Pregenerated sensors for PDHA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047674Ensembl transcript IDs: ENSMUST00000057860.3
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCGTCAGAGATTGGACATaGAGGGGGAAAGGGGAACAT | + |
|
Preference number: 2 (lower is better) Translates to: ESYLGGKINHRGQREGGTVRDWT*RGKGEH Trigger: ATGTTCCCCTTTCCCCCTCCATGTCCAATCTCTGAC...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| 3UTR-3UTR CAA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCGGGGCGGGGACAGAATaGAAACCATCCTCCTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: ESYLGGKINHRGQREGGTGAGTE*KPSSSL Trigger: AAGTGAGGAGGATGGTTTCAATTCTGTCCCCGCCCC...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| 3UTR-3UTR CAA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCTCCTCCTTAACAAAGTaGAAGTTTCCTAGAGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: ESYLGGKINHRGQREGGTSSLTK*KFPRVH Trigger: GTGTACTCTAGGAAACTTCAACTTTGTTAAGGAGGA...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCCGTGGGATTTATCCCTaGCTCCAGCCCCACGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTRGIYP*LQPHAA Trigger: TGCTGCGTGGGGCTGGAGGCAGGGATAAATCCCACG...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCCCTGGGCCCCAACAATaGCATTGCCACCGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTPGPQQ*HCHRRS Trigger: ACTTCTACGGTGGCAATGGCATTGTTGGGGCCCAGG...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR CCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCGCAGCTCCATCACAATaGGCCCCTTTCCAGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTAAPSQ*APFQIC Trigger: GCAGATCTGGAAAGGGGCCCATTGTGATGGAGCTGC...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR TCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCGGAGAACTTCAGAGATaGCAGCAGTCCTCTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTGELQR*QQSSES Trigger: GCTCTCAGAGGACTGCTGTCATCTCTGAAGTTCTCC...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCTTCTTGCCGTACATGTaGATGGAGCCTCCCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTFLPYM*MEPPLP Trigger: AGGCAAGGGAGGCTCCATGCACATGTACGGCAAGAA...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCTCTGCAGTGATCAGCTaGAAACTTGGTTGCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTSAVIS*KLGCLP Trigger: CGGGAGGCAACCAAGTTTGCAGCTGATCACTGCAGA...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR TCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCTGCCCATCACACAGGTaGCAGAAACCACGGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTCPSHR*QKPRMN Trigger: ATTCATCCGTGGTTTCTGTCACCTGTGTGATGGGCA...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCCCCCAACAATGCCATTaGCACCGTAGAAGTTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTPQQCH*HRRSSC Trigger: GCAAGAACTTCTACGGTGGCAATGGCATTGTTGGGG...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCGCCCCTTTCCAGATCTaGAGTGATCAGCTGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTAPFQI*SDQLQT Trigger: AGTTTGCAGCTGATCACTGCAGATCTGGAAAGGGGC...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCCGTAGCAAACTGAGCTaGGTCCTCCACCTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTRSKLS*VLHLFL Trigger: AAGAAAGAGGTGGAGGACGCAGCTCAGTTTGCTACG...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR CCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCACGATAACTGATCCCTaGGTCGCTCATACTGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTTITDP*VAHTVS Trigger: GGACACAGTATGAGCGACCCAGGGATCAGTTATCGT...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR TCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCTGTGGGACTTATACTTaGGCCACTTATGTGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTCGTYT*ATYVHH Trigger: GTGGTGCACATAAGTGGCTCAAGTATAAGTCCCACA...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR CCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCTTCTGCTTATACAGCTaGTCGGCCTTCAACTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTFCLYS*SAFNSM Trigger: CATGGAGTTGAAGGCCGACCAGCTGTATAAGCAGAA...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR TCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCTTTCCAGATCTGCAGTaGTCAGCTGCAAACTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTFPDLQ*SAANLV Trigger: AACCAAGTTTGCAGCTGATCACTGCAGATCTGGAAA...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR TCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCATGAACTTCTTCTCGTaGACGATAACTGATCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTMNFFS*TITDPW Trigger: CCAGGGATCAGTTATCGTTCACGAGAAGAAGTTCAT...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR TCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCGACAGAAACCACGGATaGATTTCTGCTTATACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTDRNHG*ISAYTA Trigger: AGCTGTATAAGCAGAAATTCATCCGTGGTTTCTGTC...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR TCA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCAAAGCCAAGCAGACCTaGCCATTCTTCAGGTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: ESYLGGKINHRGQREGGTKAKQT*PFFRYL Trigger: TAAATACCTGAAGAATGGTCAGGTCTGCTTGGCTTT...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| 3UTR CAA 72 bp | CTGCAATGTCGTTTTATTTATTCCTCCTTAACAAAGTaGAAGTTTCCTAGAGTACACCATAAATGTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LQCRFIYSSLTK*KFPRVHHKCPT Trigger: AGTGGGACATTTATGGTGTACTCTAGGAAACTTCAACTTTGTTAAGGAGGAATAAATAAAACGACATTGCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR CAA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCTTAGCACAGCCTCCTTaGCGTCCAGTCAGCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ESYLGGKINHRGQREGGTLAQPP*RPVSSA Trigger: CGCCGAGCTGACTGGACGCAAAGGAGGCTGTGCTAA...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS GCA 90 bp | AATGGGCCCCTTTCCAGATCTGCAGTGATCAGCTGCAAACTTGGTTaGCTCCCGAACACAGAGAATATCCATCCCATTCACCCTCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NGPLSRSAVISCKLG*LPNTENIHPIHPQS Trigger: GGACTGAGGGTGAATGGGATGGATATTCTCTGTGTTCGGGAGGCAACCAAGTTTGCAGCTGATCACTGCAGATCTGGAAAGGGGCCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS GCA 90 bp | CAGCTCCATCACAATGGGCCCCTTTCCAGATCTGCAGTGATCAGCTaGAAACTTGGTTGCCTCCCGAACACAGAGAATATCCATCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: QLHHNGPLSRSAVIS*KLGCLPNTENIHPI Trigger: AATGGGATGGATATTCTCTGTGTTCGGGAGGCAACCAAGTTTGCAGCTGATCACTGCAGATCTGGAAAGGGGCCCATTGTGATGGAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CCA 90 bp | TCACAATGGGCCCCTTTCCAGATCTGCAGTGATCAGCTGCAAACTTaGTTGCCTCCCGAACACAGAGAATATCCATCCCATTCACCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQWAPFQICSDQLQT*LPPEHREYPSHSPS Trigger: TGAGGGTGAATGGGATGGATATTCTCTGTGTTCGGGAGGCAACCAAGTTTGCAGCTGATCACTGCAGATCTGGAAAGGGGCCCATTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CCA 90 bp | AGGTGGATCTTGGTGGTAGAGGTAATTGGCTATATCTTCCACAGCTaGTTCTGGATCAGTCGTAGCAAACTGAGCTGCGTCCTCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: RWILVVEVIGYIFHS*FWISRSKLSCVLHL Trigger: GAGGTGGAGGACGCAGCTCAGTTTGCTACGACTGATCCAGAACCAGCTGTGGAAGATATAGCCAATTACCTCTACCACCAAGATCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR CAA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCCACAAGGCTGACATATaGTATGCTTCGAATACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ESYLGGKINHRGQREGGTHKADI*YASNTC Trigger: GCAGGTATTCGAAGCATACAATATGTCAGCCTTGTG...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS TCA 90 bp | ACATTTCTTAATGTCACAGGTGGCGTCGTTGGAGAACTTCAGAGATaGCAGCAGTCCTCTGAGAGCTGGCTTTTGGACCATTCCCGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: TFLNVTGGVVGELQR*QQSSESWLLDHSRK Trigger: TTTTCGGGAATGGTCCAAAAGCCAGCTCTCAGAGGACTGCTGTCATCTCTGAAGTTCTCCAACGACGCCACCTGTGACATTAAGAAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CCA 90 bp | ATCTTGGTGGTAGAGGTAATTGGCTATATCTTCCACAGCTGGTTCTaGATCAGTCGTAGCAAACTGAGCTGCGTCCTCCACCTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILVVEVIGYIFHSWF*ISRSKLSCVLHLFL Trigger: AAGAAAGAGGTGGAGGACGCAGCTCAGTTTGCTACGACTGATCCAGAACCAGCTGTGGAAGATATAGCCAATTACCTCTACCACCAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR CAA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCATATTGCTGAGGTTGTaGCTGATAATTCTCTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ESYLGGKINHRGQREGGTILLRL*LIILSR Trigger: CCGAGAGAGAATTATCAGCAACAACCTCAGCAATAT...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS TCA 90 bp | TTGGCTATATCTTCCACAGCTGGTTCTGGATCAGTCGTAGCAAACTaGGCTGCGTCCTCCACCTCTTTCTTCACATCTGCATCAATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAISSTAGSGSVVAN*AASSTSFFTSASIS Trigger: AGAAATTGATGCAGATGTGAAGAAAGAGGTGGAGGACGCAGCTCAGTTTGCTACGACTGATCCAGAACCAGCTGTGGAAGATATAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CCA 90 bp | GGACTTATACTTGAGCCACTTATGTGCACCACGGACTTCAAAAGGTaGATCTTGGTGGTAGAGGTAATTGGCTATATCTTCCACAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GLILEPLMCTTDFKR*ILVVEVIGYIFHSW Trigger: CCAGCTGTGGAAGATATAGCCAATTACCTCTACCACCAAGATCCACCTTTTGAAGTCCGTGGTGCACATAAGTGGCTCAAGTATAAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS-3UTR CAA 90 bp | GAATCCTACTTAGGAGGAAAAATCAACCACAGGGGACAGAGGGAGGGAGGAACCTCAATATTGCTGAGGTaGTTGCTGATAATTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESYLGGKINHRGQREGGTSILLR*LLIILS Trigger: AGAGAGAATTATCAGCAACAACCTCAGCAATATTGA...GGTTCCTCCCTCCCTCTGTCCCCTGTGGTTGATTTTTCCTCCTAAGTAGGATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS GCA 90 bp | TATATCTTCCACAGCTGGTTCTGGATCAGTCGTAGCAAACTGAGCTaGGTCCTCCACCTCTTTCTTCACATCTGCATCAATTTCTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: YIFHSWFWISRSKLS*VLHLFLHICINFFQ Trigger: TTGAAAGAAATTGATGCAGATGTGAAGAAAGAGGTGGAGGACGCAGCTCAGTTTGCTACGACTGATCCAGAACCAGCTGTGGAAGATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CAA 90 bp | CAATGGGCCCCTTTCCAGATCTGCAGTGATCAGCTGCAAACTTGGTaGCCTCCCGAACACAGAGAATATCCATCCCATTCACCCTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: QWAPFQICSDQLQTW*PPEHREYPSHSPSV Trigger: GACTGAGGGTGAATGGGATGGATATTCTCTGTGTTCGGGAGGCAACCAAGTTTGCAGCTGATCACTGCAGATCTGGAAAGGGGCCCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CAA 90 bp | TCCAGCCGGTACAGGTCACATTTCTTAATGTCACAGGTGGCGTCGTaGGAGAACTTCAGAGATGACAGCAGTCCTCTGAGAGCTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSRYRSHFLMSQVAS*ENFRDDSSPLRAGF Trigger: AAAGCCAGCTCTCAGAGGACTGCTGTCATCTCTGAAGTTCTCCAACGACGCCACCTGTGACATTAAGAAATGTGACCTGTACCGGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS TCA 72 bp | AATGTCACAGGTGGCGTCGTTGGAGAACTTCAGAGATaGCAGCAGTCCTCTGAGAGCTGGCTTTTGGACCAT | + |
|
Preference number: 6 (lower is better) Translates to: NVTGGVVGELQR*QQSSESWLLDH Trigger: ATGGTCCAAAAGCCAGCTCTCAGAGGACTGCTGTCATCTCTGAAGTTCTCCAACGACGCCACCTGTGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS TCA 72 bp | TCTTCCACAGCTGGTTCTGGATCAGTCGTAGCAAACTaGGCTGCGTCCTCCACCTCTTTCTTCACATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSTAGSGSVVAN*AASSTSFFTSA Trigger: TGCAGATGTGAAGAAAGAGGTGGAGGACGCAGCTCAGTTTGCTACGACTGATCCAGAACCAGCTGTGGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS GCA 72 bp | TTCCACAAGGCTGACATATTGTATGCTTCGAATACCTaGCCTTGGTTAGCCGCACCATCGCCGTACAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: FHKADILYASNT*PWLAAPSPYKA Trigger: GGCTTTGTACGGCGATGGTGCGGCTAACCAAGGGCAGGTATTCGAAGCATACAATATGTCAGCCTTGTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS GCA 72 bp | CACAATGGGCCCCTTTCCAGATCTGCAGTGATCAGCTaGAAACTTGGTTGCCTCCCGAACACAGAGAATATC | + |
|
Preference number: 6 (lower is better) Translates to: HNGPLSRSAVIS*KLGCLPNTENI Trigger: GATATTCTCTGTGTTCGGGAGGCAACCAAGTTTGCAGCTGATCACTGCAGATCTGGAAAGGGGCCCATTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CCA 72 bp | AAGGCTGACATATTGTATGCTTCGAATACCTGCCCTTaGTTAGCCGCACCATCGCCGTACAAAGCCAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KADILYASNTCP*LAAPSPYKAKQ Trigger: CTGCTTGGCTTTGTACGGCGATGGTGCGGCTAACCAAGGGCAGGTATTCGAAGCATACAATATGTCAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CCA 72 bp | GCCCCTTTCCAGATCTGCAGTGATCAGCTGCAAACTTaGTTGCCTCCCGAACACAGAGAATATCCATCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: APFQICSDQLQT*LPPEHREYPSH Trigger: ATGGGATGGATATTCTCTGTGTTCGGGAGGCAACCAAGTTTGCAGCTGATCACTGCAGATCTGGAAAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS TCA 72 bp | CGTCGTTGGAGAACTTCAGAGATGACAGCAGTCCTCTaGGAGCTGGCTTTTGGACCATTCCCGAAAATACGT | + |
|
Preference number: 6 (lower is better) Translates to: RRWRTSEMTAVL*ELAFGPFPKIR Trigger: ACGTATTTTCGGGAATGGTCCAAAAGCCAGCTCTCAGAGGACTGCTGTCATCTCTGAAGTTCTCCAACGACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS TCA 72 bp | TTAGCCGCACCATCGCCGTACAAAGCCAAGCAGACCTaGCCATTCTTCAGGTATTTACAGGCAAAAGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LAAPSPYKAKQT*PFFRYLQAKAT Trigger: TGTGGCTTTTGCCTGTAAATACCTGAAGAATGGTCAGGTCTGCTTGGCTTTGTACGGCGATGGTGCGGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS GCA 72 bp | CACAGCTGGTTCTGGATCAGTCGTAGCAAACTGAGCTaGGTCCTCCACCTCTTTCTTCACATCTGCATCAAT | + |
|
Preference number: 6 (lower is better) Translates to: HSWFWISRSKLS*VLHLFLHICIN Trigger: ATTGATGCAGATGTGAAGAAAGAGGTGGAGGACGCAGCTCAGTTTGCTACGACTGATCCAGAACCAGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CCA 72 bp | GTAGAGGTAATTGGCTATATCTTCCACAGCTGGTTCTaGATCAGTCGTAGCAAACTGAGCTGCGTCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VEVIGYIFHSWF*ISRSKLSCVLH Trigger: GTGGAGGACGCAGCTCAGTTTGCTACGACTGATCCAGAACCAGCTGTGGAAGATATAGCCAATTACCTCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS GCA 72 bp | CTTTCCAGATCTGCAGTGATCAGCTGCAAACTTGGTTaGCTCCCGAACACAGAGAATATCCATCCCATTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LSRSAVISCKLG*LPNTENIHPIH Trigger: GTGAATGGGATGGATATTCTCTGTGTTCGGGAGGCAACCAAGTTTGCAGCTGATCACTGCAGATCTGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CCA 72 bp | TTGGTGGTAGAGGTAATTGGCTATATCTTCCACAGCTaGTTCTGGATCAGTCGTAGCAAACTGAGCTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LVVEVIGYIFHS*FWISRSKLSCV Trigger: GACGCAGCTCAGTTTGCTACGACTGATCCAGAACCAGCTGTGGAAGATATAGCCAATTACCTCTACCACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CAA 72 bp | CCTTTCCAGATCTGCAGTGATCAGCTGCAAACTTGGTaGCCTCCCGAACACAGAGAATATCCATCCCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: PFQICSDQLQTW*PPEHREYPSHS Trigger: TGAATGGGATGGATATTCTCTGTGTTCGGGAGGCAACCAAGTTTGCAGCTGATCACTGCAGATCTGGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CAA 90 bp | ATACTTGAGCCACTTATGTGCACCACGGACTTCAAAAGGTGGATCTaGGTGGTAGAGGTAATTGGCTATATCTTCCACAGCTGGTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILEPLMCTTDFKRWI*VVEVIGYIFHSWFW Trigger: CCAGAACCAGCTGTGGAAGATATAGCCAATTACCTCTACCACCAAGATCCACCTTTTGAAGTCCGTGGTGCACATAAGTGGCTCAAGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CAA 72 bp | TACAGGTCACATTTCTTAATGTCACAGGTGGCGTCGTaGGAGAACTTCAGAGATGACAGCAGTCCTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: YRSHFLMSQVAS*ENFRDDSSPLR Trigger: TCTCAGAGGACTGCTGTCATCTCTGAAGTTCTCCAACGACGCCACCTGTGACATTAAGAAATGTGACCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CAA 72 bp | CCACTTATGTGCACCACGGACTTCAAAAGGTGGATCTaGGTGGTAGAGGTAATTGGCTATATCTTCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PLMCTTDFKRWI*VVEVIGYIFHS Trigger: GCTGTGGAAGATATAGCCAATTACCTCTACCACCAAGATCCACCTTTTGAAGTCCGTGGTGCACATAAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CCA 72 bp | CTTGAGCCACTTATGTGCACCACGGACTTCAAAAGGTaGATCTTGGTGGTAGAGGTAATTGGCTATATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LEPLMCTTDFKR*ILVVEVIGYIF Trigger: GAAGATATAGCCAATTACCTCTACCACCAAGATCCACCTTTTGAAGTCCGTGGTGCACATAAGTGGCTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||
| CDS CAA 72 bp | GCATCAATTTCTTTCAATTCTTCAATATTGCTGAGGTaGTTGCTGATAATTCTCTCTCGGAGCAGCATTATA | + |
|
Preference number: 6 (lower is better) Translates to: ASISFNSSILLR*LLIILSRSSII Trigger: TATAATGCTGCTCCGAGAGAGAATTATCAGCAACAACCTCAGCAATATTGAAGAATTGAAAGAAATTGATGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057860.3 |
||