Pregenerated sensors for PDGFD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032006Ensembl transcript IDs: ENSMUST00000058692.9, ENSMUST00000168039.8, ENSMUST00000214892.2
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATAATCAAAGTACAGATGTGCATAGTGTTTTATCGAGGTGGTCTTaGGCTGCAGATACAGTCACATCGCTCATGATGATCCAGCTGGAT | + |
|
Preference number: 1 (lower is better) Translates to: HNQSTDVHSVLSRWS*AADTVTSLMMIQLD Trigger: ATCCAGCTGGATCATCATGAGCGATGTGACTGTATCTGCAGCTCAAGACCACCTCGATAAAACACTATGCACATCTGTACTTTGATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214892.2 |
||
| 3UTR GCA 90 bp | AAGTCCCTGAGCAATTCATTGAGAAGGGTGCTCAGTTACTTAGCTTaGATTGAGAAAATACATGGAAGAGGACTTAATGACTTGATTGAC | + |
|
Preference number: 1 (lower is better) Translates to: KSLSNSLRRVLSYLA*IEKIHGRGLNDLID Trigger: GTCAATCAAGTCATTAAGTCCTCTTCCATGTATTTTCTCAATGCAAGCTAAGTAACTGAGCACCCTTCTCAATGAATTGCTCAGGGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR GCA 90 bp | TCAAAAATTCTACAGCAACCTATTGCTTGCCTATTGAATATCTCTTaGCAATTATCACCACAAGTCCCTGAGCAATTCATTGAGAAGGGT | + |
|
Preference number: 1 (lower is better) Translates to: SKILQQPIACLLNIS*QLSPQVPEQFIEKG Trigger: ACCCTTCTCAATGAATTGCTCAGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAATAGGTTGCTGTAGAATTTTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR GCA 90 bp | AGACCTTATCAAACAGCCCATTTGATTTCCAGTTATGTCAACATTTaGTTATTTCTGACTTTCTATCACCCAAGTCTTGCCATGACTACC | + |
|
Preference number: 1 (lower is better) Translates to: RPYQTAHLISSYVNI*LFLTFYHPSLAMTT Trigger: GGTAGTCATGGCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTGGAAATCAAATGGGCTGTTTGATAAGGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGAACCAAGTTAACTTGACTTCAGGATTCCCTCCTAAACATTTTGTTTGGAGAGAGGTGGTCTTGAGCTaGAGATACAGTCACATCGCT | + |
|
Preference number: 2 (lower is better) Translates to: QNQVNLTSGFPPKHFVWREVVLS*RYSHIA Trigger: AGCGATGTGACTGTATCTGCAGCTCAAGACCACCTC...TCTCCAAACAAAATGTTTAGGAGGGAATCCTGAAGTCAAGTTAACTTGGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214892.2 |
||
| 3UTR-3UTR TCA 90 bp | TCACAGGAAGCTTGCAAATTGGGCCTGGCTTACTTCTTATTGTTCTGTGGCATGACATTTGCTTATTTCTaGCTTTCTATCACCCAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SQEACKLGLAYFLLFCGMTFAYF*LSITQV Trigger: GACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGT...CATGCCACAGAACAATAAGAAGTAAGCCAGGCCCAATTTGCAAGCTTCCTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR GCA 90 bp | TCACAGGAAGCTTGCAAATTGGGCCTGGCTTACTTCTTATTGTTCTGTGGCATGTCCATATGCATTCATTaGACTGAGATTAGAAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SQEACKLGLAYFLLFCGMSICIH*TEIRSF Trigger: GAAGCTTCTAATCTCAGTGCAATGAATGCATATGGA...CATGCCACAGAACAATAAGAAGTAAGCCAGGCCCAATTTGCAAGCTTCCTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR TCA 90 bp | CAACCTATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTTTACTTAGCTTGCATTaGGAAAATACATGGAAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QPIACLLNISCQLSPQVPLLSLH*ENTWKR Trigger: CCTCTTCCATGTATTTTCTCAATGCAAGCTAAGTAA...AGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAATAGGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCCAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCACCCAAGTCTTGCCATaGCTACCATATTTAAAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: FQLCQHLLISDFLSPKSCTQVLP*LPYLKA Trigger: AGCCTTTAAATATGGTAGTCATGGCAAGACTTGGGT...GCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR TCA 90 bp | TTTGTTTGGAGAACAATGAGCAACTTCCTGTTTCTGGACTCAATCTCTTTAGAATTGTTTGGAGAACAATaGGCAACTTCCTGTTTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FVWRTMSNFLFLDSISLELFGEQ*ATSCFW Trigger: CCAGAAACAGGAAGTTGCTCATTGTTCTCCAAACAA...TTCTAAAGAGATTGAGTCCAGAAACAGGAAGTTGCTCATTGTTCTCCAAACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGAACCAAGTTAACTTGACTTCAGGATTCCCTCCTAAACATTTTGTTTGGAGACAGCAACCTATTGCTTaGCTATTGAATATCTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: QNQVNLTSGFPPKHFVWRQQPIA*LLNISC Trigger: GCAAGAGATATTCAATAGGCAAGCAATAGGTTGCTG...TCTCCAAACAAAATGTTTAGGAGGGAATCCTGAAGTCAAGTTAACTTGGTTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGAACAATGAGCAACTTCCTGTTTCTGGACTCAATCTCTTTAGAAAAGATCAAAAAGCTTTCCAGTaGAACAGCAGGACCAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: LENNEQLPVSGLNLFRKDQKAFQ*NSRTKS Trigger: AGATTTGGTCCTGCTGTTCCACTGGAAAGCTTTTTG...ATCTTTTCTAAAGAGATTGAGTCCAGAAACAGGAAGTTGCTCATTGTTCTCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGAAGGGTGCTCAGTTACTTAGCTTGCATTGAGAAAATACATGGAAGAGGAGAAATTAATGATATTTaGTTCTTCTTGCCATGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LRRVLSYLACIEKIHGRGEINDI*FFLPWH Trigger: GTGCCATGGCAAGAAGAAGCAAATATCATTAATTTC...TCCTCTTCCATGTATTTTCTCAATGCAAGCTAAGTAACTGAGCACCCTTCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR GCA 90 bp | CAACCTATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTGAAATTAATGATATTTaGTTCTTCTTGCCATGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: QPIACLLNISCQLSPQVPEINDI*FFLPWH Trigger: GTGCCATGGCAAGAAGAAGCAAATATCATTAATTTC...AGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAATAGGTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGAAGGGTGCTCAGTTACTTAGCTTGCATTGAGAAAATACATGGAAGAGGACTCAGTTACTTAGCTTaGATTGAGAAAATACATGGA | + |
|
Preference number: 2 (lower is better) Translates to: LRRVLSYLACIEKIHGRGLSYLA*IEKIHG Trigger: TCCATGTATTTTCTCAATGCAAGCTAAGTAACTGAG...TCCTCTTCCATGTATTTTCTCAATGCAAGCTAAGTAACTGAGCACCCTTCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR GCA 90 bp | CAACCTATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTCTCAGTTACTTAGCTTaGATTGAGAAAATACATGGA | + |
|
Preference number: 2 (lower is better) Translates to: QPIACLLNISCQLSPQVPLSYLA*IEKIHG Trigger: TCCATGTATTTTCTCAATGCAAGCTAAGTAACTGAG...AGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAATAGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGAGAACAATGAGCAACTTCCTGTTTCTGGACTCAATCTCTTTAGAAAAGATCAGCAACCTATTGCTTaGCTATTGAATATCTCTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LENNEQLPVSGLNLFRKDQQPIA*LLNISC Trigger: GCAAGAGATATTCAATAGGCAAGCAATAGGTTGCTG...ATCTTTTCTAAAGAGATTGAGTCCAGAAACAGGAAGTTGCTCATTGTTCTCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR CCA 90 bp | AATCTCTTTAGAAAAGATATAGAGGCACCACTGGGGAAACTTAACTCACTCCTATATCCTGTATTACTTTaGCATAGTTGTGGAGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: NLFRKDIEAPLGKLNSLLYPVLL*HSCGDR Trigger: TCTGTCTCCACAACTATGCCAAAGTAATACAGGATA...TAGGAGTGAGTTAAGTTTCCCCAGTGGTGCCTCTATATCTTTTCTAAAGAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR CCA 90 bp | TATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCATGACTTATCCTGTATTACTTTaGCATAGTTGTGGAGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: YVNICLFLTFYHPSLAMTYPVLL*HSCGDR Trigger: TCTGTCTCCACAACTATGCCAAAGTAATACAGGATA...AGTCATGGCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCATATCAAAGTACAGATGTaGATAGTGTTTTATCGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: QLCQHLLISDFLSPKSCHIKVQM*IVFYRG Trigger: ACCTCGATAAAACACTATGCACATCTGTACTTTGAT...ATGGCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214892.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGGAAGCTTGCAAATTGGGCCTGGCTTACTTCTTATTGTTCTGTGGCATGTTTATCGAGGTGGTCTaGAGCTGCAGATACAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SQEACKLGLAYFLLFCGMFIEVV*SCRYSH Trigger: GTGACTGTATCTGCAGCTCAAGACCACCTCGATAAA...CATGCCACAGAACAATAAGAAGTAAGCCAGGCCCAATTTGCAAGCTTCCTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214892.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGGAAGCTTGCAAATTGGGCCTGGCTTACTTCTTATTGTTCTGTGGCATGGTAAGCATAGATTTGTaGAGCACACAGCTGATAACT | + |
|
Preference number: 3 (lower is better) Translates to: SQEACKLGLAYFLLFCGMVSIDL*STQLIT Trigger: AGTTATCAGCTGTGTGCTCAACAAATCTATGCTTAC...CATGCCACAGAACAATAAGAAGTAAGCCAGGCCCAATTTGCAAGCTTCCTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGGAAGCTTGCAAATTGGGCCTGGCTTACTTCTTATTGTTCTGTGGCATGCCTATTGCTTGCCTATaGAATATCTCTTGCCAATTA | + |
|
Preference number: 3 (lower is better) Translates to: SQEACKLGLAYFLLFCGMPIACL*NISCQL Trigger: TAATTGGCAAGAGATATTCAATAGGCAAGCAATAGG...CATGCCACAGAACAATAAGAAGTAAGCCAGGCCCAATTTGCAAGCTTCCTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCAACCTATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCGCCATATTCTTAGCTTaGCCCCTTCTCTTGAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: QQPIACLLNISCQLSPQVAIFLA*PLLLKC Trigger: ACATTTCAAGAGAAGGGGCAAAGCTAAGAATATGGC...GACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAATAGGTTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214892.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGAACAATGAGCAACTTCCTGTTTCTGGACTCAATCTCTTTAGAAAAGATCAGAACCAAGTTAACTaGACTTCAGGATTCCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LENNEQLPVSGLNLFRKDQNQVN*TSGFPP Trigger: AGGAGGGAATCCTGAAGTCAAGTTAACTTGGTTCTG...ATCTTTTCTAAAGAGATTGAGTCCAGAAACAGGAAGTTGCTCATTGTTCTCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGAGAACAATGAGCAACTTCCTGTTTCTGGACTCAATCTCTTTAGAAAAGATCCTATTGAATATCTCTaGCCAATTATCACCACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LENNEQLPVSGLNLFRKDPIEYL*PIITTS Trigger: ACTTGTGGTGATAATTGGCAAGAGATATTCAATAGG...ATCTTTTCTAAAGAGATTGAGTCCAGAAACAGGAAGTTGCTCATTGTTCTCCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCATCCTATTGCTTGCCTATaGAATATCTCTTGCCAATTA | + |
|
Preference number: 3 (lower is better) Translates to: QLCQHLLISDFLSPKSCHPIACL*NISCQL Trigger: TAATTGGCAAGAGATATTCAATAGGCAAGCAATAGG...ATGGCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTGAGCAACCAGGGCATCAGCAGTaGGAGTGGGGTCCGTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: IACLLNISCQLSPQVPEQPGHQQ*EWGPLL Trigger: CAATAACGGACCCCACTCTCACTGCTGATGCCCTGG...TTGCTCAGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCTTGCCACCACAGCGCTaGACGAGGAGGCATCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FQLCQHLLISDFLSPKSCLPPQR*TRRHRG Trigger: CCCACGATGCCTCCTCGTGCAGCGCTGTGGTGGCAA...GCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR GCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTTGCCACCACAGCGCTaGACGAGGAGGCATCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASLPPQR*TRRHRG Trigger: CCCACGATGCCTCCTCGTGCAGCGCTGTGGTGGCAA...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR TCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTCCAGGGCATCAGCAGTaGGAGTGGGGTCCGTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFPGHQQ*EWGPLL Trigger: CAATAACGGACCCCACTCTCACTGCTGATGCCCTGG...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCCAGGGCATCAGCAGTaGGAGTGGGGTCCGTTATTG | + |
|
Preference number: 4 (lower is better) Translates to: FQLCQHLLISDFLSPKSCPGHQQ*EWGPLL Trigger: CAATAACGGACCCCACTCTCACTGCTGATGCCCTGG...GCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTTTCCGCAACCACAGTTaGCACCACAGCGCTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFFRNHS*HHSAAR Trigger: TCGTGCAGCGCTGTGGTGGCAACTGTGGTTGCGGAA...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR CCA 90 bp | ATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTGAGCAACACGAGGAGGCATCGTaGGAAGAAGACTGCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IACLLNISCQLSPQVPEQHEEAS*EEDCIG Trigger: ACCAATGCAGTCTTCTTCCCACGATGCCTCCTCGTG...TTGCTCAGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGCATTGCGCAAAGCTTTaGTGGATGCTCTCTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSNISICIHCTEIRSFLGHCAKL*WMLSAE Trigger: CTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATG...CCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | AATCTCTTTAGAAAAGATATAGAGGCACCACTGGGGAAACTTAACTCACTCCTACATTGCGCAAAGCTTTaGTGGATGCTCTCTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NLFRKDIEAPLGKLNSLLHCAKL*WMLSAE Trigger: CTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATG...TAGGAGTGAGTTAAGTTTCCCCAGTGGTGCCTCTATATCTTTTCTAAAGAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | CAACCTATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTCCATTGCTTGTCACCTaGATGTTCTCCTCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QPIACLLNISCQLSPQVPPLLVT*MFSSLW Trigger: CCAGAGAGAGGAGAACATTCAGGTGACAAGCAATGG...AGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAATAGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAGAACAATGAGCAACTTCCTGTTTCTGGACTCAATCTCTTTAGAAAAGATTTCCCAGTTGGTCTCTaGGGCTGCTTCCGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LENNEQLPVSGLNLFRKDFPVGL*GCFRLE Trigger: TTCCAACCGGAAGCAGCCTCAGAGACCAACTGGGAA...ATCTTTTCTAAAGAGATTGAGTCCAGAAACAGGAAGTTGCTCATTGTTCTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | TTCCAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCTTCCCAGTTGGTCTCTaGGGCTGCTTCCGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FQLCQHLLISDFLSPKSCFPVGL*GCFRLE Trigger: TTCCAACCGGAAGCAGCCTCAGAGACCAACTGGGAA...GCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGCTGAGGTTCACAGAGTaGTTCCTGGGAGTGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QSNISICIHCTEIRSFLGLRFTE*FLGVQL Trigger: CAGTTGCACTCCCAGGAATCACTCTGTGAACCTCAG...CCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR TCA 90 bp | AATCTCTTTAGAAAAGATATAGAGGCACCACTGGGGAAACTTAACTCACTCCTATGCTCTCATCTCTCCTaGGGTTGGCATTGCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLFRKDIEAPLGKLNSLLCSHLS*GWHCAK Trigger: CTTTGCGCAATGCCAACCTCAGGAGAGATGAGAGCA...TAGGAGTGAGTTAAGTTTCCCCAGTGGTGCCTCTATATCTTTTCTAAAGAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | CAACCTATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTTTGATGGATGCTCTCTaGGGAGTCGCAAAAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QPIACLLNISCQLSPQVPLMDAL*GVAKVS Trigger: GGACACTTTTGCGACTCCGCAGAGAGCATCCATCAA...AGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAATAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGAAGGGTGCTCAGTTACTTAGCTTGCATTGAGAAAATACATGGAAGAGGATCGTGGGAAGAAGACTaGATTGGTCAGCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRRVLSYLACIEKIHGRGSWEED*IGQLQL Trigger: GAGCTGAAGCTGACCAATGCAGTCTTCTTCCCACGA...TCCTCTTCCATGTATTTTCTCAATGCAAGCTAAGTAACTGAGCACCCTTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR CCA 90 bp | CAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCATCAGAAGCAGGTTCCTTaGGTAGCTGTTCGGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QLCQHLLISDFLSPKSCHQKQVP*VAVREA Trigger: CGCTTCCCGAACAGCTACCCAAGGAACCTGCTTCTG...ATGGCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGATCCGTGTTTTCTCCTaGGAACGGAGCCACCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSNISICIHCTEIRSFLGIRVFS*ERSHHV Trigger: GACATGGTGGCTCCGTTCCCAGGAGAAAACACGGAT...CCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CCA 90 bp | CAGAACCAAGTTAACTTGACTTCAGGATTCCCTCCTAAACATTTTGTTTGGAGAGGAAGAAGACTGCATTaGTCAGCTTCAGCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QNQVNLTSGFPPKHFVWRGRRLH*SASAPP Trigger: GGGAGGAGCTGAAGCTGACCAATGCAGTCTTCTTCC...TCTCCAAACAAAATGTTTAGGAGGGAATCCTGAAGTCAAGTTAACTTGGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| 3UTR CAA 72 bp | CTTGCCAATTATCACCACAAGTCCCTGAGCAATTCATaGAGAAGGGTGCTCAGTTACTTAGCTTGCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LANYHHKSLSNS*RRVLSYLACIE Trigger: CTCAATGCAAGCTAAGTAACTGAGCACCCTTCTCAATGAATTGCTCAGGGACTTGTGGTGATAATTGGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTCATTGCGCAAAGCTTTaGTGGATGCTCTCTGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFHCAKL*WMLSAE Trigger: CTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATG...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTGAGCAAAACAGTGCTGCTCTCTaGGACTTCTTCAACTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IACLLNISCQLSPQVPEQNSAAL*DFFNFH Trigger: GTGGAAGTTGAAGAAGTCTCAGAGAGCAGCACTGTT...TTGCTCAGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTTCCCAGTTGGTCTCTaGGGCTGCTTCCGGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASFPVGL*GCFRLE Trigger: TTCCAACCGGAAGCAGCCTCAGAGACCAACTGGGAA...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTGAGCAACTTTGCCCCTTCTCTTaGAATGTCCAGGCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: IACLLNISCQLSPQVPEQLCPFS*NVQAQT Trigger: AGTTTGAGCCTGGACATTTCAAGAGAAGGGGCAAAG...TTGCTCAGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR TCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTTGCTCTCATCTCTCCTaGGGTTGGCATTGCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFCSHLS*GWHCAK Trigger: CTTTGCGCAATGCCAACCTCAGGAGAGATGAGAGCA...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | AATCTCTTTAGAAAAGATATAGAGGCACCACTGGGGAAACTTAACTCACTCCTATTGATGGATGCTCTCTaGGGAGTCGCAAAAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NLFRKDIEAPLGKLNSLLLMDAL*GVAKVS Trigger: GGACACTTTTGCGACTCCGCAGAGAGCATCCATCAA...TAGGAGTGAGTTAAGTTTCCCCAGTGGTGCCTCTATATCTTTTCTAAAGAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCTGTCTTCCCTGAGCTaGATGTGCAGGACTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FQLCQHLLISDFLSPKSCLSSLS*MCRTSS Trigger: ACTGGAAGTCCTGCACATGCAGCTCAGGGAAGACAG...GCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR CCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTCAGAAGCAGGTTCCTTaGGTAGCTGTTCGGGAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASQKQVP*VAVREA Trigger: CGCTTCCCGAACAGCTACCCAAGGAACCTGCTTCTG...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTAGTGTTAGACTCACCGAATAAATCAGTTTTCTTTTCTACTCTAAAGGCAATCCGTGTTTTCTCCTaGGAACGGAGCCACCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVVLDSPNKSVFFSTLKAIRVFS*ERSHHV Trigger: GACATGGTGGCTCCGTTCCCAGGAGAAAACACGGAT...TGCCTTTAGAGTAGAAAAGAAAACTGATTTATTCGGTGAGTCTAACACTACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTAGTGTTAGACTCACCGAATAAATCAGTTTTCTTTTCTACTCTAAAGGCAACAAGTCATCTCTCCTaGGGTTGGCATTGCGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVVLDSPNKSVFFSTLKATSHLS*GWHCAK Trigger: CTTTGCGCAATGCCAACCTCAGGAGAGATGACTTGT...TGCCTTTAGAGTAGAAAAGAAAACTGATTTATTCGGTGAGTCTAACACTACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR TCA 90 bp | AATCTCTTTAGAAAAGATATAGAGGCACCACTGGGGAAACTTAACTCACTCCTAAACAGTGCTGCTCTCTaGGACTTCTTCAACTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLFRKDIEAPLGKLNSLLNSAAL*DFFNFH Trigger: GTGGAAGTTGAAGAAGTCTCAGAGAGCAGCACTGTT...TAGGAGTGAGTTAAGTTTCCCCAGTGGTGCCTCTATATCTTTTCTAAAGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGCAGAGAAAGAGCTTGTaGCTGATTCCCAGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSNISICIHCTEIRSFLGQRKSL*LIPSWS Trigger: AGACCAACTGGGAATCAGTCACAAGCTCTTTCTCTG...CCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | AATCTCTTTAGAAAAGATATAGAGGCACCACTGGGGAAACTTAACTCACTCCTACAGAGAAAGAGCTTGTaGCTGATTCCCAGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFRKDIEAPLGKLNSLLQRKSL*LIPSWS Trigger: AGACCAACTGGGAATCAGTCACAAGCTCTTTCTCTG...TAGGAGTGAGTTAAGTTTCCCCAGTGGTGCCTCTATATCTTTTCTAAAGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTCTGAGGTTCACAGAGTaGTTCCTGGGAGTGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASLRFTE*FLGVQL Trigger: CAGTTGCACTCCCAGGAATCACTCTGTGAACCTCAG...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTCTGGTACAAGTCTGTaGGGTGATTGCTCTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSNISICIHCTEIRSFLGSGTSL*GDCSHL Trigger: GAGATGAGAGCAATCACCTCACAGACTTGTACCAGA...CCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTTCGTGGGAAGAAGACTaGATTGGTCAGCTTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFSWEED*IGQLQL Trigger: GAGCTGAAGCTGACCAATGCAGTCTTCTTCCCACGA...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR GCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTCTGTCTTCCCTGAGCTaGATGTGCAGGACTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASLSSLS*MCRTSS Trigger: ACTGGAAGTCCTGCACATGCAGCTCAGGGAAGACAG...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR GCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTGAGGTGGTCTTGAGCTaGAGATACAGTCACATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFEVVLS*RYSHIA Trigger: AGCGATGTGACTGTATCTGCAGCTCAAGACCACCTC...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAAGGAAGAAGACTGCATTaGTCAGCTTCAGCTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQGRRLH*SASAPP Trigger: GGGAGGAGCTGAAGCTGACCAATGCAGTCTTCTTCC...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAACACGAGGAGGCATCGTaGGAAGAAGACTGCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQHEEAS*EEDCIG Trigger: ACCAATGCAGTCTTCTTCCCACGATGCCTCCTCGTG...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR TCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTCAGAGAAAGAGCTTGTaGCTGATTCCCAGTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFQRKSL*LIPSWS Trigger: AGACCAACTGGGAATCAGTCACAAGCTCTTTCTCTG...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | TATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCATGACTTCTGGTACAAGTCTGTaGGGTGATTGCTCTCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: YVNICLFLTFYHPSLAMTSGTSL*GDCSHL Trigger: GAGATGAGAGCAATCACCTCACAGACTTGTACCAGA...AGTCATGGCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAATTGATGGATGCTCTCTaGGGAGTCGCAAAAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQLMDAL*GVAKVS Trigger: GGACACTTTTGCGACTCCGCAGAGAGCATCCATCAA...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCAAAGCTTTGATGGATaGTCTCTGCGGAGTCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FQLCQHLLISDFLSPKSCQSFDG*SLRSRK Trigger: TTTGCGACTCCGCAGAGAGCATCCATCAAAGCTTTG...GCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTCAAAGCTTTGATGGATaGTCTCTGCGGAGTCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFQSFDG*SLRSRK Trigger: TTTGCGACTCCGCAGAGAGCATCCATCAAAGCTTTG...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | AATCTCTTTAGAAAAGATATAGAGGCACCACTGGGGAAACTTAACTCACTCCTATCTGCACATGGCCATTaGTTGTCACCTGAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLFRKDIEAPLGKLNSLLSAHGH*LSPECS Trigger: AGAACATTCAGGTGACAAGCAATGGCCATGTGCAGA...TAGGAGTGAGTTAAGTTTCCCCAGTGGTGCCTCTATATCTTTTCTAAAGAGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAACCTATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCTTCTCCAGATCATCTTaGCAAGACACTGGATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QQPIACLLNISCQLSPQVFSRSS*QDTGLK Trigger: CTTCAATCCAGTGTCTTGGCAAGATGATCTGGAGAA...GACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAATAGGTTGCTG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTAGTGTTAGACTCACCGAATAAATCAGTTTTCTTTTCTACTCTAAAGGCATCACAGAGTGATTCCTaGGAGTGCAACTGTAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVVLDSPNKSVFFSTLKASQSDS*ECNCNA Trigger: AGCGTTACAGTTGCACTCCCAGGAATCACTCTGTGA...TGCCTTTAGAGTAGAAAAGAAAACTGATTTATTCGGTGAGTCTAACACTACCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR TCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTAACAGTGCTGCTCTCTaGGACTTCTTCAACTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASNSAAL*DFFNFH Trigger: GTGGAAGTTGAAGAAGTCTCAGAGAGCAGCACTGTT...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAACTTCCGATCATGGTATaGCCTGCCTCTATAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQLPIMV*PASIMR Trigger: CCTCATTATAGAGGCAGGTCATACCATGATCGGAAG...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTCTTCCGATCATGGTATaGCCTGCCTCTATAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASLPIMV*PASIMR Trigger: CCTCATTATAGAGGCAGGTCATACCATGATCGGAAG...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTCTTTGCCCCTTCTCTTaGAATGTCCAGGCTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASLCPFS*NVQAQT Trigger: AGTTTGAGCCTGGACATTTCAAGAGAAGGGGCAAAG...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR TCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTACAAGTCTGTGAGGTaGTTGCTCTCATCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASYKSVR*LLSSLL Trigger: CAGGAGAGATGAGAGCAATCACCTCACAGACTTGTA...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAATACAAGTCTGTGAGGTaGTTGCTCTCATCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQYKSVR*LLSSLL Trigger: CAGGAGAGATGAGAGCAATCACCTCACAGACTTGTA...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAACCTATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCTTGAATCCAGGTTTTaGCACAAAGTAGTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQPIACLLNISCQLSPQVLESRF*HKVVIR Trigger: TCTGATGACTACTTTGTGGCAAAACCTGGATTCAAG...GACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAATAGGTTGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTCTCCAGATCATCTTaGCAAGACACTGGATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSNISICIHCTEIRSFLGFSRSS*QDTGLK Trigger: CTTCAATCCAGTGTCTTGGCAAGATGATCTGGAGAA...CCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTGATCATGGTATGACCTaGCTCTATAATGAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFDHGMT*LYNEGC Trigger: ACACCCCTCATTATAGAGGCAGGTCATACCATGATC...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTAGTGTTAGACTCACCGAATAAATCAGTTTTCTTTTCTACTCTAAAGGCAATGTTCTCCTCTCTCTaGTACAAGTCATCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVVLDSPNKSVFFSTLKAMFSSL*YKSSLL Trigger: CAGGAGAGATGACTTGTACCAGAGAGAGGAGAACAT...TGCCTTTAGAGTAGAAAAGAAAACTGATTTATTCGGTGAGTCTAACACTACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR CCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTCACAGAGTGATTCCTaGGAGTGCAACTGTAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASSQSDS*ECNCNA Trigger: AGCGTTACAGTTGCACTCCCAGGAATCACTCTGTGA...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| 3UTR CAA 72 bp | CAGGAAGCTTGCAAATTGGGCCTGGCTTACTTCTTATaGTTCTGTGGCATGCTTGACAACAATATACTATTT | + |
|
Preference number: 4 (lower is better) Translates to: QEACKLGLAYFL*FCGMLDNNILF Trigger: AAATAGTATATTGTTGTCAAGCATGCCACAGAACAATAAGAAGTAAGCCAGGCCCAATTTGCAAGCTTCCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTCTGCACATGGCCATTaGTTGTCACCTGAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASSAHGH*LSPECS Trigger: AGAACATTCAGGTGACAAGCAATGGCCATGTGCAGA...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAATCTGCACATGGCCATTaGTTGTCACCTGAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQSAHGH*LSPECS Trigger: AGAACATTCAGGTGACAAGCAATGGCCATGTGCAGA...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | TTCCAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCTTCTCCAGATCATCTTaGCAAGACACTGGATTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQLCQHLLISDFLSPKSCFSRSS*QDTGLK Trigger: CTTCAATCCAGTGTCTTGGCAAGATGATCTGGAGAA...GCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTGATCATGGTATGACCTaGCTCTATAATGAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASDHGMT*LYNEGC Trigger: ACACCCCTCATTATAGAGGCAGGTCATACCATGATC...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAAGATCATGGTATGACCTaGCTCTATAATGAGGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQDHGMT*LYNEGC Trigger: ACACCCCTCATTATAGAGGCAGGTCATACCATGATC...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| 3UTR CAA 72 bp | AGAACCTTTAGAATATATGTGTCAGTAAGCATAGATTaGTTGAGCACACAGCTGATAACTTGGCTTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RTFRIYVSVSID*LSTQLITWLRQ Trigger: CTGTCTAAGCCAAGTTATCAGCTGTGTGCTCAACAAATCTATGCTTACTGACACATATATTCTAAAGGTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTAACTTCAATACCTCATaGTACTTCTTCACTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNISICIHCTEIRSFLGFNFNTS*YFFTVF Trigger: GAAGACAGTGAAGAAGTATCATGAGGTATTGAAGTT...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR GCA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTCTTGAATCCAGGTTTTaGCACAAAGTAGTCATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TNKATFPYAFIALRLEASLESRF*HKVVIR Trigger: TCTGATGACTACTTTGTGGCAAAACCTGGATTCAAG...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAAAACTTCAATACCTCATaGTACTTCTTCACTGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQNFNTS*YFFTVF Trigger: GAAGACAGTGAAGAAGTATCATGAGGTATTGAAGTT...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS TCA 90 bp | CTGTTCGGGAAGCGAGGACTCTGCACATGGCCATTGCTTGTCACCTaGATGTTCTCCTCTCTCTGGTACAAGTCATCTCTCCTGAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFGKRGLCTWPLLVT*MFSSLWYKSSLLRL Trigger: CAACCTCAGGAGAGATGACTTGTACCAGAGAGAGGAGAACATTCAGGTGACAAGCAATGGCCATGTGCAGAGTCCTCGCTTCCCGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS GCA 90 bp | TCCTTGGGTAGCTGTTCGGGAAGCGAGGACTCTGCACATGGCCATTaGTTGTCACCTGAATGTTCTCCTCTCTCTGGTACAAGTCATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLGSCSGSEDSAHGH*LSPECSPLSGTSHL Trigger: GAGATGACTTGTACCAGAGAGAGGAGAACATTCAGGTGACAAGCAATGGCCATGTGCAGAGTCCTCGCTTCCCGAACAGCTACCCAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS GCA 90 bp | GCTCTCATCTCTCCTGAGGTTGGCATTGCGCAAAGCTTTGATGGATaGTCTCTGCGGAGTCGCAAAAGTGTCCGGATAGCAGCTAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALISPEVGIAQSFDG*SLRSRKSVRIAAKV Trigger: AACTTTAGCTGCTATCCGGACACTTTTGCGACTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS GCA 90 bp | CAAGTCATCTCTCCTGAGGTTGGCATTGCGCAAAGCTTTGATGGATaGTCTCTGCGGAGTCGCAAAAGTGTCCGGATAGCAGCTAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QVISPEVGIAQSFDG*SLRSRKSVRIAAKV Trigger: AACTTTAGCTGCTATCCGGACACTTTTGCGACTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR CAA 90 bp | TCACAGGAAGCTTGCAAATTGGGCCTGGCTTACTTCTTATTGTTCTGTGGCATGTCAGAAGCAGGTTCCTaGGGTAGCTGTTCGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQEACKLGLAYFLLFCGMSEAGS*GSCSGS Trigger: GCTTCCCGAACAGCTACCCAAGGAACCTGCTTCTGA...CATGCCACAGAACAATAAGAAGTAAGCCAGGCCCAATTTGCAAGCTTCCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS TCA 90 bp | ACGTTATCCTTGGAGGGATCTCCTTGTGGCCACACCATCTTCCTCTaGCAACAGTGCTGCTCTCTGAGACTTCTTCAACTTCCACAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLSLEGSPCGHTIFL*QQCCSLRLLQLPQS Trigger: ACTTTGTGGAAGTTGAAGAAGTCTCAGAGAGCAGCACTGTTGTCAGAGGAAGATGGTGTGGCCACAAGGAGATCCCTCCAAGGATAACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | AATCTCTTTAGAAAAGATATAGAGGCACCACTGGGGAAACTTAACTCACTCCTAGTTCCGCAACCACAGTaGCCACCACAGCGCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: NLFRKDIEAPLGKLNSLLVPQPQ*PPQRCT Trigger: CGTGCAGCGCTGTGGTGGCAACTGTGGTTGCGGAAC...TAGGAGTGAGTTAAGTTTCCCCAGTGGTGCCTCTATATCTTTTCTAAAGAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGGTTCCGCAACCACAGTaGCCACCACAGCGCTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: QSNISICIHCTEIRSFLGVPQPQ*PPQRCT Trigger: CGTGCAGCGCTGTGGTGGCAACTGTGGTTGCGGAAC...CCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS TCA 90 bp | AGGCTCAAACTTCAATACCTCATGATACTTCTTCACTGTCTTCCCTaGGCTGCATGTGCAGGACTTCCAGTTGACAGTTCCGCAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: RLKLQYLMILLHCLP*AACAGLPVDSSATT Trigger: TGTGGTTGCGGAACTGTCAACTGGAAGTCCTGCACATGCAGCTCAGGGAAGACAGTGAAGAAGTATCATGAGGTATTGAAGTTTGAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS CCA 90 bp | TTAATCTGGTTTGTTCTTGACGTTATCCTTGGAGGGATCTCCTTGTaGCCACACCATCTTCCTCTGACAACAGTGCTGCTCTCTGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LIWFVLDVILGGISL*PHHLPLTTVLLSET Trigger: AGTCTCAGAGAGCAGCACTGTTGTCAGAGGAAGATGGTGTGGCCACAAGGAGATCCCTCCAAGGATAACGTCAAGAACAAACCAGATTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | ATTGCTTGCCTATTGAATATCTCTTGCCAATTATCACCACAAGTCCCTGAGCAAGTGACTGATTCCCAGTaGGTCTCTGAGGCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IACLLNISCQLSPQVPEQVTDSQ*VSEAAS Trigger: GGAAGCAGCCTCAGAGACCAACTGGGAATCAGTCAC...TTGCTCAGGGACTTGTGGTGATAATTGGCAAGAGATATTCAATAGGCAAGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | CAGAACCAAGTTAACTTGACTTCAGGATTCCCTCCTAAACATTTTGTTTGGAGAGTGACTGATTCCCAGTaGGTCTCTGAGGCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QNQVNLTSGFPPKHFVWRVTDSQ*VSEAAS Trigger: GGAAGCAGCCTCAGAGACCAACTGGGAATCAGTCAC...TCTCCAAACAAAATGTTTAGGAGGGAATCCTGAAGTCAAGTTAACTTGGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | CAGAACCAAGTTAACTTGACTTCAGGATTCCCTCCTAAACATTTTGTTTGGAGAGCATTGCGCAAAGCTTaGATGGATGCTCTCTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QNQVNLTSGFPPKHFVWRALRKA*MDALCG Trigger: TCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGC...TCTCCAAACAAAATGTTTAGGAGGGAATCCTGAAGTCAAGTTAACTTGGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | AATCTCTTTAGAAAAGATATAGAGGCACCACTGGGGAAACTTAACTCACTCCTAGCATTGCGCAAAGCTTaGATGGATGCTCTCTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: NLFRKDIEAPLGKLNSLLALRKA*MDALCG Trigger: TCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGC...TAGGAGTGAGTTAAGTTTCCCCAGTGGTGCCTCTATATCTTTTCTAAAGAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTTCAGAAGCAGGTTCCTaGGGTAGCTGTTCGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNISICIHCTEIRSFLGFSEAGS*GSCSGS Trigger: GCTTCCCGAACAGCTACCCAAGGAACCTGCTTCTGA...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTGTGACTGATTCCCAGTaGGTCTCTGAGGCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SNISICIHCTEIRSFLGFVTDSQ*VSEAAS Trigger: GGAAGCAGCCTCAGAGACCAACTGGGAATCAGTCAC...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGAAGGGTGCTCAGTTACTTAGCTTGCATTGAGAAAATACATGGAAGAGGAGCTTTGCCCCTTCTCTaGAAATGTCCAGGCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRRVLSYLACIEKIHGRGALPLL*KCPGSN Trigger: GTTTGAGCCTGGACATTTCAAGAGAAGGGGCAAAGC...TCCTCTTCCATGTATTTTCTCAATGCAAGCTAAGTAACTGAGCACCCTTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS TCA 90 bp | AAGTCATACCTACAAATGTCATTTTCTGCTTCCTCTAGTCCGAATTaGTGGTCAAAGGACAGTTGTATCCGTGTTTTCTCCTGGGAACGG | + |
|
Preference number: 5 (lower is better) Translates to: KSYLQMSFSASSSPN*WSKDSCIRVFSWER Trigger: CCGTTCCCAGGAGAAAACACGGATACAACTGTCCTTTGACCATCAATTCGGACTAGAGGAAGCAGAAAATGACATTTGTAGGTATGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTCAGAAGCAGGTTCCTaGGGTAGCTGTTCGGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TNKATFPYAFIALRLEASSEAGS*GSCSGS Trigger: GCTTCCCGAACAGCTACCCAAGGAACCTGCTTCTGA...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGCTGTCCAGGTCCACTTaGGACTTCCGATCATGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: QSNISICIHCTEIRSFLGLSRST*DFRSWY Trigger: ATACCATGATCGGAAGTCCAAAGTGGACCTGGACAG...CCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR CAA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTGCATTGCGCAAAGCTTaGATGGATGCTCTCTGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TNKATFPYAFIALRLEASALRKA*MDALCG Trigger: TCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGC...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | AGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTAGGGTTTTCATCTCTCCTGAGGTaGGCATTGCGCAAAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SNISICIHCTEIRSFLGFSSLLR*ALRKAL Trigger: CAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGA...AAACCCTAAGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCATTCATCTCTCCTGAGGTaGGCATTGCGCAAAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QLCQHLLISDFLSPKSCHSSLLR*ALRKAL Trigger: CAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGA...ATGGCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | TTCCAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCTGTCCAGGTCCACTTaGGACTTCCGATCATGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: FQLCQHLLISDFLSPKSCLSRST*DFRSWY Trigger: ATACCATGATCGGAAGTCCAAAGTGGACCTGGACAG...GCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS TCA 90 bp | AAAGTAGTCATCAGACTTAAATGTGATTTTAATCTGGTTTGTTCTTaGCGTTATCCTTGGAGGGATCTCCTTGTGGCCACACCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KVVIRLKCDFNLVCS*RYPWRDLLVATPSS Trigger: GGAAGATGGTGTGGCCACAAGGAGATCCCTCCAAGGATAACGTCAAGAACAAACCAGATTAAAATCACATTTAAGTCTGATGACTACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTCTCCTGAGGTTGGCATaGCGCAAAGCTTTGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TNKATFPYAFIALRLEASLLRLA*RKALMD Trigger: ATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAG...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAACTCCTGAGGTTGGCATaGCGCAAAGCTTTGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQLLRLA*RKALMD Trigger: ATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAG...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTCATCTCTCCTGAGGTaGGCATTGCGCAAAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TNKATFPYAFIALRLEASSSLLR*ALRKAL Trigger: CAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGA...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTGCTTTGCCCCTTCTCTaGAAATGTCCAGGCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: TNKATFPYAFIALRLEASALPLL*KCPGSN Trigger: GTTTGAGCCTGGACATTTCAAGAGAAGGGGCAAAGC...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR CAA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTATGGTCAAAGGACAGTaGTATCCGTGTTTTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TNKATFPYAFIALRLEASMVKGQ*YPCFLL Trigger: CAGGAGAAAACACGGATACAACTGTCCTTTGACCAT...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAAATGGTCAAAGGACAGTaGTATCCGTGTTTTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQMVKGQ*YPCFLL Trigger: CAGGAGAAAACACGGATACAACTGTCCTTTGACCAT...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | CAGTTATGTCAACATTTGCTTATTTCTGACTTTCTATCACCCAAGTCTTGCCATTGCCAAGACACTGGATaGAAGTGCTTAAGTAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: QLCQHLLISDFLSPKSCHCQDTG*KCLSRS Trigger: AGATCTACTTAAGCACTTCAATCCAGTGTCTTGGCA...ATGGCAAGACTTGGGTGATAGAAAGTCAGAAATAAGCAAATGTTGACATAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTTGCCAAGACACTGGATaGAAGTGCTTAAGTAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: TNKATFPYAFIALRLEASCQDTG*KCLSRS Trigger: AGATCTACTTAAGCACTTCAATCCAGTGTCTTGGCA...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAAAGTCTCATCTTTCATTTAATGGACAAGTGCCTTCTTTAAGTGAGCAAGCCATATTCTTAGCTTaGCCCCTTCTCTTGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: RRKSHLSFNGQVPSLSEQAIFLA*PLLLKC Trigger: ACATTTCAAGAGAAGGGGCAAAGCTAAGAATATGGC...TTGCTCACTTAAAGAAGGCACTTGTCCATTAAATGAAAGATGAGACTTTCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS-3UTR CAA 90 bp | ACTAACAAAGCAACATTTCCATATGCATTCATTGCACTGAGATTAGAAGCTTCTGCCATATTCTTAGCTTaGCCCCTTCTCTTGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: TNKATFPYAFIALRLEASAIFLA*PLLLKC Trigger: ACATTTCAAGAGAAGGGGCAAAGCTAAGAATATGGC...AGAAGCTTCTAATCTCAGTGCAATGAATGCATATGGAAATGTTGCTTTGTTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS CAA 72 bp | GTGCAGGACTTCCAGTTGACAGTTCCGCAACCACAGTaGCCACCACAGCGCTGCACGAGGAGGCATCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: VQDFQLTVPQPQ*PPQRCTRRHRG Trigger: CCCACGATGCCTCCTCGTGCAGCGCTGTGGTGGCAACTGTGGTTGCGGAACTGTCAACTGGAAGTCCTGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS CAA 90 bp | GAGCTGCATGTGCAGGACTTCCAGTTGACAGTTCCGCAACCACAGTaGCCACCACAGCGCTGCACGAGGAGGCATCGTGGGAAGAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: ELHVQDFQLTVPQPQ*PPQRCTRRHRGKKT Trigger: AGTCTTCTTCCCACGATGCCTCCTCGTGCAGCGCTGTGGTGGCAACTGTGGTTGCGGAACTGTCAACTGGAAGTCCTGCACATGCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS CCA 72 bp | ACAGTTGCCACCACAGCGCTGCACGAGGAGGCATCGTaGGAAGAAGACTGCATTGGTCAGCTTCAGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TVATTALHEEAS*EEDCIGQLQLL Trigger: GAGGAGCTGAAGCTGACCAATGCAGTCTTCTTCCCACGATGCCTCCTCGTGCAGCGCTGTGGTGGCAACTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS CAA 72 bp | CCTGGGAACGGAGCCACCATGTCAGAAGCAGGTTCCTaGGGTAGCTGTTCGGGAAGCGAGGACTCTGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: PGNGATMSEAGS*GSCSGSEDSAH Trigger: ATGTGCAGAGTCCTCGCTTCCCGAACAGCTACCCAAGGAACCTGCTTCTGACATGGTGGCTCCGTTCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CAA 90 bp | GTGTTTTCTCCTGGGAACGGAGCCACCATGTCAGAAGCAGGTTCCTaGGGTAGCTGTTCGGGAAGCGAGGACTCTGCACATGGCCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: VFSPGNGATMSEAGS*GSCSGSEDSAHGHC Trigger: GCAATGGCCATGTGCAGAGTCCTCGCTTCCCGAACAGCTACCCAAGGAACCTGCTTCTGACATGGTGGCTCCGTTCCCAGGAGAAAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS TCA 72 bp | GTCCAGGGCATCAGCAGTGAGAGTGGGGTCCGTTATTaGTGGAGAGTGATAGGACACCCCAGAGAAAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VQGISSESGVRY*WRVIGHPRERA Trigger: AGCTCTTTCTCTGGGGTGTCCTATCACTCTCCATCAATAACGGACCCCACTCTCACTGCTGATGCCCTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS GCA 72 bp | TCTCCTGAGGTTGGCATTGCGCAAAGCTTTGATGGATaGTCTCTGCGGAGTCGCAAAAGTGTCCGGATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPEVGIAQSFDG*SLRSRKSVRIA Trigger: TGCTATCCGGACACTTTTGCGACTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS GCA 72 bp | AGCTGTTCGGGAAGCGAGGACTCTGCACATGGCCATTaGTTGTCACCTGAATGTTCTCCTCTCTCTGGTACA | + |
|
Preference number: 6 (lower is better) Translates to: SCSGSEDSAHGH*LSPECSPLSGT Trigger: TGTACCAGAGAGAGGAGAACATTCAGGTGACAAGCAATGGCCATGTGCAGAGTCCTCGCTTCCCGAACAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CAA 72 bp | GACACCCCAGAGAAAGAGCTTGTGACTGATTCCCAGTaGGTCTCTGAGGCTGCTTCCGGTTGGAAATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DTPEKELVTDSQ*VSEAASGWKSS Trigger: GGAAGATTTCCAACCGGAAGCAGCCTCAGAGACCAACTGGGAATCAGTCACAAGCTCTTTCTCTGGGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CAA 72 bp | CTCTCATCTCTCCTGAGGTTGGCATTGCGCAAAGCTTaGATGGATGCTCTCTGCGGAGTCGCAAAAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSLLRLALRKA*MDALCGVAKVS Trigger: GGACACTTTTGCGACTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CAA 90 bp | TTGGGTAGCTGTTCGGGAAGCGAGGACTCTGCACATGGCCATTGCTaGTCACCTGAATGTTCTCCTCTCTCTGGTACAAGTCATCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LGSCSGSEDSAHGHC*SPECSPLSGTSHLS Trigger: GGAGAGATGACTTGTACCAGAGAGAGGAGAACATTCAGGTGACAAGCAATGGCCATGTGCAGAGTCCTCGCTTCCCGAACAGCTACCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS TCA 72 bp | AAGCGAGGACTCTGCACATGGCCATTGCTTGTCACCTaGATGTTCTCCTCTCTCTGGTACAAGTCTGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KRGLCTWPLLVT*MFSSLWYKSVR Trigger: CCTCACAGACTTGTACCAGAGAGAGGAGAACATTCAGGTGACAAGCAATGGCCATGTGCAGAGTCCTCGCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CAA 72 bp | AAGTCATCTCTCCTGAGGTTGGCATTGCGCAAAGCTTaGATGGATGCTCTCTGCGGAGTCGCAAAAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KSSLLRLALRKA*MDALCGVAKVS Trigger: GGACACTTTTGCGACTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS CAA 72 bp | TCTCTCTGGTACAAGTCATCTCTCCTGAGGTTGGCATaGCGCAAAGCTTTGATGGATGCTCTCTGCGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLWYKSSLLRLA*RKALMDALCGV Trigger: GACTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGACTTGTACCAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS CAA 72 bp | AGTAGATCTTCCACGGTATCGAATTCTGCGACAGTTTaGTCCAGGGCATCAGCAGTGAGAGTGGGGTCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: SRSSTVSNSATV*SRASAVRVGSV Trigger: AACGGACCCCACTCTCACTGCTGATGCCCTGGACAAAACTGTCGCAGAATTCGATACCGTGGAAGATCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CAA 90 bp | ATGTTCTCCTCTCTCTGGTACAAGTCATCTCTCCTGAGGTTGGCATaGCGCAAAGCTTTGATGGATGCTCTCTGCGGAGTCGCAAAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: MFSSLWYKSSLLRLA*RKALMDALCGVAKV Trigger: CACTTTTGCGACTCCGCAGAGAGCATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGACTTGTACCAGAGAGAGGAGAACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS TCA 72 bp | AAGCGAGGACTCTGCACATGGCCATTGCTTGTCACCTaGATGTTCTCCTCTCTCTGGTACAAGTCATCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KRGLCTWPLLVT*MFSSLWYKSSL Trigger: GAGAGATGACTTGTACCAGAGAGAGGAGAACATTCAGGTGACAAGCAATGGCCATGTGCAGAGTCCTCGCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS TCA 72 bp | TTGGAGGGATCTCCTTGTGGCCACACCATCTTCCTCTaGCAACAGTGCTGCTCTCTGAGACTTCTTCAACTT | + |
|
Preference number: 6 (lower is better) Translates to: LEGSPCGHTIFL*QQCCSLRLLQL Trigger: AAGTTGAAGAAGTCTCAGAGAGCAGCACTGTTGTCAGAGGAAGATGGTGTGGCCACAAGGAGATCCCTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CCA 72 bp | TTTGTTCTTGACGTTATCCTTGGAGGGATCTCCTTGTaGCCACACCATCTTCCTCTGACAACAGTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FVLDVILGGISL*PHHLPLTTVLL Trigger: GAGCAGCACTGTTGTCAGAGGAAGATGGTGTGGCCACAAGGAGATCCCTCCAAGGATAACGTCAAGAACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CAA 72 bp | TTCTCCTCTCTCTGGTACAAGTCATCTCTCCTGAGGTaGGCATTGCGCAAAGCTTTGATGGATGCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FSSLWYKSSLLR*ALRKALMDALC Trigger: GCAGAGAGCATCCATCAAAGCTTTGCGCAATGCCAACCTCAGGAGAGATGACTTGTACCAGAGAGAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058692.9 |
||
| CDS CAA 72 bp | TGGTTTGTTCTTGACGTTATCCTTGGAGGGATCTCCTaGTGGCCACACCATCTTCCTCTGACAACAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WFVLDVILGGIS*WPHHLPLTTVL Trigger: CAGCACTGTTGTCAGAGGAAGATGGTGTGGCCACAAGGAGATCCCTCCAAGGATAACGTCAAGAACAAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CAA 90 bp | AAGTGCTTAAGTAGATCTTCCACGGTATCGAATTCTGCGACAGTTTaGTCCAGGGCATCAGCAGTGAGAGTGGGGTCCGTTATTGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: KCLSRSSTVSNSATV*SRASAVRVGSVIDG Trigger: TCCATCAATAACGGACCCCACTCTCACTGCTGATGCCCTGGACAAAACTGTCGCAGAATTCGATACCGTGGAAGATCTACTTAAGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS CAA 90 bp | ATTTTAATCTGGTTTGTTCTTGACGTTATCCTTGGAGGGATCTCCTaGTGGCCACACCATCTTCCTCTGACAACAGTGCTGCTCTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ILIWFVLDVILGGIS*WPHHLPLTTVLLSE Trigger: CTCAGAGAGCAGCACTGTTGTCAGAGGAAGATGGTGTGGCCACAAGGAGATCCCTCCAAGGATAACGTCAAGAACAAACCAGATTAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS TCA 72 bp | CTTCAATACCTCATGATACTTCTTCACTGTCTTCCCTaGGCTGCATGTGCAGGACTTCCAGTTGACAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQYLMILLHCLP*AACAGLPVDSS Trigger: GGAACTGTCAACTGGAAGTCCTGCACATGCAGCTCAGGGAAGACAGTGAAGAAGTATCATGAGGTATTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS GCA 72 bp | CCAGGTCCACTTTGGACTTCCGATCATGGTATGACCTaGCTCTATAATGAGGGGTGTCCAGATACAAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGPLWTSDHGMT*LYNEGCPDTNS Trigger: AGAATTTGTATCTGGACACCCCTCATTATAGAGGCAGGTCATACCATGATCGGAAGTCCAAAGTGGACCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 |
||
| CDS GCA 72 bp | CTTCAATACCTTTGGACTTCCGATCATGGTATGACCTaGCTCTATAATGAGGGGTGTCCAGATACAAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQYLWTSDHGMT*LYNEGCPDTNS Trigger: AGAATTTGTATCTGGACACCCCTCATTATAGAGGCAGGTCATACCATGATCGGAAGTCCAAAGGTATTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214892.2 |
||
| CDS TCA 72 bp | CTACAAATGTCATTTTCTGCTTCCTCTAGTCCGAATTaGTGGTCAAAGGACAGTTGTATCCGTGTTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQMSFSASSSPN*WSKDSCIRVFS Trigger: GGAGAAAACACGGATACAACTGTCCTTTGACCATCAATTCGGACTAGAGGAAGCAGAAAATGACATTTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||
| CDS TCA 72 bp | ATCAGACTTAAATGTGATTTTAATCTGGTTTGTTCTTaGCGTTATCCTTGGAGGGATCTCCTTGTGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: IRLKCDFNLVCS*RYPWRDLLVAT Trigger: TGTGGCCACAAGGAGATCCCTCCAAGGATAACGTCAAGAACAAACCAGATTAAAATCACATTTAAGTCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000058692.9 ENSMUST00000168039.8 ENSMUST00000214892.2 |
||