Pregenerated sensors for PDIA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027248Ensembl transcript IDs: ENSMUST00000028683.14
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTCACACAGGGCATTTCTGGGCAGAGAACCATCCTCAGGAGGCATaGACATGCAGAAAGCTTGGCTGTGTGGCAAGAGTAAGCATTCAC | + |
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Preference number: 1 (lower is better) Translates to: THTGHFWAENHPQEA*TCRKLGCVARVSIH Trigger: GTGAATGCTTACTCTTGCCACACAGCCAAGCTTTCTGCATGTGCATGCCTCCTGAGGATGGTTCTCTGCCCAGAAATGCCCTGTGTGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR CCA 90 bp | AATTGGATGGAACCCCAAACTGCTGTCACTCACACAGGGCATTTCTaGGCAGAGAACCATCCTCAGGAGGCATGCACATGCAGAAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: NWMEPQTAVTHTGHF*AENHPQEACTCRKL Trigger: AAGCTTTCTGCATGTGCATGCCTCCTGAGGATGGTTCTCTGCCCAGAAATGCCCTGTGTGAGTGACAGCAGTTTGGGGTTCCATCCAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR CCA 90 bp | TGCCAGCGATTGATACTGTTTCCCTGTTCACTGGAGGGAAGTAAATaGCTACACCCAATGATTTGGGGAGAGCTGCACCCAGCAGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: CQRLILFPCSLEGSK*LHPMIWGELHPAVS Trigger: TGAAACTGCTGGGTGCAGCTCTCCCCAAATCATTGGGTGTAGCCATTTACTTCCCTCCAGTGAACAGGGAAACAGTATCAATCGCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR CCA 90 bp | TTTCCCTGTTCACTGGAGGGAAGTAAATGGCTACACCCAATGATTTaGGGAGAGCTGCACCCAGCAGTTTCAATAATTCCTAAAATTGGA | + |
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Preference number: 1 (lower is better) Translates to: FPCSLEGSKWLHPMI*GELHPAVSIIPKIG Trigger: TCCAATTTTAGGAATTATTGAAACTGCTGGGTGCAGCTCTCCCCAAATCATTGGGTGTAGCCATTTACTTCCCTCCAGTGAACAGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR GCA 90 bp | AAAACCTGCTATGTAGCCATGGAAGATCTTGAACTTGAGATCTCTTaGCTGCACCTCCCAAGTGTTGCGATTATAGGAGATAACATATCT | + |
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Preference number: 1 (lower is better) Translates to: KTCYVAMEDLELEIS*LHLPSVAIIGDNIS Trigger: AGATATGTTATCTCCTATAATCGCAACACTTGGGAGGTGCAGGCAAGAGATCTCAAGTTCAAGATCTTCCATGGCTACATAGCAGGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR-3UTR GCA 90 bp | TGGCTACACCCAATGATTTGGGGAGAGCTGCACCCAGCAGTTTCAATAATTCCTCAGGAGGCATGCACATaGAGAAAGCTTGGCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: WLHPMIWGELHPAVSIIPQEACT*RKLGCV Trigger: CACACAGCCAAGCTTTCTGCATGTGCATGCCTCCTG...AGGAATTATTGAAACTGCTGGGTGCAGCTCTCCCCAAATCATTGGGTGTAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR-3UTR CCA 90 bp | TGGCTACACCCAATGATTTGGGGAGAGCTGCACCCAGCAGTTTCAATAATTCCTCACACAGGGCATTTCTaGGCAGAGAACCATCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: WLHPMIWGELHPAVSIIPHTGHF*AENHPQ Trigger: CTGAGGATGGTTCTCTGCCCAGAAATGCCCTGTGTG...AGGAATTATTGAAACTGCTGGGTGCAGCTCTCCCCAAATCATTGGGTGTAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR-3UTR GCA 90 bp | CTACACCCAATGATTTGGGGAGAGCTGCACCCAGCAGTTTCAATAATTCCTAAACATCCTCAGGAGGCATaGACATGCAGAAAGCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LHPMIWGELHPAVSIIPKHPQEA*TCRKLG Trigger: GCCAAGCTTTCTGCATGTGCATGCCTCCTGAGGATG...TTTAGGAATTATTGAAACTGCTGGGTGCAGCTCTCCCCAAATCATTGGGTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR-3UTR TCA 90 bp | TGGCTACACCCAATGATTTGGGGAGAGCTGCACCCAGCAGTTTCAATAATTCCTTTCACCTTTAGGACATaGATGAGGCTAGAAACAACT | + |
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Preference number: 2 (lower is better) Translates to: WLHPMIWGELHPAVSIIPFTFRT*MRLETT Trigger: AGTTGTTTCTAGCCTCATTCATGTCCTAAAGGTGAA...AGGAATTATTGAAACTGCTGGGTGCAGCTCTCCCCAAATCATTGGGTGTAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR-3UTR GCA 90 bp | CTACACCCAATGATTTGGGGAGAGCTGCACCCAGCAGTTTCAATAATTCCTAAATGTCCTCTCTGGTTTTaGCTTCTCTGGTGTAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: LHPMIWGELHPAVSIIPKCPLWF*LLWCKS Trigger: ACTCTTACACCAGAGAAGGCAAAACCAGAGAGGACA...TTTAGGAATTATTGAAACTGCTGGGTGCAGCTCTCCCCAAATCATTGGGTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR CAA 90 bp | CAAGGACAGCTTGAGCTACAGAAAGAAACTAATAAATTATACAATTaGGAGATGGTAACTGGACCTATTCAGTCTCAAGTTACAGGAATC | + |
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Preference number: 2 (lower is better) Translates to: QGQLELQKETNKLYN*EMVTGPIQSQVTGI Trigger: GATTCCTGTAACTTGAGACTGAATAGGTCCAGTTACCATCTCCAAATTGTATAATTTATTAGTTTCTTTCTGTAGCTCAAGCTGTCCTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR CAA 90 bp | AGTGTTGCGATTATAGGAGATAACATATCTGGTTTAGCTACAGCATaGAACAGCATAGCTCAAACACTTCTATCTATTACTGTATTACAG | + |
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Preference number: 2 (lower is better) Translates to: SVAIIGDNISGLATA*NSIAQTLLSITVLQ Trigger: CTGTAATACAGTAATAGATAGAAGTGTTTGAGCTATGCTGTTCAATGCTGTAGCTAAACCAGATATGTTATCTCCTATAATCGCAACACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR GCA 72 bp | GGGCATTTCTGGGCAGAGAACCATCCTCAGGAGGCATaGACATGCAGAAAGCTTGGCTGTGTGGCAAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: GHFWAENHPQEA*TCRKLGCVARV Trigger: TACTCTTGCCACACAGCCAAGCTTTCTGCATGTGCATGCCTCCTGAGGATGGTTCTCTGCCCAGAAATGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR-3UTR CAA 90 bp | ACTGCTGTCACTCACACAGGGCATTTCTGGGCAGAGAACCATCCTCAGGAGGCATGGAAGATCTTGAACTaGAGATCTCTTGCCTGCACC | + |
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Preference number: 3 (lower is better) Translates to: TAVTHTGHFWAENHPQEAWKILN*RSLACT Trigger: GGTGCAGGCAAGAGATCTCAAGTTCAAGATCTTCCA...TGCCTCCTGAGGATGGTTCTCTGCCCAGAAATGCCCTGTGTGAGTGACAGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR GCA 72 bp | TTCTGGGCAGAGAACCATCCTCAGGAGGCATGCACATaGAGAAAGCTTGGCTGTGTGGCAAGAGTAAGCATT | + |
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Preference number: 3 (lower is better) Translates to: FWAENHPQEACT*RKLGCVARVSI Trigger: AATGCTTACTCTTGCCACACAGCCAAGCTTTCTGCATGTGCATGCCTCCTGAGGATGGTTCTCTGCCCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR CCA 72 bp | CTGCACCCAGCAGTTTCAATAATTCCTAAAATTGGATaGAACCCCAAACTGCTGTCACTCACACAGGGCATT | + |
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Preference number: 3 (lower is better) Translates to: LHPAVSIIPKIG*NPKLLSLTQGI Trigger: AATGCCCTGTGTGAGTGACAGCAGTTTGGGGTTCCATCCAATTTTAGGAATTATTGAAACTGCTGGGTGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR GCA 72 bp | CATTCAAAAGAAAACATCTCTGTGGGTTCTTGTTCTTaGCAGCGATTGATACTGTTTCCCTGTTCACTGGAG | + |
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Preference number: 3 (lower is better) Translates to: HSKENISVGSCS*QRLILFPCSLE Trigger: CTCCAGTGAACAGGGAAACAGTATCAATCGCTGGCAAGAACAAGAACCCACAGAGATGTTTTCTTTTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR TCA 90 bp | ACTGCTGTCACTCACACAGGGCATTTCTGGGCAGAGAACCATCCTCAGGAGGCACTGCTACCACAACCTTaGCAGGCCCTTCGTTGGACT | + |
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Preference number: 4 (lower is better) Translates to: TAVTHTGHFWAENHPQEALLPQP*QALRWT Trigger: AGTCCAACGAAGGGCCTGTCAAGGTTGTGGTAGCAG...TGCCTCCTGAGGATGGTTCTCTGCCCAGAAATGCCCTGTGTGAGTGACAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR GCA 90 bp | GGGCATTTCTGGGCAGAGAACCATCCTCAGGAGGCATGCACATGCAGAAAGCTTTGTTTGTGTTGGCAGTaGAATCCACCTTTGCTAATG | + |
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Preference number: 4 (lower is better) Translates to: GHFWAENHPQEACTCRKLCLCWQ*NPPLLM Trigger: CATTAGCAAAGGTGGATTGCACTGCCAACACAAACA...AAGCTTTCTGCATGTGCATGCCTCCTGAGGATGGTTCTCTGCCCAGAAATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR TCA 90 bp | GAGATCTCTTGCCTGCACCTCCCAAGTGTTGCGATTATAGGAGATAACATATCTGTTTCTTCAAGTGGCTaGCAATTCCATCAGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: EISCLHLPSVAIIGDNISVSSSG*QFHQQS Trigger: GGACTGCTGATGGAATTGTCAGCCACTTGAAGAAAC...AGATATGTTATCTCCTATAATCGCAACACTTGGGAGGTGCAGGCAAGAGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR GCA 90 bp | TTTGTTTTTGAAAGATCAAACCTGTTTAAGATGCTAGCCTCAAAACCTGCTATGCAGGGGCAAGCCTCTTaGAATGTCCACACCAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: FVFERSNLFKMLASKPAMQGQAS*NVHTRG Trigger: CCCCCTGGTGTGGACATTGCAAGAGGCTTGCCCCTG...CATAGCAGGTTTTGAGGCTAGCATCTTAAACAGGTTTGATCTTTCAAAAACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR GCA 90 bp | GATCTTGAACTTGAGATCTCTTGCCTGCACCTCCCAAGTGTTGCGATTATAGGACCATCAAAGTATTCTTaGAGGAACTGTTCAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: DLELEISCLHLPSVAIIGPSKYS*RNCSRA Trigger: GGCTCTTGAACAGTTCCTGCAAGAATACTTTGATGG...TCCTATAATCGCAACACTTGGGAGGTGCAGGCAAGAGATCTCAAGTTCAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR CAA 72 bp | CCATTCAAAAGAAAACATCTCTGTGGGTTCTTGTTCTaGCCAGCGATTGATACTGTTTCCCTGTTCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: PFKRKHLCGFLF*PAIDTVSLFTG Trigger: TCCAGTGAACAGGGAAACAGTATCAATCGCTGGCAAGAACAAGAACCCACAGAGATGTTTTCTTTTGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR GCA 90 bp | GAGATCTCTTGCCTGCACCTCCCAAGTGTTGCGATTATAGGAGATAACATATCTTTTAGGAATTCAGAGTaGCCATCACTGAATAAATCC | + |
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Preference number: 4 (lower is better) Translates to: EISCLHLPSVAIIGDNISFRNSE*PSLNKS Trigger: GGATTTATTCAGTGATGGGCACTCTGAATTCCTAAA...AGATATGTTATCTCCTATAATCGCAACACTTGGGAGGTGCAGGCAAGAGATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR CAA 72 bp | GCCAGGGAGGGAGACCATCACAAGTTCAAGGACAGCTaGAGCTACAGAAAGAAACTAATAAATTATACAATT | + |
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Preference number: 4 (lower is better) Translates to: AREGDHHKFKDS*SYRKKLINYTI Trigger: AATTGTATAATTTATTAGTTTCTTTCTGTAGCTCAAGCTGTCCTTGAACTTGTGATGGTCTCCCTCCCTGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| 3UTR CAA 72 bp | TTTAATCCATTCAAAAGAAAACATCTCTGTGGGTTCTaGTTCTTGCCAGCGATTGATACTGTTTCCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: FNPFKRKHLCGF*FLPAIDTVSLF Trigger: GAACAGGGAAACAGTATCAATCGCTGGCAAGAACAAGAACCCACAGAGATGTTTTCTTTTGAATGGATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR TCA 90 bp | ACCTATTCAGTCTCAAGTTACAGGAATCAGCATAGCTGGTTTTCTTTGTTTTTGTTATCTTCCGTCATATaGGGACAGAGACCAAAAATG | + |
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Preference number: 4 (lower is better) Translates to: TYSVSSYRNQHSWFSLFLLSSVI*GQRPKM Trigger: CATTTTTGGTCTCTGTCCTCATATGACGGAAGATAA...CAAAAACAAAGAAAACCAGCTATGCTGATTCCTGTAACTTGAGACTGAATAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR TCA 90 bp | ACCTATTCAGTCTCAAGTTACAGGAATCAGCATAGCTGGTTTTCTTTGTTTTTGTATTTGGATCTTTGCTaGGTTTTTCTCCCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: TYSVSSYRNQHSWFSLFLYLDLC*VFLPAL Trigger: AAGAGCTGGGAGAAAAACTCAGCAAAGATCCAAATA...CAAAAACAAAGAAAACCAGCTATGCTGATTCCTGTAACTTGAGACTGAATAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR GCA 90 bp | TTTGTTTTTGAAAGATCAAACCTGTTTAAGATGCTAGCCTCAAAACCTGCTATGTTAGAGGTCCTCTTGTaGCTTCTTCTTCTTCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: FVFERSNLFKMLASKPAMLEVLL*LLLLLR Trigger: CCTAAGAAGAAGAAGAAGGCACAAGAGGACCTCTAA...CATAGCAGGTTTTGAGGCTAGCATCTTAAACAGGTTTGATCTTTCAAAAACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR CAA 90 bp | CTACACCCAATGATTTGGGGAGAGCTGCACCCAGCAGTTTCAATAATTCCTAAATCAGGGGCAAGCCTCTaGCAATGTCCACACCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: LHPMIWGELHPAVSIIPKSGASL*QCPHQG Trigger: CCCCTGGTGTGGACATTGCAAGAGGCTTGCCCCTGA...TTTAGGAATTATTGAAACTGCTGGGTGCAGCTCTCCCCAAATCATTGGGTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR CAA 90 bp | GGGCATTTCTGGGCAGAGAACCATCCTCAGGAGGCATGCACATGCAGAAAGCTTATGGTAGGAAAACCCTaGACTTCATATGGAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: GHFWAENHPQEACTCRKLMVGKP*TSYGEG Trigger: GCCTTCTCCATATGAAGTCAAGGGTTTTCCTACCAT...AAGCTTTCTGCATGTGCATGCCTCCTGAGGATGGTTCTCTGCCCAGAAATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR CAA 90 bp | CTACACCCAATGATTTGGGGAGAGCTGCACCCAGCAGTTTCAATAATTCCTAAACAGTGCAATCCACCTTaGCTAATGGGACTATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: LHPMIWGELHPAVSIIPKQCNPP*LMGLFL Trigger: AAGGAATAGTCCCATTAGCAAAGGTGGATTGCACTG...TTTAGGAATTATTGAAACTGCTGGGTGCAGCTCTCCCCAAATCATTGGGTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR CAA 90 bp | TTTGTTTTTGAAAGATCAAACCTGTTTAAGATGCTAGCCTCAAAACCTGCTATGTCTGCTACCACAACCTaGACAGGCCCTTCGTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: FVFERSNLFKMLASKPAMSATTT*TGPSLD Trigger: GTCCAACGAAGGGCCTGTCAAGGTTGTGGTAGCAGA...CATAGCAGGTTTTGAGGCTAGCATCTTAAACAGGTTTGATCTTTCAAAAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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| CDS-3UTR CAA 90 bp | TTTGTTTTTGAAAGATCAAACCTGTTTAAGATGCTAGCCTCAAAACCTGCTATGACAATATTTGGATCTTaGCTGAGTTTTTCTCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: FVFERSNLFKMLASKPAMTIFGS*LSFSPS Trigger: GCTGGGAGAAAAACTCAGCAAAGATCCAAATATTGT...CATAGCAGGTTTTGAGGCTAGCATCTTAAACAGGTTTGATCTTTCAAAAACAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028683.14 |
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