTGACTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAATTGGGGGAGAGCGCTaGCTGAGCTCCTTGGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: SLVAIQYSEHEVALTKYKIGGER*LSSLAA Trigger: AGCTGCCAAGGAGCTCAGCAAGCGCTCTCCCCCAAT...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 90 bp | TGGCTAGCATGGATGCTGAGGTTGCATCGATCTTCGCTACAGCAATaGGAGGATCATTATCCTTCAAAGTACTGGCAATTTTCTCATATT | + |
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Preference number: 5 (lower is better) Translates to: WLAWMLRLHRSSLQQ*EDHYPSKYWQFSHI Trigger: AATATGAGAAAATTGCCAGTACTTTGAAGGATAATGATCCTCCCATTGCTGTAGCGAAGATCGATGCAACCTCAGCATCCATGCTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAATTTCCCACCACCACCTaGACTGGTCCCTTGTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SLVAIQYSEHEVALTKYKFPTTT*TGPLLF Trigger: GAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAA...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATGCCCTCCACCTTATATaGGTCGTTGGTGATGTCGTT | + |
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Preference number: 5 (lower is better) Translates to: KSLVAIQYSEHEVALTKYALHLI*VVGDVV Trigger: AACGACATCACCAACGACCAATATAAGGTGGAGGGC...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS GCA 90 bp | GTCCTGCTCCTCTTTGTGGCATGTTCATCTATAAACTTGCTCAAATaGTCCAGATCTCTGTTGCCACCCTCAAATTTAATTGGGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: VLLLFVACSSINLLK*SRSLLPPSNLIGFF Trigger: AAAGAACCCAATTAAATTTGAGGGTGGCAACAGAGATCTGGAGCATTTGAGCAAGTTTATAGATGAACATGCCACAAAGAGGAGCAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAATGAGGACGTCCTTTTaGGGGTCCATCACAATGGCA | + |
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Preference number: 5 (lower is better) Translates to: SLVAIQYSEHEVALTKYKMRTSF*GSITMA Trigger: TGCCATTGTGATGGACCCCAAAAAGGACGTCCTCAT...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAACCACTCACATCAAATTaGCTGGCTAGCATGGATGCT | + |
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Preference number: 5 (lower is better) Translates to: SLVAIQYSEHEVALTKYKPLTSN*LASMDA Trigger: AGCATCCATGCTAGCCAGCAAATTTGATGTGAGTGG...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS TCA 90 bp | AATGTCTGCATTATTTACAACATCGTCAAAGTTATCTTTAGTCAATaGAAGAGTGACTTCAGGTGGAGGTGTCCAATCAGGCTGGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: NVCIIYNIVKVIFSQ*KSDFRWRCPIRLGN Trigger: GTTTCCCAGCCTGATTGGACACCTCCACCTGAAGTCACTCTTTCATTGACTAAAGATAACTTTGACGATGTTGTAAATAATGCAGACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAGAGACTTTCAGGAACTaGGCTATTTCAGGGCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SLVAIQYSEHEVALTKYKETFRN*AISGLK Trigger: TTTCAGCCCTGAAATAGCCAAGTTCCTGAAAGTCTC...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAAACCTTATATTGGTCGTaGGTGATGTCGTTGGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLVAIQYSEHEVALTKYKTLYWS*VMSLAV Trigger: TACTGCCAACGACATCACCAACGACCAATATAAGGT...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | AAGTCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAGTAGCACTGTATCTTaGTCAGCCACAAAGTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: KSLVAIQYSEHEVALTKYSSTVS*SATKLS Trigger: TGATAACTTTGTGGCTGACAAAGATACAGTGCTACT...ATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS-3UTR CAA 90 bp | TCACTCGTGGCTATTCAGTATTCAGAGCATGAGGTGGCATTAACAAAATATAAATGTTCATCTATAAACTaGCTCAAATGCTCCAGATCT | + |
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Preference number: 5 (lower is better) Translates to: SLVAIQYSEHEVALTKYKCSSIN*LKCSRS Trigger: AGATCTGGAGCATTTGAGCAAGTTTATAGATGAACA...TTTATATTTTGTTAATGCCACCTCATGCTCTGAATACTGAATAGCCACGAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 90 bp | TGTTCGGTGGCGTCCACTTTGGCTAAGGGAATTGGGGGAGAGCGCTaGCTGAGCTCCTTGGCAGCTTTCTCATACTCAGGGGCAAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: CSVASTLAKGIGGER*LSSLAAFSYSGASF Trigger: GAAACTTGCCCCTGAGTATGAGAAAGCTGCCAAGGAGCTCAGCAAGCGCTCTCCCCCAATTCCCTTAGCCAAAGTGGACGCCACCGAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 72 bp | CCTTCACCTCCGTGGCATAGTCTTCCTCGTCAGCAATaGCGAAGGTATACTCAGGGAAGTCCTTGGCCACCT | + |
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Preference number: 6 (lower is better) Translates to: PSPPWHSLPRQQ*RRYTQGSPWPP Trigger: AGGTGGCCAAGGACTTCCCTGAGTATACCTTCGCCATTGCTGACGAGGAAGACTATGCCACGGAGGTGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 72 bp | ACATCCATCACGTGGAACCTGGGCTCATACTTGGACTaGAACTTCTCAGGGTGTGTCAGCACCAACTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: TSITWNLGSYLD*NFSGCVSTNFP Trigger: GGGGAAGTTGGTGCTGACACACCCTGAGAAGTTCCAGTCCAAGTATGAGCCCAGGTTCCACGTGATGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 72 bp | GCTAAGGGAATTGGGGGAGAGCGCTTGCTGAGCTCCTaGGCAGCTTTCTCATACTCAGGGGCAAGTTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: AKGIGGERLLSS*AAFSYSGASFL Trigger: CAAGAAACTTGCCCCTGAGTATGAGAAAGCTGCCAAGGAGCTCAGCAAGCGCTCTCCCCCAATTCCCTTAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 72 bp | CCTGAACATCCATCACGTGGAACCTGGGCTCATACTTaGACTGGAACTTCTCAGGGTGTGTCAGCACCAACT | + |
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Preference number: 6 (lower is better) Translates to: PEHPSRGTWAHT*TGTSQGVSAPT Trigger: AGTTGGTGCTGACACACCCTGAGAAGTTCCAGTCCAAGTATGAGCCCAGGTTCCACGTGATGGATGTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 72 bp | CGTCAGCAATGGCGAAGGTATACTCAGGGAAGTCCTTaGCCACCTCTAGGACTTTGTTACGCCAAAACTGAG | + |
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Preference number: 6 (lower is better) Translates to: RQQWRRYTQGSP*PPLGLCYAKTE Trigger: CTCAGTTTTGGCGTAACAAAGTCCTAGAGGTGGCCAAGGACTTCCCTGAGTATACCTTCGCCATTGCTGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 72 bp | AAGGTCTTTCCCACCACCACCTTGACTGGTCCCTTGTaGTTCTTGGGTACTGGCTGTGATTTGATGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: KVFPTTTLTGPL*FLGTGCDLMTG Trigger: GCCAGTCATCAAATCACAGCCAGTACCCAAGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAAGACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 90 bp | TTGGGGTCCATCACAATGGCATCAAAGGTCTTTCCCACCACCACCTaGACTGGTCCCTTGTTGTTCTTGGGTACTGGCTGTGATTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LGSITMASKVFPTTT*TGPLLFLGTGCDLM Trigger: CATCAAATCACAGCCAGTACCCAAGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAAGACCTTTGATGCCATTGTGATGGACCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS TCA 72 bp | CATCATAGTCAACGGCCTGTCCCTTCTTCAGGATCTTaGTGGTGGGGTAGCCACTCACATCAAATTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: HHSQRPVPSSGS*WWGSHSHQICW Trigger: CCAGCAAATTTGATGTGAGTGGCTACCCCACCATCAAGATCCTGAAGAAGGGACAGGCCGTTGACTATGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 72 bp | TGGGGTAGCCACTCACATCAAATTTGCTGGCTAGCATaGATGCTGAGGTTGCATCGATCTTCGCTACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: WGSHSHQICWLA*MLRLHRSSLQQ Trigger: TTGCTGTAGCGAAGATCGATGCAACCTCAGCATCCATGCTAGCCAGCAAATTTGATGTGAGTGGCTACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 72 bp | ATCACAATGGCATCAAAGGTCTTTCCCACCACCACCTaGACTGGTCCCTTGTTGTTCTTGGGTACTGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ITMASKVFPTTT*TGPLLFLGTGC Trigger: ACAGCCAGTACCCAAGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAAGACCTTTGATGCCATTGTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS TCA 72 bp | GGGCAAGGCATGTTTCACTACATAGTCCTTAATGGCTaGTGCTTCTGTAGAGCCCTGAACATCCATCACGTG | + |
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Preference number: 6 (lower is better) Translates to: GQGMFHYIVLNG*CFCRALNIHHV Trigger: CACGTGATGGATGTTCAGGGCTCTACAGAAGCATCAGCCATTAAGGACTATGTAGTGAAACATGCCTTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 72 bp | TTTCCCACCACCACCTTGACTGGTCCCTTGTTGTTCTaGGGTACTGGCTGTGATTTGATGACTGGCTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: FPTTTLTGPLLF*GTGCDLMTGFS Trigger: ACTAAAGCCAGTCATCAAATCACAGCCAGTACCCAAGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 72 bp | TCAAAGGTCTTTCCCACCACCACCTTGACTGGTCCCTaGTTGTTCTTGGGTACTGGCTGTGATTTGATGACT | + |
|
Preference number: 6 (lower is better) Translates to: SKVFPTTTLTGP*LFLGTGCDLMT Trigger: AGTCATCAAATCACAGCCAGTACCCAAGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAAGACCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 90 bp | GGTAGCCACTCACATCAAATTTGCTGGCTAGCATGGATGCTGAGGTaGCATCGATCTTCGCTACAGCAATGGGAGGATCATTATCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSHSHQICWLAWMLR*HRSSLQQWEDHYPS Trigger: TGAAGGATAATGATCCTCCCATTGCTGTAGCGAAGATCGATGCAACCTCAGCATCCATGCTAGCCAGCAAATTTGATGTGAGTGGCTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 90 bp | ACAATGGCATCAAAGGTCTTTCCCACCACCACCTTGACTGGTCCCTaGTTGTTCTTGGGTACTGGCTGTGATTTGATGACTGGCTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: TMASKVFPTTTLTGP*LFLGTGCDLMTGFS Trigger: ACTAAAGCCAGTCATCAAATCACAGCCAGTACCCAAGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAAGACCTTTGATGCCATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 90 bp | ATGGCATCAAAGGTCTTTCCCACCACCACCTTGACTGGTCCCTTGTaGTTCTTGGGTACTGGCTGTGATTTGATGACTGGCTTTAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: MASKVFPTTTLTGPL*FLGTGCDLMTGFSF Trigger: AAAACTAAAGCCAGTCATCAAATCACAGCCAGTACCCAAGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAAGACCTTTGATGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 72 bp | CGTCATCCTCTTCCTCTTCCTCCTCTTCCTCCTCAGTaGCATTTTCTGTATCTGAAGTATCTTCGTGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RHPLPLPPLPPQ*HFLYLKYLRVH Trigger: ATGCACACGAAGATACTTCAGATACAGAAAATGCCACTGAGGAGGAAGAGGAGGAAGAGGAAGAGGATGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 72 bp | GAAAGAGTGACTTCAGGTGGAGGTGTCCAATCAGGCTaGGAAACTTCTCTGACTTTGGCAACAATTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ERVTSGGGVQSG*ETSLTLATISS Trigger: GGAAGAAATTGTTGCCAAAGTCAGAGAAGTTTCCCAGCCTGATTGGACACCTCCACCTGAAGTCACTCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 72 bp | TCACATCAAATTTGCTGGCTAGCATGGATGCTGAGGTaGCATCGATCTTCGCTACAGCAATGGGAGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: SHQICWLAWMLR*HRSSLQQWEDH Trigger: ATGATCCTCCCATTGCTGTAGCGAAGATCGATGCAACCTCAGCATCCATGCTAGCCAGCAAATTTGATGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 72 bp | AGCAAAATAGATGGTAGGGAAGCCCTCCACCTTATATaGGTCGTTGGTGATGTCGTTGGCAGTAGCATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SKIDGREALHLI*VVGDVVGSSIH Trigger: ATGGATGCTACTGCCAACGACATCACCAACGACCAATATAAGGTGGAGGGCTTCCCTACCATCTATTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 72 bp | GTCCTGCTCCTCTTTGTGGCATGTTCATCTATAAACTaGCTCAAATGCTCCAGATCTCTGTTGCCACCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VLLLFVACSSIN*LKCSRSLLPPS Trigger: TGAGGGTGGCAACAGAGATCTGGAGCATTTGAGCAAGTTTATAGATGAACATGCCACAAAGAGGAGCAGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 90 bp | TCAAAGGTCTTTCCCACCACCACCTTGACTGGTCCCTTGTTGTTCTaGGGTACTGGCTGTGATTTGATGACTGGCTTTAGTTTTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SKVFPTTTLTGPLLF*GTGCDLMTGFSFPF Trigger: AAAAGGAAAACTAAAGCCAGTCATCAAATCACAGCCAGTACCCAAGAACAACAAGGGACCAGTCAAGGTGGTGGTGGGAAAGACCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS TCA 72 bp | CCAGGGAGACTTTCAGGAACTTGGCTATTTCAGGGCTaGAAGTGTGGTGAAACTTGTAATCTTCTCTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGRLSGTWLFQG*KCGETCNLLSG Trigger: ACCTGAGAGAAGATTACAAGTTTCACCACACTTTCAGCCCTGAAATAGCCAAGTTCCTGAAAGTCTCCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CCA 72 bp | TGGATGCTGAGGTTGCATCGATCTTCGCTACAGCAATaGGAGGATCATTATCCTTCAAAGTACTGGCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: WMLRLHRSSLQQ*EDHYPSKYWQF Trigger: AAATTGCCAGTACTTTGAAGGATAATGATCCTCCCATTGCTGTAGCGAAGATCGATGCAACCTCAGCATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 90 bp | GTGGCATGTTCATCTATAAACTTGCTCAAATGCTCCAGATCTCTGTaGCCACCCTCAAATTTAATTGGGTTCTTTTTGTCCCCACTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VACSSINLLKCSRSL*PPSNLIGFFLSPLG Trigger: TCCCAGTGGGGACAAAAAGAACCCAATTAAATTTGAGGGTGGCAACAGAGATCTGGAGCATTTGAGCAAGTTTATAGATGAACATGCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS CAA 90 bp | TCTTCCTTGGTCCTGCTCCTCTTTGTGGCATGTTCATCTATAAACTaGCTCAAATGCTCCAGATCTCTGTTGCCACCCTCAAATTTAATT | + |
|
Preference number: 6 (lower is better) Translates to: SSLVLLLFVACSSIN*LKCSRSLLPPSNLI Trigger: AATTAAATTTGAGGGTGGCAACAGAGATCTGGAGCATTTGAGCAAGTTTATAGATGAACATGCCACAAAGAGGAGCAGGACCAAGGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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| CDS TCA 72 bp | ATTATTTACAACATCGTCAAAGTTATCTTTAGTCAATaGAAGAGTGACTTCAGGTGGAGGTGTCCAATCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IIYNIVKVIFSQ*KSDFRWRCPIR Trigger: CCTGATTGGACACCTCCACCTGAAGTCACTCTTTCATTGACTAAAGATAACTTTGACGATGTTGTAAATAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077290.9 |
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