Pregenerated sensors for PDIA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024184Ensembl transcript IDs: ENSMUST00000039113.14, ENSMUST00000120333.8, ENSMUST00000142410.2, ENSMUST00000148134.8
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCCCACCTTGGCCAAGGTaGCCACAGCTGACTCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPPPWPR*PQLTQP Trigger: CGGCTGAGTCAGCTGTGGTCACCTTGGCCAAGGTGG...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCCACGAGAGTCTTGACTaGCCCCTGGTCCCAGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPHESLD*PLVPVR Trigger: CCTGACTGGGACCAGGGGCCAGTCAAGACTCTCGTG...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCTCAGCCACTCAGCAATaGCCTCAGCAGTCTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPSATQQ*PQQSWA Trigger: GGCCCAAGACTGCTGAGGGCATTGCTGAGTGGCTGA...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR GCA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCTTCCCCATGGAGAACTaGCTGGCAGAAGGCAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPFPMEN*LAEGSH Trigger: GTGGCTGCCTTCTGCCAGGCAGTTCTCCATGGGGAA...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | CATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGGTCTTGACTGGCCCCTaGTCCCAGTCAGGGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: HSTQLPPAPENTTLWITVVLTGP*SQSGGI Trigger: GATACCCCCTGACTGGGACCAGGGGCCAGTCAAGAC...CACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR TCA 90 bp | CATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGGAGGAGCTGCCTCTCTaGAGTCTGTCAGCAGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HSTQLPPAPENTTLWITVEELPL*SLSAVP Trigger: GGGAACTGCTGACAGACTTCAGAGAGGCAGCTCCTC...CACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCAGATACCATCCTCCTTaGGGACTTCTTCCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPRYHPP*GLLPQW Trigger: CCACTGGGGAAGAAGTCCCCAAGGAGGATGGTATCT...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | CATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGCAATGCCTCCCAGGCTaGAGCCATCTCCTTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: HSTQLPPAPENTTLWITVQCLPG*SHLLAV Trigger: CACTGCAAGGAGATGGCTCCAGCCTGGGAGGCATTG...CACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR TCA 90 bp | GGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCCACCATCAGGGCTaGATGCTCCTGCAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTTCLFIVHSSLQHLRTPLHHQG*MLLQCQ Trigger: CTGGCACTGCAGGAGCATTCAGCCCTGATGGTGGAG...TGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR TCA 90 bp | AGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCAGGGGGTATCTCCTTaGTTTCCCCATGGAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: STQLPPAPENTTLWITVSQGVSP*FPHGEL Trigger: CAGTTCTCCATGGGGAAATCAAGGAGATACCCCCTG...GGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | ATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTAGGGCTGAATGCTCCTaGAGTGCCAGGCTCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IVHSSLQHLRTPLSGLQCRAECS*SARLRV Trigger: AACCCTGAGCCTGGCACTGCAGGAGCATTCAGCCCT...ACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR GCA 90 bp | CATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGCGGGAGCTAGTTCTTTaGAGTGACCACACCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSTQLPPAPENTTLWITVRELVL*SDHTMG Trigger: CCCCATGGTGTGGTCACTGCAAAGAACTAGCTCCCG...CACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR GCA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGGGCAGCCACAGAAGCTaGAGTGATGGCTATCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQGSHRS*SDGYHP Trigger: GGGGTGATAGCCATCACTGCAGCTTCTGTGGCTGCC...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR GCA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGGGTGGAATTGGCTTGTaGTTCTGGGGCAGAGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQGGIGL*FWGRGC Trigger: GCAGCCTCTGCCCCAGAAGCACAAGCCAATTCCACC...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR CCA 90 bp | TGGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCCACGAGAGTCTTGACTaGCCCCTGGTCCCAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WDNMFIHSTQLPPAPENTHESLD*PLVPVR Trigger: CCTGACTGGGACCAGGGGCCAGTCAAGACTCTCGTG...GGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGCAATGCCTCCCAGGCTaGAGCCATCTCCTTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQQCLPG*SHLLAV Trigger: CACTGCAAGGAGATGGCTCCAGCCTGGGAGGCATTG...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR CCA 90 bp | CATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGGACCCAAGGTGGAATTaGCTTGTGCTTCTGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSTQLPPAPENTTLWITVDPRWN*LVLLGQ Trigger: CTGCCCCAGAAGCACAAGCCAATTCCACCTTGGGTC...CACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR CCA 90 bp | AGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCCTTGGGACCCAAGGTaGAATTGGCTTGTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: STQLPPAPENTTLWITVSPWDPR*NWLVLL Trigger: CAGAAGCACAAGCCAATTCCACCTTGGGTCCCAAGG...GGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | ATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAACCATCAGGGCTGAATaGTCCTGCAGTGCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IHSTQLPPAPENTTLWITTIRAE*SCSARL Trigger: GAGCCTGGCACTGCAGGAGCATTCAGCCCTGATGGT...TGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR GCA 90 bp | GACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTGGAGCCATCTCCTTaGAGTGGCTGCACCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DNMFIHSTQLPPAPENTTLEPSP*SGCTMG Trigger: CCCCATGGTGCAGCCACTGCAAGGAGATGGCTCCAG...AGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR GCA 90 bp | TTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACTGGAGCCATCTCCTTaGAGTGGCTGCACCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFIVHSSLQHLRTPLSGLLEPSP*SGCTMG Trigger: CCCCATGGTGCAGCCACTGCAAGGAGATGGCTCCAG...TAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGGTACTTCTCTGCCAATaGCTCCCAGGCTGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQVLLCQ*LPGWSH Trigger: ATGGCTCCAGCCTGGGAGGCATTGGCAGAGAAGTAC...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR CCA 90 bp | TCTGGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACAGGACTTCTTCCCCAGTaGGCTCCTCAGGGAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SGTTCLFIVHSSLQHLRTGLLPQ*APQGAP Trigger: AGGTGCTCCCTGAGGAGCCCACTGGGGAAGAAGTCC...TGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | TTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTGTCTTGACTGGCCCCTaGTCCCAGTCAGGGGGTATC | + |
|
Preference number: 4 (lower is better) Translates to: FIHSTQLPPAPENTTLWIVLTGP*SQSGGI Trigger: GATACCCCCTGACTGGGACCAGGGGCCAGTCAAGAC...AATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR TCA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGCTGCAGGAAAGAACTTaGGAGTGGGATAGCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQLQERT*EWDSRA Trigger: TGCTCGGCTATCCCACTCTCAAGTTCTTTCCTGCAG...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTCTCCTTGCAGTGGCTaGACCATGGGGCATAGAACT | + |
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Preference number: 4 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQSPCSG*TMGHRT Trigger: AGTTCTATGCCCCATGGTGCAGCCACTGCAAGGAGA...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | GACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTGGTGGAATTGGCTTGTaGTTCTGGGGCAGAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: DNMFIHSTQLPPAPENTTGGIGL*FWGRGC Trigger: GCAGCCTCTGCCCCAGAAGCACAAGCCAATTCCACC...AGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | ATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACATTGGCCATCAGTGCCTaGACACCTTCCTCATCCTCC | + |
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Preference number: 4 (lower is better) Translates to: IHSTQLPPAPENTTLWITLAISA*TPSSSS Trigger: GGAGGATGAGGAAGGTGTCCAGGCACTGATGGCCAA...TGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | ATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACACCATGGAGAACTGCCTaGCAGAAGGCAGCCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: IHSTQLPPAPENTTLWITPWRTA*QKAATE Trigger: TTCTGTGGCTGCCTTCTGCCAGGCAGTTCTCCATGG...TGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | CATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTGCTTGATTTCCCCATaGAGAACTGCCTGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HSTQLPPAPENTTLWITVCLISP*RTAWQK Trigger: CTTCTGCCAGGCAGTTCTCCATGGGGAAATCAAGCA...CACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR TCA 90 bp | TGGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCGTTGTGGCTGGTCAGTaGAGCCAAAGGTCATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: WDNMFIHSTQLPPAPENTVVAGQ*SQRSCP Trigger: TGGACATGACCTTTGGCTTCACTGACCAGCCACAAC...GGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR TCA 90 bp | ATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACACTGCAGGAAAGAACTTaGGAGTGGGATAGCCGAGCA | + |
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Preference number: 4 (lower is better) Translates to: IHSTQLPPAPENTTLWITLQERT*EWDSRA Trigger: TGCTCGGCTATCCCACTCTCAAGTTCTTTCCTGCAG...TGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCTCATCAAAGGCAACCTaGTCAAAATTCTTGCTCACG | + |
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Preference number: 4 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPSSKAT*SKFLLT Trigger: CGTGAGCAAGAATTTTGAGCAGGTTGCCTTTGATGA...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | TTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTGTACTTCTCTGCCAATaGCTCCCAGGCTGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: FIHSTQLPPAPENTTLWIVLLCQ*LPGWSH Trigger: ATGGCTCCAGCCTGGGAGGCATTGGCAGAGAAGTAC...AATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGCTTTCGGTCAGGCCCTaGAGGAAAGAACTTGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQLSVRP*RKELES Trigger: ACTCTCAAGTTCTTTCCTGCAGGGCCTGACCGAAAG...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR CCA 90 bp | GGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACAGGAGCAGCAACACTaGCAGAAGCTGCTTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: GTTCLFIVHSSLQHLRTPQEQQH*QKLLVH Trigger: ATGGACAAGCAGCTTCTGCCAGTGTTGCTGCTCCTG...TGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | GACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTTGTCCAGGGCATCCTTaGCCAAGGCCAGGAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: DNMFIHSTQLPPAPENTTCPGHP*PRPGKL Trigger: CAACTTTCCTGGCCTTGGCCAAGGATGCCCTGGACA...AGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CCA 90 bp | TTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTGACCCAAGGTGGAATTaGCTTGTGCTTCTGGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FIHSTQLPPAPENTTLWIDPRWN*LVLLGQ Trigger: CTGCCCCAGAAGCACAAGCCAATTCCACCTTGGGTC...AATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR TCA 90 bp | TTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGCAGCAGGTGGTTaGGGATCTTGGCTGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: FIHSTQLPPAPENTTLWITAAGG*GSWLQR Trigger: TCTTTGCAGCCAAGATCCTCAACCACCTGCTGCTGT...AATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR TCA 90 bp | TGGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCAGCAGTTCCCTGTGTTaGGCTAGTGTCTGGTTCACA | + |
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Preference number: 4 (lower is better) Translates to: WDNMFIHSTQLPPAPENTSSSLC*ASVWFT Trigger: TGTGAACCAGACACTAGCTCAACACAGGGAACTGCT...GGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR TCA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCATGGGGCATAGAACTTaGCAAACACATTCTTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPMGHRT*QTHSWF Trigger: AAACCAAGAATGTGTTTGTCAAGTTCTATGCCCCAT...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | TTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACCTGAATGGAGGAGCTaGCTCTCTGAAGTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFIVHSSLQHLRTPLSGLPEWRS*LSEVCQ Trigger: CTGACAGACTTCAGAGAGGCAGCTCCTCCATTCAGG...TAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR GCA 90 bp | TTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTTCTCCTTGCAGTGGCTaGACCATGGGGCATAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FIHSTQLPPAPENTTLWISPCSG*TMGHRT Trigger: AGTTCTATGCCCCATGGTGCAGCCACTGCAAGGAGA...AATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR GCA 90 bp | GACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTATCCTTGTACTTCTCTaGCAATGCCTCCCAGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: DNMFIHSTQLPPAPENTTILVLL*QCLPGW Trigger: CCAGCCTGGGAGGCATTGGCAGAGAAGTACAAGGAT...AGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR GCA 90 bp | TTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTAATCCTTGTACTTCTCTaGCAATGCCTCCCAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFIVHSSLQHLRTPLSGLILVLL*QCLPGW Trigger: CCAGCCTGGGAGGCATTGGCAGAGAAGTACAAGGAT...TAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
||
| CDS-3UTR GCA 90 bp | TGGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCCTTTCGGTCAGGCCCTaGAGGAAAGAACTTGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: WDNMFIHSTQLPPAPENTLSVRP*RKELES Trigger: ACTCTCAAGTTCTTTCCTGCAGGGCCTGACCGAAAG...GGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CCA 90 bp | ATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTGTGCGGTTTCCATTCTaGAAGAACTTGAGTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IVHSSLQHLRTPLSGLQCVRFPF*KNLSVG Trigger: CCCTACACTCAAGTTCTTCCAGAATGGAAACCGCAC...ACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CCA 90 bp | TTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTCCTTGGGACCCAAGGTaGAATTGGCTTGTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FIHSTQLPPAPENTTLWIPWDPR*NWLVLL Trigger: CAGAAGCACAAGCCAATTCCACCTTGGGTCCCAAGG...AATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
||
| CDS-3UTR TCA 90 bp | TGGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCTTTCCCTGTAGATCCTaGAAGAAGCCAATGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: WDNMFIHSTQLPPAPENTFPCRS*KKPMTT Trigger: GGTGGTCATTGGCTTCTTTCAGGATCTACAGGGAAA...GGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR TCA 90 bp | ATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACATCAGGAGATAGTGCTTaGTTTCCCCATGGAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: IHSTQLPPAPENTTLWITSGDSA*FPHGEL Trigger: CAGTTCTCCATGGGGAAATCAAGCACTATCTCCTGA...TGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CCA 90 bp | GACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTACAAACAGCAGCAGGTaGTTGAGGATCTTGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DNMFIHSTQLPPAPENTTTNSSR*LRILAA Trigger: TGCAGCCAAGATCCTCAACCACCTGCTGCTGTTTGT...AGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR TCA 90 bp | TCTGGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCTGAAAGAAGCCAATaGCCACCATATCCCATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGTTCLFIVHSSLQHLRTPERSQ*PPYPIW Trigger: CCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGG...TGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR TCA 90 bp | ATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACACCACAGTATCCTTGGTaGGGCCAAACTTCTCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IHSTQLPPAPENTTLWITPQYPW*GQTSQK Trigger: TTTTTGAGAAGTTTGGCCTCACCAAGGATACTGTGG...TGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR GCA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTCATCAAAGGCAACCTaGTCAAAATTCTTGCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQSSKAT*SKFLLT Trigger: CGTGAGCAAGAATTTTGAGCAGGTTGCCTTTGATGA...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
||
| CDS-3UTR CCA 90 bp | ATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTATCTTAGGTGATGTCTaGCTGTTGAATTCTGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: IVHSSLQHLRTPLSGLQCILGDV*LLNSVT Trigger: GGTCACAGAATTCAACAGCCAGACATCACCTAAGAT...ACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR TCA 90 bp | TGGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCCCTCATCAAACTTCTTaGAAAGGACCACAGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: WDNMFIHSTQLPPAPENTPHQTS*KGPQYP Trigger: AGGATACTGTGGTCCTTTTCAAGAAGTTTGATGAGG...GGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR GCA 90 bp | TTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTAACTCTTCTGGGTTTGTaGGGTTTCCATTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFIVHSSLQHLRTPLSGLTLLGL*GFHSGR Trigger: TCTTCCAGAATGGAAACCGCACAAACCCAGAAGAGT...TAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR TCA 90 bp | GACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTATGGGGCATAGAACTTaGCAAACACATTCTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DNMFIHSTQLPPAPENTTMGHRT*QTHSWF Trigger: AAACCAAGAATGTGTTTGTCAAGTTCTATGCCCCAT...AGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS TCA 90 bp | CCTTGGTCAGCTCCGGTTCCGCAGGGCCATCCACCTTGGCCAAGGTaGCCACAGCTGACTCAGCCGCCAGCAGGGCAGCCGCCTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PWSAPVPQGHPPWPR*PQLTQPPAGQPPCC Trigger: ACAGCAAGGCGGCTGCCCTGCTGGCGGCTGAGTCAGCTGTGGTCACCTTGGCCAAGGTGGATGGCCCTGCGGAACCGGAGCTGACCAAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
||
| CDS GCA 90 bp | GATGTGTGGCACTGGGCCCCACTCGCCGCCTCAGCCACTCAGCAATaGCCTCAGCAGTCTTGGGCCCTGCGTACTCTTCTGGGTTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DVWHWAPLAASATQQ*PQQSWALRTLLGLC Trigger: GCACAAACCCAGAAGAGTACGCAGGGCCCAAGACTGCTGAGGGCATTGCTGAGTGGCTGAGGCGGCGAGTGGGGCCCAGTGCCACACATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
||
| CDS CCA 90 bp | CCATCAGTGCCTGGACACCTTCCTCATCCTCCAGATGTGTGGCACTaGGCCCCACTCGCCGCCTCAGCCACTCAGCAATGCCCTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSVPGHLPHPPDVWH*APLAASATQQCPQQ Trigger: CTGCTGAGGGCATTGCTGAGTGGCTGAGGCGGCGAGTGGGGCCCAGTGCCACACATCTGGAGGATGAGGAAGGTGTCCAGGCACTGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
||
| CDS CCA 90 bp | ATTTGGCCATCAGTGCCTGGACACCTTCCTCATCCTCCAGATGTGTaGCACTGGGCCCCACTCGCCGCCTCAGCCACTCAGCAATGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: IWPSVPGHLPHPPDV*HWAPLAASATQQCP Trigger: AGGGCATTGCTGAGTGGCTGAGGCGGCGAGTGGGGCCCAGTGCCACACATCTGGAGGATGAGGAAGGTGTCCAGGCACTGATGGCCAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
||
| CDS CCA 90 bp | CTACAGCTCCTCCTTGGGACCCAAGGTGGAATTGGCTTGTGCTTCTaGGGCAGAGGCTGCAGGCTCCTTGGGTTCCTCCTTAGGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LQLLLGTQGGIGLCF*GRGCRLLGFLLRQV Trigger: CACCTGCCTAAGGAGGAACCCAAGGAGCCTGCAGCCTCTGCCCCAGAAGCACAAGCCAATTCCACCTTGGGTCCCAAGGAGGAGCTGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000148134.8 |
||
| CDS-3UTR CAA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCTCCAGGCCAGTCTCCTaGTCTACCGGGAAGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPSRPVS*STGKSA Trigger: GGCCGACTTCCCGGTAGACAAGGAGACTGGCCTGGA...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS GCA 90 bp | TCGCCGCCTCAGCCACTCAGCAATGCCCTCAGCAGTCTTGGGCCCTaGGTACTCTTCTGGGTTTGTGCGGTTTCCATTCTGGAAGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SPPQPLSNALSSLGP*VLFWVCAVSILEEL Trigger: AAGTTCTTCCAGAATGGAAACCGCACAAACCCAGAAGAGTACGCAGGGCCCAAGACTGCTGAGGGCATTGCTGAGTGGCTGAGGCGGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
||
| CDS GCA 90 bp | CTCGGCAATGACAATGTCCTCACGATCCTTGTACTTCTCTGCCAATaGCTCCCAGGCTGGAGCCATCTCCTTGCAGTGGCTGCACCATGG | + |
|
Preference number: 5 (lower is better) Translates to: LGNDNVLTILVLLCQ*LPGWSHLLAVAAPW Trigger: CCATGGTGCAGCCACTGCAAGGAGATGGCTCCAGCCTGGGAGGCATTGGCAGAGAAGTACAAGGATCGTGAGGACATTGTCATTGCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000148134.8 |
||
| CDS CCA 90 bp | ACCATCAGGGCTGAATGCTCCTGCAGTGCCAGGCTCAGGGTTCGGTaGTTCAAGACCAAGATACCATCCTCCTTGGGGACTTCTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TIRAECSCSARLRVR*FKTKIPSSLGTSSP Trigger: TGGGGAAGAAGTCCCCAAGGAGGATGGTATCTTGGTCTTGAACCACCGAACCCTGAGCCTGGCACTGCAGGAGCATTCAGCCCTGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
||
| CDS GCA 90 bp | TCCCTGAAAGAAGCCAATGACCACCATATCCCATTTGGCCATCAGTaGCTGGACACCTTCCTCATCCTCCAGATGTGTGGCACTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLKEANDHHIPFGHQ*LDTFLILQMCGTGP Trigger: GGGCCCAGTGCCACACATCTGGAGGATGAGGAAGGTGTCCAGGCACTGATGGCCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120333.8 |
||
| CDS CCA 90 bp | GTCAGCAGCCACATCCACCATTACGAACAACACCTGCCCCCTGAATaGAGGAGCTGCCTCTCTGAAGTCTGTCAGCAGTTCCCTGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSHIHHYEQHLPPE*RSCLSEVCQQFPVL Trigger: CAACACAGGGAACTGCTGACAGACTTCAGAGAGGCAGCTCCTCCATTCAGGGGGCAGGTGTTGTTCGTAATGGTGGATGTGGCTGCTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
||
| CDS-3UTR CAA 90 bp | ATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTGCAGGGCCATCCACCTaGGCCAAGGTGACCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: IVHSSLQHLRTPLSGLQCAGPST*AKVTTA Trigger: AGCTGTGGTCACCTTGGCCAAGGTGGATGGCCCTGC...ACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | CATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTTGCTCACGAGAGTCTaGACTGGCCCCTGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HSTQLPPAPENTTLWITVLLTRV*TGPWSQ Trigger: CTGGGACCAGGGGCCAGTCAAGACTCTCGTGAGCAA...CACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
||
| CDS-3UTR CAA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCCCGCTGTCCAGGAACTaGGAGAATGTCTCTAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPPLSRN*ENVSRS Trigger: GGACCTAGAGACATTCTCCAAGTTCCTGGACAGCGG...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
||
| CDS GCA 90 bp | ATCCTGAAAGAAGCCAATGACCACCATATCCCATTTGGCCATCAGTaGCTGGACACCTTCCTCATCCTCCAGATGTGTGGCACTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ILKEANDHHIPFGHQ*LDTFLILQMCGTGP Trigger: GGGCCCAGTGCCACACATCTGGAGGATGAGGAAGGTGTCCAGGCACTGATGGCCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000142410.2 |
||
| CDS GCA 90 bp | ACATGGCTGTTGTCAGCAGCCACATCCACCATTACGAACAACACCTaGCCCCTGAATGGAGGAGCTGCCTCTCTGAAGTCTGTCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TWLLSAATSTITNNT*PLNGGAASLKSVSS Trigger: ACTGCTGACAGACTTCAGAGAGGCAGCTCCTCCATTCAGGGGGCAGGTGTTGTTCGTAATGGTGGATGTGGCTGCTGACAACAGCCATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
||
| CDS GCA 90 bp | ATCCAACTCGGCAATGACAATGTCCTCACGATCCTTGTACTTCTCTaGCAATGCCTCCCAGGCTGGAGCCATCTCCTTGCAGTGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IQLGNDNVLTILVLL*QCLPGWSHLLAVAA Trigger: TGCAGCCACTGCAAGGAGATGGCTCCAGCCTGGGAGGCATTGGCAGAGAAGTACAAGGATCGTGAGGACATTGTCATTGCCGAGTTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000148134.8 |
||
| CDS-3UTR CAA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTTGCTCACGAGAGTCTaGACTGGCCCCTGGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQLLTRV*TGPWSQ Trigger: CTGGGACCAGGGGCCAGTCAAGACTCTCGTGAGCAA...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
||
| CDS-3UTR CAA 90 bp | GGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCAGAGGCTGCAGGCTCCTaGGGTTCCTCCTTAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTTCLFIVHSSLQHLRTPEAAGS*GSSLGR Trigger: CCTGCCTAAGGAGGAACCCAAGGAGCCTGCAGCCTC...TGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS GCA 90 bp | GCAAAGATCTTAGGTGATGTCTGGCTGTTGAATTCTGTGACCAGGTaGATGCTATGTATGACGAGGAAGCGGGACAGGTCCCCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AKILGDVWLLNSVTR*MLCMTRKRDRSPRS Trigger: GGACCTGGGGGACCTGTCCCGCTTCCTCGTCATACATAGCATGCACCTGGTCACAGAATTCAACAGCCAGACATCACCTAAGATCTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
||
| CDS GCA 90 bp | GATTTCCCCATGGAGAACTGCCTGGCAGAAGGCAGCCACAGAAGCTaGAGTGATGGCTATCACCCCTGTAGGTGCATACTTCTTGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: DFPMENCLAEGSHRS*SDGYHPCRCILLGS Trigger: ACTACCAAGAAGTATGCACCTACAGGGGTGATAGCCATCACTGCAGCTTCTGTGGCTGCCTTCTGCCAGGCAGTTCTCCATGGGGAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
||
| CDS CCA 90 bp | CCACTCAGCAATGCCCTCAGCAGTCTTGGGCCCTGCGTACTCTTCTaGGTTTGTGCGGTTTCCATTCTGGAAGAACTTGAGTGTAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLSNALSSLGPCVLF*VCAVSILEELECRV Trigger: TACCCTACACTCAAGTTCTTCCAGAATGGAAACCGCACAAACCCAGAAGAGTACGCAGGGCCCAAGACTGCTGAGGGCATTGCTGAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
||
| CDS-3UTR CAA 90 bp | GACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTAGCAGGGCAGCCGCCTaGCTGTACTCGGGAGCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: DNMFIHSTQLPPAPENTTSRAAA*LYSGAS Trigger: ACTAGCTCCCGAGTACAGCAAGGCGGCTGCCCTGCT...AGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | AGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCACCACCATATCCCATTaGGCCATCAGTGCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: STQLPPAPENTTLWITVSTTISH*AISAWT Trigger: TGTCCAGGCACTGATGGCCAAATGGGATATGGTGGT...GGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | TTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTAGAGGCTGCAGGCTCCTaGGGTTCCTCCTTAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFIVHSSLQHLRTPLSGLEAAGS*GSSLGR Trigger: CCTGCCTAAGGAGGAACCCAAGGAGCCTGCAGCCTC...TAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
||
| CDS TCA 90 bp | AATGGAGGAGCTGCCTCTCTGAAGTCTGTCAGCAGTTCCCTGTGTTaGGCTAGTGTCTGGTTCACAAACAGCAGCAGGTGGTTGAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: NGGAASLKSVSSSLC*ASVWFTNSSRWLRI Trigger: GATCCTCAACCACCTGCTGCTGTTTGTGAACCAGACACTAGCTCAACACAGGGAACTGCTGACAGACTTCAGAGAGGCAGCTCCTCCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
||
| CDS TCA 90 bp | AGTTGTGGCTGGTCAGTGAAGCCAAAGGTCATGTCCAGGGCATCCTaGAAGAAGCCAATGACCACCATATCCCATTTGGCCATCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCGWSVKPKVMSRAS*KKPMTTISHLAISA Trigger: GGCACTGATGGCCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGGATGCCCTGGACATGACCTTTGGCTTCACTGACCAGCCACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142410.2 |
||
| CDS GCA 90 bp | GCCAAAGGTCATGTCCAGGGCATCCTTGGCCAAGGCCAGGAAAGTTaGCATATCCTTTCCCTGAAAGAAGCCAATGACCACCATATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AKGHVQGILGQGQES*HILSLKEANDHHIP Trigger: TGGGATATGGTGGTCATTGGCTTCTTTCAGGGAAAGGATATGGCAACTTTCCTGGCCTTGGCCAAGGATGCCCTGGACATGACCTTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120333.8 |
||
| CDS-3UTR CAA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGACCACTTCAAACTCCTaGGTCAGCTCCGGTTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQTTSNS*VSSGSA Trigger: TGCGGAACCGGAGCTGACCAAGGAGTTTGAAGTGGT...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | AGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCAGGACCACAGTATCCTaGGTGAGGCCAAACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: STQLPPAPENTTLWITVSRTTVS*VRPNFS Trigger: TGAGAAGTTTGGCCTCACCAAGGATACTGTGGTCCT...GGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | GTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTCCCAGGTGGTTGAGGATCTaGGCTGCAAAGATCTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VHSSLQHLRTPLSGLQCPRWLRI*AAKILG Trigger: ACCTAAGATCTTTGCAGCCAAGATCCTCAACCACCT...GGGACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | ATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACACAAGGTGGAATTGGCTaGTGCTTCTGGGGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IHSTQLPPAPENTTLWITQGGIG*CFWGRG Trigger: GCCTCTGCCCCAGAAGCACAAGCCAATTCCACCTTG...TGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS TCA 90 bp | CCAAGGCCAGGAAAGTTGCCATATCCTTTCCCTGAAAGAAGCCAATaGCCACCATATCCCATTTGGCCATCAGTGCCTGGACACCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRPGKLPYPFPERSQ*PPYPIWPSVPGHLP Trigger: AGGAAGGTGTCCAGGCACTGATGGCCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGGGAAAGGATATGGCAACTTTCCTGGCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120333.8 |
||
| CDS CCA 90 bp | GTCTTGGGCCCTGCGTACTCTTCTGGGTTTGTGCGGTTTCCATTCTaGAAGAACTTGAGTGTAGGGTACCCTACCACTTCAAACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLGPAYSSGFVRFPF*KNLSVGYPTTSNSL Trigger: CAAGGAGTTTGAAGTGGTAGGGTACCCTACACTCAAGTTCTTCCAGAATGGAAACCGCACAAACCCAGAAGAGTACGCAGGGCCCAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CCA 90 bp | ACCACAGTATCCTTGGTGAGGCCAAACTTCTCAAAAAGTTGTGGCTaGTCAGTGAAGCCAAAGGTCATGTCCAGGGCATCCTTGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TTVSLVRPNFSKSCG*SVKPKVMSRASLAK Trigger: CTTGGCCAAGGATGCCCTGGACATGACCTTTGGCTTCACTGACCAGCCACAACTTTTTGAGAAGTTTGGCCTCACCAAGGATACTGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS CCA 90 bp | AAGGACCACAGTATCCTTGGTGAGGCCAAACTTCTCAAAAAGTTGTaGCTGGTCAGTGAAGCCAAAGGTCATGTCCAGGGCATCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KDHSILGEAKLLKKL*LVSEAKGHVQGILG Trigger: GCCAAGGATGCCCTGGACATGACCTTTGGCTTCACTGACCAGCCACAACTTTTTGAGAAGTTTGGCCTCACCAAGGATACTGTGGTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS-3UTR CAA 90 bp | ATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTGTGGTGATGTCTGGCTGTaGAATTCTGTGACCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IVHSSLQHLRTPLSGLQCGDVWL*NSVTRC Trigger: GCACCTGGTCACAGAATTCAACAGCCAGACATCACC...ACACTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | TTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTCAAGGTGGAATTGGCTaGTGCTTCTGGGGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FIHSTQLPPAPENTTLWIQGGIG*CFWGRG Trigger: GCCTCTGCCCCAGAAGCACAAGCCAATTCCACCTTG...AATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS TCA 90 bp | TTGGCCAAGGCCAGGAAAGTTGCCATATCCTTTCCCTGTAGATCCTaGAAGAAGCCAATGACCACCATATCCCATTTGGCCATCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAKARKVAISFPCRS*KKPMTTISHLAISA Trigger: GGCACTGATGGCCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGGATCTACAGGGAAAGGATATGGCAACTTTCCTGGCCTTGGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | TGGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCAAGATACCATCCTCCTaGGGGACTTCTTCCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WDNMFIHSTQLPPAPENTKIPSS*GTSSPV Trigger: CACTGGGGAAGAAGTCCCCAAGGAGGATGGTATCTT...GGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CAA 90 bp | TTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGCCATTCTGGAAGAACTaGAGTGTAGGGTACCCTACC | + |
|
Preference number: 5 (lower is better) Translates to: FIVHSSLQHLRTPLSGLQPFWKN*SVGYPT Trigger: GGTAGGGTACCCTACACTCAAGTTCTTCCAGAATGG...CTGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CAA 90 bp | GACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTATGTCCAGGGCATCCTaGGCCAAGGCCAGGAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DNMFIHSTQLPPAPENTTMSRAS*AKARKV Trigger: AACTTTCCTGGCCTTGGCCAAGGATGCCCTGGACAT...AGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | TTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTATTCAGCACATGGCTGTaGTCAGCAGCCACATCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LFIVHSSLQHLRTPLSGLFSTWL*SAATST Trigger: GGTGGATGTGGCTGCTGACAACAGCCATGTGCTGAA...TAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | TTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTCCGCTGTCCAGGAACTaGGAGAATGTCTCTAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FIHSTQLPPAPENTTLWIPLSRN*ENVSRS Trigger: GGACCTAGAGACATTCTCCAAGTTCCTGGACAGCGG...AATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS CCA 90 bp | AGCAGGTGGTTGAGGATCTTGGCTGCAAAGATCTTAGGTGATGTCTaGCTGTTGAATTCTGTGACCAGGTGCATGCTATGTATGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRWLRILAAKILGDV*LLNSVTRCMLCMTR Trigger: CCTCGTCATACATAGCATGCACCTGGTCACAGAATTCAACAGCCAGACATCACCTAAGATCTTTGCAGCCAAGATCCTCAACCACCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS CCA 90 bp | AAGGACCACAGTATCCTTGGTGAGGCCAAACTTCTCAAAAAGTTGTaGCTGGTCAGTGAAGCCAAAGGTCATGTCCAGGGCATCCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KDHSILGEAKLLKKL*LVSEAKGHVQGILK Trigger: TTTCAGGATGCCCTGGACATGACCTTTGGCTTCACTGACCAGCCACAACTTTTTGAGAAGTTTGGCCTCACCAAGGATACTGTGGTCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142410.2 |
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| CDS-3UTR CAA 90 bp | GGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACCCTCATCAAACTTCTaGAAAAGGACCACAGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: GTTCLFIVHSSLQHLRTPPSSNF*KRTTVS Trigger: GGATACTGTGGTCCTTTTCAAGAAGTTTGATGAGGG...TGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | ATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAACCTGCTCAAAATTCTaGCTCACGAGAGTCTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: IHSTQLPPAPENTTLWITTCSKF*LTRVLT Trigger: AGTCAAGACTCTCGTGAGCAAGAATTTTGAGCAGGT...TGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS-3UTR CAA 90 bp | ATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTACAGTAGGTGCATACTTCTaGGTAGTCTCAACATTGATC | + |
|
Preference number: 5 (lower is better) Translates to: IHSTQLPPAPENTTLWITVGAYF*VVSTLI Trigger: GATCAATGTTGAGACTACCAAGAAGTATGCACCTAC...TGTAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
||
| CDS-3UTR CAA 90 bp | GGGACAACATGTTTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCATTGACAAACACATTCTaGGTTTCATCAAAGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: GTTCLFIVHSSLQHLRTPLTNTF*VSSKAT Trigger: GGTTGCCTTTGATGAAACCAAGAATGTGTTTGTCAA...TGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAAACATGTTGTCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS-3UTR CAA 90 bp | TTATTCATAGTACACAGCTCCCTCCAGCACCTGAGAACACCACTCTCTGGATTATTGACAAACACATTCTaGGTTTCATCAAAGGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: LFIVHSSLQHLRTPLSGLLTNTF*VSSKAT Trigger: GGTTGCCTTTGATGAAACCAAGAATGTGTTTGTCAA...TAATCCAGAGAGTGGTGTTCTCAGGTGCTGGAGGGAGCTGTGTACTATGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000148134.8 |
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| CDS GCA 72 bp | CACTGGGCCCCACTCGCCGCCTCAGCCACTCAGCAATaGCCTCAGCAGTCTTGGGCCCTGCGTACTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HWAPLAASATQQ*PQQSWALRTLL Trigger: CAGAAGAGTACGCAGGGCCCAAGACTGCTGAGGGCATTGCTGAGTGGCTGAGGCGGCGAGTGGGGCCCAGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CAA 72 bp | TCCTTGGTCAGCTCCGGTTCCGCAGGGCCATCCACCTaGGCCAAGGTGACCACAGCTGACTCAGCCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLVSSGSAGPST*AKVTTADSAAS Trigger: GCTGGCGGCTGAGTCAGCTGTGGTCACCTTGGCCAAGGTGGATGGCCCTGCGGAACCGGAGCTGACCAAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CAA 90 bp | ACTTCAAACTCCTTGGTCAGCTCCGGTTCCGCAGGGCCATCCACCTaGGCCAAGGTGACCACAGCTGACTCAGCCGCCAGCAGGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSNSLVSSGSAGPST*AKVTTADSAASRAA Trigger: GGCTGCCCTGCTGGCGGCTGAGTCAGCTGTGGTCACCTTGGCCAAGGTGGATGGCCCTGCGGAACCGGAGCTGACCAAGGAGTTTGAAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CAA 90 bp | GGCCCCACTCGCCGCCTCAGCCACTCAGCAATGCCCTCAGCAGTCTaGGGCCCTGCGTACTCTTCTGGGTTTGTGCGGTTTCCATTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GPTRRLSHSAMPSAV*GPAYSSGFVRFPFW Trigger: CCAGAATGGAAACCGCACAAACCCAGAAGAGTACGCAGGGCCCAAGACTGCTGAGGGCATTGCTGAGTGGCTGAGGCGGCGAGTGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS GCA 72 bp | CCACAGCTGACTCAGCCGCCAGCAGGGCAGCCGCCTTaGTGTACTCGGGAGCTAGTTCTTTGCAGTGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: PQLTQPPAGQPP*CTRELVLCSDH Trigger: GTGGTCACTGCAAAGAACTAGCTCCCGAGTACAGCAAGGCGGCTGCCCTGCTGGCGGCTGAGTCAGCTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS GCA 72 bp | CAGCTCCTCCTTGGGACCCAAGGTGGAATTGGCTTGTaGTTCTGGGGCAGAGGCTGCAGGCTCCTTGGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QLLLGTQGGIGL*FWGRGCRLLGF Trigger: GAACCCAAGGAGCCTGCAGCCTCTGCCCCAGAAGCACAAGCCAATTCCACCTTGGGTCCCAAGGAGGAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000148134.8 |
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| CDS CCA 72 bp | CTCCTTGGGACCCAAGGTGGAATTGGCTTGTGCTTCTaGGGCAGAGGCTGCAGGCTCCTTGGGTTCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLGTQGGIGLCF*GRGCRLLGFLL Trigger: AAGGAGGAACCCAAGGAGCCTGCAGCCTCTGCCCCAGAAGCACAAGCCAATTCCACCTTGGGTCCCAAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000148134.8 |
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| CDS CAA 90 bp | GCCAGGCTCAGGGTTCGGTGGTTCAAGACCAAGATACCATCCTCCTaGGGGACTTCTTCCCCAGTGGGCTCCTCAGGGAGCACCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ARLRVRWFKTKIPSS*GTSSPVGSSGSTSE Trigger: TTCAGAGGTGCTCCCTGAGGAGCCCACTGGGGAAGAAGTCCCCAAGGAGGATGGTATCTTGGTCTTGAACCACCGAACCCTGAGCCTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS GCA 72 bp | CAGCCACTCAGCAATGCCCTCAGCAGTCTTGGGCCCTaGGTACTCTTCTGGGTTTGTGCGGTTTCCATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QPLSNALSSLGP*VLFWVCAVSIL Trigger: CAGAATGGAAACCGCACAAACCCAGAAGAGTACGCAGGGCCCAAGACTGCTGAGGGCATTGCTGAGTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CCA 72 bp | GCTGAATGCTCCTGCAGTGCCAGGCTCAGGGTTCGGTaGTTCAAGACCAAGATACCATCCTCCTTGGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: AECSCSARLRVR*FKTKIPSSLGT Trigger: AGTCCCCAAGGAGGATGGTATCTTGGTCTTGAACCACCGAACCCTGAGCCTGGCACTGCAGGAGCATTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS GCA 72 bp | GACAATGTCCTCACGATCCTTGTACTTCTCTGCCAATaGCTCCCAGGCTGGAGCCATCTCCTTGCAGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: DNVLTILVLLCQ*LPGWSHLLAVA Trigger: AGCCACTGCAAGGAGATGGCTCCAGCCTGGGAGGCATTGGCAGAGAAGTACAAGGATCGTGAGGACATTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000148134.8 |
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| CDS CAA 72 bp | GCATCCAACTCGGCAATGACAATGTCCTCACGATCCTaGTACTTCTCTGCCAATGCCTCCCAGGCTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ASNSAMTMSSRS*YFSANASQAGA Trigger: GGCTCCAGCCTGGGAGGCATTGGCAGAGAAGTACAAGGATCGTGAGGACATTGTCATTGCCGAGTTGGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000148134.8 |
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| CDS GCA 72 bp | GAAGCCAATGACCACCATATCCCATTTGGCCATCAGTaGCTGGACACCTTCCTCATCCTCCAGATGTGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EANDHHIPFGHQ*LDTFLILQMCG Trigger: GCCACACATCTGGAGGATGAGGAAGGTGTCCAGGCACTGATGGCCAAATGGGATATGGTGGTCATTGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS GCA 72 bp | CATTACGAACAACACCTGCCCCCTGAATGGAGGAGCTaGCTCTCTGAAGTCTGTCAGCAGTTCCCTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: HYEQHLPPEWRS*LSEVCQQFPVL Trigger: CAACACAGGGAACTGCTGACAGACTTCAGAGAGGCAGCTCCTCCATTCAGGGGGCAGGTGTTGTTCGTAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS GCA 72 bp | TTGTCAGCAGCCACATCCACCATTACGAACAACACCTaGCCCCTGAATGGAGGAGCTGCCTCTCTGAAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSAATSTITNNT*PLNGGAASLKS Trigger: AGACTTCAGAGAGGCAGCTCCTCCATTCAGGGGGCAGGTGTTGTTCGTAATGGTGGATGTGGCTGCTGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS GCA 72 bp | GGCAATGACAATGTCCTCACGATCCTTGTACTTCTCTaGCAATGCCTCCCAGGCTGGAGCCATCTCCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GNDNVLTILVLL*QCLPGWSHLLA Trigger: TGCAAGGAGATGGCTCCAGCCTGGGAGGCATTGGCAGAGAAGTACAAGGATCGTGAGGACATTGTCATTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000148134.8 |
||
| CDS CCA 72 bp | CACATCCACCATTACGAACAACACCTGCCCCCTGAATaGAGGAGCTGCCTCTCTGAAGTCTGTCAGCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HIHHYEQHLPPE*RSCLSEVCQQF Trigger: GAACTGCTGACAGACTTCAGAGAGGCAGCTCCTCCATTCAGGGGGCAGGTGTTGTTCGTAATGGTGGATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
||
| CDS CAA 72 bp | ACCCCTGTAGGTGCATACTTCTTGGTAGTCTCAACATaGATCAGACGCAGGGTGGGGGCTTCCTCAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TPVGAYFLVVST*IRRRVGASSAL Trigger: CAAGGCTGAGGAAGCCCCCACCCTGCGTCTGATCAATGTTGAGACTACCAAGAAGTATGCACCTACAGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
||
| CDS GCA 72 bp | CATGTCCAGGGCATCCTTGGCCAAGGCCAGGAAAGTTaGCATATCCTTTCCCTGAAAGAAGCCAATGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: HVQGILGQGQES*HILSLKEANDH Trigger: GTGGTCATTGGCTTCTTTCAGGGAAAGGATATGGCAACTTTCCTGGCCTTGGCCAAGGATGCCCTGGACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120333.8 |
||
| CDS CCA 72 bp | AATGCCCTCAGCAGTCTTGGGCCCTGCGTACTCTTCTaGGTTTGTGCGGTTTCCATTCTGGAAGAACTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NALSSLGPCVLF*VCAVSILEELE Trigger: CTCAAGTTCTTCCAGAATGGAAACCGCACAAACCCAGAAGAGTACGCAGGGCCCAAGACTGCTGAGGGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
||
| CDS CAA 72 bp | GCAGTGATGGCTATCACCCCTGTAGGTGCATACTTCTaGGTAGTCTCAACATTGATCAGACGCAGGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AVMAITPVGAYF*VVSTLIRRRVG Trigger: CCCCACCCTGCGTCTGATCAATGTTGAGACTACCAAGAAGTATGCACCTACAGGGGTGATAGCCATCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
||
| CDS CAA 90 bp | ACAGAAGCTGCAGTGATGGCTATCACCCCTGTAGGTGCATACTTCTaGGTAGTCTCAACATTGATCAGACGCAGGGTGGGGGCTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TEAAVMAITPVGAYF*VVSTLIRRRVGASS Trigger: TGAGGAAGCCCCCACCCTGCGTCTGATCAATGTTGAGACTACCAAGAAGTATGCACCTACAGGGGTGATAGCCATCACTGCAGCTTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
||
| CDS CAA 90 bp | TTAGCTGTAGCATCCAACTCGGCAATGACAATGTCCTCACGATCCTaGTACTTCTCTGCCAATGCCTCCCAGGCTGGAGCCATCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LAVASNSAMTMSSRS*YFSANASQAGAISL Trigger: CAAGGAGATGGCTCCAGCCTGGGAGGCATTGGCAGAGAAGTACAAGGATCGTGAGGACATTGTCATTGCCGAGTTGGATGCTACAGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000148134.8 |
||
| CDS TCA 72 bp | CAAAGGTCATGTCCAGGGCATCCTGAAAGAAGCCAATaGCCACCATATCCCATTTGGCCATCAGTGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QRSCPGHPERSQ*PPYPIWPSVPG Trigger: TCCAGGCACTGATGGCCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGGATGCCCTGGACATGACCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142410.2 |
||
| CDS GCA 72 bp | TTAGGTGATGTCTGGCTGTTGAATTCTGTGACCAGGTaGATGCTATGTATGACGAGGAAGCGGGACAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: LGDVWLLNSVTR*MLCMTRKRDRS Trigger: GGACCTGTCCCGCTTCCTCGTCATACATAGCATGCACCTGGTCACAGAATTCAACAGCCAGACATCACCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS CCA 72 bp | TCCTTGGTGAGGCCAAACTTCTCAAAAAGTTGTGGCTaGTCAGTGAAGCCAAAGGTCATGTCCAGGGCATCC | + |
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Preference number: 6 (lower is better) Translates to: SLVRPNFSKSCG*SVKPKVMSRAS Trigger: GGATGCCCTGGACATGACCTTTGGCTTCACTGACCAGCCACAACTTTTTGAGAAGTTTGGCCTCACCAAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CAA 90 bp | GAAAAGGACCACAGTATCCTTGGTGAGGCCAAACTTCTCAAAAAGTaGTGGCTGGTCAGTGAAGCCAAAGGTCATGTCCAGGGCATCCTG | + |
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Preference number: 6 (lower is better) Translates to: EKDHSILGEAKLLKK*WLVSEAKGHVQGIL Trigger: CAGGATGCCCTGGACATGACCTTTGGCTTCACTGACCAGCCACAACTTTTTGAGAAGTTTGGCCTCACCAAGGATACTGTGGTCCTTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142410.2 |
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| CDS CCA 72 bp | CCTGCGTACTCTTCTGGGTTTGTGCGGTTTCCATTCTaGAAGAACTTGAGTGTAGGGTACCCTACCACTTCA | + |
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Preference number: 6 (lower is better) Translates to: PAYSSGFVRFPF*KNLSVGYPTTS Trigger: TGAAGTGGTAGGGTACCCTACACTCAAGTTCTTCCAGAATGGAAACCGCACAAACCCAGAAGAGTACGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CAA 72 bp | GTCTGGTTCACAAACAGCAGCAGGTGGTTGAGGATCTaGGCTGCAAAGATCTTAGGTGATGTCTGGCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: VWFTNSSRWLRI*AAKILGDVWLL Trigger: CAACAGCCAGACATCACCTAAGATCTTTGCAGCCAAGATCCTCAACCACCTGCTGCTGTTTGTGAACCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS CAA 90 bp | GAAAAGGACCACAGTATCCTTGGTGAGGCCAAACTTCTCAAAAAGTaGTGGCTGGTCAGTGAAGCCAAAGGTCATGTCCAGGGCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: EKDHSILGEAKLLKK*WLVSEAKGHVQGIL Trigger: AAGGATGCCCTGGACATGACCTTTGGCTTCACTGACCAGCCACAACTTTTTGAGAAGTTTGGCCTCACCAAGGATACTGTGGTCCTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS CAA 90 bp | TCGGCCCGACCCTCATCAAACTTCTTGAAAAGGACCACAGTATCCTaGGTGAGGCCAAACTTCTCAAAAAGTTGTGGCTGGTCAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SARPSSNFLKRTTVS*VRPNFSKSCGWSVK Trigger: CTTCACTGACCAGCCACAACTTTTTGAGAAGTTTGGCCTCACCAAGGATACTGTGGTCCTTTTCAAGAAGTTTGATGAGGGTCGGGCCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CAA 90 bp | TGGTTGAGGATCTTGGCTGCAAAGATCTTAGGTGATGTCTGGCTGTaGAATTCTGTGACCAGGTGCATGCTATGTATGACGAGGAAGCGG | + |
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Preference number: 6 (lower is better) Translates to: WLRILAAKILGDVWL*NSVTRCMLCMTRKR Trigger: CCGCTTCCTCGTCATACATAGCATGCACCTGGTCACAGAATTCAACAGCCAGACATCACCTAAGATCTTTGCAGCCAAGATCCTCAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS TCA 72 bp | CCATATCCTTTCCCTGTAGATCCTGAAAGAAGCCAATaGCCACCATATCCCATTTGGCCATCAGTGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PYPFPVDPERSQ*PPYPIWPSVPG Trigger: TCCAGGCACTGATGGCCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGGATCTACAGGGAAAGGATATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS TCA 72 bp | GCCAGGAAAGTTGCCATATCCTTTCCCTGTAGATCCTaGAAGAAGCCAATGACCACCATATCCCATTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: ARKVAISFPCRS*KKPMTTISHLA Trigger: GGCCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGGATCTACAGGGAAAGGATATGGCAACTTTCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039113.14 |
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| CDS TCA 72 bp | GGAAAGTTGCCATATCCTTTCCCTGAAAGAAGCCAATaGCCACCATATCCCATTTGGCCATCAGTGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GKLPYPFPERSQ*PPYPIWPSVPG Trigger: TCCAGGCACTGATGGCCAAATGGGATATGGTGGTCATTGGCTTCTTTCAGGGAAAGGATATGGCAACTTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120333.8 |
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| CDS GCA 72 bp | CACAGAAGCTGCAGTGATGGCTATCACCCCTGTAGGTaGATACTTCTTGGTAGTCTCAACATTGATCAGACG | + |
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Preference number: 6 (lower is better) Translates to: HRSCSDGYHPCR*ILLGSLNIDQT Trigger: CGTCTGATCAATGTTGAGACTACCAAGAAGTATGCACCTACAGGGGTGATAGCCATCACTGCAGCTTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS CAA 72 bp | CACAGTATCCTTGGTGAGGCCAAACTTCTCAAAAAGTaGTGGCTGGTCAGTGAAGCCAAAGGTCATGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: HSILGEAKLLKK*WLVSEAKGHVQ Trigger: CTGGACATGACCTTTGGCTTCACTGACCAGCCACAACTTTTTGAGAAGTTTGGCCTCACCAAGGATACTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CCA 72 bp | TTGAGGATCTTGGCTGCAAAGATCTTAGGTGATGTCTaGCTGTTGAATTCTGTGACCAGGTGCATGCTATGT | + |
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Preference number: 6 (lower is better) Translates to: LRILAAKILGDV*LLNSVTRCMLC Trigger: ACATAGCATGCACCTGGTCACAGAATTCAACAGCCAGACATCACCTAAGATCTTTGCAGCCAAGATCCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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| CDS CAA 72 bp | CCCTCATCAAACTTCTTGAAAAGGACCACAGTATCCTaGGTGAGGCCAAACTTCTCAAAAAGTTGTGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PSSNFLKRTTVS*VRPNFSKSCGW Trigger: CCAGCCACAACTTTTTGAGAAGTTTGGCCTCACCAAGGATACTGTGGTCCTTTTCAAGAAGTTTGATGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 ENSMUST00000142410.2 |
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| CDS CAA 72 bp | ATCTTGGCTGCAAAGATCTTAGGTGATGTCTGGCTGTaGAATTCTGTGACCAGGTGCATGCTATGTATGACG | + |
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Preference number: 6 (lower is better) Translates to: ILAAKILGDVWL*NSVTRCMLCMT Trigger: CGTCATACATAGCATGCACCTGGTCACAGAATTCAACAGCCAGACATCACCTAAGATCTTTGCAGCCAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039113.14 ENSMUST00000120333.8 |
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