RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDGFRL (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031595

Ensembl transcript IDs: ENSMUST00000034004.10

Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp TTCGGATGTCTGTCTGACCCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGAGCTGTGTGTGCAGATaGGCATCCCATTGGTCCACT +
Preference number: 2 (lower is better)
Translates to: FGCLSDPLAGVGPWPPIKSCVCR*ASHWST
Trigger: AGTGGACCAATGGGATGCCCATCTGCACACACAGCT...CTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGGGTCAGACAGACATCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
3UTR CCA 72 bp GGATGTCTGTCTGACCCACTGGCAGGGGTTGGTCCTTaGCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCA +
Preference number: 3 (lower is better)
Translates to: GCLSDPLAGVGP*PPIKHLEAVCA
Trigger: TGCACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGGGTCAGACAGACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
3UTR CCA 72 bp GCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCAGATaGGCATCCCATTGGTCCACTACTCTTCACTTTCCA +
Preference number: 3 (lower is better)
Translates to: ASYKAPGSCVCR*ASHWSTTLHFP
Trigger: TGGAAAGTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGCTTTATAGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR GCA 90 bp GCACCTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTTCACCCCCGGCTTCCGCTTTaGAGTAGACCACACCCTGGT +
Preference number: 4 (lower is better)
Translates to: APGSCVCRWASHWSTTLHPRLPL*SRPHPG
Trigger: ACCAGGGTGTGGTCTACTGCAAAGCGGAAGCCGGGG...GTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp TCTGACCCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGCGGGAAACTCCCTGTaGAGCGTGACTTTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SDPLAGVGPWPPIKHLEAAGNSL*SVTLAD
Trigger: GTCAGCCAAAGTCACGCTCCACAGGGAGTTTCCCGC...AGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGGGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR TCA 90 bp CTGTCTGACCCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGGCCAAGATGGTTGTTaGTGGAGGGCCACTAGGAAC +
Preference number: 4 (lower is better)
Translates to: LSDPLAGVGPWPPIKHLEGQDGC*WRATRN
Trigger: GTTCCTAGTGGCCCTCCATCAACAACCATCTTGGCC...TTCCAGGTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGGGTCAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR GCA 90 bp CCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGTGTGTCCGTTGCCCATCGCTTaGATCATGATGGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: PLAGVGPWPPIKHLEAVCPLPIA*IMMDWL
Trigger: GAGCCAGTCCATCATGATGCAAGCGATGGGCAACGG...ACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR GCA 90 bp GGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCACTGAGATCTGAGACTTaGCCCCGGCTTCCGCTTTGC +
Preference number: 4 (lower is better)
Translates to: GWSLASYKAPGSCVCRWALRSET*PRLPLC
Trigger: GCAAAGCGGAAGCCGGGGGCAAGTCTCAGATCTCAG...TGCCCATCTGCACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp GGGGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGAGTCTCCAGGTGTCCTaGATGGTCACAGGCCTTTCG +
Preference number: 4 (lower is better)
Translates to: GVGPWPPIKHLEAVCADGSLQVS*MVTGLS
Trigger: CGAAAGGCCTGTGACCATCCAGGACACCTGGAGACT...CCCATCTGCACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR TCA 90 bp GAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTTCACTTTCCAACGGCCGCGGTGGAGTTaGCCAGAGTCAACTGCCCAT +
Preference number: 4 (lower is better)
Translates to: EAVCADGHPIGPLLFTFQRPRWS*PESTAH
Trigger: ATGGGCAGTTGACTCTGGTCAACTCCACCGCGGCCG...TTGGAAAGTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR TCA 90 bp TATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTACTCCCTGTGGAGCGTaGCTTTGGCTGACGGGGCTG +
Preference number: 4 (lower is better)
Translates to: YKAPGSCVCRWASHWSTTTPCGA*LWLTGL
Trigger: CAGCCCCGTCAGCCAAAGTCACGCTCCACAGGGAGT...AGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGCTTTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR GCA 90 bp CTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCATGCAGATGTAGCCATTaGACAGTTGCTCCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LAGVGPWPPIKHLEAVCACRCSH*TVAPSS
Trigger: GCTGCTGGGAGCAACTGTGCAATGGCTACATCTGCA...TGCACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp CTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTTCACTTTCCCAGGAGACTCACTGTaGCAGCAGGCCTCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LEAVCADGHPIGPLLFTFPGDSL*QQASGS
Trigger: GCTTCCAGAGGCCTGCTGCCACAGTGAGTCTCCTGG...GAAAGTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp GGATGTCTGTCTGACCCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACTTGCGGTTGAGTCAGTaGAGTCCCTGTCCTTTACCT +
Preference number: 4 (lower is better)
Translates to: GCLSDPLAGVGPWPPIKHLRLSQ*SPCPLP
Trigger: AGGTAAAGGACAGGGACTCCACTGACTCAACCGCAA...GTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGGGTCAGACAGACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp ATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTCCAGGTGTCCTGGATaGTCACAGGCCTTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: IKHLEAVCADGHPIGPLLSRCPG*SQAFRP
Trigger: AGGACGAAAGGCCTGTGACCATCCAGGACACCTGGA...GAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGCTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR TCA 90 bp GCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCGCTCTCCTTTCTCTGTaGAGAAGATATAGGTGGAGC +
Preference number: 4 (lower is better)
Translates to: ASYKAPGSCVCRWASHWSALLSL*RRYRWS
Trigger: GCTCCACCTATATCTTCTTCACAGAGAAAGGAGAGC...GGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGCTTTATAGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR TCA 90 bp GCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCAGAGCAGCTGATACTTaGCTGAGATCTGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: ASYKAPGSCVCRWASHWSRAADT*LRSETC
Trigger: GCAAGTCTCAGATCTCAGTCAAGTATCAGCTGCTCT...GGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGCTTTATAGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR GCA 90 bp ATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCCGTAGCTCTAGAGTTTaGCCTGCCAGGAGACTCACT +
Preference number: 4 (lower is better)
Translates to: IKHLEAVCADGHPIGPLLRSSRV*PARRLT
Trigger: AGTGAGTCTCCTGGCAGGGCAAACTCTAGAGCTACG...GAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGCTTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR GCA 90 bp GGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCAGGAGATTCTGAGCTGTaGATATGTAGTAGCCCGCAT +
Preference number: 4 (lower is better)
Translates to: GWSLASYKAPGSCVCRWAGDSEL*ICSSPH
Trigger: ATGCGGGCTACTACATATGCACAGCTCAGAATCTCC...TGCCCATCTGCACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp GGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCAAGGAAAACTCAACAGTaGTCGCTACTGTGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: GWSLASYKAPGSCVCRWARKTQQ*SLLWSV
Trigger: GACAGACCACAGTAGCGACCACTGTTGAGTTTTCCT...TGCCCATCTGCACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR GCA 90 bp CTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTTCACTTTCATCCTGTTTTCTCCCTaGTCCTTTGGACGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LEAVCADGHPIGPLLFTFILFSP*SFGRLF
Trigger: GAACAAGCGTCCAAAGGAGCAGGGAGAAAACAGGAT...GAAAGTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR GCA 90 bp CTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTTCACTTTCCGTACACAATGTCCGTaGCATTGGCAGGGATTTCTT +
Preference number: 4 (lower is better)
Translates to: LEAVCADGHPIGPLLFTFRTQCP*HWQGFL
Trigger: AAGAAATCCCTGCCAATGGCACGGACATTGTGTACG...GAAAGTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp GAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTTCACTTTCCAATTCTCCCTGCTCCTTTaGACGCTTGTTCTTAGGAGA +
Preference number: 4 (lower is better)
Translates to: EAVCADGHPIGPLLFTFQFSLLL*TLVLRR
Trigger: TCTCCTAAGAACAAGCGTCCAAAGGAGCAGGGAGAA...TTGGAAAGTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp TATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTTGCATCATGATGGACTaGCTCTTTGCGGTTGAGTCA +
Preference number: 4 (lower is better)
Translates to: YKAPGSCVCRWASHWSTTCIMMD*LFAVES
Trigger: TGACTCAACCGCAAAGAGCCAGTCCATCATGATGCA...AGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGCTTTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp GAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTTCACTTTCCAAAGTAGCCCGCATCAATaGTCTCAAAGTCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: EAVCADGHPIGPLLFTFQSSPHQ*SQSLPR
Trigger: TCGTGGAAGACTTTGAGACCATTGATGCGGGCTACT...TTGGAAAGTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR TCA 90 bp GAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTTCACTTTCCAATTTTGTTGGTTGGTTTaGTCCTGTTTTCTCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EAVCADGHPIGPLLFTFQFCWLV*SCFLPA
Trigger: AGCAGGGAGAAAACAGGATCAAACCAACCAACAAAA...TTGGAAAGTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CCA 90 bp TATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTACGATAATGACACTCTaGGAGATTCTTGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: YKAPGSCVCRWASHWSTTTIMTL*EILVVC
Trigger: ACACACCACAAGAATCTCCCAGAGTGTCATTATCGT...AGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGCTTTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 90 bp TGGCAGCAGGCCTCTGGAAGCGACCGTTGCCCATCGCTTGCATCATaGTGGACTGGCTCTTTGCGGTTGAGTCAGTGGAGTCCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: WQQASGSDRCPSLAS*WTGSLRLSQWSPCP
Trigger: AGGACAGGGACTCCACTGACTCAACCGCAAAGAGCCAGTCCATCATGATGCAAGCGATGGGCAACGGTCGCTTCCAGAGGCCTGCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS GCA 90 bp CTCACTGTGGCAGCAGGCCTCTGGAAGCGACCGTTGCCCATCGCTTaGATCATGATGGACTGGCTCTTTGCGGTTGAGTCAGTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: LTVAAGLWKRPLPIA*IMMDWLFAVESVES
Trigger: GGACTCCACTGACTCAACCGCAAAGAGCCAGTCCATCATGATGCAAGCGATGGGCAACGGTCGCTTCCAGAGGCCTGCTGCCACAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 90 bp TCTAGAGTTTGCCCTGCCAGGAGACTCACTGTGGCAGCAGGCCTCTaGAAGCGACCGTTGCCCATCGCTTGCATCATGATGGACTGGCTC +
Preference number: 5 (lower is better)
Translates to: SRVCPARRLTVAAGL*KRPLPIACIMMDWL
Trigger: GAGCCAGTCCATCATGATGCAAGCGATGGGCAACGGTCGCTTCCAGAGGCCTGCTGCCACAGTGAGTCTCCTGGCAGGGCAAACTCTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CAA 90 bp GCACCTGGAAGCTGTGTGTGCAGATGGGCATCCCATTGGTCCACTACTCTTCACTCGGCCGCGGTGGAGTaGACCAGAGTCAACTGCCCA +
Preference number: 5 (lower is better)
Translates to: APGSCVCRWASHWSTTLHSAAVE*TRVNCP
Trigger: TGGGCAGTTGACTCTGGTCAACTCCACCGCGGCCGA...GTGAAGAGTAGTGGACCAATGGGATGCCCATCTGCACACACAGCTTCCAGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 90 bp GGATGGTCACAGGCCTTTCGTCCTTCTGCCCAGGAAAGAGCCACCTaGATTCAACCTCCACATCAGGCTCCCCGAGGACAGTGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GWSQAFRPSAQERAT*IQPPHQAPRGQCRA
Trigger: TGCTCTGCACTGTCCTCGGGGAGCCTGATGTGGAGGTTGAATTCAGGTGGCTCTTTCCTGGGCAGAAGGACGAAAGGCCTGTGACCATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 90 bp CCTTACATCGTAGCTCTAGAGTTTGCCCTGCCAGGAGACTCACTGTaGCAGCAGGCCTCTGGAAGCGACCGTTGCCCATCGCTTGCATCA +
Preference number: 5 (lower is better)
Translates to: PYIVALEFALPGDSL*QQASGSDRCPSLAS
Trigger: TGATGCAAGCGATGGGCAACGGTCGCTTCCAGAGGCCTGCTGCCACAGTGAGTCTCCTGGCAGGGCAAACTCTAGAGCTACGATGTAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 90 bp ATGTCCGTGCCATTGGCAGGGATTTCTTTGGCGGGAAACTCCCTGTaGAGCGTGACTTTGGCTGACGGGGCTGTCACTCGACAAGGAACC +
Preference number: 5 (lower is better)
Translates to: MSVPLAGISLAGNSL*SVTLADGAVTRQGT
Trigger: GGTTCCTTGTCGAGTGACAGCCCCGTCAGCCAAAGTCACGCTCCACAGGGAGTTTCCCGCCAAAGAAATCCCTGCCAATGGCACGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CAA 90 bp GGATGTCTGTCTGACCCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACCTCTGGAAGCGACCGTaGCCCATCGCTTGCATCATG +
Preference number: 5 (lower is better)
Translates to: GCLSDPLAGVGPWPPIKHLWKRP*PIACIM
Trigger: CATGATGCAAGCGATGGGCAACGGTCGCTTCCAGAG...GTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGGGTCAGACAGACATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CAA 90 bp GGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCACTGTGGAGCGTGACTTaGGCTGACGGGGCTGTCACT +
Preference number: 5 (lower is better)
Translates to: GWSLASYKAPGSCVCRWALWSVT*ADGAVT
Trigger: AGTGACAGCCCCGTCAGCCAAAGTCACGCTCCACAG...TGCCCATCTGCACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CAA 90 bp CCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGTGTGTTTGGCAGGGATTTCTTaGGCGGGAAACTCCCTGTGG +
Preference number: 5 (lower is better)
Translates to: PLAGVGPWPPIKHLEAVCLAGIS*AGNSLW
Trigger: CCACAGGGAGTTTCCCGCCAAAGAAATCCCTGCCAA...ACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CAA 90 bp GGATGTCTGTCTGACCCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACCACTCTGGGAGATTCTaGTGGTGTGTCCCAGTCCTC +
Preference number: 5 (lower is better)
Translates to: GCLSDPLAGVGPWPPIKHHSGRF*WCVPVL
Trigger: GAGGACTGGGACACACCACAAGAATCTCCCAGAGTG...GTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGGGTCAGACAGACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 90 bp GGCCTCTGGAAGCGACCGTTGCCCATCGCTTGCATCATGATGGACTaGCTCTTTGCGGTTGAGTCAGTGGAGTCCCTGTCCTTTACCTTA +
Preference number: 5 (lower is better)
Translates to: GLWKRPLPIACIMMD*LFAVESVESLSFTL
Trigger: TAAGGTAAAGGACAGGGACTCCACTGACTCAACCGCAAAGAGCCAGTCCATCATGATGCAAGCGATGGGCAACGGTCGCTTCCAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CAA 90 bp GGATGTCTGTCTGACCCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACACAAGGAACCACAGCTaGTCTGTCCGGGTTCAGGTA +
Preference number: 5 (lower is better)
Translates to: GCLSDPLAGVGPWPPIKHTRNHS*SVRVQV
Trigger: TACCTGAACCCGGACAGACAAGCTGTGGTTCCTTGT...GTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGGGTCAGACAGACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 90 bp TGGAGGGCCACTAGGAACCTCTACATAGAGCAGCTGATACTTGACTaGGATCTGAGACTTGCCCCCGGCTTCCGCTTTGCAGTAGACCAC +
Preference number: 5 (lower is better)
Translates to: WRATRNLYIEQLILD*DLRLAPGFRFAVDH
Trigger: GTGGTCTACTGCAAAGCGGAAGCCGGGGGCAAGTCTCAGATCTCAGTCAAGTATCAGCTGCTCTATGTAGAGGTTCCTAGTGGCCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CAA 90 bp GGTTGGTCCTTGGCCTCCTATAAAGCACCTGGAAGCTGTGTGTGCAGATGGGCAACAATGTCCGTGCCATaGGCAGGGATTTCTTTGGCG +
Preference number: 5 (lower is better)
Translates to: GWSLASYKAPGSCVCRWATMSVP*AGISLA
Trigger: CGCCAAAGAAATCCCTGCCAATGGCACGGACATTGT...TGCCCATCTGCACACACAGCTTCCAGGTGCTTTATAGGAGGCCAAGGACCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 90 bp ATAATGACACTCTGGGAGATTCTTGTGGTGTGTCCCAGTCCTCTGTaGATCAGTCTCCAGGTGTCCTGGATGGTCACAGGCCTTTCGTCC +
Preference number: 5 (lower is better)
Translates to: IMTLWEILVVCPSPL*ISLQVSWMVTGLSS
Trigger: GGACGAAAGGCCTGTGACCATCCAGGACACCTGGAGACTGATTCACAGAGGACTGGGACACACCACAAGAATCTCCCAGAGTGTCATTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS-3UTR CAA 90 bp GGATGTCTGTCTGACCCACTGGCAGGGGTTGGTCCTTGGCCTCCTATAAAGCACTTGGGTTTGGCCTTTTaGTTGGTTGGTTTGATCCTG +
Preference number: 5 (lower is better)
Translates to: GCLSDPLAGVGPWPPIKHLGLAF*LVGLIL
Trigger: CAGGATCAAACCAACCAACAAAAAGGCCAAACCCAA...GTGCTTTATAGGAGGCCAAGGACCAACCCCTGCCAGTGGGTCAGACAGACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 90 bp ACCGTTGCCCATCGCTTGCATCATGATGGACTGGCTCTTTGCGGTTaGGTCAGTGGAGTCCCTGTCCTTTACCTTAGGAATCTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: TVAHRLHHDGLALCG*VSGVPVLYLRNLGF
Trigger: AAACCCAAGATTCCTAAGGTAAAGGACAGGGACTCCACTGACTCAACCGCAAAGAGCCAGTCCATCATGATGCAAGCGATGGGCAACGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS GCA 90 bp CAACAGTGGTCGCTACTGTGGTCTGTCCTCGGAGATTCTGAGCTGTaGATATGTAGTAGCCCGCATCAATGGTCTCAAAGTCTTCCACGA +
Preference number: 5 (lower is better)
Translates to: QQWSLLWSVLGDSEL*ICSSPHQWSQSLPR
Trigger: TCGTGGAAGACTTTGAGACCATTGATGCGGGCTACTACATATGCACAGCTCAGAATCTCCGAGGACAGACCACAGTAGCGACCACTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 90 bp GGCCTTTTTGTTGGTTGGTTTGATCCTGTTTTCTCCCTGCTCCTTTaGACGCTTGTTCTTAGGAGAATGCTGACCACCAACATCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GLFVGWFDPVFSLLL*TLVLRRMLTTNIFQ
Trigger: CTGGAAGATGTTGGTGGTCAGCATTCTCCTAAGAACAAGCGTCCAAAGGAGCAGGGAGAAAACAGGATCAAACCAACCAACAAAAAGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 90 bp CCTGTCCTTTACCTTAGGAATCTTGGGTTTGGCCTTTTTGTTGGTTaGTTTGATCCTGTTTTCTCCCTGCTCCTTTGGACGCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: PVLYLRNLGFGLFVG*FDPVFSLLLWTLVL
Trigger: AAGAACAAGCGTCCAAAGGAGCAGGGAGAAAACAGGATCAAACCAACCAACAAAAAGGCCAAACCCAAGATTCCTAAGGTAAAGGACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 72 bp TGCCCTGCCAGGAGACTCACTGTGGCAGCAGGCCTCTaGAAGCGACCGTTGCCCATCGCTTGCATCATGATG +
Preference number: 6 (lower is better)
Translates to: CPARRLTVAAGL*KRPLPIACIMM
Trigger: CATCATGATGCAAGCGATGGGCAACGGTCGCTTCCAGAGGCCTGCTGCCACAGTGAGTCTCCTGGCAGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 72 bp GTAGCTCTAGAGTTTGCCCTGCCAGGAGACTCACTGTaGCAGCAGGCCTCTGGAAGCGACCGTTGCCCATCG +
Preference number: 6 (lower is better)
Translates to: VALEFALPGDSL*QQASGSDRCPS
Trigger: CGATGGGCAACGGTCGCTTCCAGAGGCCTGCTGCCACAGTGAGTCTCCTGGCAGGGCAAACTCTAGAGCTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CAA 90 bp CCTGCCAGGAGACTCACTGTGGCAGCAGGCCTCTGGAAGCGACCGTaGCCCATCGCTTGCATCATGATGGACTGGCTCTTTGCGGTTGAG +
Preference number: 6 (lower is better)
Translates to: PARRLTVAAGLWKRP*PIACIMMDWLFAVE
Trigger: CTCAACCGCAAAGAGCCAGTCCATCATGATGCAAGCGATGGGCAACGGTCGCTTCCAGAGGCCTGCTGCCACAGTGAGTCTCCTGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 72 bp TTTGGCGGGAAACTCCCTGTGGAGCGTGACTTTGGCTaGCGGGGCTGTCACTCGACAAGGAACCACAGCTTG +
Preference number: 6 (lower is better)
Translates to: FGGKLPVERDFG*RGCHSTRNHSL
Trigger: CAAGCTGTGGTTCCTTGTCGAGTGACAGCCCCGTCAGCCAAAGTCACGCTCCACAGGGAGTTTCCCGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 72 bp CCATTGGCAGGGATTTCTTTGGCGGGAAACTCCCTGTaGAGCGTGACTTTGGCTGACGGGGCTGTCACTCGA +
Preference number: 6 (lower is better)
Translates to: PLAGISLAGNSL*SVTLADGAVTR
Trigger: TCGAGTGACAGCCCCGTCAGCCAAAGTCACGCTCCACAGGGAGTTTCCCGCCAAAGAAATCCCTGCCAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 72 bp GCCTCTGGAAGCGACCGTTGCCCATCGCTTGCATCATaGTGGACTGGCTCTTTGCGGTTGAGTCAGTGGAGT +
Preference number: 6 (lower is better)
Translates to: ASGSDRCPSLAS*WTGSLRLSQWS
Trigger: ACTCCACTGACTCAACCGCAAAGAGCCAGTCCATCATGATGCAAGCGATGGGCAACGGTCGCTTCCAGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS GCA 72 bp TCCACTTTGCTCCCCTTACATCGTAGCTCTAGAGTTTaGCCTGCCAGGAGACTCACTGTGGCAGCAGGCCTC +
Preference number: 6 (lower is better)
Translates to: STLLPLHRSSRV*PARRLTVAAGL
Trigger: GAGGCCTGCTGCCACAGTGAGTCTCCTGGCAGGGCAAACTCTAGAGCTACGATGTAAGGGGAGCAAAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 72 bp AAGCGACCGTTGCCCATCGCTTGCATCATGATGGACTaGCTCTTTGCGGTTGAGTCAGTGGAGTCCCTGTCC +
Preference number: 6 (lower is better)
Translates to: KRPLPIACIMMD*LFAVESVESLS
Trigger: GGACAGGGACTCCACTGACTCAACCGCAAAGAGCCAGTCCATCATGATGCAAGCGATGGGCAACGGTCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CAA 72 bp AGACTCACTGTGGCAGCAGGCCTCTGGAAGCGACCGTaGCCCATCGCTTGCATCATGATGGACTGGCTCTTT +
Preference number: 6 (lower is better)
Translates to: RLTVAAGLWKRP*PIACIMMDWLF
Trigger: AAAGAGCCAGTCCATCATGATGCAAGCGATGGGCAACGGTCGCTTCCAGAGGCCTGCTGCCACAGTGAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CAA 90 bp CTCTTCATGTCGTACACAATGTCCGTGCCATTGGCAGGGATTTCTTaGGCGGGAAACTCCCTGTGGAGCGTGACTTTGGCTGACGGGGCT +
Preference number: 6 (lower is better)
Translates to: LFMSYTMSVPLAGIS*AGNSLWSVTLADGA
Trigger: AGCCCCGTCAGCCAAAGTCACGCTCCACAGGGAGTTTCCCGCCAAAGAAATCCCTGCCAATGGCACGGACATTGTGTACGACATGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 72 bp CTCTGGGAGATTCTTGTGGTGTGTCCCAGTCCTCTGTaGATCAGTCTCCAGGTGTCCTGGATGGTCACAGGC +
Preference number: 6 (lower is better)
Translates to: LWEILVVCPSPL*ISLQVSWMVTG
Trigger: GCCTGTGACCATCCAGGACACCTGGAGACTGATTCACAGAGGACTGGGACACACCACAAGAATCTCCCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS GCA 72 bp CAGGTGTCCTGGATGGTCACAGGCCTTTCGTCCTTCTaGCCAGGAAAGAGCCACCTGAATTCAACCTCCACA +
Preference number: 6 (lower is better)
Translates to: QVSWMVTGLSSF*PGKSHLNSTST
Trigger: TGTGGAGGTTGAATTCAGGTGGCTCTTTCCTGGGCAGAAGGACGAAAGGCCTGTGACCATCCAGGACACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 72 bp CCAGTCCTCTGTGAATCAGTCTCCAGGTGTCCTGGATaGTCACAGGCCTTTCGTCCTTCTGCCCAGGAAAGA +
Preference number: 6 (lower is better)
Translates to: PVLCESVSRCPG*SQAFRPSAQER
Trigger: TCTTTCCTGGGCAGAAGGACGAAAGGCCTGTGACCATCCAGGACACCTGGAGACTGATTCACAGAGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CAA 72 bp ATTTCTTTGGCGGGAAACTCCCTGTGGAGCGTGACTTaGGCTGACGGGGCTGTCACTCGACAAGGAACCACA +
Preference number: 6 (lower is better)
Translates to: ISLAGNSLWSVT*ADGAVTRQGTT
Trigger: TGTGGTTCCTTGTCGAGTGACAGCCCCGTCAGCCAAAGTCACGCTCCACAGGGAGTTTCCCGCCAAAGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CAA 72 bp GTGCAGAGCACGCTGATGTCATCACCGCCCCTCACTTaGTTAGAGGAGGCCAAGATGGTTGTTGATGGAGGG +
Preference number: 6 (lower is better)
Translates to: VQSTLMSSPPLT*LEEAKMVVDGG
Trigger: CCCTCCATCAACAACCATCTTGGCCTCCTCTAACAAAGTGAGGGGCGGTGATGACATCAGCGTGCTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 72 bp GCCCCTCACTTTGTTAGAGGAGGCCAAGATGGTTGTTaGTGGAGGGCCACTAGGAACCTCTACATAGAGCAG +
Preference number: 6 (lower is better)
Translates to: APHFVRGGQDGC*WRATRNLYIEQ
Trigger: CTGCTCTATGTAGAGGTTCCTAGTGGCCCTCCATCAACAACCATCTTGGCCTCCTCTAACAAAGTGAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 72 bp ACTAGGAACCTCTACATAGAGCAGCTGATACTTGACTaGGATCTGAGACTTGCCCCCGGCTTCCGCTTTGCA +
Preference number: 6 (lower is better)
Translates to: TRNLYIEQLILD*DLRLAPGFRFA
Trigger: TGCAAAGCGGAAGCCGGGGGCAAGTCTCAGATCTCAGTCAAGTATCAGCTGCTCTATGTAGAGGTTCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS GCA 72 bp ACACGAAACCTCTCTTCATGTCGTACACAATGTCCGTaGCATTGGCAGGGATTTCTTTGGCGGGAAACTCCC +
Preference number: 6 (lower is better)
Translates to: TRNLSSCRTQCP*HWQGFLWRETP
Trigger: GGGAGTTTCCCGCCAAAGAAATCCCTGCCAATGGCACGGACATTGTGTACGACATGAAGAGAGGTTTCGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS TCA 72 bp CATCGCTTGCATCATGATGGACTGGCTCTTTGCGGTTaGGTCAGTGGAGTCCCTGTCCTTTACCTTAGGAAT +
Preference number: 6 (lower is better)
Translates to: HRLHHDGLALCG*VSGVPVLYLRN
Trigger: ATTCCTAAGGTAAAGGACAGGGACTCCACTGACTCAACCGCAAAGAGCCAGTCCATCATGATGCAAGCGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS GCA 72 bp TCGCTACTGTGGTCTGTCCTCGGAGATTCTGAGCTGTaGATATGTAGTAGCCCGCATCAATGGTCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: SLLWSVLGDSEL*ICSSPHQWSQS
Trigger: ACTTTGAGACCATTGATGCGGGCTACTACATATGCACAGCTCAGAATCTCCGAGGACAGACCACAGTAGCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CCA 72 bp GTTGGTTGGTTTGATCCTGTTTTCTCCCTGCTCCTTTaGACGCTTGTTCTTAGGAGAATGCTGACCACCAAC +
Preference number: 6 (lower is better)
Translates to: VGWFDPVFSLLL*TLVLRRMLTTN
Trigger: GTTGGTGGTCAGCATTCTCCTAAGAACAAGCGTCCAAAGGAGCAGGGAGAAAACAGGATCAAACCAACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CAA 90 bp GAGTCCCTGTCCTTTACCTTAGGAATCTTGGGTTTGGCCTTTTTGTaGGTTGGTTTGATCCTGTTTTCTCCCTGCTCCTTTGGACGCTTG +
Preference number: 6 (lower is better)
Translates to: ESLSFTLGILGLAFL*VGLILFSPCSFGRL
Trigger: CAAGCGTCCAAAGGAGCAGGGAGAAAACAGGATCAAACCAACCAACAAAAAGGCCAAACCCAAGATTCCTAAGGTAAAGGACAGGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CAA 90 bp GTTGAGTCAGTGGAGTCCCTGTCCTTTACCTTAGGAATCTTGGGTTaGGCCTTTTTGTTGGTTGGTTTGATCCTGTTTTCTCCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: VESVESLSFTLGILG*AFLLVGLILFSPCS
Trigger: GGAGCAGGGAGAAAACAGGATCAAACCAACCAACAAAAAGGCCAAACCCAAGATTCCTAAGGTAAAGGACAGGGACTCCACTGACTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CAA 72 bp GTGGAGTCCCTGTCCTTTACCTTAGGAATCTTGGGTTaGGCCTTTTTGTTGGTTGGTTTGATCCTGTTTTCT +
Preference number: 6 (lower is better)
Translates to: VESLSFTLGILG*AFLLVGLILFS
Trigger: AGAAAACAGGATCAAACCAACCAACAAAAAGGCCAAACCCAAGATTCCTAAGGTAAAGGACAGGGACTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10
CDS CAA 72 bp TCCTTTACCTTAGGAATCTTGGGTTTGGCCTTTTTGTaGGTTGGTTTGATCCTGTTTTCTCCCTGCTCCTTT +
Preference number: 6 (lower is better)
Translates to: SFTLGILGLAFL*VGLILFSPCSF
Trigger: AAAGGAGCAGGGAGAAAACAGGATCAAACCAACCAACAAAAAGGCCAAACCCAAGATTCCTAAGGTAAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034004.10