Pregenerated sensors for PDGFRA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029231Ensembl transcript IDs: ENSMUST00000000476.15, ENSMUST00000168162.5, ENSMUST00000200822.2, ENSMUST00000201711.4, ENSMUST00000202161.4, ENSMUST00000202186.4, ENSMUST00000202681.4, ENSMUST00000202992.4
Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GGAGTTGTCTGCAGTACAAGTTGGCGCGTGTGGGACTCTCACCCATaGCCTGGAAACACAAAGCCCGTCTTCTGTGGCCAGTCACTCTCT | + |
Preference number: 1 (lower is better) Translates to: GVVCSTSWRVWDSHP*PGNTKPVFCGQSLS Trigger: AGAGAGTGACTGGCCACAGAAGACGGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCACACGCGCCAACTTGTACTGCAGACAACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CCA 90 bp | GTGGGACTCTCACCCATGCCCTGGAAACACAAAGCCCGTCTTCTGTaGCCAGTCACTCTCTTGTCCATCCATTTCCAAACCGCACACGCC | + |
Preference number: 1 (lower is better) Translates to: VGLSPMPWKHKARLL*PVTLLSIHFQTAHA Trigger: GGCGTGTGCGGTTTGGAAATGGATGGACAAGAGAGTGACTGGCCACAGAAGACGGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CCA 90 bp | TGTCTGCAGTACAAGTTGGCGCGTGTGGGACTCTCACCCATGCCCTaGAAACACAAAGCCCGTCTTCTGTGGCCAGTCACTCTCTTGTCC | + |
Preference number: 1 (lower is better) Translates to: CLQYKLARVGLSPMP*KHKARLLWPVTLLS Trigger: GGACAAGAGAGTGACTGGCCACAGAAGACGGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCACACGCGCCAACTTGTACTGCAGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 90 bp | CAGCTGGTACCGGATTCCAAGAAGGAAGGAAGCACACGGGTGGACTaGGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATC | + |
Preference number: 1 (lower is better) Translates to: QLVPDSKKEGSTRVD*VVSSEVRRGELTQI Trigger: GATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACCCGTGTGCTTCCTTCCTTCTTGGAATCCGGTACCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CCA 90 bp | AATGAGTCTCTTCCAGAAGGTCGCACACAGCGTGAGGAGTCACACTaGGCTCAGGCGTACGCCTTTCTACTGAGAACACTTAGGACACCC | + |
Preference number: 1 (lower is better) Translates to: NESLPEGRTQREESH*AQAYAFLLRTLRTP Trigger: GGGTGTCCTAAGTGTTCTCAGTAGAAAGGCGTACGCCTGAGCCCAGTGTGACTCCTCACGCTGTGTGCGACCTTCTGGAAGAGACTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 90 bp | GCCAGTCACTCTCTTGTCCATCCATTTCCAAACCGCACACGCCGCTaGGATGCTACTGACGCGTTGCAAGAGGCAACACGGATAAAGTTC | + |
Preference number: 1 (lower is better) Translates to: ASHSLVHPFPNRTRR*DATDALQEATRIKF Trigger: GAACTTTATCCGTGTTGCCTCTTGCAACGCGTCAGTAGCATCTCAGCGGCGTGTGCGGTTTGGAAATGGATGGACAAGAGAGTGACTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 90 bp | CTCACACATAGAGCACAAATCTACAAAAAGCTATCTTGGCCCAGCTaGGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACC | + |
Preference number: 1 (lower is better) Translates to: LTHRAQIYKKLSWPS*AAVHLGSTLLGRAT Trigger: GGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCAAGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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3UTR TCA 90 bp | TATGGGCGGGATCCATCCAAGCCATCACTGGTCAGGAGAGACATCTaGGTCCCATCTGATGGACATTCTGCCCATCTGAGTCCTTTTTGT | + |
Preference number: 1 (lower is better) Translates to: YGRDPSKPSLVRRDI*VPSDGHSAHLSPFC Trigger: ACAAAAAGGACTCAGATGGGCAGAATGTCCATCAGATGGGACTCAGATGTCTCTCCTGACCAGTGATGGCTTGGATGGATCCCGCCCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CCA 90 bp | CATAATTACAATGCTGGAGTTGTCTGCAGTACAAGTTGGCGCGTGTaGGACTCTCACCCATGCCCTGGAAACACAAAGCCCGTCTTCTGT | + |
Preference number: 1 (lower is better) Translates to: HNYNAGVVCSTSWRV*DSHPCPGNTKPVFC Trigger: ACAGAAGACGGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCACACGCGCCAACTTGTACTGCAGACAACTCCAGCATTGTAATTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 90 bp | GAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGGTACCCACGTTaGCTAGAATGGGAAGATGTTCCCAAGTCAAGATGTTTGCTTTCT | + |
Preference number: 1 (lower is better) Translates to: EQAQVLPSRGKWYPR*LEWEDVPKSRCLLS Trigger: AGAAAGCAAACATCTTGACTTGGGAACATCTTCCCATTCTAGTCAACGTGGGTACCACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 90 bp | TCTTGTCCATCCATTTCCAAACCGCACACGCCGCTGAGATGCTACTaGCGCGTTGCAAGAGGCAACACGGATAAAGTTCAATCCAAGTAT | + |
Preference number: 1 (lower is better) Translates to: SCPSISKPHTPLRCY*RVARGNTDKVQSKY Trigger: ATACTTGGATTGAACTTTATCCGTGTTGCCTCTTGCAACGCGTCAGTAGCATCTCAGCGGCGTGTGCGGTTTGGAAATGGATGGACAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 90 bp | TCTCTCCACATCACCCAAGTCCTCTTCTCAACTTTTGCATTGCAATaGAGTGGTTTTCTTAAGGTTATCCCGAGGAGGCTCCCGGAGAAG | + |
Preference number: 1 (lower is better) Translates to: SLHITQVLFSTFALQ*SGFLKVIPRRLPEK Trigger: CTTCTCCGGGAGCCTCCTCGGGATAACCTTAAGAAAACCACTTCATTGCAATGCAAAAGTTGAGAAGAGGACTTGGGTGATGTGGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 90 bp | CTTTCTCTCTCCACATCACCCAAGTCCTCTTCTCAACTTTTGCATTaGAATGAAGTGGTTTTCTTAAGGTTATCCCGAGGAGGCTCCCGG | + |
Preference number: 1 (lower is better) Translates to: LSLSTSPKSSSQLLH*NEVVFLRLSRGGSR Trigger: CCGGGAGCCTCCTCGGGATAACCTTAAGAAAACCACTTCATTGCAATGCAAAAGTTGAGAAGAGGACTTGGGTGATGTGGAGAGAGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 90 bp | TCCTCGGTTAAGAGTTATTTACATAATTACAATGCTGGAGTTGTCTaGAGTACAAGTTGGCGCGTGTGGGACTCTCACCCATGCCCTGGA | + |
Preference number: 1 (lower is better) Translates to: SSVKSYLHNYNAGVV*STSWRVWDSHPCPG Trigger: TCCAGGGCATGGGTGAGAGTCCCACACGCGCCAACTTGTACTGCAGACAACTCCAGCATTGTAATTATGTAAATAACTCTTAACCGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CCA 90 bp | AGTTATTTACATAATTACAATGCTGGAGTTGTCTGCAGTACAAGTTaGCGCGTGTGGGACTCTCACCCATGCCCTGGAAACACAAAGCCC | + |
Preference number: 1 (lower is better) Translates to: SYLHNYNAGVVCSTS*RVWDSHPCPGNTKP Trigger: GGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCACACGCGCCAACTTGTACTGCAGACAACTCCAGCATTGTAATTATGTAAATAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 90 bp | ATTCCCATTGAATCTCAGAGGTGGGTACAGCTAAAGATGGGAAACTaGTGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGG | + |
Preference number: 1 (lower is better) Translates to: IPIESQRWVQLKMGN*WSEKYHPTSWCHAR Trigger: CCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCAGCAGTTTCCCATCTTTAGCTGTACCCACCTCTGAGATTCAATGGGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CCA 90 bp | ATATATAGCTTCCTGCTCCCGTCAGACCTTGTAATTCCAAATCTCTaGGGCAAAGGTCTGACACCATTGAGGCTAGTAACTGTAGCTGTA | + |
Preference number: 1 (lower is better) Translates to: IYSFLLPSDLVIPNL*GKGLTPLRLVTVAV Trigger: TACAGCTACAGTTACTAGCCTCAATGGTGTCAGACCTTTGCCCCAGAGATTTGGAATTACAAGGTCTGACGGGAGCAGGAAGCTATATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 90 bp | GTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATaGGAAAATTCAACAGCAGCTGGTACCGGATTCCAAGAAGGAAGG | + |
Preference number: 1 (lower is better) Translates to: VPVPSKVQSGFACTS*ENSTAAGTGFQEGR Trigger: CCTTCCTTCTTGGAATCCGGTACCAGCTGCTGTTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 90 bp | AAATCAAGGGTAGGAATAGCTGCATACGTGGCATTGACATGTTATTaGCATGAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTG | + |
Preference number: 1 (lower is better) Translates to: KSRVGIAAYVALTCY*HEAKNLNSSLPAWL Trigger: CAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTCATGTCAATAACATGTCAATGCCACGTATGCAGCTATTCCTACCCTTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 90 bp | TATACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTaGGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAG | + |
Preference number: 1 (lower is better) Translates to: YTPGKQYTIGLHQQP*VFILLTHRAQIYKK Trigger: CTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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3UTR GCA 90 bp | GGGTTTGCTTTCAAACAAAAGTCAACAGGAACACTTGTCAGATACTaGAACCTCAAACTGTCTGCTCTCCAGTTAGTGTCACAACATGTA | + |
Preference number: 1 (lower is better) Translates to: GFAFKQKSTGTLVRY*NLKLSALQLVSQHV Trigger: TACATGTTGTGACACTAACTGGAGAGCAGACAGTTTGAGGTTGCAGTATCTGACAAGTGTTCCTGTTGACTTTTGTTTGAAAGCAAACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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3UTR-3UTR CCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGAAGGAAGCACACGGGTaGACTGAGTGGTCTCTTCAG | + |
Preference number: 2 (lower is better) Translates to: PGHTLRRASSGSPIQGEVKEAHG*TEWSLQ Trigger: CTGAAGAGACCACTCAGTCCACCCGTGTGCTTCCTT...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 90 bp | ATGCCCTGGAAACACAAAGCCCGTCTTCTGTGGCCAGTCACTCTCTaGTCCATCCATTTCCAAACCGCACACGCCGCTGAGATGCTACTG | + |
Preference number: 2 (lower is better) Translates to: MPWKHKARLLWPVTL*SIHFQTAHAAEMLL Trigger: CAGTAGCATCTCAGCGGCGTGTGCGGTTTGGAAATGGATGGACAAGAGAGTGACTGGCCACAGAAGACGGGCTTTGTGTTTCCAGGGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR TCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTACCGCTGAGATGCTACTaGCGCGTTGCAAGAGGCAAC | + |
Preference number: 2 (lower is better) Translates to: GGLSGLFRGPERRVNTDLPLRCY*RVARGN Trigger: GTTGCCTCTTGCAACGCGTCAGTAGCATCTCAGCGG...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR GCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGCCAAGTCAAGATGTTTaGTTTCTCAGCCTCAGCCAA | + |
Preference number: 2 (lower is better) Translates to: PGHTLRRASSGSPIQGEVPSQDV*FLSLSQ Trigger: TTGGCTGAGGCTGAGAAAGCAAACATCTTGACTTGG...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR CCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGGTAATTCCAAATCTCTaGGGCAAAGGTCTGACACCA | + |
Preference number: 2 (lower is better) Translates to: PGHTLRRASSGSPIQGEVVIPNL*GKGLTP Trigger: TGGTGTCAGACCTTTGCCCCAGAGATTTGGAATTAC...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR GCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTATGGGACTCTCACCCATaGCCTGGAAACACAAAGCCC | + |
Preference number: 2 (lower is better) Translates to: GGLSGLFRGPERRVNTDLWDSHP*PGNTKP Trigger: GGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCA...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 90 bp | CGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGGTACCCACGTaGACTAGAATGGGAAGATGTTCCCAAGTCAAGATGTTTGCTTTC | + |
Preference number: 2 (lower is better) Translates to: RASSGSPIQGEVVPT*TRMGRCSQVKMFAF Trigger: GAAAGCAAACATCTTGACTTGGGAACATCTTCCCATTCTAGTCAACGTGGGTACCACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR TCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGTTTGCATGTACTTCATaGGAAAATTCAACAGCAGCT | + |
Preference number: 2 (lower is better) Translates to: PGHTLRRASSGSPIQGEVFACTS*ENSTAA Trigger: AGCTGCTGTTGAATTTTCTCATGAAGTACATGCAAA...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR CCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAAAGGAAGCACACGGGTaGACTGAGTGGTCTCTTCAG | + |
Preference number: 2 (lower is better) Translates to: WSEKYHPTSWCHARPKATKEAHG*TEWSLQ Trigger: CTGAAGAGACCACTCAGTCCACCCGTGTGCTTCCTT...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR CCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGTTCCAAAGTTCAAAGTaGTTTTGCATGTACTTCATG | + |
Preference number: 2 (lower is better) Translates to: PGHTLRRASSGSPIQGEVFQSSK*FCMYFM Trigger: CATGAAGTACATGCAAAACCACTTTGAACTTTGGAA...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR GCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACACACCCACCGGGTTTCTaGTTTGCTTATCCCAGTACT | + |
Preference number: 2 (lower is better) Translates to: WSEKYHPTSWCHARPKATHPPGF*FAYPST Trigger: AGTACTGGGATAAGCAAAGCAGAAACCCGGTGGGTG...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 90 bp | ACCCATCCTCGGTTAAGAGTTATTTACATAATTACAATGCTGGAGTaGTCTGCAGTACAAGTTGGCGCGTGTGGGACTCTCACCCATGCC | + |
Preference number: 2 (lower is better) Translates to: THPRLRVIYIITMLE*SAVQVGACGTLTHA Trigger: GGCATGGGTGAGAGTCCCACACGCGCCAACTTGTACTGCAGACAACTCCAGCATTGTAATTATGTAAATAACTCTTAACCGAGGATGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 90 bp | ATTAGACACATGGCAGAGAATGCCAATGAACTCACACTAACCACTTaGACAGTTCGGATGCTCCTGATAGCCTACCACCTAAAGGCCCCA | + |
Preference number: 2 (lower is better) Translates to: IRHMAENANELTLTT*TVRMLLIAYHLKAP Trigger: TGGGGCCTTTAGGTGGTAGGCTATCAGGAGCATCCGAACTGTCAAAGTGGTTAGTGTGAGTTCATTGGCATTCTCTGCCATGTGTCTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR TCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTAAGCACACGGGTGGACTaGGTGGTCTCTTCAGAGGTC | + |
Preference number: 2 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVSTRVD*VVSSEV Trigger: GACCTCTGAAGAGACCACTCAGTCCACCCGTGTGCT...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR GCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACATGTGGTCTCAGGGTTTaGAGTTCTTTCTCGTCTGAG | + |
Preference number: 2 (lower is better) Translates to: WSEKYHPTSWCHARPKATCGLRV*SSFSSE Trigger: CTCAGACGAGAAAGAACTGCAAACCCTGAGACCACA...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR CCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACACGGGTGGACTGAGTaGTCTCTTCAGAGGTCCGGA | + |
Preference number: 2 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVHGWTE*SLQRSG Trigger: TCCGGACCTCTGAAGAGACCACTCAGTCCACCCGTG...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR CCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTCAACAGCACCATTGTaGTCTCAGGGTTTGCAGTTC | + |
Preference number: 2 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVSTAPL*SQGLQF Trigger: GAACTGCAAACCCTGAGACCACAATGGTGCTGTTGA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 90 bp | CGGGAACTTTCTCTCTCCACATCACCCAAGTCCTCTTCTCAACTTTaGCATTGCAATGAAGTGGTTTTCTTAAGGTTATCCCGAGGAGGC | + |
Preference number: 2 (lower is better) Translates to: RELSLSTSPKSSSQL*HCNEVVFLRLSRGG Trigger: GCCTCCTCGGGATAACCTTAAGAAAACCACTTCATTGCAATGCAAAAGTTGAGAAGAGGACTTGGGTGATGTGGAGAGAGAAAGTTCCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR TCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAAGTGTTTCTGAACACTaGCTATTCAAGAGCACCAGG | + |
Preference number: 2 (lower is better) Translates to: WSEKYHPTSWCHARPKATSVSEH*LFKSTR Trigger: CCTGGTGCTCTTGAATAGTCAGTGTTCAGAAACACT...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR GCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTATGGGACTCTCACCCATaGCCTGGAAACACAAAGCCC | + |
Preference number: 2 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVWDSHP*PGNTKP Trigger: GGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCA...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR TCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAAGACATTCTGCCCATCTaGGTCCTTTTTGTGAATGAG | + |
Preference number: 2 (lower is better) Translates to: HHCGLRVCSSFSSETREKDILPI*VLFVNE Trigger: CTCATTCACAAAAAGGACTCAGATGGGCAGAATGTC...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR TCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACATCTTCACACTTACTGTaGAAAGGGAAAGTTGGGGTT | + |
Preference number: 2 (lower is better) Translates to: WSEKYHPTSWCHARPKATSSHLL*KGKVGV Trigger: AACCCCAACTTTCCCTTTTCACAGTAAGTGTGAAGA...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR GCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTACCTCTTCTCAACTTTTaGATTGCAATGAAGTGGTTT | + |
Preference number: 2 (lower is better) Translates to: GGLSGLFRGPERRVNTDLPLLNF*IAMKWF Trigger: AAACCACTTCATTGCAATGCAAAAGTTGAGAAGAGG...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR TCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAAAGCACACGGGTGGACTaGGTGGTCTCTTCAGAGGTC | + |
Preference number: 2 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQSTRVD*VVSSEV Trigger: GACCTCTGAAGAGACCACTCAGTCCACCCGTGTGCT...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR-3UTR TCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTTTGCATGTACTTCATaGGAAAATTCAACAGCAGCT | + |
Preference number: 2 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVFACTS*ENSTAA Trigger: AGCTGCTGTTGAATTTTCTCATGAAGTACATGCAAA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR-3UTR GCA 90 bp | AATGGCTTGTACCTTTCACTTAAGAACCCTGAAAGCATTCAGAGCATGTTAGCGCTACATCAGCAACCCTaGGTCTTTATTCTTCTCACA | + |
Preference number: 2 (lower is better) Translates to: NGLYLSLKNPESIQSMLALHQQP*VFILLT Trigger: TGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAG...CGCTAACATGCTCTGAATGCTTTCAGGGTTCTTAAGTGAAAGGTACAAGCCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
||
3UTR CCA 72 bp | CAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTaGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTC | + |
Preference number: 3 (lower is better) Translates to: QLRSRALREHTA*QSYLSSRFPSL Trigger: GAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
||
3UTR-3UTR CAA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGGATGCTACTGACGCGTaGCAAGAGGCAACACGGATA | + |
Preference number: 3 (lower is better) Translates to: PGHTLRRASSGSPIQGEVDATDA*QEATRI Trigger: TATCCGTGTTGCCTCTTGCAACGCGTCAGTAGCATC...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 72 bp | TGCAGTACAAGTTGGCGCGTGTGGGACTCTCACCCATaGCCTGGAAACACAAAGCCCGTCTTCTGTGGCCAG | + |
Preference number: 3 (lower is better) Translates to: CSTSWRVWDSHP*PGNTKPVFCGQ Trigger: CTGGCCACAGAAGACGGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCACACGCGCCAACTTGTACTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR TCA 72 bp | CTGACACACAGACTTGCATCATTCCCGGACACACTTTaGGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGG | + |
Preference number: 3 (lower is better) Translates to: LTHRLASFPDTL*GEQAQVLPSRG Trigger: CCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGGAATGATGCAAGTCTGTGTGTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR CCA 72 bp | TACAAGTTGGCGCGTGTGGGACTCTCACCCATGCCCTaGAAACACAAAGCCCGTCTTCTGTGGCCAGTCACT | + |
Preference number: 3 (lower is better) Translates to: YKLARVGLSPMP*KHKARLLWPVT Trigger: AGTGACTGGCCACAGAAGACGGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCACACGCGCCAACTTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR TCA 72 bp | TCTCTTGTCCATCCATTTCCAAACCGCACACGCCGCTaGGATGCTACTGACGCGTTGCAAGAGGCAACACGG | + |
Preference number: 3 (lower is better) Translates to: SLVHPFPNRTRR*DATDALQEATR Trigger: CCGTGTTGCCTCTTGCAACGCGTCAGTAGCATCTCAGCGGCGTGTGCGGTTTGGAAATGGATGGACAAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR CCA 72 bp | AATGCTGGAGTTGTCTGCAGTACAAGTTGGCGCGTGTaGGACTCTCACCCATGCCCTGGAAACACAAAGCCC | + |
Preference number: 3 (lower is better) Translates to: NAGVVCSTSWRV*DSHPCPGNTKP Trigger: GGGCTTTGTGTTTCCAGGGCATGGGTGAGAGTCCCACACGCGCCAACTTGTACTGCAGACAACTCCAGCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR GCA 72 bp | ATGGAGCTGGTTGCACAAAGACCTGACACACAGACTTaGATCATTCCCGGACACACTTTGAGGCGAGCAAGC | + |
Preference number: 3 (lower is better) Translates to: MELVAQRPDTQT*IIPGHTLRRAS Trigger: GCTTGCTCGCCTCAAAGTGTGTCCGGGAATGATGCAAGTCTGTGTGTCAGGTCTTTGTGCAACCAGCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR CCA 72 bp | AAAGTAGGTATGGGCGGGATCCATCCAAGCCATCACTaGTCAGGAGAGACATCTGAGTCCCATCTGATGGAC | + |
Preference number: 3 (lower is better) Translates to: KVGMGGIHPSHH*SGETSESHLMD Trigger: GTCCATCAGATGGGACTCAGATGTCTCTCCTGACCAGTGATGGCTTGGATGGATCCCGCCCATACCTACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR CAA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGTCCTCTTCTCAACTTTaGCATTGCAATGAAGTGGTT | + |
Preference number: 3 (lower is better) Translates to: PGHTLRRASSGSPIQGEVSSSQL*HCNEVV Trigger: AACCACTTCATTGCAATGCAAAAGTTGAGAAGAGGA...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 72 bp | TCCATTTCCAAACCGCACACGCCGCTGAGATGCTACTaGCGCGTTGCAAGAGGCAACACGGATAAAGTTCAA | + |
Preference number: 3 (lower is better) Translates to: SISKPHTPLRCY*RVARGNTDKVQ Trigger: TTGAACTTTATCCGTGTTGCCTCTTGCAACGCGTCAGTAGCATCTCAGCGGCGTGTGCGGTTTGGAAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR TCA 72 bp | CAGGTTCTCCCATCCAGGGGGAAGTGGTACCCACGTTaGCTAGAATGGGAAGATGTTCCCAAGTCAAGATGT | + |
Preference number: 3 (lower is better) Translates to: QVLPSRGKWYPR*LEWEDVPKSRC Trigger: ACATCTTGACTTGGGAACATCTTCCCATTCTAGTCAACGTGGGTACCACTTCCCCCTGGATGGGAGAACCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 72 bp | AATCCCAGCACTGGGGGTACAGAGACAGTGGATCTCTaGGAGTTCAAGGCTAGCCTGGTTTACACAGTGAGT | + |
Preference number: 3 (lower is better) Translates to: NPSTGGTETVDL*EFKASLVYTVS Trigger: ACTCACTGTGTAAACCAGGCTAGCCTTGAACTCTCAGAGATCCACTGTCTCTGTACCCCCAGTGCTGGGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR CAA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAAGATGCTACTGACGCGTaGCAAGAGGCAACACGGATA | + |
Preference number: 3 (lower is better) Translates to: HHCGLRVCSSFSSETREKDATDA*QEATRI Trigger: TATCCGTGTTGCCTCTTGCAACGCGTCAGTAGCATC...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR-3UTR CAA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACACCCAAGTCAAGATGTTaGCTTTCTCAGCCTCAGCCA | + |
Preference number: 3 (lower is better) Translates to: WSEKYHPTSWCHARPKATPKSRC*LSQPQP Trigger: TGGCTGAGGCTGAGAAAGCAAACATCTTGACTTGGG...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR CCA 72 bp | TTCCTGCTCCCGTCAGACCTTGTAATTCCAAATCTCTaGGGCAAAGGTCTGACACCATTGAGGCTAGTAACT | + |
Preference number: 3 (lower is better) Translates to: FLLPSDLVIPNL*GKGLTPLRLVT Trigger: AGTTACTAGCCTCAATGGTGTCAGACCTTTGCCCCAGAGATTTGGAATTACAAGGTCTGACGGGAGCAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
3UTR TCA 72 bp | GAGGTGGGTACAGCTAAAGATGGGAAACTGCTGGTCTaGGAAGTATCATCCAACTTCATGGTGTCATGCAAG | + |
Preference number: 3 (lower is better) Translates to: EVGTAKDGKLLV*EVSSNFMVSCK Trigger: CTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCAGCAGTTTCCCATCTTTAGCTGTACCCACCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 72 bp | GCCTTCATTCAACAGCACCATTGTGGTCTCAGGGTTTaGAGTTCTTTCTCGTCTGAGACAAGAGAGAAAAAG | + |
Preference number: 3 (lower is better) Translates to: AFIQQHHCGLRV*SSFSSETREKK Trigger: CTTTTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTGCTGTTGAATGAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 72 bp | GAATCTCAGAGGTGGGTACAGCTAAAGATGGGAAACTaGTGGTCTGAGAAGTATCATCCAACTTCATGGTGT | + |
Preference number: 3 (lower is better) Translates to: ESQRWVQLKMGN*WSEKYHPTSWC Trigger: ACACCATGAAGTTGGATGATACTTCTCAGACCAGCAGTTTCCCATCTTTAGCTGTACCCACCTCTGAGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 72 bp | ATCACCCAAGTCCTCTTCTCAACTTTTGCATTGCAATaGAGTGGTTTTCTTAAGGTTATCCCGAGGAGGCTC | + |
Preference number: 3 (lower is better) Translates to: ITQVLFSTFALQ*SGFLKVIPRRL Trigger: GAGCCTCCTCGGGATAACCTTAAGAAAACCACTTCATTGCAATGCAAAAGTTGAGAAGAGGACTTGGGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 72 bp | CCCCCAACAGTAACCCAAGCCAGTGTTTCTGAACACTaGCTATTCAAGAGCACCAGGCAGTTCATATATATA | + |
Preference number: 3 (lower is better) Translates to: PPTVTQASVSEH*LFKSTRQFIYI Trigger: TATATATATGAACTGCCTGGTGCTCTTGAATAGTCAGTGTTCAGAAACACTGGCTTGGGTTACTGTTGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 72 bp | AAGAGTTATTTACATAATTACAATGCTGGAGTTGTCTaGAGTACAAGTTGGCGCGTGTGGGACTCTCACCCA | + |
Preference number: 3 (lower is better) Translates to: KSYLHNYNAGVV*STSWRVWDSHP Trigger: TGGGTGAGAGTCCCACACGCGCCAACTTGTACTGCAGACAACTCCAGCATTGTAATTATGTAAATAACTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 72 bp | GGCAAGCAATATACCATAGGGCTACATCAGCAACCCTaGGTCTTTATTCTTCTCACACATAGAGCACAAATC | + |
Preference number: 3 (lower is better) Translates to: GKQYTIGLHQQP*VFILLTHRAQI Trigger: GATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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3UTR CCA 72 bp | AACAAAAGTGAACGTATTCCCATTGAATCTCAGAGGTaGGTACAGCTAAAGATGGGAAACTGCTGGTCTGAG | + |
Preference number: 3 (lower is better) Translates to: NKSERIPIESQR*VQLKMGNCWSE Trigger: CTCAGACCAGCAGTTTCCCATCTTTAGCTGTACCCACCTCTGAGATTCAATGGGAATACGTTCACTTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CCA 72 bp | CATGAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATaGTTGACTTCTAGCCCCGTTCCAAATTTCAAAGTT | + |
Preference number: 3 (lower is better) Translates to: HEAKNLNSSLPA*LTSSPVPNFKV Trigger: AACTTTGAAATTTGGAACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR TCA 72 bp | CCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATaGGAAAATTCAACAGCAGCTGGTACCGGATTCCAA | + |
Preference number: 3 (lower is better) Translates to: PSKVQSGFACTS*ENSTAAGTGFQ Trigger: TTGGAATCCGGTACCAGCTGCTGTTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR GCA 72 bp | TTCAAACAAAAGTCAACAGGAACACTTGTCAGATACTaGAACCTCAAACTGTCTGCTCTCCAGTTAGTGTCA | + |
Preference number: 3 (lower is better) Translates to: FKQKSTGTLVRY*NLKLSALQLVS Trigger: TGACACTAACTGGAGAGCAGACAGTTTGAGGTTGCAGTATCTGACAAGTGTTCCTGTTGACTTTTGTTTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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3UTR-3UTR CAA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTATCCTCTTCTCAACTTTaGCATTGCAATGAAGTGGTT | + |
Preference number: 3 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVSSSQL*HCNEVV Trigger: AACCACTTCATTGCAATGCAAAAGTTGAGAAGAGGA...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | TGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCGATGTAAATGGGACCTaGCTTGGTGCAGGCTCCCAG | + |
Preference number: 4 (lower is better) Translates to: WPSCAAVHLGSTLLGRATDVNGT*LGAGSQ Trigger: CTGGGAGCCTGCACCAAGTCAGGTCCCATTTACATC...GGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGTGTCTGGCAGGGGGATaGTGTAGCCACTGTCAGCGC | + |
Preference number: 4 (lower is better) Translates to: PGHTLRRASSGSPIQGEVCLAGG*CSHCQR Trigger: GCGCTGACAGTGGCTACATCATCCCCCTGCCAGACA...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | CTATCTTGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGATGGGACCTGACTTGGTaGAGGCTCCCAGCAAGTTCA | + |
Preference number: 4 (lower is better) Translates to: LSWPSCAAVHLGSTLLGRWDLTW*RLPASS Trigger: TGAACTTGCTGGGAGCCTGCACCAAGTCAGGTCCCA...TCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCAAGATAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGACTTCACTGGTGGCATaGTCAGGTTTGGCCATCCGG | + |
Preference number: 4 (lower is better) Translates to: PGHTLRRASSGSPIQGEVTSLVA*SGLAIR Trigger: CCGGATGGCCAAACCTGACCATGCCACCAGTGAAGT...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGCGTCTTCTTCAGACATaGGGTGCTGCCAGCTCACTT | + |
Preference number: 4 (lower is better) Translates to: PGHTLRRASSGSPIQGEVRLLQT*GAASSL Trigger: AAGTGAGCTGGCAGCACCCCATGTCTGAAGAAGACG...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGACGAAGCCTTTCTCGTaGACAGAAATGGTGACTCTC | + |
Preference number: 4 (lower is better) Translates to: AQLRSRALREHTAWQSYLTKPFS*TEMVTL Trigger: GAGAGTCACCATTTCTGTCCACGAGAAAGGCTTCGT...CAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CTATCTTGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAAAATGGGACCTGACTTaGTGCAGGCTCCCAGCAAGT | + |
Preference number: 4 (lower is better) Translates to: LSWPSCAAVHLGSTLLGRKWDLT*CRLPAS Trigger: ACTTGCTGGGAGCCTGCACCAAGTCAGGTCCCATTT...TCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCAAGATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGTCCAGCACTGCACCATaGTCTCATAGACTTCACTGG | + |
Preference number: 4 (lower is better) Translates to: PGHTLRRASSGSPIQGEVSSTAP*SHRLHW Trigger: CCAGTGAAGTCTATGAGATCATGGTGCAGTGCTGGA...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAATCAGACATGGGGTGCTaGCAGCTCACTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: TLLGRATCHPGFPPSEQQSDMGC*QLTSLS Trigger: GGAGAGTGAAGTGAGCTGGCAGCACCCCATGTCTGA...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCCGTCTTCTTCAGACATaGGGTGCTGCCAGCTCACTT | + |
Preference number: 4 (lower is better) Translates to: HLGSTLLGRATCHPGFPPRLLQT*GAASSL Trigger: AAGTGAGCTGGCAGCACCCCATGTCTGAAGAAGACG...GGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGGGCTTCTCTGGGTGTTaGCTCATGAAGCTATCTCTG | + |
Preference number: 4 (lower is better) Translates to: PGHTLRRASSGSPIQGEVGFSGC*LMKLSL Trigger: CAGAGATAGCTTCATGAGCCAACACCCAGAGAAGCC...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGAGACGTCACTCAGCGTaGTGTAGAGGTTGTCGAAGA | + |
Preference number: 4 (lower is better) Translates to: PGHTLRRASSGSPIQGEVRRHSA*CRGCRR Trigger: TCTTCGACAACCTCTACACCACGCTGAGTGACGTCT...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 72 bp | CCTGACACACAGACTTGCATCATTCCCGGACACACTTaGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGG | + |
Preference number: 4 (lower is better) Translates to: PDTQTCIIPGHT*RRASSGSPIQG Trigger: CCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGGAATGATGCAAGTCTGTGTGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | TGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTCTTATGCAAGTAGTTaGCCAAATCCCCATAGAAGC | + |
Preference number: 4 (lower is better) Translates to: WPSCAAVHLGSTLLGRATSYASS*PNPHRS Trigger: GCTTCTATGGGGATTTGGTCAACTACTTGCATAAGA...GGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGCCGAAAGGAGGTTTTTaGCTTCTGAGTCTAGCATGG | + |
Preference number: 4 (lower is better) Translates to: PGHTLRRASSGSPIQGEVPKGGF*LLSLAW Trigger: CCATGCTAGACTCAGAAGTCAAAAACCTCCTTTCGG...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | CTATCTTGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGATCAGACATGAGAGCCTaGTTTTCACTAGACCTGGCT | + |
Preference number: 4 (lower is better) Translates to: LSWPSCAAVHLGSTLLGRSDMRA*FSLDLA Trigger: AGCCAGGTCTAGTGAAAAGCAGGCTCTCATGTCTGA...TCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCAAGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAGTCCACCCGCATGCGTaGCACGGCCGGATGGTCACT | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATVHPHA*HGRMVT Trigger: AGTGACCATCCGGCCGTGGCACGCATGCGGGTGGAC...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
CDS-3UTR GCA 90 bp | GCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGCAGAAAGATCATATTTaGCAGAATGAGCATGGGCAC | + |
Preference number: 4 (lower is better) Translates to: AQLRSRALREHTAWQSYLQKDHI*QNEHGH Trigger: GTGCCCATGCTCATTCTGGCAAATATGATCTTTCTG...CAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAATTGACAGCTTCCAGCTaGCCAAAGGTGGGCTCAATC | + |
Preference number: 4 (lower is better) Translates to: TLLGRATCHPGFPPSEQQLTASS*PKVGSI Trigger: GATTGAGCCCACCTTTGGCCAGCTGGAAGCTGTCAA...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAAGGCATCGAACTGCGATaGTCTCTTCCACTTTGGCGA | + |
Preference number: 4 (lower is better) Translates to: TLLGRATCHPGFPPSEQQGIELR*SLPLWR Trigger: TCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCC...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CTATCTTGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGATTTCTTCGGCTTCTCTaGGTGTTGGCTCATGAAGCT | + |
Preference number: 4 (lower is better) Translates to: LSWPSCAAVHLGSTLLGRFLRLL*VLAHEA Trigger: AGCTTCATGAGCCAACACCCAGAGAAGCCGAAGAAA...TCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCAAGATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | GCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGCTCTGTGATAATATTTaGGACATTGCTGGCCAAAAC | + |
Preference number: 4 (lower is better) Translates to: AQLRSRALREHTAWQSYLLCDNI*DIAGQN Trigger: GTTTTGGCCAGCAATGTCTCAAATATTATCACAGAG...CAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGGAGCAACTTGATAGGTaGAGCTCAATAGATCCAGCA | + |
Preference number: 4 (lower is better) Translates to: PGHTLRRASSGSPIQGEVEQLDR*SSIDPA Trigger: TGCTGGATCTATTGAGCTTCACCTATCAAGTTGCTC...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | AGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTTGCCAGGCATCGAACTaGGATGGTCTCTTCCACTTT | + |
Preference number: 4 (lower is better) Translates to: SRALREHTAWQSYLSSRFCQASN*DGLFHF Trigger: AAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCA...AAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | AGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTGCTGAGGTTGTTCTTTaGCAGGCATCGAACTGCGAT | + |
Preference number: 4 (lower is better) Translates to: SRALREHTAWQSYLSSRFAEVVL*QASNCD Trigger: ATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGC...AAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | TGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTCGTACAGCGATCTCTaGATGTCAGAGTATTTAGAA | + |
Preference number: 4 (lower is better) Translates to: WPSCAAVHLGSTLLGRATSYSDL*MSEYLE Trigger: TTCTAAATACTCTGACATCCAGAGATCGCTGTACGA...GGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | TGTGTATACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTTCCATCGGGGCTGATTaGCTCGATAACCCTCCAGCG | + |
Preference number: 4 (lower is better) Translates to: CVYTGQAIYHRATSATLRSIGAD*LDNPPA Trigger: CGCTGGAGGGTTATCGAGTCAATCAGCCCCGATGGA...ACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTATACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAAAAATGTGGCCCCAGGTaGGTCATTATCTTCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: TLLGRATCHPGFPPSEQQKCGPR*VIIFSS Trigger: TGAGCTGAAGATAATGACTCACCTGGGGCCACATTT...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACATGTCTGGCAGGGGGATaGTGTAGCCACTGTCAGCGC | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATCLAGG*CSHCQR Trigger: GCGCTGACAGTGGCTACATCATCCCCCTGCCAGACA...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | CTATCTTGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAAGATGTAAATGTGCCTaGCTTCGATCTCACTCTCAT | + |
Preference number: 4 (lower is better) Translates to: LSWPSCAAVHLGSTLLGRRCKCA*LRSHSH Trigger: ATGAGAGTGAGATCGAAGGCAGGCACATTTACATCT...TCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCAAGATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAATCATACCGTGGTTTCTaGTTCCAAATGACCACCAGG | + |
Preference number: 4 (lower is better) Translates to: TLLGRATCHPGFPPSEQQSYRGF*FQMTTR Trigger: CCTGGTGGTCATTTGGAAGCAGAAACCACGGTATGA...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | GGCATCACCGGTGGCACCCCGGAGTTTACAAATGAACTCATCCCAGCACAGTTTCGTCTTCTTCAGACATaGGGTGCTGCCAGCTCACTT | + |
Preference number: 4 (lower is better) Translates to: GITGGTPEFTNELIPAQFRLLQT*GAASSL Trigger: AAGTGAGCTGGCAGCACCCCATGTCTGAAGAAGACG...AAACTGTGCTGGGATGAGTTCATTTGTAAACTCCGGGGTGCCACCGGTGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTACCTTCACCGTGGCCTTaGGGACGGTCAAAGTGTACA | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLPSPWP*GRSKCT Trigger: TGTACACTTTGACCGTCCCCAAGGCCACGGTGAAGG...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCCGTAAGGCAACTGCATaGGGTCCACATAGATATACT | + |
Preference number: 4 (lower is better) Translates to: HLGSTLLGRATCHPGFPPRKATA*GPHRYT Trigger: AGTATATCTATGTGGACCCCATGCAGTTGCCTTACG...GGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTACCACTTCCAGCACTGTaGCAAAGAGGCCACTGTTGT | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLPLPAL*QRGHCC Trigger: ACAACAGTGGCCTCTTTGTCACAGTGCTGGAAGTGG...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | GCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCAGATGTAAATGTGCCTaGCTTCGATCTCACTCTCAT | + |
Preference number: 4 (lower is better) Translates to: ALREHTAWQSYLSSRFPSRCKCA*LRSHSH Trigger: ATGAGAGTGAGATCGAAGGCAGGCACATTTACATCT...GGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | CACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCACATAACTTCTTGTaGTCTCGTCTGCAGGATTCA | + |
Preference number: 4 (lower is better) Translates to: HLGSTLLGRATCHPGFPPSHNFL*SRLQDS Trigger: TGAATCCTGCAGACGAGAGCACAAGAAGTTATGTGA...GGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAACTACGAGATCCAAAATaGATGCAGGAACTAGGGTTG | + |
Preference number: 4 (lower is better) Translates to: TLLGRATCHPGFPPSEQQLRDPK*MQELGL Trigger: CAACCCTAGTTCCTGCATCCATTTTGGATCTCGTAG...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTAGGCATCGAACTGCGATaGTCTCTTCCACTTTGGCGA | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLGIELR*SLPLWR Trigger: TCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCC...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | TGTGTATACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCCACTTCCAGCACTGTaGCAAAGAGGCCACTGTTGT | + |
Preference number: 4 (lower is better) Translates to: CVYTGQAIYHRATSATLRPLPAL*QRGHCC Trigger: ACAACAGTGGCCTCTTTGTCACAGTGCTGGAAGTGG...ACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTATACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTCAGACATGGGGTGCTaGCAGCTCACTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVSDMGC*QLTSLS Trigger: GGAGAGTGAAGTGAGCTGGCAGCACCCCATGTCTGA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTAGCTGAGGTTGTTCTTTaGCAGGCATCGAACTGCGAT | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLAEVVL*QASNCD Trigger: ATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGC...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACATGGGACCTGACTTGGTaGAGGCTCCCAGCAAGTTCA | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATWDLTW*RLPASS Trigger: TGAACTTGCTGGGAGCCTGCACCAAGTCAGGTCCCA...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCTGGGACCTGACTTGGTaGAGGCTCCCAGCAAGTTCA | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKAWDLTW*RLPASS Trigger: TGAACTTGCTGGGAGCCTGCACCAAGTCAGGTCCCA...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | TACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTATTGGGACCTGACTTGGTaGAGGCTCCCAGCAAGTTCA | + |
Preference number: 4 (lower is better) Translates to: YTGQAIYHRATSATLRLYWDLTW*RLPASS Trigger: TGAACTTGCTGGGAGCCTGCACCAAGTCAGGTCCCA...ATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAATCACATAACTTCTTGTaGTCTCGTCTGCAGGATTCA | + |
Preference number: 4 (lower is better) Translates to: TLLGRATCHPGFPPSEQQSHNFL*SRLQDS Trigger: TGAATCCTGCAGACGAGAGCACAAGAAGTTATGTGA...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAACACTGTCCTTCACCGTaGCCTTGGGGACGGTCAAAG | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKHCPSP*PWGRSK Trigger: CTTTGACCGTCCCCAAGGCCACGGTGAAGGACAGTG...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | AGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTGCGAATTTCATACCGTaGTTTCTGCTTCCAAATGAC | + |
Preference number: 4 (lower is better) Translates to: SRALREHTAWQSYLSSRFANFIP*FLLPND Trigger: GTCATTTGGAAGCAGAAACCACGGTATGAAATTCGC...AAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAACACAATGTTCAAATGTaGCCCCAGGTGAGTCATTAT | + |
Preference number: 4 (lower is better) Translates to: TLLGRATCHPGFPPSEQQHNVQM*PQVSHY Trigger: ATAATGACTCACCTGGGGCCACATTTGAACATTGTG...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | GCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCTCGTACAGCGATCTCTaGATGTCAGAGTATTTAGAA | + |
Preference number: 4 (lower is better) Translates to: ALREHTAWQSYLSSRFPSSYSDL*MSEYLE Trigger: TTCTAAATACTCTGACATCCAGAGATCGCTGTACGA...GGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAGCAGCCAGGTCCCGGTaGACACAATTTTTCGAAGCC | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATAARSR*TQFFEA Trigger: GGCTTCGAAAAATTGTGTCCACCGGGACCTGGCTGC...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCACTTCACTGGTGGCATaGTCAGGTTTGGCCATCCGG | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKATSLVA*SGLAIR Trigger: CCGGATGGCCAAACCTGACCATGCCACCAGTGAAGT...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTACATAGACTTCACTGGTaGCATGGTCAGGTTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLHRLHW*HGQVWP Trigger: TGGCCAAACCTGACCATGCCACCAGTGAAGTCTATG...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 72 bp | TCAGGTTCTCCCATCCAGGGGGAAGTGGTACCCACGTaGACTAGAATGGGAAGATGTTCCCAAGTCAAGATG | + |
Preference number: 4 (lower is better) Translates to: SGSPIQGEVVPT*TRMGRCSQVKM Trigger: CATCTTGACTTGGGAACATCTTCCCATTCTAGTCAACGTGGGTACCACTTCCCCCTGGATGGGAGAACCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTCCACTTCCAGCACTGTaGCAAAGAGGCCACTGTTGT | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVPLPAL*QRGHCC Trigger: ACAACAGTGGCCTCTTTGTCACAGTGCTGGAAGTGG...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAAGTTGGAATCGTGCATaGTGTCTCTGGCCAGGCCAA | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATSWNRA*CLWPGQ Trigger: TTGGCCTGGCCAGAGACATCATGCACGATTCCAACT...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACATCTTCAGACATGGGGTaGTGCCAGCTCACTTCACTC | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATSSDMG*CQLTSL Trigger: GAGTGAAGTGAGCTGGCAGCACCCCATGTCTGAAGA...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTATCATACCGTGGTTTCTaGTTCCAAATGACCACCAGG | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLSYRGF*FQMTTR Trigger: CCTGGTGGTCATTTGGAAGCAGAAACCACGGTATGA...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTATCAGACATGAGAGCCTaGTTTTCACTAGACCTGGCT | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLSDMRA*FSLDLA Trigger: AGCCAGGTCTAGTGAAAAGCAGGCTCTCATGTCTGA...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACATGTGTCTGTTCCTCTTaGCCAGGTCTTCCTCCTCTG | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATCVCSS*PGLPPL Trigger: CAGAGGAGGAAGACCTGGGCAAGAGGAACAGACACA...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCTGTGTCTGTTCCTCTTaGCCAGGTCTTCCTCCTCTG | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKACVCSS*PGLPPL Trigger: CAGAGGAGGAAGACCTGGGCAAGAGGAACAGACACA...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCTTGACAGCTTCCAGCTaGCCAAAGGTGGGCTCAATC | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKALTASS*PKVGSI Trigger: GATTGAGCCCACCTTTGGCCAGCTGGAAGCTGTCAA...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAGGCATCGAACTGCGATaGTCTCTTCCACTTTGGCGA | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATGIELR*SLPLWR Trigger: TCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCC...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCAACAGGGTCAATGTCTaGCAGGGGGATGATGTAGCC | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKANRVNV*QGDDVA Trigger: GGCTACATCATCCCCCTGCCAGACATTGACCCTGTT...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTCAGGTCTTCCTCCTCTaGAACAGGGTCAATGTCTGG | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVQVFLL*NRVNVW Trigger: CCAGACATTGACCCTGTTCCAGAGGAGGAAGACCTG...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | GGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTGATGTAAATGGGACCTaGCTTGGTGCAGGCTCCCAG | + |
Preference number: 4 (lower is better) Translates to: GYISNPASLFFSHIEHKSDVNGT*LGAGSQ Trigger: CTGGGAGCCTGCACCAAGTCAGGTCCCATTTACATC...AGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACACTCTTCCGAAGTCTGTaGGCTGTGTCTGTTCCTCTT | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATLFRSL*AVSVPL Trigger: AAGAGGAACAGACACAGCTCACAGACTTCGGAAGAG...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | ATAGGGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAATCAGACATGGGGTGCTaGCAGCTCACTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: IGLHQQPCVFILLTHRAQSDMGC*QLTSLS Trigger: GGAGAGTGAAGTGAGCTGGCAGCACCCCATGTCTGA...TTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | CACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTTACATTTCTTAATATaGTTGCAGATCATCCAGTCG | + |
Preference number: 4 (lower is better) Translates to: HLGSTLLGRATCHPGFPPLHFLI*LQIIQS Trigger: CGACTGGATGATCTGCAAGCATATTAAGAAATGTAA...GGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTGCCAGGCATCGAACTaGGATGGTCTCTTCCACTTT | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVCQASN*DGLFHF Trigger: AAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | TACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTATTGCCAGGCATCGAACTaGGATGGTCTCTTCCACTTT | + |
Preference number: 4 (lower is better) Translates to: YTGQAIYHRATSATLRLYCQASN*DGLFHF Trigger: AAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCA...ATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAACGTCTTCTTCAGACATaGGGTGCTGCCAGCTCACTT | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKRLLQT*GAASSL Trigger: AAGTGAGCTGGCAGCACCCCATGTCTGAAGAAGACG...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTACACAAAGGCCATGTCTaGGTCTGGTACATAGATGTA | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLHKGHV*VWYIDV Trigger: TACATCTATGTACCAGACCCAGACATGGCCTTTGTG...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTACTACGAGATCCAAAATaGATGCAGGAACTAGGGTTG | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLLRDPK*MQELGL Trigger: CAACCCTAGTTCCTGCATCCATTTTGGATCTCGTAG...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GGCATCACCGGTGGCACCCCGGAGTTTACAAATGAACTCATCCCAGCACAGTTTTATTTGAGACATTGCTaGCCAAAACTGTCCACGAAG | + |
Preference number: 4 (lower is better) Translates to: GITGGTPEFTNELIPAQFYLRHC*PKLSTK Trigger: CTTCGTGGACAGTTTTGGCCAGCAATGTCTCAAATA...AAACTGTGCTGGGATGAGTTCATTTGTAAACTCCGGGGTGCCACCGGTGATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAAGACGTCACTCAGCGTaGTGTAGAGGTTGTCGAAGA | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATRRHSA*CRGCRR Trigger: TCTTCGACAACCTCTACACCACGCTGAGTGACGTCT...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCCATAGACTTCACTGGTaGCATGGTCAGGTTTGGCCA | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKAHRLHW*HGQVWP Trigger: TGGCCAAACCTGACCATGCCACCAGTGAAGTCTATG...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTGGAACCTGTCTCGATaGCACTCTCTTCCGAAGTCT | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVWNLSR*HSLPKS Trigger: AGACTTCGGAAGAGAGTGCCATCGAGACAGGTTCCA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTATCCATCGGGGCTGATTaGCTCGATAACCCTCCAGCG | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVSIGAD*LDNPPA Trigger: CGCTGGAGGGTTATCGAGTCAATCAGCCCCGATGGA...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | TACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACATCCATCGGGGCTGATTaGCTCGATAACCCTCCAGCG | + |
Preference number: 4 (lower is better) Translates to: YISNPASLFFSHIEHKSTSIGAD*LDNPPA Trigger: CGCTGGAGGGTTATCGAGTCAATCAGCCCCGATGGA...TGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAATCCAGCACTGCACCATaGTCTCATAGACTTCACTGG | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKSSTAP*SHRLHW Trigger: CCAGTGAAGTCTATGAGATCATGGTGCAGTGCTGGA...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAATGCCAGGCATCGAACTaGGATGGTCTCTTCCACTTT | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKCQASN*DGLFHF Trigger: AAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCA...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | GGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCGCTGAGGTTGTTCTTTaGCAGGCATCGAACTGCGAT | + |
Preference number: 4 (lower is better) Translates to: GKQYTIGLHQQPCVFILLAEVVL*QASNCD Trigger: ATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGC...GAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTCAGACATGAGAGCCTaGTTTTCACTAGACCTGGCT | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVSDMRA*FSLDLA Trigger: AGCCAGGTCTAGTGAAAAGCAGGCTCTCATGTCTGA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTATCACATAACTTCTTGTaGTCTCGTCTGCAGGATTCA | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLSHNFL*SRLQDS Trigger: TGAATCCTGCAGACGAGAGCACAAGAAGTTATGTGA...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | TACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACACACTGTCCTTCACCGTaGCCTTGGGGACGGTCAAAG | + |
Preference number: 4 (lower is better) Translates to: YISNPASLFFSHIEHKSTHCPSP*PWGRSK Trigger: CTTTGACCGTCCCCAAGGCCACGGTGAAGGACAGTG...TGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTACGAAGCCTTTCTCGTaGACAGAAATGGTGACTCTC | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVTKPFS*TEMVTL Trigger: GAGAGTCACCATTTCTGTCCACGAGAAAGGCTTCGT...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | ATAGGGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAATTGACAGCTTCCAGCTaGCCAAAGGTGGGCTCAATC | + |
Preference number: 4 (lower is better) Translates to: IGLHQQPCVFILLTHRAQLTASS*PKVGSI Trigger: GATTGAGCCCACCTTTGGCCAGCTGGAAGCTGTCAA...TTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTAGCGAATTTCATACCGTaGTTTCTGCTTCCAAATGAC | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLANFIP*FLLPND Trigger: GTCATTTGGAAGCAGAAACCACGGTATGAAATTCGC...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAAGGCTTCTCTGGGTGTTaGCTCATGAAGCTATCTCTG | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKGFSGC*LMKLSL Trigger: CAGAGATAGCTTCATGAGCCAACACCCAGAGAAGCC...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACATTTCTTCGGCTTCTCTaGGTGTTGGCTCATGAAGCT | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATFLRLL*VLAHEA Trigger: AGCTTCATGAGCCAACACCCAGAGAAGCCGAAGAAA...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTACTTCTGAGTCTAGCATaGATTTCTTCTTGTAGGAGG | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLLLSLA*ISSCRR Trigger: CCTCCTACAAGAAGAAATCCATGCTAGACTCAGAAG...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAAAAATGTGGCCCCAGGTaGGTCATTATCTTCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKKCGPR*VIIFSS Trigger: TGAGCTGAAGATAATGACTCACCTGGGGCCACATTT...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTAGATGTAAATGGGACCTaGCTTGGTGCAGGCTCCCAG | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVDVNGT*LGAGSQ Trigger: CTGGGAGCCTGCACCAAGTCAGGTCCCATTTACATC...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCGAGCAACTTGATAGGTaGAGCTCAATAGATCCAGCA | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKAEQLDR*SSIDPA Trigger: TGCTGGATCTATTGAGCTTCACCTATCAAGTTGCTC...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTATCAGACATGGGGTGCTaGCAGCTCACTTCACTCTCC | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVSDMGC*QLTSLS Trigger: GGAGAGTGAAGTGAGCTGGCAGCACCCCATGTCTGA...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAATCATACCGTGGTTTCTaGTTCCAAATGACCACCAGG | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKSYRGF*FQMTTR Trigger: CCTGGTGGTCATTTGGAAGCAGAAACCACGGTATGA...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTGGCCATGTCTGGGTCTaGTACATAGATGTAAATGTG | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVGHVWV*YIDVNV Trigger: CACATTTACATCTATGTACCAGACCCAGACATGGCC...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACCTTCACCGTGGCCTTaGGGACGGTCAAAGTGTACA | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVPSPWP*GRSKCT Trigger: TGTACACTTTGACCGTCCCCAAGGCCACGGTGAAGG...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTACACTGTCCTTCACCGTaGCCTTGGGGACGGTCAAAG | + |
Preference number: 4 (lower is better) Translates to: QPCVFILLTHRAQIYKKLHCPSP*PWGRSK Trigger: CTTTGACCGTCCCCAAGGCCACGGTGAAGGACAGTG...TAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAATTTCTTCGGCTTCTCTaGGTGTTGGCTCATGAAGCT | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKFLRLL*VLAHEA Trigger: AGCTTCATGAGCCAACACCCAGAGAAGCCGAAGAAA...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTATCGTACAGCGATCTCTaGATGTCAGAGTATTTAGAA | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLSYSDL*MSEYLE Trigger: TTCTAAATACTCTGACATCCAGAGATCGCTGTACGA...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTAACCTCTTTAGTGGCCTaGCGGGCAGCACATTCATAC | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVTSLVA*RAAHSY Trigger: GTATGAATGTGCTGCCCGTCAGGCCACTAAAGAGGT...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTCTTATGCAAGTAGTTaGCCAAATCCCCATAGAAGC | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVSYASS*PNPHRS Trigger: GCTTCTATGGGGATTTGGTCAACTACTTGCATAAGA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTAGGATCAGCTTTAATTTaGTCTGATACCTTGTTTCCT | + |
Preference number: 4 (lower is better) Translates to: GGLSGLFRGPERRVNTDLGSALI*SDTLFP Trigger: AGGAAACAAGGTATCAGAGCAAATTAAAGCTGATCC...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCTCACATAACTTCTTGTaGTCTCGTCTGCAGGATTCA | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKASHNFL*SRLQDS Trigger: TGAATCCTGCAGACGAGAGCACAAGAAGTTATGTGA...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | TATACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTCAGAAAGATCATATTTaGCAGAATGAGCATGGGCAC | + |
Preference number: 4 (lower is better) Translates to: YTPGKQYTIGLHQQPCVFQKDHI*QNEHGH Trigger: GTGCCCATGCTCATTCTGGCAAATATGATCTTTCTG...AAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | GTAAGATTGCCAACTTTCAGATTGGCCATTGAGAAAACACCAATTATCACCACTCCTTCACCGTGGCCTTaGGGACGGTCAAAGTGTACA | + |
Preference number: 4 (lower is better) Translates to: VRLPTFRLAIEKTPIITTPSPWP*GRSKCT Trigger: TGTACACTTTGACCGTCCCCAAGGCCACGGTGAAGG...AGTGGTGATAATTGGTGTTTTCTCAATGGCCAATCTGAAAGTTGGCAATCTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CCA 90 bp | CAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTACCTTCACCGTGGCCTTaGGGACGGTCAAAGTGTACA | + |
Preference number: 4 (lower is better) Translates to: QPCVFILLTHRAQIYKKLPSPWP*GRSKCT Trigger: TGTACACTTTGACCGTCCCCAAGGCCACGGTGAAGG...TAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTATTTGAGACATTGCTaGCCAAAACTGTCCACGAAG | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVYLRHC*PKLSTK Trigger: CTTCGTGGACAGTTTTGGCCAGCAATGTCTCAAATA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACATATTTGAGACATTGCTaGCCAAAACTGTCCACGAAG | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATYLRHC*PKLSTK Trigger: CTTCGTGGACAGTTTTGGCCAGCAATGTCTCAAATA...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
CDS-3UTR CCA 90 bp | TACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAGGCATCGAACTGCGATaGTCTCTTCCACTTTGGCGA | + |
Preference number: 4 (lower is better) Translates to: YISNPASLFFSHIEHKSTGIELR*SLPLWR Trigger: TCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCC...TGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCGCGAATTTCATACCGTaGTTTCTGCTTCCAAATGAC | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKAANFIP*FLLPND Trigger: GTCATTTGGAAGCAGAAACCACGGTATGAAATTCGC...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCCACAATGTTCAAATGTaGCCCCAGGTGAGTCATTAT | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKAHNVQM*PQVSHY Trigger: ATAATGACTCACCTGGGGCCACATTTGAACATTGTG...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACACTTTCCTTTCAAGCATaGGGACATACTGTGTGGTAT | + |
Preference number: 4 (lower is better) Translates to: WSEKYHPTSWCHARPKATLSFQA*GHTVWY Trigger: ATACCACACAGTATGTCCCCATGCTTGAAAGGAAAG...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACAGGTCTTCCTCCTCTaGAACAGGGTCAATGTCTGG | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVQVFLL*NRVNVW Trigger: CCAGACATTGACCCTGTTCCAGAGGAGGAAGACCTG...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 72 bp | GTAATTCCAAATCTCTGGGGCAAAGGTCTGACACCATaGAGGCTAGTAACTGTAGCTGTAGTTAATGGTGGG | + |
Preference number: 4 (lower is better) Translates to: VIPNLWGKGLTP*RLVTVAVVNGG Trigger: CCCACCATTAACTACAGCTACAGTTACTAGCCTCAATGGTGTCAGACCTTTGCCCCAGAGATTTGGAATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 72 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTaGACTTCTAGCCCCGTTCCAAATTTCAAAGTTGCC | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAW*TSSPVPNFKVA Trigger: GGCAACTTTGAAATTTGGAACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | CAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTACCACTTCCAGCACTGTaGCAAAGAGGCCACTGTTGT | + |
Preference number: 4 (lower is better) Translates to: QPCVFILLTHRAQIYKKLPLPAL*QRGHCC Trigger: ACAACAGTGGCCTCTTTGTCACAGTGCTGGAAGTGG...TAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCCTCTGTGATAATATTTaGGACATTGCTGGCCAAAAC | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKALCDNI*DIAGQN Trigger: GTTTTGGCCAGCAATGTCTCAAATATTATCACAGAG...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | TATACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTCTCTGTGATAATATTTaGGACATTGCTGGCCAAAAC | + |
Preference number: 4 (lower is better) Translates to: YTPGKQYTIGLHQQPCVFLCDNI*DIAGQN Trigger: GTTTTGGCCAGCAATGTCTCAAATATTATCACAGAG...AAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAATCCATCGGGGCTGATTaGCTCGATAACCCTCCAGCG | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQSIGAD*LDNPPA Trigger: CGCTGGAGGGTTATCGAGTCAATCAGCCCCGATGGA...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAAAGATGTAAATGTGCCTaGCTTCGATCTCACTCTCAT | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKRCKCA*LRSHSH Trigger: ATGAGAGTGAGATCGAAGGCAGGCACATTTACATCT...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTAGCTGAGGTTGTTCTTTaGCAGGCATCGAACTGCGAT | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVAEVVL*QASNCD Trigger: ATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGC...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | ATAGGGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAACACAAAGGCCATGTCTaGGTCTGGTACATAGATGTA | + |
Preference number: 4 (lower is better) Translates to: IGLHQQPCVFILLTHRAQHKGHV*VWYIDV Trigger: TACATCTATGTACCAGACCCAGACATGGCCTTTGTG...TTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAACACTGTCCTTCACCGTaGCCTTGGGGACGGTCAAAG | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQHCPSP*PWGRSK Trigger: CTTTGACCGTCCCCAAGGCCACGGTGAAGGACAGTG...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCCACAATGTTCAAATGTaGCCCCAGGTGAGTCATTAT | + |
Preference number: 4 (lower is better) Translates to: GKQYTIGLHQQPCVFILLHNVQM*PQVSHY Trigger: ATAATGACTCACCTGGGGCCACATTTGAACATTGTG...GAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | ATACTGCAACCTCAAACTGTCTGCTCTCCAGTTAGTGTCACAACATGTACATTAGGCTTCTCTGGGTGTTaGCTCATGAAGCTATCTCTG | + |
Preference number: 4 (lower is better) Translates to: ILQPQTVCSPVSVTTCTLGFSGC*LMKLSL Trigger: CAGAGATAGCTTCATGAGCCAACACCCAGAGAAGCC...TAATGTACATGTTGTGACACTAACTGGAGAGCAGACAGTTTGAGGTTGCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTCGTACAGCGATCTCTaGATGTCAGAGTATTTAGAA | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVSYSDL*MSEYLE Trigger: TTCTAAATACTCTGACATCCAGAGATCGCTGTACGA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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3UTR CAA 72 bp | CGGTTAAGAGTTATTTACATAATTACAATGCTGGAGTaGTCTGCAGTACAAGTTGGCGCGTGTGGGACTCTC | + |
Preference number: 4 (lower is better) Translates to: RLRVIYIITMLE*SAVQVGACGTL Trigger: GAGAGTCCCACACGCGCCAACTTGTACTGCAGACAACTCCAGCATTGTAATTATGTAAATAACTCTTAACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAACTCTGTGATAATATTTaGGACATTGCTGGCCAAAAC | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKLCDNI*DIAGQN Trigger: GTTTTGGCCAGCAATGTCTCAAATATTATCACAGAG...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACCGAAAGGAGGTTTTTaGCTTCTGAGTCTAGCATGG | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVPKGGF*LLSLAW Trigger: CCATGCTAGACTCAGAAGTCAAAAACCTCCTTTCGG...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCGGATCAGCTTTAATTTaGTCTGATACCTTGTTTCCT | + |
Preference number: 4 (lower is better) Translates to: TDKVQSKYPSHPHRLTKAGSALI*SDTLFP Trigger: AGGAAACAAGGTATCAGAGCAAATTAAAGCTGATCC...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | GGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTGCGAATTTCATACCGTaGTTTCTGCTTCCAAATGAC | + |
Preference number: 4 (lower is better) Translates to: GYISNPASLFFSHIEHKSANFIP*FLLPND Trigger: GTCATTTGGAAGCAGAAACCACGGTATGAAATTCGC...AGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | GTAAGATTGCCAACTTTCAGATTGGCCATTGAGAAAACACCAATTATCACCACTAAATGTGGCCCCAGGTaGGTCATTATCTTCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: VRLPTFRLAIEKTPIITTKCGPR*VIIFSS Trigger: TGAGCTGAAGATAATGACTCACCTGGGGCCACATTT...AGTGGTGATAATTGGTGTTTTCTCAATGGCCAATCTGAAAGTTGGCAATCTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR TCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAAAGTTGGAATCGTGCATaGTGTCTCTGGCCAGGCCAA | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQSWNRA*CLWPGQ Trigger: TTGGCCTGGCCAGAGACATCATGCACGATTCCAACT...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | GGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCGGATCAGCTTTAATTTaGTCTGATACCTTGTTTCCT | + |
Preference number: 4 (lower is better) Translates to: GKQYTIGLHQQPCVFILLGSALI*SDTLFP Trigger: AGGAAACAAGGTATCAGAGCAAATTAAAGCTGATCC...GAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTTTACATTTCTTAATATaGTTGCAGATCATCCAGTCG | + |
Preference number: 4 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVLHFLI*LQIIQS Trigger: CGACTGGATGATCTGCAAGCATATTAAGAAATGTAA...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | TATACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTTTACATTTCTTAATATaGTTGCAGATCATCCAGTCG | + |
Preference number: 4 (lower is better) Translates to: YTPGKQYTIGLHQQPCVFLHFLI*LQIIQS Trigger: CGACTGGATGATCTGCAAGCATATTAAGAAATGTAA...AAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACACAAAGGCCATGTCTaGGTCTGGTACATAGATGTA | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVHKGHV*VWYIDV Trigger: TACATCTATGTACCAGACCCAGACATGGCCTTTGTG...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAATTGACAGCTTCCAGCTaGCCAAAGGTGGGCTCAATC | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQLTASS*PKVGSI Trigger: GATTGAGCCCACCTTTGGCCAGCTGGAAGCTGTCAA...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTACGAGATCCAAAATaGATGCAGGAACTAGGGTTG | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVLRDPK*MQELGL Trigger: CAACCCTAGTTCCTGCATCCATTTTGGATCTCGTAG...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACGTAAGGCAACTGCATaGGGTCCACATAGATATACT | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVRKATA*GPHRYT Trigger: AGTATATCTATGTGGACCCCATGCAGTTGCCTTACG...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAAAAATGGGACCTGACTTaGTGCAGGCTCCCAGCAAGT | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQKWDLT*CRLPAS Trigger: ACTTGCTGGGAGCCTGCACCAAGTCAGGTCCCATTT...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | AACAATGTAAGATTGCCAACTTTCAGATTGGCCATTGAGAAAACACCAATTATCAAATGGGACCTGACTTaGTGCAGGCTCCCAGCAAGT | + |
Preference number: 4 (lower is better) Translates to: NNVRLPTFRLAIEKTPIIKWDLT*CRLPAS Trigger: ACTTGCTGGGAGCCTGCACCAAGTCAGGTCCCATTT...GATAATTGGTGTTTTCTCAATGGCCAATCTGAAAGTTGGCAATCTTACATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CCA 90 bp | CCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTTGGCTTCTCTGGGTGTTaGCTCATGAAGCTATCTCTG | + |
Preference number: 4 (lower is better) Translates to: PASLFFSHIEHKSTKSYLGFSGC*LMKLSL Trigger: CAGAGATAGCTTCATGAGCCAACACCCAGAGAAGCC...AAGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATTTCTTCGGCTTCTCTaGGTGTTGGCTCATGAAGCT | + |
Preference number: 4 (lower is better) Translates to: QPCVFILLTHRAQIYKKLFLRLL*VLAHEA Trigger: AGCTTCATGAGCCAACACCCAGAGAAGCCGAAGAAA...TAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAATGGCATGGTCAGGTTTaGCCATCCGGTATCCACTCT | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQWHGQV*PSGIHS Trigger: AGAGTGGATACCGGATGGCCAAACCTGACCATGCCA...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAAAACAGGGTCAATGTCTaGCAGGGGGATGATGTAGCC | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQNRVNV*QGDDVA Trigger: GGCTACATCATCCCCCTGCCAGACATTGACCCTGTT...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTAAGATGTAAATGTGCCTaGCTTCGATCTCACTCTCAT | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVRCKCA*LRSHSH Trigger: ATGAGAGTGAGATCGAAGGCAGGCACATTTACATCT...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
CDS-3UTR GCA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAATTACATTTCTTAATATaGTTGCAGATCATCCAGTCG | + |
Preference number: 4 (lower is better) Translates to: HHCGLRVCSSFSSETREKLHFLI*LQIIQS Trigger: CGACTGGATGATCTGCAAGCATATTAAGAAATGTAA...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | CCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTTTCATACCGTGGTTTCTaGTTCCAAATGACCACCAGG | + |
Preference number: 4 (lower is better) Translates to: PASLFFSHIEHKSTKSYLSYRGF*FQMTTR Trigger: CCTGGTGGTCATTTGGAAGCAGAAACCACGGTATGA...AAGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTCACAAAGGCCATGTCTaGGTCTGGTACATAGATGTA | + |
Preference number: 4 (lower is better) Translates to: PCVFILLTHRAQIYKKLSHKGHV*VWYIDV Trigger: TACATCTATGTACCAGACCCAGACATGGCCTTTGTG...AGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTTACGAAGCCTTTCTCGTaGACAGAAATGGTGACTCTC | + |
Preference number: 4 (lower is better) Translates to: PASLFFSHIEHKSTKSYLTKPFS*TEMVTL Trigger: GAGAGTCACCATTTCTGTCCACGAGAAAGGCTTCGT...AAGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTCTACGAGATCCAAAATaGATGCAGGAACTAGGGTTG | + |
Preference number: 4 (lower is better) Translates to: PCVFILLTHRAQIYKKLSLRDPK*MQELGL Trigger: CAACCCTAGTTCCTGCATCCATTTTGGATCTCGTAG...AGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | TACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACATATTTGAGACATTGCTaGCCAAAACTGTCCACGAAG | + |
Preference number: 4 (lower is better) Translates to: YISNPASLFFSHIEHKSTYLRHC*PKLSTK Trigger: CTTCGTGGACAGTTTTGGCCAGCAATGTCTCAAATA...TGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTACGTAAGGCAACTGCATaGGGTCCACATAGATATACT | + |
Preference number: 4 (lower is better) Translates to: QPCVFILLTHRAQIYKKLRKATA*GPHRYT Trigger: AGTATATCTATGTGGACCCCATGCAGTTGCCTTACG...TAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTTCCTTTCAAGCATaGGGACATACTGTGTGGTAT | + |
Preference number: 4 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVLSFQA*GHTVWY Trigger: ATACCACACAGTATGTCCCCATGCTTGAAAGGAAAG...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | TACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACACTTTCCTTTCAAGCATaGGGACATACTGTGTGGTAT | + |
Preference number: 4 (lower is better) Translates to: YISNPASLFFSHIEHKSTLSFQA*GHTVWY Trigger: ATACCACACAGTATGTCCCCATGCTTGAAAGGAAAG...TGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAATGGAACCTGTCTCGATaGCACTCTCTTCCGAAGTCT | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQWNLSR*HSLPKS Trigger: AGACTTCGGAAGAGAGTGCCATCGAGACAGGTTCCA...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAAAAATGTGGCCCCAGGTaGGTCATTATCTTCAGCTCA | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQKCGPR*VIIFSS Trigger: TGAGCTGAAGATAATGACTCACCTGGGGCCACATTT...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | CCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTTCATATTTGCCAGAATaGGCATGGGCACTTTTACCT | + |
Preference number: 4 (lower is better) Translates to: PCVFILLTHRAQIYKKLSSYLPE*AWALLP Trigger: AGGTAAAAGTGCCCATGCTCATTCTGGCAAATATGA...AGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR GCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAATGCCAGGATAGGGTGTaGCACCAAGGGAAAAGATTT | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQCQDRV*HQGKRF Trigger: AAATCTTTTCCCTTGGTGGCACACCCTATCCTGGCA...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAAACGAAGCCTTTCTCGTaGACAGAAATGGTGACTCTC | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQTKPFS*TEMVTL Trigger: GAGAGTCACCATTTCTGTCCACGAGAAAGGCTTCGT...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR TCA 90 bp | CCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTTTCTTATGCAAGTAGTTaGCCAAATCCCCATAGAAGC | + |
Preference number: 4 (lower is better) Translates to: PASLFFSHIEHKSTKSYLSYASS*PNPHRS Trigger: GCTTCTATGGGGATTTGGTCAACTACTTGCATAAGA...AAGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | CCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTTTCATATTTGCCAGAATaGGCATGGGCACTTTTACCT | + |
Preference number: 4 (lower is better) Translates to: PASLFFSHIEHKSTKSYLSYLPE*AWALLP Trigger: AGGTAAAAGTGCCCATGCTCATTCTGGCAAATATGA...AAGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAACGTAAGGCAACTGCATaGGGTCCACATAGATATACT | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQRKATA*GPHRYT Trigger: AGTATATCTATGTGGACCCCATGCAGTTGCCTTACG...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTTCTTTCCTTTCAAGCATaGGGACATACTGTGTGGTAT | + |
Preference number: 4 (lower is better) Translates to: PASLFFSHIEHKSTKSYLLSFQA*GHTVWY Trigger: ATACCACACAGTATGTCCCCATGCTTGAAAGGAAAG...AAGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR TCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAATCTTATGCAAGTAGTTaGCCAAATCCCCATAGAAGC | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQSYASS*PNPHRS Trigger: GCTTCTATGGGGATTTGGTCAACTACTTGCATAAGA...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAACACAATGTTCAAATGTaGCCCCAGGTGAGTCATTAT | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQHNVQM*PQVSHY Trigger: ATAATGACTCACCTGGGGCCACATTTGAACATTGTG...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CCA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAACTTCTGAGTCTAGCATaGATTTCTTCTTGTAGGAGG | + |
Preference number: 4 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQLLSLA*ISSCRR Trigger: CCTCCTACAAGAAGAAATCCATGCTAGACTCAGAAG...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR GCA 90 bp | CCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTTGGATCAGCTTTAATTTaGTCTGATACCTTGTTTCCT | + |
Preference number: 4 (lower is better) Translates to: PASLFFSHIEHKSTKSYLGSALI*SDTLFP Trigger: AGGAAACAAGGTATCAGAGCAAATTAAAGCTGATCC...AAGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | TGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCCGGCTTCTCTGGGTGTaGGCTCATGAAGCTATCTCT | + |
Preference number: 5 (lower is better) Translates to: WPSCAAVHLGSTLLGRATRLLWV*AHEAIS Trigger: AGAGATAGCTTCATGAGCCAACACCCAGAGAAGCCG...GGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CCA 90 bp | GGTTGTTCTTTGCCAGGCATCGAACTGCGATGGTCTCTTCCACTTTaGCGAAGGACACTCGTCCCTCCACGGTACTCCTGCCACGGCGAG | + |
Preference number: 5 (lower is better) Translates to: GCSLPGIELRWSLPL*RRTLVPPRYSCHGE Trigger: CTCGCCGTGGCAGGAGTACCGTGGAGGGACGAGTGTCCTTCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCAAAGAACAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | GCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGCTTCTGATTTCCACGTaGGGGTCGTCTTCTTCAGAC | + |
Preference number: 5 (lower is better) Translates to: AQLRSRALREHTAWQSYLLLIST*GSSSSD Trigger: GTCTGAAGAAGACGACCCCAACGTGGAAATCAGAAG...CAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS TCA 90 bp | ATCGCAGAGTGGGAGCCACCAGCTTCAGCTCACGGGCCACAACGCTaGGGTTGTTCTTTGCCAGGCATCGAACTGCGATGGTCTCTTCCA | + |
Preference number: 5 (lower is better) Translates to: IAEWEPPASAHGPQR*GCSLPGIELRWSLP Trigger: TGGAAGAGACCATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGCGTTGTGGCCCGTGAGCTGAAGCTGGTGGCTCCCACTCTGCGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS GCA 90 bp | CTCACGGGCCACAACGCTGAGGTTGTTCTTTGCCAGGCATCGAACTaGGATGGTCTCTTCCACTTTGGCGAAGGACACTCGTCCCTCCAC | + |
Preference number: 5 (lower is better) Translates to: LTGHNAEVVLCQASN*DGLFHFGEGHSSLH Trigger: GTGGAGGGACGAGTGTCCTTCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGCGTTGTGGCCCGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | TGGCCCAGCTGCGCAGCCGTGCACTTAGGGAGCACACTGCTTGGCAGAGCTACCCTGTGTGGTATCAGCTaGCTTCATGTCCATGTAGTC | + |
Preference number: 5 (lower is better) Translates to: WPSCAAVHLGSTLLGRATLCGIS*LHVHVV Trigger: GACTACATGGACATGAAGCAAGCTGATACCACACAG...GGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGCACGGCTGCGCAGCTGGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS GCA 90 bp | AGCCACCAGCTTCAGCTCACGGGCCACAACGCTGAGGTTGTTCTTTaGCAGGCATCGAACTGCGATGGTCTCTTCCACTTTGGCGAAGGA | + |
Preference number: 5 (lower is better) Translates to: SHQLQLTGHNAEVVL*QASNCDGLFHFGEG Trigger: TCCTTCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGCGTTGTGGCCCGTGAGCTGAAGCTGGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS GCA 90 bp | CAGGACGATGAGAGAGACAATGACAATCACCAACAGCACCAACACTaGGGCCGCCACTGTGAGTTCAGATCGCAGAGTGGGAGCCACCAG | + |
Preference number: 5 (lower is better) Translates to: QDDERDNDNHQQHQH*GRHCEFRSQSGSHQ Trigger: CTGGTGGCTCCCACTCTGCGATCTGAACTCACAGTGGCGGCCGCAGTGTTGGTGCTGTTGGTGATTGTCATTGTCTCTCTCATCGTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAATTGAACGTCCTCCCTTaGACGGTGGCCTCACAGATG | + |
Preference number: 5 (lower is better) Translates to: TLLGRATCHPGFPPSEQQLNVLP*TVASQM Trigger: CATCTGTGAGGCCACCGTCAAAGGGAGGACGTTCAA...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGTTGATGGATGGGAGTTaGATCTCCTCCAGCATGGTG | + |
Preference number: 5 (lower is better) Translates to: PGHTLRRASSGSPIQGEVLMDGS*ISSSMV Trigger: CACCATGCTGGAGGAGATCAAACTCCCATCCATCAA...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS GCA 90 bp | CGTCTGAGTGTGGTTGTAGTAGCAAGTGTACCATCCGGTGTGGGCTaGGGAGGCGTTAACCACTTCCAGCACTGTGACAAAGAGGCCACT | + |
Preference number: 5 (lower is better) Translates to: RLSVVVVASVPSGVG*GGVNHFQHCDKEAT Trigger: AGTGGCCTCTTTGTCACAGTGCTGGAAGTGGTTAACGCCTCCGCAGCCCACACCGGATGGTACACTTGCTACTACAACCACACTCAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS CCA 90 bp | CCTTCGGCTGTACACCTCACAGTCTGTCCCCCGCCAGAGCCATGGTaGTCATCTACGAGATCCAAAATGGATGCAGGAACTAGGGTTGAC | + |
Preference number: 5 (lower is better) Translates to: PSAVHLTVCPPPEPW*SSTRSKMDAGTRVD Trigger: GTCAACCCTAGTTCCTGCATCCATTTTGGATCTCGTAGATGACCACCATGGCTCTGGCGGGGGACAGACTGTGAGGTGTACAGCCGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CCA 90 bp | GTGCCTTCGGCTGTACACCTCACAGTCTGTCCCCCGCCAGAGCCATaGTGGTCATCTACGAGATCCAAAATGGATGCAGGAACTAGGGTT | + |
Preference number: 5 (lower is better) Translates to: VPSAVHLTVCPPPEP*WSSTRSKMDAGTRV Trigger: AACCCTAGTTCCTGCATCCATTTTGGATCTCGTAGATGACCACCATGGCTCTGGCGGGGGACAGACTGTGAGGTGTACAGCCGAAGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | GCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTTCTGATTTCCACGTaGGGGTCGTCTTCTTCAGAC | + |
Preference number: 5 (lower is better) Translates to: ALREHTAWQSYLSSRFPSLLIST*GSSSSD Trigger: GTCTGAAGAAGACGACCCCAACGTGGAAATCAGAAG...GGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CCA 90 bp | TCCACCACGAACTCTCTGACTTCGTGCAAGTTGACAGCTTCCAGCTaGCCAAAGGTGGGCTCAATCTCGACGAAGCCTTTCTCGTGGACA | + |
Preference number: 5 (lower is better) Translates to: STTNSLTSCKLTASS*PKVGSISTKPFSWT Trigger: TGTCCACGAGAAAGGCTTCGTCGAGATTGAGCCCACCTTTGGCCAGCTGGAAGCTGTCAACTTGCACGAAGTCAGAGAGTTCGTGGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTATCCTTCACCGTGGCCTaGGGGACGGTCAAAGTGTAC | + |
Preference number: 5 (lower is better) Translates to: GGLSGLFRGPERRVNTDLSFTVA*GTVKVY Trigger: GTACACTTTGACCGTCCCCAAGGCCACGGTGAAGGA...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | CCCGGACACACTTTGAGGCGAGCAAGCTCAGGTTCTCCCATCCAGGGGGAAGTGTCCGAAAGGAGGTTTTaGACTTCTGAGTCTAGCATG | + |
Preference number: 5 (lower is better) Translates to: PGHTLRRASSGSPIQGEVSERRF*TSESSM Trigger: CATGCTAGACTCAGAAGTCAAAAACCTCCTTTCGGA...CACTTCCCCCTGGATGGGAGAACCTGAGCTTGCTCGCCTCAAAGTGTGTCCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTATTGAACGTCCTCCCTTaGACGGTGGCCTCACAGATG | + |
Preference number: 5 (lower is better) Translates to: GGLSGLFRGPERRVNTDLLNVLP*TVASQM Trigger: CATCTGTGAGGCCACCGTCAAAGGGAGGACGTTCAA...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTACTTCACAATTTTTCCTaGCGCCAGGAGGACGTTGCG | + |
Preference number: 5 (lower is better) Translates to: GGLSGLFRGPERRVNTDLLHNFS*RQEDVA Trigger: CGCAACGTCCTCCTGGCGCAAGGAAAAATTGTGAAG...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCGTGGCATGGTCAGGTTaGGCCATCCGGTATCCACTC | + |
Preference number: 5 (lower is better) Translates to: TDKVQSKYPSHPHRLTKAVAWSG*AIRYPL Trigger: GAGTGGATACCGGATGGCCAAACCTGACCATGCCAC...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS CCA 90 bp | CACCGTGGCCTTGGGGACGGTCAAAGTGTACACCAGTTTGATGGATaGGAGTTTGATCTCCTCCAGCATGGTGATACCTTTGTTTCTCAC | + |
Preference number: 5 (lower is better) Translates to: HRGLGDGQSVHQFDG*EFDLLQHGDTFVSH Trigger: GTGAGAAACAAAGGTATCACCATGCTGGAGGAGATCAAACTCCCATCCATCAAACTGGTGTACACTTTGACCGTCCCCAAGGCCACGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CCA 90 bp | TCTGTCCCCCGCCAGAGCCATGGTGGTCATCTACGAGATCCAAAATaGATGCAGGAACTAGGGTTGACAGCTCAAACGTGTAACTCTTCA | + |
Preference number: 5 (lower is better) Translates to: SVPRQSHGGHLRDPK*MQELGLTAQTCNSS Trigger: TGAAGAGTTACACGTTTGAGCTGTCAACCCTAGTTCCTGCATCCATTTTGGATCTCGTAGATGACCACCATGGCTCTGGCGGGGGACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
||
CDS-3UTR CAA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCTTGAACGTCCTCCCTTaGACGGTGGCCTCACAGATG | + |
Preference number: 5 (lower is better) Translates to: TDKVQSKYPSHPHRLTKALNVLP*TVASQM Trigger: CATCTGTGAGGCCACCGTCAAAGGGAGGACGTTCAA...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTATTGATGGATGGGAGTTaGATCTCCTCCAGCATGGTG | + |
Preference number: 5 (lower is better) Translates to: GGLSGLFRGPERRVNTDLLMDGS*ISSSMV Trigger: CACCATGCTGGAGGAGATCAAACTCCCATCCATCAA...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | ACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCTCTGAGCAGCAAAAAGTGTACACCAGTTaGATGGATGGGAGTTTGATC | + |
Preference number: 5 (lower is better) Translates to: TLLGRATCHPGFPPSEQQKVYTS*MDGSLI Trigger: GATCAAACTCCCATCCATCAAACTGGTGTACACTTT...TTGCTGCTCAGAGGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | CACCATTGTGGTCTCAGGGTTTGCAGTTCTTTCTCGTCTGAGACAAGAGAGAAATCCTTCACCGTGGCCTaGGGGACGGTCAAAGTGTAC | + |
Preference number: 5 (lower is better) Translates to: HHCGLRVCSSFSSETREKSFTVA*GTVKVY Trigger: GTACACTTTGACCGTCCCCAAGGCCACGGTGAAGGA...TTTCTCTCTTGTCTCAGACGAGAAAGAACTGCAAACCCTGAGACCACAATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
||
CDS-3UTR CAA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCCTGACTTCGTGCAAGTaGACAGCTTCCAGCTGGCCA | + |
Preference number: 5 (lower is better) Translates to: TDKVQSKYPSHPHRLTKALTSCK*TASSWP Trigger: TGGCCAGCTGGAAGCTGTCAACTTGCACGAAGTCAG...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACACTGACTTCGTGCAAGTaGACAGCTTCCAGCTGGCCA | + |
Preference number: 5 (lower is better) Translates to: WSEKYHPTSWCHARPKATLTSCK*TASSWP Trigger: TGGCCAGCTGGAAGCTGTCAACTTGCACGAAGTCAG...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | GCACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCATTTGCTCTGATACCTaGTTTCCTGACTCTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: ALREHTAWQSYLSSRFPSICSDT*FPDSSV Trigger: TACAGAAGAGTCAGGAAACAAGGTATCAGAGCAAAT...GGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | CACTTAGGGAGCACACTGCTTGGCAGAGCTACCTGTCATCCCGGTTTCCCTCCCATAATATTTGAGACATaGCTGGCCAAAACTGTCCAC | + |
Preference number: 5 (lower is better) Translates to: HLGSTLLGRATCHPGFPPIIFET*LAKTVH Trigger: GTGGACAGTTTTGGCCAGCAATGTCTCAAATATTAT...GGGAGGGAAACCGGGATGACAGGTAGCTCTGCCAAGCAGTGTGCTCCCTAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS GCA 90 bp | GCACAAAGGCCATGTCTGGGTCTGGTACATAGATGTAAATGTGCCTaGCTTCGATCTCACTCTCATCCGTCTGAGTGTGGTTGTAGTAGC | + |
Preference number: 5 (lower is better) Translates to: AQRPCLGLVHRCKCA*LRSHSHPSECGCSS Trigger: GCTACTACAACCACACTCAGACGGATGAGAGTGAGATCGAAGGCAGGCACATTTACATCTATGTACCAGACCCAGACATGGCCTTTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS CCA 90 bp | TCCAGCTGGCCAAAGGTGGGCTCAATCTCGACGAAGCCTTTCTCGTaGACAGAAATGGTGACTCTCTTCATTTCCTTGACCTCTTTAGTG | + |
Preference number: 5 (lower is better) Translates to: SSWPKVGSISTKPFS*TEMVTLFISLTSLV Trigger: CACTAAAGAGGTCAAGGAAATGAAGAGAGTCACCATTTCTGTCCACGAGAAAGGCTTCGTCGAGATTGAGCCCACCTTTGGCCAGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CCA 90 bp | GTTTCCATACTTCTTAATATGCTTGCAGATCATCCAGTCGATTTCTaGAAGAGGGGTGCCTTCGGCTGTACACCTCACAGTCTGTCCCCC | + |
Preference number: 5 (lower is better) Translates to: VSILLNMLADHPVDF*KRGAFGCTPHSLSP Trigger: GGGGGACAGACTGTGAGGTGTACAGCCGAAGGCACCCCTCTTCCAGAAATCGACTGGATGATCTGCAAGCATATTAAGAAGTATGGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202186.4 |
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CDS-3UTR CAA 90 bp | ACAGGAACACTTGTCAGATACTGCAACCTCAAACTGTCTGCTCTCCAGTTAGTGTTGAACGTCCTCCCTTaGACGGTGGCCTCACAGATG | + |
Preference number: 5 (lower is better) Translates to: TGTLVRYCNLKLSALQLVLNVLP*TVASQM Trigger: CATCTGTGAGGCCACCGTCAAAGGGAGGACGTTCAA...CACTAACTGGAGAGCAGACAGTTTGAGGTTGCAGTATCTGACAAGTGTTCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CAA 90 bp | GGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTTCCTTCACCGTGGCCTaGGGGACGGTCAAAGTGTAC | + |
Preference number: 5 (lower is better) Translates to: GYISNPASLFFSHIEHKSSFTVA*GTVKVY Trigger: GTACACTTTGACCGTCCCCAAGGCCACGGTGAAGGA...AGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACACGGCTTCTCTGGGTGTaGGCTCATGAAGCTATCTCT | + |
Preference number: 5 (lower is better) Translates to: WSEKYHPTSWCHARPKATRLLWV*AHEAIS Trigger: AGAGATAGCTTCATGAGCCAACACCCAGAGAAGCCG...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCCGGCTTCTCTGGGTGTaGGCTCATGAAGCTATCTCT | + |
Preference number: 5 (lower is better) Translates to: TDKVQSKYPSHPHRLTKARLLWV*AHEAIS Trigger: AGAGATAGCTTCATGAGCCAACACCCAGAGAAGCCG...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | TACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTATCGGCTTCTCTGGGTGTaGGCTCATGAAGCTATCTCT | + |
Preference number: 5 (lower is better) Translates to: YTGQAIYHRATSATLRLYRLLWV*AHEAIS Trigger: AGAGATAGCTTCATGAGCCAACACCCAGAGAAGCCG...ATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCCTTCACAATTTTTCCTaGCGCCAGGAGGACGTTGCG | + |
Preference number: 5 (lower is better) Translates to: TDKVQSKYPSHPHRLTKALHNFS*RQEDVA Trigger: CGCAACGTCCTCCTGGCGCAAGGAAAAATTGTGAAG...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS TCA 90 bp | CTCCACGGTACTCCTGCCACGGCGAGGGAGCTCTGTGATAATATTTaGGACATTGCTGGCCAAAACTGTCCACGAAGTGTCATTATTACA | + |
Preference number: 5 (lower is better) Translates to: LHGTPATARELCDNI*DIAGQNCPRSVIIT Trigger: TGTAATAATGACACTTCGTGGACAGTTTTGGCCAGCAATGTCTCAAATATTATCACAGAGCTCCCTCGCCGTGGCAGGAGTACCGTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTCTTCTGATTTCCACGTaGGGGTCGTCTTCTTCAGAC | + |
Preference number: 5 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVLLIST*GSSSSD Trigger: GTCTGAAGAAGACGACCCCAACGTGGAAATCAGAAG...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCGTCTCGTCCTCTCTCTaGATGAAGGTGGAACTACTG | + |
Preference number: 5 (lower is better) Translates to: TDKVQSKYPSHPHRLTKAVSSSL*MKVELL Trigger: CAGTAGTTCCACCTTCATCAAGAGAGAGGACGAGAC...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAGTCTCGTCCTCTCTCTaGATGAAGGTGGAACTACTG | + |
Preference number: 5 (lower is better) Translates to: WSEKYHPTSWCHARPKATVSSSL*MKVELL Trigger: CAGTAGTTCCACCTTCATCAAGAGAGAGGACGAGAC...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCCTGTGTGGTATCAGCTaGCTTCATGTCCATGTAGTC | + |
Preference number: 5 (lower is better) Translates to: TDKVQSKYPSHPHRLTKALCGIS*LHVHVV Trigger: GACTACATGGACATGAAGCAAGCTGATACCACACAG...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | TACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTATCTGTGTGGTATCAGCTaGCTTCATGTCCATGTAGTC | + |
Preference number: 5 (lower is better) Translates to: YTGQAIYHRATSATLRLYLCGIS*LHVHVV Trigger: GACTACATGGACATGAAGCAAGCTGATACCACACAG...ATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTAGTGGCATGGTCAGGTTaGGCCATCCGGTATCCACTC | + |
Preference number: 5 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVVAWSG*AIRYPL Trigger: GAGTGGATACCGGATGGCCAAACCTGACCATGCCAC...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS GCA 90 bp | GACCACACAAGAACAGGGAACATCTGGTTTCCATACTTCTTAATATaGTTGCAGATCATCCAGTCGATTTCTGGAAGAGGGGTGCCTTCG | + |
Preference number: 5 (lower is better) Translates to: DHTRTGNIWFPYFLI*LQIIQSISGRGVPS Trigger: CGAAGGCACCCCTCTTCCAGAAATCGACTGGATGATCTGCAAGCATATTAAGAAGTATGGAAACCAGATGTTCCCTGTTCTTGTGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202186.4 |
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CDS CCA 90 bp | ATTATTACATTTCTTAATATGCTTGCAGATCATCCAGTCGATTTCTaGAAGAGGGGTGCCTTCGGCTGTACACCTCACAGTCTGTCCCCC | + |
Preference number: 5 (lower is better) Translates to: IITFLNMLADHPVDF*KRGAFGCTPHSLSP Trigger: GGGGGACAGACTGTGAGGTGTACAGCCGAAGGCACCCCTCTTCCAGAAATCGACTGGATGATCTGCAAGCATATTAAGAAATGTAATAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAACAAAGAGGCCACTGTaGTTCTCCTCACTTCTGATT | + |
Preference number: 5 (lower is better) Translates to: WSEKYHPTSWCHARPKATTKRPL*FSSLLI Trigger: AATCAGAAGTGAGGAGAACAACAGTGGCCTCTTTGT...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | GGTGGACTGAGTGGTCTCTTCAGAGGTCCGGAGAGGAGAGTTAACACAGATCTAGATTCAGTTCTGACGTaGCTTTCAAGGCATAAACAT | + |
Preference number: 5 (lower is better) Translates to: GGLSGLFRGPERRVNTDLDSVLT*LSRHKH Trigger: ATGTTTATGCCTTGAAAGCAACGTCAGAACTGAATC...TAGATCTGTGTTAACTCTCCTCTCCGGACCTCTGAAGAGACCACTCAGTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | ATAGGGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAATTGATGGATGGGAGTTaGATCTCCTCCAGCATGGTG | + |
Preference number: 5 (lower is better) Translates to: IGLHQQPCVFILLTHRAQLMDGS*ISSSMV Trigger: CACCATGCTGGAGGAGATCAAACTCCCATCCATCAA...TTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | TACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACACTGACTTCGTGCAAGTaGACAGCTTCCAGCTGGCCA | + |
Preference number: 5 (lower is better) Translates to: YISNPASLFFSHIEHKSTLTSCK*TASSWP Trigger: TGGCCAGCTGGAAGCTGTCAACTTGCACGAAGTCAG...TGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | GTAAGATTGCCAACTTTCAGATTGGCCATTGAGAAAACACCAATTATCACCACTGACCTGGCTGTGGGTTaGAGCATCTTCACAGCCACC | + |
Preference number: 5 (lower is better) Translates to: VRLPTFRLAIEKTPIITTDLAVG*SIFTAT Trigger: GGTGGCTGTGAAGATGCTCAAACCCACAGCCAGGTC...AGTGGTGATAATTGGTGTTTTCTCAATGGCCAATCTGAAAGTTGGCAATCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CAA 90 bp | CCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTGACCTGGCTGTGGGTTaGAGCATCTTCACAGCCACC | + |
Preference number: 5 (lower is better) Translates to: PCVFILLTHRAQIYKKLSDLAVG*SIFTAT Trigger: GGTGGCTGTGAAGATGCTCAAACCCACAGCCAGGTC...AGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACATCCGAAAGGAGGTTTTaGACTTCTGAGTCTAGCATG | + |
Preference number: 5 (lower is better) Translates to: WSEKYHPTSWCHARPKATSERRF*TSESSM Trigger: CATGCTAGACTCAGAAGTCAAAAACCTCCTTTCGGA...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAAAAGTGTACACCAGTTaGATGGATGGGAGTTTGATC | + |
Preference number: 5 (lower is better) Translates to: WSEKYHPTSWCHARPKATKVYTS*MDGSLI Trigger: GATCAAACTCCCATCCATCAAACTGGTGTACACTTT...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTAAAGTGTACACCAGTTaGATGGATGGGAGTTTGATC | + |
Preference number: 5 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVKVYTS*MDGSLI Trigger: GATCAAACTCCCATCCATCAAACTGGTGTACACTTT...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | CCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTCTGACTTCGTGCAAGTaGACAGCTTCCAGCTGGCCA | + |
Preference number: 5 (lower is better) Translates to: PCVFILLTHRAQIYKKLSLTSCK*TASSWP Trigger: TGGCCAGCTGGAAGCTGTCAACTTGCACGAAGTCAG...AGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CCA 90 bp | TGCAGGATTCAATCCAAAGATGTCCAGGTCTTTCTTCGGCTTCTCTaGGTGTTGGCTCATGAAGCTATCTCTGTTCTTATGCAAGTAGTT | + |
Preference number: 5 (lower is better) Translates to: CRIQSKDVQVFLRLL*VLAHEAISVLMQVV Trigger: AACTACTTGCATAAGAACAGAGATAGCTTCATGAGCCAACACCCAGAGAAGCCGAAGAAAGACCTGGACATCTTTGGATTGAATCCTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCTGATTTCCACGTaGGGGTCGTCTTCTTCAGAC | + |
Preference number: 5 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVLLIST*GSSSSD Trigger: GTCTGAAGAAGACGACCCCAACGTGGAAATCAGAAG...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | GAAGCCAAGAACTTAAACAGTAGCCTTCCTGCATGGTTGACTTCTAGCCCCGTTGATTCAGTTCTGACGTaGCTTTCAAGGCATAAACAT | + |
Preference number: 5 (lower is better) Translates to: EAKNLNSSLPAWLTSSPVDSVLT*LSRHKH Trigger: ATGTTTATGCCTTGAAAGCAACGTCAGAACTGAATC...AACGGGGCTAGAAGTCAACCATGCAGGAAGGCTACTGTTTAAGTTCTTGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | TACACCGGGCAAGCAATATACCATAGGGCTACATCAGCAACCCTGCGTCTTTATGATTCAGTTCTGACGTaGCTTTCAAGGCATAAACAT | + |
Preference number: 5 (lower is better) Translates to: YTGQAIYHRATSATLRLYDSVLT*LSRHKH Trigger: ATGTTTATGCCTTGAAAGCAACGTCAGAACTGAATC...ATAAAGACGCAGGGTTGCTGATGTAGCCCTATGGTATATTGCTTGCCCGGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | AACAATGTAAGATTGCCAACTTTCAGATTGGCCATTGAGAAAACACCAATTATCTCCTTCACCGTGGCCTaGGGGACGGTCAAAGTGTAC | + |
Preference number: 5 (lower is better) Translates to: NNVRLPTFRLAIEKTPIISFTVA*GTVKVY Trigger: GTACACTTTGACCGTCCCCAAGGCCACGGTGAAGGA...GATAATTGGTGTTTTCTCAATGGCCAATCTGAAAGTTGGCAATCTTACATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CAA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAATTTGCTCTGATACCTaGTTTCCTGACTCTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: WSEKYHPTSWCHARPKATICSDT*FPDSSV Trigger: TACAGAAGAGTCAGGAAACAAGGTATCAGAGCAAAT...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | ACGGATAAAGTTCAATCCAAGTATCCCAGTCATCCACACAGGCTTACCAAGGCCATAATATTTGAGACATaGCTGGCCAAAACTGTCCAC | + |
Preference number: 5 (lower is better) Translates to: TDKVQSKYPSHPHRLTKAIIFET*LAKTVH Trigger: GTGGACAGTTTTGGCCAGCAATGTCTCAAATATTAT...GGCCTTGGTAAGCCTGTGTGGATGACTGGGATACTTGGATTGAACTTTATCCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | TGGTCTGAGAAGTATCATCCAACTTCATGGTGTCATGCAAGGCCCAAAGCGACAATAATATTTGAGACATaGCTGGCCAAAACTGTCCAC | + |
Preference number: 5 (lower is better) Translates to: WSEKYHPTSWCHARPKATIIFET*LAKTVH Trigger: GTGGACAGTTTTGGCCAGCAATGTCTCAAATATTAT...TGTCGCTTTGGGCCTTGCATGACACCATGAAGTTGGATGATACTTCTCAGACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | CAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTACTTCATGAGAAAATTCAAGACCTGGCTGTGGGTTaGAGCATCTTCACAGCCACC | + |
Preference number: 5 (lower is better) Translates to: QYLPKFKVVLHVLHEKIQDLAVG*SIFTAT Trigger: GGTGGCTGTGAAGATGCTCAAACCCACAGCCAGGTC...TTGAATTTTCTCATGAAGTACATGCAAAACCACTTTGAACTTTGGAAGGTACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS CCA 90 bp | ATGTCATGGAAGAAACATCCCGACCACACAAGAACAGGGAACATCTaGTTTCCATACTTCTTAATATGCTTGCAGATCATCCAGTCGATT | + |
Preference number: 5 (lower is better) Translates to: MSWKKHPDHTRTGNI*FPYFLICLQIIQSI Trigger: AATCGACTGGATGATCTGCAAGCATATTAAGAAGTATGGAAACCAGATGTTCCCTGTTCTTGTGTGGTCGGGATGTTTCTTCCATGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202186.4 |
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CDS-3UTR CAA 90 bp | ATAGGGCTACATCAGCAACCCTGCGTCTTTATTCTTCTCACACATAGAGCACAAGATTCAGTTCTGACGTaGCTTTCAAGGCATAAACAT | + |
Preference number: 5 (lower is better) Translates to: IGLHQQPCVFILLTHRAQDSVLT*LSRHKH Trigger: ATGTTTATGCCTTGAAAGCAACGTCAGAACTGAATC...TTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGGGTTGCTGATGTAGCCCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | CCTGCGTCTTTATTCTTCTCACACATAGAGCACAAATCTACAAAAAGCTATCTTTTGATGGATGGGAGTTaGATCTCCTCCAGCATGGTG | + |
Preference number: 5 (lower is better) Translates to: PASLFFSHIEHKSTKSYLLMDGS*ISSSMV Trigger: CACCATGCTGGAGGAGATCAAACTCCCATCCATCAA...AAGATAGCTTTTTGTAGATTTGTGCTCTATGTGTGAGAAGAATAAAGACGCAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS-3UTR CAA 90 bp | AATGGCTTGTACCTTTCACTTAAGAACCCTGAAAGCATTCAGAGCATGTTAGCGATAATATTTGAGACATaGCTGGCCAAAACTGTCCAC | + |
Preference number: 5 (lower is better) Translates to: NGLYLSLKNPESIQSMLAIIFET*LAKTVH Trigger: GTGGACAGTTTTGGCCAGCAATGTCTCAAATATTAT...CGCTAACATGCTCTGAATGCTTTCAGGGTTCTTAAGTGAAAGGTACAAGCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CAA 90 bp | AGTAAAACACGACGGTTCCAGTACCTTCCAAAGTTCAAAGTGGTTTTGCATGTAATTTGCTCTGATACCTaGTTTCCTGACTCTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: SKTRRFQYLPKFKVVLHVICSDT*FPDSSV Trigger: TACAGAAGAGTCAGGAAACAAGGTATCAGAGCAAAT...TACATGCAAAACCACTTTGAACTTTGGAAGGTACTGGAACCGTCGTGTTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS-3UTR CAA 90 bp | GTAAGATTGCCAACTTTCAGATTGGCCATTGAGAAAACACCAATTATCACCACTATTTGCTCTGATACCTaGTTTCCTGACTCTTCTGTA | + |
Preference number: 5 (lower is better) Translates to: VRLPTFRLAIEKTPIITTICSDT*FPDSSV Trigger: TACAGAAGAGTCAGGAAACAAGGTATCAGAGCAAAT...AGTGGTGATAATTGGTGTTTTCTCAATGGCCAATCTGAAAGTTGGCAATCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS-3UTR CAA 90 bp | AACAATGTAAGATTGCCAACTTTCAGATTGGCCATTGAGAAAACACCAATTATCAAAGTGTACACCAGTTaGATGGATGGGAGTTTGATC | + |
Preference number: 5 (lower is better) Translates to: NNVRLPTFRLAIEKTPIIKVYTS*MDGSLI Trigger: GATCAAACTCCCATCCATCAAACTGGTGTACACTTT...GATAATTGGTGTTTTCTCAATGGCCAATCTGAAAGTTGGCAATCTTACATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201711.4 |
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CDS TCA 72 bp | TGGGAGCCACCAGCTTCAGCTCACGGGCCACAACGCTaGGGTTGTTCTTTGCCAGGCATCGAACTGCGATGG | + |
Preference number: 6 (lower is better) Translates to: WEPPASAHGPQR*GCSLPGIELRW Trigger: CCATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGCGTTGTGGCCCGTGAGCTGAAGCTGGTGGCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CAA 90 bp | AGGTTGTTCTTTGCCAGGCATCGAACTGCGATGGTCTCTTCCACTTaGGCGAAGGACACTCGTCCCTCCACGGTACTCCTGCCACGGCGA | + |
Preference number: 6 (lower is better) Translates to: RLFFARHRTAMVSST*AKDTRPSTVLLPRR Trigger: TCGCCGTGGCAGGAGTACCGTGGAGGGACGAGTGTCCTTCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCAAAGAACAACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS TCA 72 bp | CAATCACCAACAGCACCAACACTGCGGCCGCCACTGTaGGTTCAGATCGCAGAGTGGGAGCCACCAGCTTCA | + |
Preference number: 6 (lower is better) Translates to: QSPTAPTLRPPL*VQIAEWEPPAS Trigger: TGAAGCTGGTGGCTCCCACTCTGCGATCTGAACTCACAGTGGCGGCCGCAGTGTTGGTGCTGTTGGTGATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS GCA 72 bp | GCTTGCAGATCATCCAGTCGATTTCTGGAAGAGGGGTaGCTTCGGCTGTACACCTCACAGTCTGTCCCCCGC | + |
Preference number: 6 (lower is better) Translates to: ACRSSSRFLEEG*LRLYTSQSVPR Trigger: GCGGGGGACAGACTGTGAGGTGTACAGCCGAAGGCACCCCTCTTCCAGAAATCGACTGGATGATCTGCAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CCA 72 bp | TTGCCAGGCATCGAACTGCGATGGTCTCTTCCACTTTaGCGAAGGACACTCGTCCCTCCACGGTACTCCTGC | + |
Preference number: 6 (lower is better) Translates to: LPGIELRWSLPL*RRTLVPPRYSC Trigger: GCAGGAGTACCGTGGAGGGACGAGTGTCCTTCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CAA 90 bp | AGAGTGGGAGCCACCAGCTTCAGCTCACGGGCCACAACGCTGAGGTaGTTCTTTGCCAGGCATCGAACTGCGATGGTCTCTTCCACTTTG | + |
Preference number: 6 (lower is better) Translates to: RVGATSFSSRATTLR*FFARHRTAMVSSTL Trigger: CAAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGCGTTGTGGCCCGTGAGCTGAAGCTGGTGGCTCCCACTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS TCA 72 bp | CCTCCTCTGGAACAGGGTCAATGTCTGGCAGGGGGATaGTGTAGCCACTGTCAGCGCTCAGTCTCTGTTCGT | + |
Preference number: 6 (lower is better) Translates to: PPLEQGQCLAGG*CSHCQRSVSVR Trigger: ACGAACAGAGACTGAGCGCTGACAGTGGCTACATCATCCCCCTGCCAGACATTGACCCTGTTCCAGAGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS CAA 72 bp | TTTGCCAGGCATCGAACTGCGATGGTCTCTTCCACTTaGGCGAAGGACACTCGTCCCTCCACGGTACTCCTG | + |
Preference number: 6 (lower is better) Translates to: FARHRTAMVSST*AKDTRPSTVLL Trigger: CAGGAGTACCGTGGAGGGACGAGTGTCCTTCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CAA 90 bp | GTCATAGGAGGCAGGCACCAGCCTCCCGTTATTGTGCAAGGTTACTaGAGTCTCCGGATCTGTGGTGCGGCAAGGTATGATGGCAGAGTC | + |
Preference number: 6 (lower is better) Translates to: VIGGRHQPPVIVQGY*SLRICGAARYDGRV Trigger: GACTCTGCCATCATACCTTGCCGCACCACAGATCCGGAGACTCAAGTAACCTTGCACAATAACGGGAGGCTGGTGCCTGCCTCCTATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS TCA 72 bp | TGTATTGTCCCGGCAACAGGTTCTCCACTATCTCGCTaGGGTGGTAGAAGGAGGGTCTCTTCTCGGGCTCAC | + |
Preference number: 6 (lower is better) Translates to: CIVPATGSPLSR*GGRRRVSSRAH Trigger: GTGAGCCCGAGAAGAGACCCTCCTTCTACCACCTCAGCGAGATAGTGGAGAACCTGTTGCCGGGACAATACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS GCA 72 bp | GAGAGAGACAATGACAATCACCAACAGCACCAACACTaGGGCCGCCACTGTGAGTTCAGATCGCAGAGTGGG | + |
Preference number: 6 (lower is better) Translates to: ERDNDNHQQHQH*GRHCEFRSQSG Trigger: CCCACTCTGCGATCTGAACTCACAGTGGCGGCCGCAGTGTTGGTGCTGTTGGTGATTGTCATTGTCTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CCA 72 bp | GCTGTACACCTCACAGTCTGTCCCCCGCCAGAGCCATaGTGGTCATCTACGAGATCCAAAATGGATGCAGGA | + |
Preference number: 6 (lower is better) Translates to: AVHLTVCPPPEP*WSSTRSKMDAG Trigger: TCCTGCATCCATTTTGGATCTCGTAGATGACCACCATGGCTCTGGCGGGGGACAGACTGTGAGGTGTACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS GCA 72 bp | GTGGTTGTAGTAGCAAGTGTACCATCCGGTGTGGGCTaGGGAGGCGTTAACCACTTCCAGCACTGTGACAAA | + |
Preference number: 6 (lower is better) Translates to: VVVVASVPSGVG*GGVNHFQHCDK Trigger: TTTGTCACAGTGCTGGAAGTGGTTAACGCCTCCGCAGCCCACACCGGATGGTACACTTGCTACTACAACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS GCA 72 bp | CACAACGCTGAGGTTGTTCTTTGCCAGGCATCGAACTaGGATGGTCTCTTCCACTTTGGCGAAGGACACTCG | + |
Preference number: 6 (lower is better) Translates to: HNAEVVLCQASN*DGLFHFGEGHS Trigger: CGAGTGTCCTTCGCCAAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGCGTTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS GCA 72 bp | CTTCAGCTCACGGGCCACAACGCTGAGGTTGTTCTTTaGCAGGCATCGAACTGCGATGGTCTCTTCCACTTT | + |
Preference number: 6 (lower is better) Translates to: LQLTGHNAEVVL*QASNCDGLFHF Trigger: AAAGTGGAAGAGACCATCGCAGTTCGATGCCTGGCAAAGAACAACCTCAGCGTTGTGGCCCGTGAGCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CCA 72 bp | GTACACCTCACAGTCTGTCCCCCGCCAGAGCCATGGTaGTCATCTACGAGATCCAAAATGGATGCAGGAACT | + |
Preference number: 6 (lower is better) Translates to: VHLTVCPPPEPW*SSTRSKMDAGT Trigger: AGTTCCTGCATCCATTTTGGATCTCGTAGATGACCACCATGGCTCTGGCGGGGGACAGACTGTGAGGTGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CAA 72 bp | AGGCCACTGTTGTTCTCCTCACTTCTGATTTCCACGTaGGGGTCGTCTTCTTCAGACATGGGGTGCTGCCAG | + |
Preference number: 6 (lower is better) Translates to: RPLLFSSLLIST*GSSSSDMGCCQ Trigger: CTGGCAGCACCCCATGTCTGAAGAAGACGACCCCAACGTGGAAATCAGAAGTGAGGAGAACAACAGTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202161.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS TCA 72 bp | GTCTCTTCTCGGGCTCACTGTTCCAGCACTGCACCATaGTCTCATAGACTTCACTGGTGGCATGGTCAGGTT | + |
Preference number: 6 (lower is better) Translates to: VSSRAHCSSTAP*SHRLHWWHGQV Trigger: AACCTGACCATGCCACCAGTGAAGTCTATGAGATCATGGTGCAGTGCTGGAACAGTGAGCCCGAGAAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS CCA 72 bp | GGTCATCCCGAGAGGCACAAAGGCCATGTCTGGGTCTaGTACATAGATGTAAATGTGCCTGCCTTCGATCTC | + |
Preference number: 6 (lower is better) Translates to: GHPERHKGHVWV*YIDVNVPAFDL Trigger: GAGATCGAAGGCAGGCACATTTACATCTATGTACCAGACCCAGACATGGCCTTTGTGCCTCTCGGGATGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS CCA 72 bp | GGAATCGGTCATCCCGAGAGGCACAAAGGCCATGTCTaGGTCTGGTACATAGATGTAAATGTGCCTGCCTTC | + |
Preference number: 6 (lower is better) Translates to: GIGHPERHKGHV*VWYIDVNVPAF Trigger: GAAGGCAGGCACATTTACATCTATGTACCAGACCCAGACATGGCCTTTGTGCCTCTCGGGATGACCGATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS CCA 72 bp | TCGGGAATTCCCATCTGGAGTCGTAAGGCAACTGCATaGGGTCCACATAGATATACTCATGTCCATCGGGGC | + |
Preference number: 6 (lower is better) Translates to: SGIPIWSRKATA*GPHRYTHVHRG Trigger: GCCCCGATGGACATGAGTATATCTATGTGGACCCCATGCAGTTGCCTTACGACTCCAGATGGGAATTCCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CAA 90 bp | GTGACAAAGAGGCCACTGTTGTTCTCCTCACTTCTGATTTCCACGTaGGGGTCGTCTTCTTCAGACATGGGGTGCTGCCAGCTCACTTCA | + |
Preference number: 6 (lower is better) Translates to: VTKRPLLFSSLLIST*GSSSSDMGCCQLTS Trigger: TGAAGTGAGCTGGCAGCACCCCATGTCTGAAGAAGACGACCCCAACGTGGAAATCAGAAGTGAGGAGAACAACAGTGGCCTCTTTGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202161.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS CAA 90 bp | GCGGAGGCGTTAACCACTTCCAGCACTGTGACAAAGAGGCCACTGTaGTTCTCCTCACTTCTGATTTCCACGTTGGGGTCGTCTTCTTCA | + |
Preference number: 6 (lower is better) Translates to: AEALTTSSTVTKRPL*FSSLLISTLGSSSS Trigger: TGAAGAAGACGACCCCAACGTGGAAATCAGAAGTGAGGAGAACAACAGTGGCCTCTTTGTCACAGTGCTGGAAGTGGTTAACGCCTCCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS TCA 72 bp | ACTCCTGCCACGGCGAGGGAGCTCTGTGATAATATTTaGGACATTGCTGGCCAAAACTGTCCACGAAGTGTC | + |
Preference number: 6 (lower is better) Translates to: TPATARELCDNI*DIAGQNCPRSV Trigger: GACACTTCGTGGACAGTTTTGGCCAGCAATGTCTCAAATATTATCACAGAGCTCCCTCGCCGTGGCAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CCA 72 bp | GTCACCACGATCGTTTCTCCTGCCTTATACACAGTCTaGCGTGCGTCCATCTCCAGATTCAGTTCTGACGTT | + |
Preference number: 6 (lower is better) Translates to: VTTIVSPALYTV*RASISRFSSDV Trigger: AACGTCAGAACTGAATCTGGAGATGGACGCACGCCAGACTGTGTATAAGGCAGGAGAAACGATCGTGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CCA 72 bp | CGCCAGAGCCATGGTGGTCATCTACGAGATCCAAAATaGATGCAGGAACTAGGGTTGACAGCTCAAACGTGT | + |
Preference number: 6 (lower is better) Translates to: RQSHGGHLRDPK*MQELGLTAQTC Trigger: ACACGTTTGAGCTGTCAACCCTAGTTCCTGCATCCATTTTGGATCTCGTAGATGACCACCATGGCTCTGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CAA 72 bp | GCACATTCATACTCTCCACTGTCCTTCACCGTGGCCTaGGGGACGGTCAAAGTGTACACCAGTTTGATGGAT | + |
Preference number: 6 (lower is better) Translates to: AHSYSPLSFTVA*GTVKVYTSLMD Trigger: ATCCATCAAACTGGTGTACACTTTGACCGTCCCCAAGGCCACGGTGAAGGACAGTGGAGAGTATGAATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CAA 90 bp | ATGTCATCCATCATGTCGATGTCCTCGATGGTCTCGTCCTCTCTCTaGATGAAGGTGGAACTACTGGAACCTGTCTCGATGGCACTCTCT | + |
Preference number: 6 (lower is better) Translates to: MSSIMSMSSMVSSSL*MKVELLEPVSMALS Trigger: AGAGAGTGCCATCGAGACAGGTTCCAGTAGTTCCACCTTCATCAAGAGAGAGGACGAGACCATCGAGGACATCGACATGATGGATGACAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS GCA 72 bp | CCATGTCTGGGTCTGGTACATAGATGTAAATGTGCCTaGCTTCGATCTCACTCTCATCCGTCTGAGTGTGGT | + |
Preference number: 6 (lower is better) Translates to: PCLGLVHRCKCA*LRSHSHPSECG Trigger: ACCACACTCAGACGGATGAGAGTGAGATCGAAGGCAGGCACATTTACATCTATGTACCAGACCCAGACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS CCA 72 bp | CCAAAGGTGGGCTCAATCTCGACGAAGCCTTTCTCGTaGACAGAAATGGTGACTCTCTTCATTTCCTTGACC | + |
Preference number: 6 (lower is better) Translates to: PKVGSISTKPFS*TEMVTLFISLT Trigger: GGTCAAGGAAATGAAGAGAGTCACCATTTCTGTCCACGAGAAAGGCTTCGTCGAGATTGAGCCCACCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CAA 90 bp | GCCTTGGGGACGGTCAAAGTGTACACCAGTTTGATGGATGGGAGTTaGATCTCCTCCAGCATGGTGATACCTTTGTTTCTCACTTCTCCA | + |
Preference number: 6 (lower is better) Translates to: ALGTVKVYTSLMDGS*ISSSMVIPLFLTSP Trigger: TGGAGAAGTGAGAAACAAAGGTATCACCATGCTGGAGGAGATCAAACTCCCATCCATCAAACTGGTGTACACTTTGACCGTCCCCAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS TCA 72 bp | GTCCACATAGATATACTCATGTCCATCGGGGCTGATTaGCTCGATAACCCTCCAGCGAATTTCATACCGTGG | + |
Preference number: 6 (lower is better) Translates to: VHIDILMSIGAD*LDNPPANFIPW Trigger: CCACGGTATGAAATTCGCTGGAGGGTTATCGAGTCAATCAGCCCCGATGGACATGAGTATATCTATGTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CCA 72 bp | CTTGGGGACGGTCAAAGTGTACACCAGTTTGATGGATaGGAGTTTGATCTCCTCCAGCATGGTGATACCTTT | + |
Preference number: 6 (lower is better) Translates to: LGDGQSVHQFDG*EFDLLQHGDTF Trigger: AAAGGTATCACCATGCTGGAGGAGATCAAACTCCCATCCATCAAACTGGTGTACACTTTGACCGTCCCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CCA 72 bp | CTTCTTAATATGCTTGCAGATCATCCAGTCGATTTCTaGAAGAGGGGTGCCTTCGGCTGTACACCTCACAGT | + |
Preference number: 6 (lower is better) Translates to: LLNMLADHPVDF*KRGAFGCTPHS Trigger: ACTGTGAGGTGTACAGCCGAAGGCACCCCTCTTCCAGAAATCGACTGGATGATCTGCAAGCATATTAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202186.4 |
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CDS CAA 90 bp | CACACAAGAACAGGGAACATCTGGTTTCCATACTTCTTAATATGCTaGCAGATCATCCAGTCGATTTCTGGAAGAGGGGTGCCTTCGGCT | + |
Preference number: 6 (lower is better) Translates to: HTRTGNIWFPYFLIC*QIIQSISGRGVPSA Trigger: AGCCGAAGGCACCCCTCTTCCAGAAATCGACTGGATGATCTGCAAGCATATTAAGAAGTATGGAAACCAGATGTTCCCTGTTCTTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202186.4 |
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CDS TCA 72 bp | CACAGTCTGGCGTGCGTCCATCTCCAGATTCAGTTCTaGCGTTGCTTTCAAGGCATAAACATTAAACTCGCT | + |
Preference number: 6 (lower is better) Translates to: HSLACVHLQIQF*RCFQGINIKLA Trigger: AGCGAGTTTAATGTTTATGCCTTGAAAGCAACGTCAGAACTGAATCTGGAGATGGACGCACGCCAGACTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS TCA 72 bp | TCAGACCCTCGGAGTCATCGTCCGAAAGGAGGTTTTTaGCTTCTGAGTCTAGCATGGATTTCTTCTTGTAGG | + |
Preference number: 6 (lower is better) Translates to: SDPRSHRPKGGF*LLSLAWISSCR Trigger: CCTACAAGAAGAAATCCATGCTAGACTCAGAAGTCAAAAACCTCCTTTCGGACGATGACTCCGAGGGTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 |
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CDS GCA 72 bp | TCCCCAACGCATCTCAGAGAAAAGGACGAATTCAGCTaGACAATCTTCTCATTCTCGTTTGGGAGGATAGAG | + |
Preference number: 6 (lower is better) Translates to: SPTHLREKDEFS*TIFSFSFGRIE Trigger: CTCTATCCTCCCAAACGAGAATGAGAAGATTGTGCAGCTGAATTCGTCCTTTTCTCTGAGATGCGTTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000200822.2 ENSMUST00000201711.4 ENSMUST00000202161.4 ENSMUST00000202186.4 ENSMUST00000202681.4 ENSMUST00000202992.4 |
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CDS CCA 72 bp | CAATCCAAAGATGTCCAGGTCTTTCTTCGGCTTCTCTaGGTGTTGGCTCATGAAGCTATCTCTGTTCTTATG | + |
Preference number: 6 (lower is better) Translates to: QSKDVQVFLRLL*VLAHEAISVLM Trigger: CATAAGAACAGAGATAGCTTCATGAGCCAACACCCAGAGAAGCCGAAGAAAGACCTGGACATCTTTGGATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CAA 72 bp | ACGGTCAAAGTGTACACCAGTTTGATGGATGGGAGTTaGATCTCCTCCAGCATGGTGATACCTTTGTTTCTC | + |
Preference number: 6 (lower is better) Translates to: TVKVYTSLMDGS*ISSSMVIPLFL Trigger: GAGAAACAAAGGTATCACCATGCTGGAGGAGATCAAACTCCCATCCATCAAACTGGTGTACACTTTGACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CAA 72 bp | CATCTACGAGATCCAAAATGGATGCAGGAACTAGGGTaGACAGCTCAAACGTGTAACTCTTCACGTCATCCT | + |
Preference number: 6 (lower is better) Translates to: HLRDPKWMQELG*TAQTCNSSRHP Trigger: AGGATGACGTGAAGAGTTACACGTTTGAGCTGTCAACCCTAGTTCCTGCATCCATTTTGGATCTCGTAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CAA 90 bp | CATGGTGGTCATCTACGAGATCCAAAATGGATGCAGGAACTAGGGTaGACAGCTCAAACGTGTAACTCTTCACGTCATCCTCATTTTGAA | + |
Preference number: 6 (lower is better) Translates to: HGGHLRDPKWMQELG*TAQTCNSSRHPHFE Trigger: TTCAAAATGAGGATGACGTGAAGAGTTACACGTTTGAGCTGTCAACCCTAGTTCCTGCATCCATTTTGGATCTCGTAGATGACCACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CAA 90 bp | GCCAAAACTGTCCACGAAGTGTCATTATTACATTTCTTAATATGCTaGCAGATCATCCAGTCGATTTCTGGAAGAGGGGTGCCTTCGGCT | + |
Preference number: 6 (lower is better) Translates to: AKTVHEVSLLHFLIC*QIIQSISGRGVPSA Trigger: AGCCGAAGGCACCCCTCTTCCAGAAATCGACTGGATGATCTGCAAGCATATTAAGAAATGTAATAATGACACTTCGTGGACAGTTTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CAA 90 bp | GTACTCCTGCCACGGCGAGGGAGCTCTGTGATAATATTTGAGACATaGCTGGCCAAAACTGTCCACGAAGTGTCATTATTACATTTCTTA | + |
Preference number: 6 (lower is better) Translates to: VLLPRRGSSVIIFET*LAKTVHEVSLLHFL Trigger: TAAGAAATGTAATAATGACACTTCGTGGACAGTTTTGGCCAGCAATGTCTCAAATATTATCACAGAGCTCCCTCGCCGTGGCAGGAGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CAA 72 bp | CCTTTCAAGCATGGGGACATACTGTGTGGTATCAGCTaGCTTCATGTCCATGTAGTCGCCGTTATTTTCAAA | + |
Preference number: 6 (lower is better) Translates to: PFKHGDILCGIS*LHVHVVAVIFK Trigger: TTTGAAAATAACGGCGACTACATGGACATGAAGCAAGCTGATACCACACAGTATGTCCCCATGCTTGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS CAA 72 bp | ACAGGGAACATCTGGTTTCCATACTTCTTAATATGCTaGCAGATCATCCAGTCGATTTCTGGAAGAGGGGTG | + |
Preference number: 6 (lower is better) Translates to: TGNIWFPYFLIC*QIIQSISGRGV Trigger: CACCCCTCTTCCAGAAATCGACTGGATGATCTGCAAGCATATTAAGAAGTATGGAAACCAGATGTTCCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000202186.4 |
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CDS GCA 72 bp | AGAACAGGGAACATCTGGTTTCCATACTTCTTAATATaGTTGCAGATCATCCAGTCGATTTCTGGAAGAGGG | + |
Preference number: 6 (lower is better) Translates to: RTGNIWFPYFLI*LQIIQSISGRG Trigger: CCCTCTTCCAGAAATCGACTGGATGATCTGCAAGCATATTAAGAAGTATGGAAACCAGATGTTCCCTGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000202186.4 |
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CDS CAA 72 bp | CAGCTCAAACGTGTAACTCTTCACGTCATCCTCATTTaGAACTATAATGGTGTAATGGCCACTGTCTTCTTC | + |
Preference number: 6 (lower is better) Translates to: QLKRVTLHVILI*NYNGVMATVFF Trigger: GAAGAAGACAGTGGCCATTACACCATTATAGTTCAAAATGAGGATGACGTGAAGAGTTACACGTTTGAGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202186.4 ENSMUST00000202681.4 |
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CDS CAA 72 bp | GTCCACGAAGTGTCATTATTACATTTCTTAATATGCTaGCAGATCATCCAGTCGATTTCTGGAAGAGGGGTG | + |
Preference number: 6 (lower is better) Translates to: VHEVSLLHFLIC*QIIQSISGRGV Trigger: CACCCCTCTTCCAGAAATCGACTGGATGATCTGCAAGCATATTAAGAAATGTAATAATGACACTTCGTGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |
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CDS GCA 72 bp | AAAAGACAAAATCACATAACTTCTTGTGCTCTCGTCTaGAGGATTCAATCCAAAGATGTCCAGGTCTTTCTT | + |
Preference number: 6 (lower is better) Translates to: KRQNHITSCALV*RIQSKDVQVFL Trigger: AAGAAAGACCTGGACATCTTTGGATTGAATCCTGCAGACGAGAGCACAAGAAGTTATGTGATTTTGTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000476.15 ENSMUST00000168162.5 ENSMUST00000201711.4 ENSMUST00000202681.4 |