Pregenerated sensors for PDGFC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028019Ensembl transcript IDs: ENSMUST00000029652.4, ENSMUST00000129285.8, ENSMUST00000143721.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAACGCTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATaGCAGTGCTCACGTGTGCTGCTACGAAGGCTGCAGTTACCCTCC | + |
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Preference number: 1 (lower is better) Translates to: ANAGGDEGCLWGYTE*QCSRVLLRRLQLPS Trigger: GGAGGGTAACTGCAGCCTTCGTAGCAGCACACGTGAGCACTGGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAGCGTTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR GCA 90 bp | GCTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCAGTaGTCACGTGTGCTGCTACGAAGGCTGCAGTTACCCTCCTGCGTT | + |
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Preference number: 1 (lower is better) Translates to: AGGDEGCLWGYTECQ*SRVLLRRLQLPSCV Trigger: AACGCAGGAGGGTAACTGCAGCCTTCGTAGCAGCACACGTGAGCACTGGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR GCA 90 bp | TGCCAGTGCTCACGTGTGCTGCTACGAAGGCTGCAGTTACCCTCCTaGGTTTCCTCTACACACACAGTCACATTCCTCGTGGTGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: CQCSRVLLRRLQLPS*VSSTHTVTFLVVFQ Trigger: CTGGAACACCACGAGGAATGTGACTGTGTGTGTAGAGGAAACGCAGGAGGGTAACTGCAGCCTTCGTAGCAGCACACGTGAGCACTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR GCA 90 bp | GGGGGTACACAGAATGCCAGTGCTCACGTGTGCTGCTACGAAGGCTaGAGTTACCCTCCTGCGTTTCCTCTACACACACAGTCACATTCC | + |
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Preference number: 1 (lower is better) Translates to: GGTQNASAHVCCYEG*SYPPAFPLHTQSHS Trigger: GGAATGTGACTGTGTGTGTAGAGGAAACGCAGGAGGGTAACTGCAGCCTTCGTAGCAGCACACGTGAGCACTGGCATTCTGTGTACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR GCA 90 bp | TGGGCTTCCTCTAGAAGGCAGTGCTTTGTGATTGACTCCTCTTGGTaGCTCTGGTCTTTTAGAAGACACTTGAAGTCCTGCAGGGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: WASSRRQCFVIDSSW*LWSFRRHLKSCRGR Trigger: CCTTCCCCTGCAGGACTTCAAGTGTCTTCTAAAAGACCAGAGGCACCAAGAGGAGTCAATCACAAAGCACTGCCTTCTAGAGGAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR CCA 90 bp | CGCAGCATAGCCCAGAACACTGTGCCTAGAAATGGTCGAGGTTTCTaGGGACGTGCTTCTCTGAGCTATACTCCTATTTCCCATAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: RSIAQNTVPRNGRGF*GRASLSYTPISHRK Trigger: CTTTCTATGGGAAATAGGAGTATAGCTCAGAGAAGCACGTCCCCAGAAACCTCGACCATTTCTAGGCACAGTGTTCTGGGCTATGCTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR CCA 90 bp | AGTTACCCTCCTGCGTTTCCTCTACACACACAGTCACATTCCTCGTaGTGTTCCAGAGCCACATCAGTGAGTGACTTATGCAATCCCTTG | + |
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Preference number: 1 (lower is better) Translates to: SYPPAFPLHTQSHSS*CSRATSVSDLCNPL Trigger: CAAGGGATTGCATAAGTCACTCACTGATGTGGCTCTGGAACACCACGAGGAATGTGACTGTGTGTGTAGAGGAAACGCAGGAGGGTAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR CCA 90 bp | TCCTCTAGAAGGCAGTGCTTTGTGATTGACTCCTCTTGGTGCCTCTaGTCTTTTAGAAGACACTTGAAGTCCTGCAGGGGAAGGCTATTG | + |
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Preference number: 1 (lower is better) Translates to: SSRRQCFVIDSSWCL*SFRRHLKSCRGRLL Trigger: CAATAGCCTTCCCCTGCAGGACTTCAAGTGTCTTCTAAAAGACCAGAGGCACCAAGAGGAGTCAATCACAAAGCACTGCCTTCTAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR CCA 90 bp | AACCTGGCCAGAATATGGTATCTGTCCTCTTTAGCTCTTCCCGTATaGACACTGAGAAGTTCCGGGGTGTGCAGCTGTAGAGTTTTACCT | + |
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Preference number: 1 (lower is better) Translates to: NLARIWYLSSLALPV*TLRSSGVCSCRVLP Trigger: AGGTAAAACTCTACAGCTGCACACCCCGGAACTTCTCAGTGTCCATACGGGAAGAGCTAAAGAGGACAGATACCATATTCTGGCCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| 3UTR TCA 90 bp | CACACAGTCACATTCCTCGTGGTGTTCCAGAGCCACATCAGTGAGTaGCTTATGCAATCCCTTGACTCCAGTTTTTGGTCTCAACTGAAG | + |
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Preference number: 1 (lower is better) Translates to: HTVTFLVVFQSHISE*LMQSLDSSFWSQLK Trigger: CTTCAGTTGAGACCAAAAACTGGAGTCAAGGGATTGCATAAGTCACTCACTGATGTGGCTCTGGAACACCACGAGGAATGTGACTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR GCA 90 bp | TTCTGTGGTCAGAAGACCATTGTCTGGGCTTCCTCTAGAAGGCAGTaGTTTGTGATTGACTCCTCTTGGTGCCTCTGGTCTTTTAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: FCGQKTIVWASSRRQ*FVIDSSWCLWSFRR Trigger: TCTTCTAAAAGACCAGAGGCACCAAGAGGAGTCAATCACAAAGCACTGCCTTCTAGAGGAAGCCCAGACAATGGTCTTCTGACCACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR TCA 90 bp | ACTGCAACTAATCTCCACACCAGCACCATATTTCTTGGGTATGTATaGGGAAACTTCGGGCTGTGGATGCTCCCATTACCAGATATAGTG | + |
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Preference number: 1 (lower is better) Translates to: TATNLHTSTIFLGYV*GNFGLWMLPLPDIV Trigger: CACTATATCTGGTAATGGGAGCATCCACAGCCCGAAGTTTCCTCATACATACCCAAGAAATATGGTGCTGGTGTGGAGATTAGTTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| 3UTR GCA 90 bp | CATCTGTCTATCTATGCAAACAGGTTGGAGAAATCCAAGTATTTCTaGATTGTTCACAATCAAGTGTGTGTTTTTCACCATTTTCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: HLSIYANRLEKSKYF*IVHNQVCVFHHFLV Trigger: CACAAGAAAATGGTGAAAAACACACACTTGATTGTGAACAATGCAGAAATACTTGGATTTCTCCAACCTGTTTGCATAGATAGACAGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCGGCCAACGCTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCGGTGGGGATGAAGGTTaGTTGTGGGGGTACACAGAA | + |
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Preference number: 2 (lower is better) Translates to: LRPTLVGMKVACGGTQNAGGDEG*LWGYTE Trigger: TTCTGTGTACCCCCACAAGCAACCTTCATCCCCACC...GGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAGCGTTGGCCGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCGGCCAACGCTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCCAGAAGACCATTGTCTaGGCTTCCTCTAGAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LRPTLVGMKVACGGTQNAQKTIV*ASSRRQ Trigger: CTGCCTTCTAGAGGAAGCCCAGACAATGGTCTTCTG...GGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAGCGTTGGCCGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCGGCCAACGCTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCAGCCACATCAGTGAGTaGCTTATGCAATCCCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: LRPTLVGMKVACGGTQNASHISE*LMQSLD Trigger: GTCAAGGGATTGCATAAGTCACTCACTGATGTGGCT...GGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAGCGTTGGCCGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGGAAGGGAAGGCCACTCCTCTGTGCAGGTGTGCTTTCTCCAAACCATGACCAAGGCCACTCCTCTGTaGAGGTGTGCTTTCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: KGREGHSSVQVCFLQTMTKATPL*RCAFSK Trigger: TTTGGAGAAAGCACACCTGCACAGAGGAGTGGCCTT...GGTCATGGTTTGGAGAAAGCACACCTGCACAGAGGAGTGGCCTTCCCTTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAAGGGAAGGCCACTCCTCTGTGCAGGTGTGCTTTCTCCAAACCATGACCGGAAACTTCGGGCTGTaGATGCTCCCATTACCAGAT | + |
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Preference number: 2 (lower is better) Translates to: KGREGHSSVQVCFLQTMTGNFGL*MLPLPD Trigger: ATCTGGTAATGGGAGCATCCACAGCCCGAAGTTTCC...GGTCATGGTTTGGAGAAAGCACACCTGCACAGAGGAGTGGCCTTCCCTTCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCGGCCAACGCTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCAACCTGGCCAGAATATaGTATCTGTCCTCTTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: LRPTLVGMKVACGGTQNANLARI*YLSSLA Trigger: AGCTAAAGAGGACAGATACCATATTCTGGCCAGGTT...GGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAGCGTTGGCCGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGGAAGGGAAGGCCACTCCTCTGTGCAGGTGTGCTTTCTCCAAACCATGACCACCTTTCCTCCAAATTaGGGAGAAGTTGCCAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: KGREGHSSVQVCFLQTMTTFPPN*GEVAKH Trigger: ATGCTTGGCAACTTCTCCGCAATTTGGAGGAAAGGT...GGTCATGGTTTGGAGAAAGCACACCTGCACAGAGGAGTGGCCTTCCCTTCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR CAA 90 bp | TACCGAATCAGCTCTTCCAAGGTACTGAAGGCAGTCACAGCATTGTaGAGCAGGTCCAATGACAAAGATGAAGGGGGCAACACCGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: YRISSSKVLKAVTAL*SRSNDKDEGGNTEG Trigger: TCCTTCGGTGTTGCCCCCTTCATCTTTGTCATTGGACCTGCTCAACAATGCTGTGACTGCCTTCAGTACCTTGGAAGAGCTGATTCGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| 3UTR CAA 90 bp | AGGTACCGAATCAGCTCTTCCAAGGTACTGAAGGCAGTCACAGCATaGTTGAGCAGGTCCAATGACAAAGATGAAGGGGGCAACACCGAA | + |
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Preference number: 2 (lower is better) Translates to: RYRISSSKVLKAVTA*LSRSNDKDEGGNTE Trigger: TTCGGTGTTGCCCCCTTCATCTTTGTCATTGGACCTGCTCAACAATGCTGTGACTGCCTTCAGTACCTTGGAAGAGCTGATTCGGTACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCAGCTCGAGAGTATCACACTGCTCTTGCTCAGTGCAAGTTCACCCCTTCCAGTCACAGCATTGTTaGGCAGGTCCAATGACAAAG | + |
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Preference number: 2 (lower is better) Translates to: SVSSRVSHCSCSVQVHPFQSQHC*AGPMTK Trigger: CTTTGTCATTGGACCTGCTCAACAATGCTGTGACTG...GAAGGGGTGAACTTGCACTGAGCAAGAGCAGTGTGATACTCTCGAGCTGACTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGTGCCTCTGGTCTTTTAGAAGACACTTGAAGTCCTGCAGGGGAAGGCTATACACAGAATGCCAGTaGTCACGTGTGCTGCTACGA | + |
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Preference number: 2 (lower is better) Translates to: SWCLWSFRRHLKSCRGRLYTECQ*SRVLLR Trigger: TCGTAGCAGCACACGTGAGCACTGGCATTCTGTGTA...TAGCCTTCCCCTGCAGGACTTCAAGTGTCTTCTAAAAGACCAGAGGCACCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR TCA 90 bp | CAATCCCTTGACTCCAGTTTTTGGTCTCAACTGAAGGACCTCATGGTACTTTTTCAACGCTGGTGGGGATaGAGGTTGCTTGTGGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: QSLDSSFWSQLKDLMVLFQRWWG*RLLVGV Trigger: TACCCCCACAAGCAACCTTCATCCCCACCAGCGTTG...AAAAAGTACCATGAGGTCCTTCAGTTGAGACCAAAAACTGGAGTCAAGGGATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGGAAGGGAAGGCCACTCCTCTGTGCAGGTGTGCTTTCTCCAAACCATGACCAAATTGCGGAGAAGTTaGCAAGCATTGAAAACTTCA | + |
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Preference number: 2 (lower is better) Translates to: KGREGHSSVQVCFLQTMTKLRRS*QALKTS Trigger: TGAAGTTTTCAATGCTTGGCAACTTCTCCGCAATTT...GGTCATGGTTTGGAGAAAGCACACCTGCACAGAGGAGTGGCCTTCCCTTCCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGAAGGGAAGGCCACTCCTCTGTGCAGGTGTGCTTTCTCCAAACCATGACCTTTCATTTGTTTCTGTaGTCAGAAGACCATTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: KGREGHSSVQVCFLQTMTFHLFL*SEDHCL Trigger: CAGACAATGGTCTTCTGACCACAGAAACAAATGAAA...GGTCATGGTTTGGAGAAAGCACACCTGCACAGAGGAGTGGCCTTCCCTTCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR TCA 90 bp | CCATATTTACTCAAGCTCTGTTCTGTTCGTAGCTCTAAGAACAGAATTGGGAATCAACGCTGGTGGGGATaGAGGTTGCTTGTGGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: PYLLKLCSVRSSKNRIGNQRWWG*RLLVGV Trigger: TACCCCCACAAGCAACCTTCATCCCCACCAGCGTTG...ATTCCCAATTCTGTTCTTAGAGCTACGAACAGAACAGAGCTTGAGTAAATATGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCACCTGCCATCGATCTGGCTCTAGGTACCGAATCAGCTCTTCCAAGGTAGAATCCGGGTTCAGATaGAAAATACTCATCAGATAC | + |
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Preference number: 2 (lower is better) Translates to: KSTCHRSGSRYRISSSKVESGFR*KILIRY Trigger: GTATCTGATGAGTATTTTCCATCTGAACCCGGATTC...TACCTTGGAAGAGCTGATTCGGTACCTAGAGCCAGATCGATGGCAGGTGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| 3UTR CAA 90 bp | TTTCTCCAAACCATGACCGCACCTTTCCTCCAAATTGCGGAGAAGTaGCCAAGCATTGAAAACTTCAGTCTTTCCTTTCAGCATGGCACA | + |
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Preference number: 2 (lower is better) Translates to: FLQTMTAPFLQIAEK*PSIENFSLSFQHGT Trigger: TGTGCCATGCTGAAAGGAAAGACTGAAGTTTTCAATGCTTGGCAACTTCTCCGCAATTTGGAGGAAAGGTGCGGTCATGGTTTGGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTTTCTGTGGTCAGAAGACCATTGTCTGGGCTTCCTCTAGAAGGCAGTGCTACCATTTTCTTGTGCTaGCATCACTTGCCCATATCA | + |
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Preference number: 2 (lower is better) Translates to: FVSVVRRPLSGLPLEGSATIFLC*HHLPIS Trigger: TGATATGGGCAAGTGATGTCAGCACAAGAAAATGGT...AGCACTGCCTTCTAGAGGAAGCCCAGACAATGGTCTTCTGACCACAGAAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCAGAATATGGTATCTGTCCTCTTTAGCTCTTCCCGTATGGACACTGAGAAGACCATTTTCTTGTGCTaGCATCACTTGCCCATATCA | + |
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Preference number: 2 (lower is better) Translates to: GQNMVSVLFSSSRMDTEKTIFLC*HHLPIS Trigger: TGATATGGGCAAGTGATGTCAGCACAAGAAAATGGT...CTTCTCAGTGTCCATACGGGAAGAGCTAAAGAGGACAGATACCATATTCTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCTCTAAAAGCTTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCTGGGGGTACACAGAATaGCAGTGCTCACGTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LLSKSFEFVENRASVYLCWGYTE*QCSRVL Trigger: CAGCACACGTGAGCACTGGCATTCTGTGTACCCCCA...GCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAAGCTTTTAGAGAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCATAGAAAGGGGTAGGTTAGCAATGGCTCCATATTTACTCAAGCTCTGTCTGCAGTTACCCTCCTaGGTTTCCTCTACACACACA | + |
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Preference number: 2 (lower is better) Translates to: FPIERGRLAMAPYLLKLCLQLPS*VSSTHT Trigger: TGTGTGTGTAGAGGAAACGCAGGAGGGTAACTGCAG...ACAGAGCTTGAGTAAATATGGAGCCATTGCTAACCTACCCCTTTCTATGGGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCTCGAGAGTATCACACTGCTCTTGCTCAGTGCAAGTTCACCCCTTCACTGCAGCACCATATTTCTTaGGTATGTATGAGGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: SAREYHTALAQCKFTPSLQHHIS*VCMRKL Trigger: AAGTTTCCTCATACATACCCAAGAAATATGGTGCTG...CAGTGAAGGGGTGAACTTGCACTGAGCAAGAGCAGTGTGATACTCTCGAGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
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| 3UTR-3UTR CCA 90 bp | AATGACAAAGATGAAGGGGGCAACACCGAAGGACTCGTGGTTTCTGTGACTTGTAAACACTTCCATCACTaGGCTCCTCAACTTCTACAA | + |
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Preference number: 2 (lower is better) Translates to: NDKDEGGNTEGLVVSVTCKHFHH*APQLLQ Trigger: TTGTAGAAGTTGAGGAGCCCAGTGATGGAAGTGTTT...ACAAGTCACAGAAACCACGAGTCCTTCGGTGTTGCCCCCTTCATCTTTGTCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| 3UTR-3UTR CCA 90 bp | CAATCCCTTGACTCCAGTTTTTGGTCTCAACTGAAGGACCTCATGGTACTTTTTTTAGCTCTTCCCGTATaGACACTGAGAAGTTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: QSLDSSFWSQLKDLMVLFLALPV*TLRSSG Trigger: CCCGGAACTTCTCAGTGTCCATACGGGAAGAGCTAA...AAAAAGTACCATGAGGTCCTTCAGTTGAGACCAAAAACTGGAGTCAAGGGATTG 46% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR CAA 90 bp | CATTTTCATCTACTGCAACTAATCTCCACACCAGCACCATATTTCTaGGGTATGTATGAGGAAACTTCGGGCTGTGGATGCTCCCATTAC | + |
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Preference number: 2 (lower is better) Translates to: HFHLLQLISTPAPYF*GMYEETSGCGCSHY Trigger: GTAATGGGAGCATCCACAGCCCGAAGTTTCCTCATACATACCCAAGAAATATGGTGCTGGTGTGGAGATTAGTTGCAGTAGATGAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTACAAAATCATACTTGCATATATCGTCTTCTGGATCTTCCAGCCCAAATCTTGGGGGTACACAGAATaGCAGTGCTCACGTGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: FYKIILAYIVFWIFQPKSWGYTE*QCSRVL Trigger: CAGCACACGTGAGCACTGGCATTCTGTGTACCCCCA...AGATTTGGGCTGGAAGATCCAGAAGACGATATATGCAAGTATGATTTTGTAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCCCATAGAAAGGGGTAGGTTAGCAATGGCTCCATATTTACTCAAGCTCTGTAGAAGTTCCGGGGTGTaGAGCTGTAGAGTTTTACCT | + |
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Preference number: 2 (lower is better) Translates to: FPIERGRLAMAPYLLKLCRSSGV*SCRVLP Trigger: AGGTAAAACTCTACAGCTGCACACCCCGGAACTTCT...ACAGAGCTTGAGTAAATATGGAGCCATTGCTAACCTACCCCTTTCTATGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTATGAAAGTGGAAAAAGCAACAAGCCTCTGTCAGTCAGCTCGAGAGTATCAAGAAGTTCCGGGGTGTaGAGCTGTAGAGTTTTACCT | + |
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Preference number: 2 (lower is better) Translates to: KYESGKSNKPLSVSSRVSRSSGV*SCRVLP Trigger: AGGTAAAACTCTACAGCTGCACACCCCGGAACTTCT...TGATACTCTCGAGCTGACTGACAGAGGCTTGTTGCTTTTTCCACTTTCATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCATAGAAAGGGGTAGGTTAGCAATGGCTCCATATTTACTCAAGCTCTGTCAAAAGCTGCCATGTTaGCTTGTAGAGGCTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: FPIERGRLAMAPYLLKLCQKLPC*LVEAVQ Trigger: TTGGACAGCCTCTACAAGCCAACATGGCAGCTTTTG...ACAGAGCTTGAGTAAATATGGAGCCATTGCTAACCTACCCCTTTCTATGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTATGAAAGTGGAAAAAGCAACAAGCCTCTGTCAGTCAGCTCGAGAGTATCACAAAAGCTGCCATGTTaGCTTGTAGAGGCTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: KYESGKSNKPLSVSSRVSQKLPC*LVEAVQ Trigger: TTGGACAGCCTCTACAAGCCAACATGGCAGCTTTTG...TGATACTCTCGAGCTGACTGACAGAGGCTTGTTGCTTTTTCCACTTTCATACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
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| 3UTR-3UTR CCA 90 bp | GGTTTCTGGGGACGTGCTTCTCTGAGCTATACTCCTATTTCCCATAGAAAGGGGTCTATGCAAACAGGTTaGAGAAATCCAAGTATTTCT | + |
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Preference number: 2 (lower is better) Translates to: GFWGRASLSYTPISHRKGSMQTG*RNPSIS Trigger: AGAAATACTTGGATTTCTCCAACCTGTTTGCATAGA...CCCCTTTCTATGGGAAATAGGAGTATAGCTCAGAGAAGCACGTCCCCAGAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTACTCAAGCTCTGTTCTGTTCGTAGCTCTAAGAACAGAATTGGGAATTGATTACACAGAATGCCAGTaGTCACGTGTGCTGCTACGA | + |
|
Preference number: 2 (lower is better) Translates to: IYSSSVLFVALRTELGIDYTECQ*SRVLLR Trigger: TCGTAGCAGCACACGTGAGCACTGGCATTCTGTGTA...ATCAATTCCCAATTCTGTTCTTAGAGCTACGAACAGAACAGAGCTTGAGTAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCCATAGAAAGGGGTAGGTTAGCAATGGCTCCATATTTACTCAAGCTCTGTATTGACTCCTCTTGGTaGCTCTGGTCTTTTAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: FPIERGRLAMAPYLLKLCIDSSW*LWSFRR Trigger: TCTTCTAAAAGACCAGAGGCACCAAGAGGAGTCAAT...ACAGAGCTTGAGTAAATATGGAGCCATTGCTAACCTACCCCTTTCTATGGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCTCTACAGTTTCTCTACTCAGCAGCAAAGGAATACAGTATAAGAAGTGTAGTGTATCACACTGCTCTTaGTCAGTGCAAGTTCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: ISTVSLLSSKGIQYKKCSVSHCS*SVQVHP Trigger: GGGGTGAACTTGCACTGAGCAAGAGCAGTGTGATAC...ACTACACTTCTTATACTGTATTCCTTTGCTGCTGAGTAGAGAAACTGTAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCAAACAGGTTGGAGAAGATGAAGGTTGCTTGTaGGGGTACACAGAATGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: FEFVENRASVYLCKQVGEDEGCL*GYTECQ Trigger: CTGGCATTCTGTGTACCCCCACAAGCAACCTTCATC...TTCTCCAACCTGTTTGCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCTACAGTTTCTCTACTCAGCAGCAAAGGAATACAGTATAAGAAGTGTAGTGGAAACTTCGGGCTGTaGATGCTCCCATTACCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: ISTVSLLSSKGIQYKKCSGNFGL*MLPLPD Trigger: ATCTGGTAATGGGAGCATCCACAGCCCGAAGTTTCC...ACTACACTTCTTATACTGTATTCCTTTGCTGCTGAGTAGAGAAACTGTAGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR CAA 90 bp | CTACACCATTCTGTCAGTGGAAAAGAAATGCTGTCACTCCAGAGTTaGCTAGCGATCTACATTCATTTCATTTGTTTCTGTGGTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LHHSVSGKEMLSLQS*LAIYIHFICFCGQK Trigger: CTTCTGACCACAGAAACAAATGAAATGAATGTAGATCGCTAGCAAACTCTGGAGTGACAGCATTTCTTTTCCACTGACAGAATGGTGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR GCA 90 bp | CACCACAAAACTTGGGCACAGATTAAGCATTTACAAGCAATGTATTATGTTGATAAGGCCACTCCTCTGTaGAGGTGTGCTTTCTCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: HHKTWAQIKHLQAMYYVDKATPL*RCAFSK Trigger: TTTGGAGAAAGCACACCTGCACAGAGGAGTGGCCTT...ATCAACATAATACATTGCTTGTAAATGCTTAATCTGTGCCCAAGTTTTGTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATATTTACTCAAGCTCTGTTCTGTTCGTAGCTCTAAGAACAGAATTGGGAATTTTCCTTTAGAAGTCTaGTTTCCTGGCACAGTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: PYLLKLCSVRSSKNRIGNFPLEV*FPGTVP Trigger: TGGGACTGTGCCAGGAAAGCAGACTTCTAAAGGAAA...ATTCCCAATTCTGTTCTTAGAGCTACGAACAGAACAGAGCTTGAGTAAATATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTCTCTAAAAGCTTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCGTGATTGACTCCTCTTaGTGCCTCTGGTCTTTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LLSKSFEFVENRASVYLCVIDSS*CLWSFR Trigger: TCTAAAAGACCAGAGGCACCAAGAGGAGTCAATCAC...GCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAAGCTTTTAGAGAGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR CCA 90 bp | CACCACAAAACTTGGGCACAGATTAAGCATTTACAAGCAATGTATTATGTTGATCAGAAGACCATTGTCTaGGCTTCCTCTAGAAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: HHKTWAQIKHLQAMYYVDQKTIV*ASSRRQ Trigger: CTGCCTTCTAGAGGAAGCCCAGACAATGGTCTTCTG...ATCAACATAATACATTGCTTGTAAATGCTTAATCTGTGCCCAAGTTTTGTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAATGGATCATATCATTCTCATTATCGCTCCTTCTTTCTGTCCTCCATTTTGCATATATCGTCTTCTaGATCTTCCAGCCCAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: GQWIISFSLSLLLSVLHFAYIVF*IFQPKS Trigger: AGATTTGGGCTGGAAGATCCAGAAGACGATATATGC...AAAATGGAGGACAGAAAGAAGGAGCGATAATGAGAATGATATGATCCATTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTTACTCAAGCTCTGTTCTGTTCGTAGCTCTAAGAACAGAATTGGGAATTGATTCCTCTAGAAGGCAGTaGTTTGTGATTGACTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: IYSSSVLFVALRTELGIDSSRRQ*FVIDSS Trigger: AGAGGAGTCAATCACAAAGCACTGCCTTCTAGAGGA...ATCAATTCCCAATTCTGTTCTTAGAGCTACGAACAGAACAGAGCTTGAGTAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAATGGATCATATCATTCTCATTATCGCTCCTTCTTTCTGTCCTCCATTTTCCTCATAAAAGACCATaGACAAAGGAAAACAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GQWIISFSLSLLLSVLHFPHKRP*TKENSE Trigger: CTCACTGTTTTCCTTTGTGCATGGTCTTTTATGAGG...AAAATGGAGGACAGAAAGAAGGAGCGATAATGAGAATGATATGATCCATTGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR-3UTR CCA 90 bp | ACTTCAGTCTTTCCTTTCAGCATGGCACATTTAATTCCTATTAACATAGCTGCTGCATATATCGTCTTCTaGATCTTCCAGCCCAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: TSVFPFSMAHLIPINIAAAYIVF*IFQPKS Trigger: AGATTTGGGCTGGAAGATCCAGAAGACGATATATGC...AGCAGCTATGTTAATAGGAATTAAATGTGCCATGCTGAAAGGAAAGACTGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCTACAGTTTCTCTACTCAGCAGCAAAGGAATACAGTATAAGAAGTGTAGTAACCTGGCCAGAATATaGTATCTGTCCTCTTTAGCT | + |
|
Preference number: 2 (lower is better) Translates to: ISTVSLLSSKGIQYKKCSNLARI*YLSSLA Trigger: AGCTAAAGAGGACAGATACCATATTCTGGCCAGGTT...ACTACACTTCTTATACTGTATTCCTTTGCTGCTGAGTAGAGAAACTGTAGAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR-3UTR TCA 90 bp | CAATGCACATTCTACATTTTCAATGTTTGTGCCTTAAATGAAAGGCCCTTAAGAGTTTTACCTCTTCCTTaGGGAGATTCAGATTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: QCTFYIFNVCALNERPLRVLPLP*GDSDSP Trigger: TGGTGAATCTGAATCTCCTCAAGGAAGAGGTAAAAC...TCTTAAGGGCCTTTCATTTAAGGCACAAACATTGAAAATGTAGAATGTGCATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR-3UTR CCA 90 bp | CCATATTTACTCAAGCTCTGTTCTGTTCGTAGCTCTAAGAACAGAATTGGGAATTCTATGCAAACAGGTTaGAGAAATCCAAGTATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PYLLKLCSVRSSKNRIGNSMQTG*RNPSIS Trigger: AGAAATACTTGGATTTCTCCAACCTGTTTGCATAGA...ATTCCCAATTCTGTTCTTAGAGCTACGAACAGAACAGAGCTTGAGTAAATATGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAATTCTAGTGAAGAGGTGGGTATTGTTTCTTTTAAACTCTACTGAAGGTTGTAGATGCAACTGGAAATaGAAATTTGCTTGTGGATAC | + |
|
Preference number: 2 (lower is better) Translates to: EILVKRWVLFLLNSTEGCRCNWK*KFACGY Trigger: GTATCCACAAGCAAATTTTCATTTCCAGTTGCATCT...ACAACCTTCAGTAGAGTTTAAAAGAAACAATACCCACCTCTTCACTAGAATTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCTACAGTTTCTCTACTCAGCAGCAAAGGAATACAGTATAAGAAGTGTAGTTTTTGTAACTTTACGTaGGACACACTGACATTCATT | + |
|
Preference number: 2 (lower is better) Translates to: ISTVSLLSSKGIQYKKCSFCNFT*DTLTFI Trigger: AATGAATGTCAGTGTGTCCCACGTAAAGTTACAAAA...ACTACACTTCTTATACTGTATTCCTTTGCTGCTGAGTAGAGAAACTGTAGAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR CCA 72 bp | CCTGCGGCCAACGCTGGTGGGGATGAAGGTTGCTTGTaGGGGTACACAGAATGCCAGTGCTCACGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PAANAGGDEGCL*GYTECQCSRVL Trigger: CAGCACACGTGAGCACTGGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAGCGTTGGCCGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR GCA 72 bp | GGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATaGCAGTGCTCACGTGTGCTGCTACGAAGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGDEGCLWGYTE*QCSRVLLRRLQ Trigger: CTGCAGCCTTCGTAGCAGCACACGTGAGCACTGGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR CCA 72 bp | CCCATACAGGAAAGCCTTGCCCAAAAGCTGCCATGTTaGCTTGTAGAGGCTGTCCAAGTCCACCTGCCATCG | + |
|
Preference number: 3 (lower is better) Translates to: PIQESLAQKLPC*LVEAVQVHLPS Trigger: CGATGGCAGGTGGACTTGGACAGCCTCTACAAGCCAACATGGCAGCTTTTGGGCAAGGCTTTCCTGTATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| 3UTR GCA 72 bp | TCACGTGTGCTGCTACGAAGGCTGCAGTTACCCTCCTaGGTTTCCTCTACACACACAGTCACATTCCTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SRVLLRRLQLPS*VSSTHTVTFLV Trigger: CACGAGGAATGTGACTGTGTGTGTAGAGGAAACGCAGGAGGGTAACTGCAGCCTTCGTAGCAGCACACGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| 3UTR GCA 72 bp | CAGAAGACCATTGTCTGGGCTTCCTCTAGAAGGCAGTaGTTTGTGATTGACTCCTCTTGGTGCCTCTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: QKTIVWASSRRQ*FVIDSSWCLWS Trigger: AGACCAGAGGCACCAAGAGGAGTCAATCACAAAGCACTGCCTTCTAGAGGAAGCCCAGACAATGGTCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR CCA 72 bp | GCCCAGAACACTGTGCCTAGAAATGGTCGAGGTTTCTaGGGACGTGCTTCTCTGAGCTATACTCCTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: AQNTVPRNGRGF*GRASLSYTPIS Trigger: GGAAATAGGAGTATAGCTCAGAGAAGCACGTCCCCAGAAACCTCGACCATTTCTAGGCACAGTGTTCTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR CCA 72 bp | CCTGCGTTTCCTCTACACACACAGTCACATTCCTCGTaGTGTTCCAGAGCCACATCAGTGAGTGACTTATGC | + |
|
Preference number: 3 (lower is better) Translates to: PAFPLHTQSHSS*CSRATSVSDLC Trigger: GCATAAGTCACTCACTGATGTGGCTCTGGAACACCACGAGGAATGTGACTGTGTGTGTAGAGGAAACGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCGTTTCCTCTACACACACAGTCACATTCCTCGTGGTGTTCCAGAGCCACATCTGCAGGGGAAGGCTATaGAAGCAAACAACTGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: CVSSTHTVTFLVVFQSHICRGRL*KQTTEN Trigger: ATTCTCAGTTGTTTGCTTCAATAGCCTTCCCCTGCA...GATGTGGCTCTGGAACACCACGAGGAATGTGACTGTGTGTGTAGAGGAAACGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTCTGGGGACGTGCTTCTCTGAGCTATACTCCTATTTCCCATAGAAAGGGGTCTTTTAGAAGACACTaGAAGTCCTGCAGGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GFWGRASLSYTPISHRKGSFRRH*KSCRGR Trigger: CCTTCCCCTGCAGGACTTCAAGTGTCTTCTAAAAGA...CCCCTTTCTATGGGAAATAGGAGTATAGCTCAGAGAAGCACGTCCCCAGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR TCA 72 bp | CTAGAAATGGTCGAGGTTTCTGGGGACGTGCTTCTCTaGGCTATACTCCTATTTCCCATAGAAAGGGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LEMVEVSGDVLL*AILLFPIERGR Trigger: CCTACCCCTTTCTATGGGAAATAGGAGTATAGCTCAGAGAAGCACGTCCCCAGAAACCTCGACCATTTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR GCA 72 bp | CAGTCAGCTCGAGAGTATCACACTGCTCTTGCTCAGTaGAAGTTCACCCCTTCACTGATAATTCACCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: QSAREYHTALAQ*KFTPSLIIHPH Trigger: ATGAGGGTGAATTATCAGTGAAGGGGTGAACTTGCACTGAGCAAGAGCAGTGTGATACTCTCGAGCTGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR GCA 72 bp | CCTCTGTCAGTCAGCTCGAGAGTATCACACTGCTCTTaGTCAGTGCAAGTTCACCCCTTCACTGATAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: PLSVSSRVSHCS*SVQVHPFTDNS Trigger: TGAATTATCAGTGAAGGGGTGAACTTGCACTGAGCAAGAGCAGTGTGATACTCTCGAGCTGACTGACAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGGAAGGGAAGGCCACTCCTCTGTGCAGGTGTGCTTTCTCCAAACCATGACCGCTCTAAGAACAGAATaGGGAATTGATGATAGTACA | + |
|
Preference number: 3 (lower is better) Translates to: KGREGHSSVQVCFLQTMTALRTE*GIDDST Trigger: TGTACTATCATCAATTCCCAATTCTGTTCTTAGAGC...GGTCATGGTTTGGAGAAAGCACACCTGCACAGAGGAGTGGCCTTCCCTTCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTCAGCTCGAGAGTATCACACTGCTCTTGCTCAGTGCAAGTTCACCCCTTCCCAGCACCATATTTCTaGGGTATGTATGAGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: SVSSRVSHCSCSVQVHPFPAPYF*GMYEET Trigger: AGTTTCCTCATACATACCCAAGAAATATGGTGCTGG...GAAGGGGTGAACTTGCACTGAGCAAGAGCAGTGTGATACTCTCGAGCTGACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR TCA 72 bp | AATCTCCACACCAGCACCATATTTCTTGGGTATGTATaGGGAAACTTCGGGCTGTGGATGCTCCCATTACCA | + |
|
Preference number: 3 (lower is better) Translates to: NLHTSTIFLGYV*GNFGLWMLPLP Trigger: TGGTAATGGGAGCATCCACAGCCCGAAGTTTCCTCATACATACCCAAGAAATATGGTGCTGGTGTGGAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| 3UTR TCA 72 bp | ACATTCCTCGTGGTGTTCCAGAGCCACATCAGTGAGTaGCTTATGCAATCCCTTGACTCCAGTTTTTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TFLVVFQSHISE*LMQSLDSSFWS Trigger: AGACCAAAAACTGGAGTCAAGGGATTGCATAAGTCACTCACTGATGTGGCTCTGGAACACCACGAGGAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| 3UTR TCA 72 bp | CATTTAGCAGCTGATGGAGCTATTCCAGGGACGGTCTaGAACTTTAAGTGGTGTAGCCTAGTTTGGAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: HLAADGAIPGTV*NFKWCSLVWRG Trigger: ACCTCTCCAAACTAGGCTACACCACTTAAAGTTTCAGACCGTCCCTGGAATAGCTCCATCAGCTGCTAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR GCA 72 bp | TCTAGAAGGCAGTGCTTTGTGATTGACTCCTCTTGGTaGCTCTGGTCTTTTAGAAGACACTTGAAGTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SRRQCFVIDSSW*LWSFRRHLKSC Trigger: GCAGGACTTCAAGTGTCTTCTAAAAGACCAGAGGCACCAAGAGGAGTCAATCACAAAGCACTGCCTTCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGCAACAAGCCTCTGTCAGTCAGCTCGAGAGTATCACACTGCTCTTGCTCAAGTTTTACCTCTTCCTaGAGGAGATTCAGATTCACC | + |
|
Preference number: 3 (lower is better) Translates to: KSNKPLSVSSRVSHCSCSSFTSS*RRFRFT Trigger: GGTGAATCTGAATCTCCTCAAGGAAGAGGTAAAACT...TGAGCAAGAGCAGTGTGATACTCTCGAGCTGACTGACAGAGGCTTGTTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR GCA 72 bp | TGGTGCCTCTGGTCTTTTAGAAGACACTTGAAGTCCTaGAGGGGAAGGCTATTGAAGCAAACAACTGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: WCLWSFRRHLKS*RGRLLKQTTEN Trigger: ATTCTCAGTTGTTTGCTTCAATAGCCTTCCCCTGCAGGACTTCAAGTGTCTTCTAAAAGACCAGAGGCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTTTCTGTGGTCAGAAGACCATTGTCTGGGCTTCCTCTAGAAGGCAGTGCTAGAAGTTGCCAAGCATaGAAAACTTCAGTCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FVSVVRRPLSGLPLEGSARSCQA*KTSVFP Trigger: AGGAAAGACTGAAGTTTTCAATGCTTGGCAACTTCT...AGCACTGCCTTCTAGAGGAAGCCCAGACAATGGTCTTCTGACCACAGAAACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGCAACAAGCCTCTGTCAGTCAGCTCGAGAGTATCACACTGCTCTTGCTCATACACAAATCCTGAGTaGGATCACCATATCACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KSNKPLSVSSRVSHCSCSYTNPE*DHHITE Trigger: TTCTGTGATATGGTGATCCAACTCAGGATTTGTGTA...TGAGCAAGAGCAGTGTGATACTCTCGAGCTGACTGACAGAGGCTTGTTGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR TCA 72 bp | ACCTTTCCTCCAAATTGCGGAGAAGTTGCCAAGCATTaGAAACTTCAGTCTTTCCTTTCAGCATGGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: TFPPNCGEVAKH*KLQSFLSAWHI Trigger: AATGTGCCATGCTGAAAGGAAAGACTGAAGTTTTCAATGCTTGGCAACTTCTCCGCAATTTGGAGGAAAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | CACCACAAAACTTGGGCACAGATTAAGCATTTACAAGCAATGTATTATGTTGATTCTTTTAGAAGACACTaGAAGTCCTGCAGGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HHKTWAQIKHLQAMYYVDSFRRH*KSCRGR Trigger: CCTTCCCCTGCAGGACTTCAAGTGTCTTCTAAAAGA...ATCAACATAATACATTGCTTGTAAATGCTTAATCTGTGCCCAAGTTTTGTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR TCA 72 bp | ACAGTAACGGGACACTTGACAAGCATACACAAATCCTaGGTTGGATCACCATATCACAGAAAAAGCAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: TVTGHLTSIHKS*VGSPYHRKSNN Trigger: ATTGTTGCTTTTTCTGTGATATGGTGATCCAACTCAGGATTTGTGTATGCTTGTCAAGTGTCCCGTTACTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCAAACAGGTTGGAGAACCAGCACCATATTTCTaGGGTATGTATGAGGAAACT | + |
|
Preference number: 3 (lower is better) Translates to: FEFVENRASVYLCKQVGEPAPYF*GMYEET Trigger: AGTTTCCTCATACATACCCAAGAAATATGGTGCTGG...TTCTCCAACCTGTTTGCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTCAGTCTTTCCTTTCAGCATGGCACATTTAATTCCTATTAACATAGCTGCTCGTGGTTTCTGTGACTaGTGGCATGATAATACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: TSVFPFSMAHLIPINIAARGFCD*WHDNTV Trigger: TACAGTATTATCATGCCACAAGTCACAGAAACCACG...AGCAGCTATGTTAATAGGAATTAAATGTGCCATGCTGAAAGGAAAGACTGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTACTCAAGCTCTGTTCTGTTCGTAGCTCTAAGAACAGAATTGGGAATTGATAGTTTTACCTCTTCCTaGAGGAGATTCAGATTCACC | + |
|
Preference number: 3 (lower is better) Translates to: IYSSSVLFVALRTELGIDSFTSS*RRFRFT Trigger: GGTGAATCTGAATCTCCTCAAGGAAGAGGTAAAACT...ATCAATTCCCAATTCTGTTCTTAGAGCTACGAACAGAACAGAGCTTGAGTAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| 3UTR GCA 72 bp | GAATTGATGATAGTACAGTTGTTATCAAACTGTCCCTaGGACCTACCAATTCTAAAAACTTCCCCATTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ELMIVQLLSNCP*DLPILKTSPFH Trigger: ATGGAATGGGGAAGTTTTTAGAATTGGTAGGTCGCAGGGACAGTTTGATAACAACTGTACTATCATCAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTACTCAAGCTCTGTTCTGTTCGTAGCTCTAAGAACAGAATTGGGAATTGATCCAAGTATTTCTGCATaGTTCACAATCAAGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: IYSSSVLFVALRTELGIDPSISA*FTIKCV Trigger: CACACACTTGATTGTGAACAATGCAGAAATACTTGG...ATCAATTCCCAATTCTGTTCTTAGAGCTACGAACAGAACAGAGCTTGAGTAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR TCA 72 bp | GATGTTGCGTTTAATATAAAAGACATACATCTTGTATaGTTTGGGTTAGGTTGGACAGTAACGGGACACTTG | + |
|
Preference number: 3 (lower is better) Translates to: DVAFNIKDIHLV*FGLGWTVTGHL Trigger: CAAGTGTCCCGTTACTGTCCAACCTAACCCAAATCATACAAGATGTATGTCTTTTATATTAAACGCAACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR TCA 72 bp | ACATGGAGCACGATATCTGAGGCAACAAATGTAATATaGACTGTGAGGTATAAATGTCCTTTCAGTATTATG | + |
|
Preference number: 3 (lower is better) Translates to: TWSTISEATNVI*TVRYKCPFSIM Trigger: CATAATACTGAAAGGACATTTATACCTCACAGTTCATATTACATTTGTTGCCTCAGATATCGTGCTCCATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| 3UTR GCA 72 bp | ATCTATGCAAACAGGTTGGAGAAATCCAAGTATTTCTaGATTGTTCACAATCAAGTGTGTGTTTTTCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: IYANRLEKSKYF*IVHNQVCVFHH Trigger: ATGGTGAAAAACACACACTTGATTGTGAACAATGCAGAAATACTTGGATTTCTCCAACCTGTTTGCATAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR CCA 72 bp | GTAGGAAATGATGTTCACCTAGAATACATGAAACTCTaGCTTAATTTCTGCTATGGTTTAATAGGAAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: VGNDVHLEYMKL*LNFCYGLIGNA Trigger: GGCATTTCCTATTAAACCATAGCAGAAATTAAGCCAGAGTTTCATGTATTCTAGGTGAACATCATTTCCTAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGAAGGGAAGGCCACTCCTCTGTGCAGGTGTGCTTTCTCCAAACCATGACCCGAGTCCCCGTTCTTTaGCCGGCCAGGGCAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGREGHSSVQVCFLQTMTRVPVL*PARADV Trigger: GACATCTGCCCTGGCCGGCCAAAGAACGGGGACTCG...GGTCATGGTTTGGAGAAAGCACACCTGCACAGAGGAGTGGCCTTCCCTTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTAGAAGTCTGCTTTCCTGGCACAGTCCCAGAACCACACCAGCGTCCTAAACGAGTCCCCGTTCTTTaGCCGGCCAGGGCAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLEVCFPGTVPEPHQRPKRVPVL*PARADV Trigger: GACATCTGCCCTGGCCGGCCAAAGAACGGGGACTCG...TTTAGGACGCTGGTGTGGTTCTGGGACTGTGCCAGGAAAGCAGACTTCTAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCAGTGCTCACGTGGGAAACTTCGGGCTGTaGATGCTCCCATTACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LVGMKVACGGTQNASAHVGNFGL*MLPLPD Trigger: ATCTGGTAATGGGAGCATCCACAGCCCGAAGTTTCC...CACGTGAGCACTGGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| 3UTR CAA 72 bp | TCCCATACAGGAAAGCCTTGCCCAAAAGCTGCCATGTaGGCTTGTAGAGGCTGTCCAAGTCCACCTGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SHTGKPCPKAAM*ACRGCPSPPAI Trigger: GATGGCAGGTGGACTTGGACAGCCTCTACAAGCCAACATGGCAGCTTTTGGGCAAGGCTTTCCTGTATGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| CDS-3UTR CCA 90 bp | CTGCGGCCAACGCTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCAAACACTTCCATCACTaGGCTCCTCAACTTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: LRPTLVGMKVACGGTQNAKHFHH*APQLLQ Trigger: TTGTAGAAGTTGAGGAGCCCAGTGATGGAAGTGTTT...GGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAGCGTTGGCCGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCAGTGCTCACGTGACTTATGCAATCCCTTaGCTCCAGTTTTTGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVGMKVACGGTQNASAHVTYAIP*LQFLVS Trigger: TGAGACCAAAAACTGGAGTCAAGGGATTGCATAAGT...CACGTGAGCACTGGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR CCA 90 bp | CAATCCCTTGACTCCAGTTTTTGGTCTCAACTGAAGGACCTCATGGTACTTTTTCGAGTCCCCGTTCTTTaGCCGGCCAGGGCAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QSLDSSFWSQLKDLMVLFRVPVL*PARADV Trigger: GACATCTGCCCTGGCCGGCCAAAGAACGGGGACTCG...AAAAAGTACCATGAGGTCCTTCAGTTGAGACCAAAAACTGGAGTCAAGGGATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTCTGGGGACGTGCTTCTCTGAGCTATACTCCTATTTCCCATAGAAAGGGGTTAGCTCTTCCCGTATaGACACTGAGAAGTTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFWGRASLSYTPISHRKGLALPV*TLRSSG Trigger: CCCGGAACTTCTCAGTGTCCATACGGGAAGAGCTAA...CCCCTTTCTATGGGAAATAGGAGTATAGCTCAGAGAAGCACGTCCCCAGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| 3UTR CAA 72 bp | AGCTCTTCCAAGGTACTGAAGGCAGTCACAGCATTGTaGAGCAGGTCCAATGACAAAGATGAAGGGGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSSKVLKAVTAL*SRSNDKDEGGN Trigger: GTTGCCCCCTTCATCTTTGTCATTGGACCTGCTCAACAATGCTGTGACTGCCTTCAGTACCTTGGAAGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| 3UTR CAA 72 bp | ATCAGCTCTTCCAAGGTACTGAAGGCAGTCACAGCATaGTTGAGCAGGTCCAATGACAAAGATGAAGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISSSKVLKAVTA*LSRSNDKDEGG Trigger: GCCCCCTTCATCTTTGTCATTGGACCTGCTCAACAATGCTGTGACTGCCTTCAGTACCTTGGAAGAGCTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTCTGGGGACGTGCTTCTCTGAGCTATACTCCTATTTCCCATAGAAAGGGGAGAAGTTCCGGGGTGTaGAGCTGTAGAGTTTTACCT | + |
|
Preference number: 4 (lower is better) Translates to: GFWGRASLSYTPISHRKGRSSGV*SCRVLP Trigger: AGGTAAAACTCTACAGCTGCACACCCCGGAACTTCT...CCCCTTTCTATGGGAAATAGGAGTATAGCTCAGAGAAGCACGTCCCCAGAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| 3UTR CAA 72 bp | GACTCCTCTTGGTGCCTCTGGTCTTTTAGAAGACACTaGAAGTCCTGCAGGGGAAGGCTATTGAAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: DSSWCLWSFRRH*KSCRGRLLKQT Trigger: TGTTTGCTTCAATAGCCTTCCCCTGCAGGACTTCAAGTGTCTTCTAAAAGACCAGAGGCACCAAGAGGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTCTGTGGTCAGAAGACCATTGTCTGGGCTTCCTCTAGAAGGCAGTGCTCAAAAGCTGCCATGTTaGCTTGTAGAGGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FVSVVRRPLSGLPLEGSAQKLPC*LVEAVQ Trigger: TTGGACAGCCTCTACAAGCCAACATGGCAGCTTTTG...AGCACTGCCTTCTAGAGGAAGCCCAGACAATGGTCTTCTGACCACAGAAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR GCA 90 bp | GGCCAGAATATGGTATCTGTCCTCTTTAGCTCTTCCCGTATGGACACTGAGAAGTTCTCCTCTTTTCTATaGCAGTCCAGATGCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GQNMVSVLFSSSRMDTEKFSSFL*QSRCWV Trigger: TACCCAGCATCTGGACTGGCATAGAAAAGAGGAGAA...CTTCTCAGTGTCCATACGGGAAGAGCTAAAGAGGACAGATACCATATTCTGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| 3UTR CAA 72 bp | CTACTGCAACTAATCTCCACACCAGCACCATATTTCTaGGGTATGTATGAGGAAACTTCGGGCTGTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQLISTPAPYF*GMYEETSGCGC Trigger: GCATCCACAGCCCGAAGTTTCCTCATACATACCCAAGAAATATGGTGCTGGTGTGGAGATTAGTTGCAGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| 3UTR CAA 72 bp | ACCATGACCGCACCTTTCCTCCAAATTGCGGAGAAGTaGCCAAGCATTGAAAACTTCAGTCTTTCCTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TMTAPFLQIAEK*PSIENFSLSFQ Trigger: CTGAAAGGAAAGACTGAAGTTTTCAATGCTTGGCAACTTCTCCGCAATTTGGAGGAAAGGTGCGGTCATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCATAGAAAGGGGTAGGTTAGCAATGGCTCCATATTTACTCAAGCTCTGTCAGTCACAGCATTGTTaGGCAGGTCCAATGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FPIERGRLAMAPYLLKLCQSQHC*AGPMTK Trigger: CTTTGTCATTGGACCTGCTCAACAATGCTGTGACTG...ACAGAGCTTGAGTAAATATGGAGCCATTGCTAACCTACCCCTTTCTATGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTCTGTGGTCAGAAGACCATTGTCTGGGCTTCCTCTAGAAGGCAGTGCTGAATCCGGGTTCAGATaGAAAATACTCATCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: FVSVVRRPLSGLPLEGSAESGFR*KILIRY Trigger: GTATCTGATGAGTATTTTCCATCTGAACCCGGATTC...AGCACTGCCTTCTAGAGGAAGCCCAGACAATGGTCTTCTGACCACAGAAACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR CCA 90 bp | CTCCTATTTCCCATAGAAAGGGGTAGGTTAGCAATGGCTCCATATTTACTCAAGGACCAGGAGACAACCTaGCCAGAATATGGTATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFPIERGRLAMAPYLLKDQETT*PEYGIC Trigger: ACAGATACCATATTCTGGCCAGGTTGTCTCCTGGTC...CTTGAGTAAATATGGAGCCATTGCTAACCTACCCCTTTCTATGGGAAATAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| 3UTR CAA 72 bp | TTTAGAAGACACTTGAAGTCCTGCAGGGGAAGGCTATaGAAGCAAACAACTGAGAATTTGGTTGGAGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRRHLKSCRGRL*KQTTENLVGDE Trigger: CTCGTCTCCAACCAAATTCTCAGTTGTTTGCTTCAATAGCCTTCCCCTGCAGGACTTCAAGTGTCTTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR CAA 72 bp | CACCTTTCCTCCAAATTGCGGAGAAGTTGCCAAGCATaGAAAACTTCAGTCTTTCCTTTCAGCATGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSKLRRSCQA*KTSVFPFSMAH Trigger: ATGTGCCATGCTGAAAGGAAAGACTGAAGTTTTCAATGCTTGGCAACTTCTCCGCAATTTGGAGGAAAGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR CAA 72 bp | ACTCCAGAGTTTGCTAGCGATCTACATTCATTTCATTaGTTTCTGTGGTCAGAAGACCATTGTCTGGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPEFASDLHSFH*FLWSEDHCLGF Trigger: GAAGCCCAGACAATGGTCTTCTGACCACAGAAACAAATGAAATGAATGTAGATCGCTAGCAAACTCTGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| CDS-3UTR TCA 90 bp | ACTTCAGTCTTTCCTTTCAGCATGGCACATTTAATTCCTATTAACATAGCTGCTCCAGAGCCACATCAGTaGGTGACTTATGCAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVFPFSMAHLIPINIAAPEPHQ*VTYAIP Trigger: AGGGATTGCATAAGTCACTCACTGATGTGGCTCTGG...AGCAGCTATGTTAATAGGAATTAAATGTGCCATGCTGAAAGGAAAGACTGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTCTGTGGTCAGAAGACCATTGTCTGGGCTTCCTCTAGAAGGCAGTGCTTTTTGTAACTTTACGTaGGACACACTGACATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FVSVVRRPLSGLPLEGSAFCNFT*DTLTFI Trigger: AATGAATGTCAGTGTGTCCCACGTAAAGTTACAAAA...AGCACTGCCTTCTAGAGGAAGCCCAGACAATGGTCTTCTGACCACAGAAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR TCA 90 bp | ATTTACTCAAGCTCTGTTCTGTTCGTAGCTCTAAGAACAGAATTGGGAATTGATAGCCACATCAGTGAGTaGCTTATGCAATCCCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: IYSSSVLFVALRTELGIDSHISE*LMQSLD Trigger: GTCAAGGGATTGCATAAGTCACTCACTGATGTGGCT...ATCAATTCCCAATTCTGTTCTTAGAGCTACGAACAGAACAGAGCTTGAGTAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR CCA 90 bp | CTGTCACTCCAGAGTTTGCTAGCGATCTACATTCATTTCATTTGTTTCTGTGGTAACCTGGCCAGAATATaGTATCTGTCCTCTTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLQSLLAIYIHFICFCGNLARI*YLSSLA Trigger: AGCTAAAGAGGACAGATACCATATTCTGGCCAGGTT...ACCACAGAAACAAATGAAATGAATGTAGATCGCTAGCAAACTCTGGAGTGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR GCA 90 bp | TTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCAAACAGGTTGGAGAATTTCCTTTAGAAGTCTaGTTTCCTGGCACAGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FEFVENRASVYLCKQVGEFPLEV*FPGTVP Trigger: TGGGACTGTGCCAGGAAAGCAGACTTCTAAAGGAAA...TTCTCCAACCTGTTTGCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR GCA 90 bp | TTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCAAACAGGTTGGAGAATTCTCCTCTTTTCTATaGCAGTCCAGATGCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FEFVENRASVYLCKQVGEFSSFL*QSRCWV Trigger: TACCCAGCATCTGGACTGGCATAGAAAAGAGGAGAA...TTCTCCAACCTGTTTGCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
||
| CDS-3UTR TCA 90 bp | TTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCAAACAGGTTGGAGAAGTTTTACCTCTTCCTTaGGGAGATTCAGATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FEFVENRASVYLCKQVGEVLPLP*GDSDSP Trigger: TGGTGAATCTGAATCTCCTCAAGGAAGAGGTAAAAC...TTCTCCAACCTGTTTGCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR TCA 90 bp | TTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCAAACAGGTTGGAGAATTACGTGGGACACACTaGCATTCATTGCAATTATGG | + |
|
Preference number: 4 (lower is better) Translates to: FEFVENRASVYLCKQVGELRGTH*HSLQLW Trigger: CCATAATTGCAATGAATGTCAGTGTGTCCCACGTAA...TTCTCCAACCTGTTTGCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS-3UTR CCA 90 bp | TTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCAAACAGGTTGGAGAAGCATATATCGTCTTCTaGATCTTCCAGCCCAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FEFVENRASVYLCKQVGEAYIVF*IFQPKS Trigger: AGATTTGGGCTGGAAGATCCAGAAGACGATATATGC...TTCTCCAACCTGTTTGCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| 3UTR CAA 72 bp | TCAAGCTCTGTTCTGTTCGTAGCTCTAAGAACAGAATaGGGAATTGATGATAGTACAGTTGTTATCAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSVLFVALRTE*GIDDSTVVIKL Trigger: CAGTTTGATAACAACTGTACTATCATCAATTCCCAATTCTGTTCTTAGAGCTACGAACAGAACAGAGCTTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| 3UTR CAA 72 bp | TATAAAAGACATACATCTTGTATGATTTGGGTTAGGTaGGACAGTAACGGGACACTTGACAAGCATACACAA | + |
|
Preference number: 4 (lower is better) Translates to: YKRHTSCMIWVR*DSNGTLDKHTQ Trigger: TTGTGTATGCTTGTCAAGTGTCCCGTTACTGTCCAACCTAACCCAAATCATACAAGATGTATGTCTTTTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
||
| CDS-3UTR CCA 90 bp | CACCACAAAACTTGGGCACAGATTAAGCATTTACAAGCAATGTATTATGTTGATCAGCACCATATTTCTTaGGTATGTATGAGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: HHKTWAQIKHLQAMYYVDQHHIS*VCMRKL Trigger: AAGTTTCCTCATACATACCCAAGAAATATGGTGCTG...ATCAACATAATACATTGCTTGTAAATGCTTAATCTGTGCCCAAGTTTTGTGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| 3UTR CAA 72 bp | ATGCAAACAGGTTGGAGAAATCCAAGTATTTCTGCATaGTTCACAATCAAGTGTGTGTTTTTCACCATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MQTGWRNPSISA*FTIKCVFFTIF Trigger: GAAAATGGTGAAAAACACACACTTGATTGTGAACAATGCAGAAATACTTGGATTTCTCCAACCTGTTTGCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| CDS CCA 90 bp | TGCAACTTGCTGCTCAGGTTGGACTCAGCCCGAGTCCCCGTTCTTTaGCCGGCCAGGGCAGATGTCAGCAGGAGGAGGCCGAGGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CNLLLRLDSARVPVL*PARADVSRRRPRRS Trigger: GCTCCTCCTCGGCCTCCTCCTGCTGACATCTGCCCTGGCCGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| CDS CCA 90 bp | CGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTGCTGCTCAGGTTaGACTCAGCCCGAGTCCCCGTTCTTTGGCCGGCCAGGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RSVPCRWRAATCCSG*TQPESPFFGRPGQM Trigger: CATCTGCCCTGGCCGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 ENSMUST00000143721.2 |
||
| CDS-3UTR CAA 90 bp | CTGCGGCCAACGCTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCAACTTGCTGCTCAGGTaGGACTCAGCCCGAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRPTLVGMKVACGGTQNANLLLR*DSARVP Trigger: GGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTT...GGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAGCGTTGGCCGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
||
| CDS GCA 90 bp | CTTGCACTCCGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTGCTaGTCAGGTTGGACTCAGCCCGAGTCCCCGTTCTTTGGCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LALRSVPCRWRAATC*SGWTQPESPFFGRP Trigger: TGGCCGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
||
| CDS GCA 90 bp | AGTTCCTCCCGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTGCTaGTCAGGTTGGACTCAGCCCGAGTCCCCGTTCTTTGGCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSRSVPCRWRAATC*SGWTQPESPFFGRP Trigger: TGGCCGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGGAGGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS GCA 90 bp | GATCTTGCACTCCGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTaGTGCTCAGGTTGGACTCAGCCCGAGTCCCCGTTCTTTGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: DLALRSVPCRWRAAT*CSGWTQPESPFFGR Trigger: CCGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS GCA 90 bp | TGCCGGGGATCTTGCACTCCGTTCTGTTCCTTGTCGCTGGAGAGCTaGAACTTGCTGCTCAGGTTGGACTCAGCCCGAGTCCCCGTTCTT | + |
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Preference number: 5 (lower is better) Translates to: CRGSCTPFCSLSLES*NLLLRLDSARVPVL Trigger: AAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCCCCGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS CCA 90 bp | CTCTCTCATGCCGGGGATCTTGCACTCCGTTCTGTTCCTTGTCGCTaGAGAGCTGCAACTTGCTGCTCAGGTTGGACTCAGCCCGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LSHAGDLALRSVPCR*RAATCCSGWTQPES Trigger: GGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCCCCGGCATGAGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS GCA 90 bp | TATAGTTCCTCCCGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTaGTGCTCAGGTTGGACTCAGCCCGAGTCCCCGTTCTTTGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: YSSSRSVPCRWRAAT*CSGWTQPESPFFGR Trigger: CCGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGGAGGAACTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS CCA 90 bp | AGTCCAGATGCTGGGTATAGTTCCTCCCGTTCTGTTCCTTGTCGCTaGAGAGCTGCAACTTGCTGCTCAGGTTGGACTCAGCCCGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: SPDAGYSSSRSVPCR*RAATCCSGWTQPES Trigger: GGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGGAGGAACTATACCCAGCATCTGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS-3UTR CAA 90 bp | TCTTGGTGCCTCTGGTCTTTTAGAAGACACTTGAAGTCCTGCAGGGGAAGGCTAAACTTGCTGCTCAGGTaGGACTCAGCCCGAGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: SWCLWSFRRHLKSCRGRLNLLLR*DSARVP Trigger: GGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTT...TAGCCTTCCCCTGCAGGACTTCAAGTGTCTTCTAAAAGACCAGAGGCACCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| CDS-3UTR CAA 90 bp | AAGTCCACCTGCCATCGATCTGGCTCTAGGTACCGAATCAGCTCTTCCAAGGTACTCCCGTTCTGTTCCTaGTCGCTGGAGAGCTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: KSTCHRSGSRYRISSSKVLPFCS*SLESCN Trigger: GTTGCAGCTCTCCAGCGACAAGGAACAGAACGGGAG...TACCTTGGAAGAGCTGATTCGGTACCTAGAGCCAGATCGATGGCAGGTGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS GCA 90 bp | CTCCCATTACCAGATATAGTGACAACTCTCTCATGCCGGGGATCTTaGACTCCGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LPLPDIVTTLSCRGS*TPFCSLSLESCNLL Trigger: CAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCCCCGGCATGAGAGAGTTGTCACTATATCTGGTAATGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS-3UTR CAA 90 bp | CTGGTGGGGATGAAGGTTGCTTGTGGGGGTACACAGAATGCCAGTGCTCACGTGAGTTTTACCTCTTCCTaGAGGAGATTCAGATTCACC | + |
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Preference number: 5 (lower is better) Translates to: LVGMKVACGGTQNASAHVSFTSS*RRFRFT Trigger: GGTGAATCTGAATCTCCTCAAGGAAGAGGTAAAACT...CACGTGAGCACTGGCATTCTGTGTACCCCCACAAGCAACCTTCATCCCCACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS-3UTR CAA 90 bp | GGGCAATGGATCATATCATTCTCATTATCGCTCCTTCTTTCTGTCCTCCATTTTAACTTGCTGCTCAGGTaGGACTCAGCCCGAGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: GQWIISFSLSLLLSVLHFNLLLR*DSARVP Trigger: GGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTT...AAAATGGAGGACAGAAAGAAGGAGCGATAATGAGAATGATATGATCCATTGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143721.2 |
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| CDS-3UTR CAA 90 bp | CTCCTATTTCCCATAGAAAGGGGTAGGTTAGCAATGGCTCCATATTTACTCAAGACTCCGTTCTGTTCCTaGTCGCTGGAGAGCTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: LLFPIERGRLAMAPYLLKTPFCS*SLESCN Trigger: GTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGT...CTTGAGTAAATATGGAGCCATTGCTAACCTACCCCTTTCTATGGGAAATAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS-3UTR CAA 90 bp | CTGCTCTCTAAAAGCTTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCCTGGAGAGCTGCAACTaGCTGCTCAGGTTGGACTCA | + |
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Preference number: 5 (lower is better) Translates to: LLSKSFEFVENRASVYLCLESCN*LLRLDS Trigger: TGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAG...GCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAAGCTTTTAGAGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| CDS-3UTR CAA 90 bp | ACTTCAGTCTTTCCTTTCAGCATGGCACATTTAATTCCTATTAACATAGCTGCTCTCCCGTTCTGTTCCTaGTCGCTGGAGAGCTGCAAC | + |
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Preference number: 5 (lower is better) Translates to: TSVFPFSMAHLIPINIAALPFCS*SLESCN Trigger: GTTGCAGCTCTCCAGCGACAAGGAACAGAACGGGAG...AGCAGCTATGTTAATAGGAATTAAATGTGCCATGCTGAAAGGAAAGACTGAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129285.8 |
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| CDS-3UTR CAA 90 bp | TTTGAGTTTGTAGAAAACAGAGCATCTGTCTATCTATGCAAACAGGTTGGAGAACTGGAGAGCTGCAACTaGCTGCTCAGGTTGGACTCA | + |
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Preference number: 5 (lower is better) Translates to: FEFVENRASVYLCKQVGELESCN*LLRLDS Trigger: TGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAG...TTCTCCAACCTGTTTGCATAGATAGACAGATGCTCTGTTTTCTACAAACTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 |
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| CDS-3UTR CAA 90 bp | CTGTCACTCCAGAGTTTGCTAGCGATCTACATTCATTTCATTTGTTTCTGTGGTCGTGGTTTCTGTGACTaGTGGCATGATAATACTGTA | + |
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Preference number: 5 (lower is better) Translates to: LSLQSLLAIYIHFICFCGRGFCD*WHDNTV Trigger: TACAGTATTATCATGCCACAAGTCACAGAAACCACG...ACCACAGAAACAAATGAAATGAATGTAGATCGCTAGCAAACTCTGGAGTGACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS CAA 90 bp | CTGCAACTTGCTGCTCAGGTTGGACTCAGCCCGAGTCCCCGTTCTTaGGCCGGCCAGGGCAGATGTCAGCAGGAGGAGGCCGAGGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LQLAAQVGLSPSPRS*AGQGRCQQEEAEEE Trigger: CTCCTCCTCGGCCTCCTCCTGCTGACATCTGCCCTGGCCGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS CCA 72 bp | CCTTGTCGCTGGAGAGCTGCAACTTGCTGCTCAGGTTaGACTCAGCCCGAGTCCCCGTTCTTTGGCCGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PCRWRAATCCSG*TQPESPFFGRP Trigger: TGGCCGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS CAA 72 bp | TCCTTGTCGCTGGAGAGCTGCAACTTGCTGCTCAGGTaGGACTCAGCCCGAGTCCCCGTTCTTTGGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SLSLESCNLLLR*DSARVPVLWPA Trigger: GGCCGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS GCA 72 bp | CTCCGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTaGTGCTCAGGTTGGACTCAGCCCGAGTCCCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: LRSVPCRWRAAT*CSGWTQPESPF Trigger: GAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS GCA 72 bp | TCCCGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTaGTGCTCAGGTTGGACTCAGCCCGAGTCCCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: SRSVPCRWRAAT*CSGWTQPESPF Trigger: GAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS CAA 90 bp | GGATCTTGCACTCCGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTaGCTGCTCAGGTTGGACTCAGCCCGAGTCCCCGTTCTTTGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GSCTPFCSLSLESCN*LLRLDSARVPVLWP Trigger: CGGCCAAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS CCA 72 bp | GCCGGGGATCTTGCACTCCGTTCTGTTCCTTGTCGCTaGAGAGCTGCAACTTGCTGCTCAGGTTGGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: AGDLALRSVPCR*RAATCCSGWTQ Trigger: CTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCCCCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS CAA 90 bp | GTGACAACTCTCTCATGCCGGGGATCTTGCACTCCGTTCTGTTCCTaGTCGCTGGAGAGCTGCAACTTGCTGCTCAGGTTGGACTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VTTLSCRGSCTPFCS*SLESCNLLLRLDSA Trigger: GGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCCCCGGCATGAGAGAGTTGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS GCA 72 bp | CGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTGCTaGTCAGGTTGGACTCAGCCCGAGTCCCCGTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RSVPCRWRAATC*SGWTQPESPFF Trigger: AAAGAACGGGGACTCGGGCTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029652.4 ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS CAA 72 bp | CTCTCATGCCGGGGATCTTGCACTCCGTTCTGTTCCTaGTCGCTGGAGAGCTGCAACTTGCTGCTCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LSCRGSCTPFCS*SLESCNLLLRL Trigger: CAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCCCCGGCATGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS CCA 72 bp | GCTGGGTATAGTTCCTCCCGTTCTGTTCCTTGTCGCTaGAGAGCTGCAACTTGCTGCTCAGGTTGGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: AGYSSSRSVPCR*RAATCCSGWTQ Trigger: CTGAGTCCAACCTGAGCAGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGGAGGAACTATACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129285.8 ENSMUST00000143721.2 |
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| CDS GCA 72 bp | CCAGATATAGTGACAACTCTCTCATGCCGGGGATCTTaGACTCCGTTCTGTTCCTTGTCGCTGGAGAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PDIVTTLSCRGS*TPFCSLSLESC Trigger: GCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCCCCGGCATGAGAGAGTTGTCACTATATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS CAA 72 bp | ACCAGATATAGTGACAACTCTCTCATGCCGGGGATCTaGCACTCCGTTCTGTTCCTTGTCGCTGGAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: TRYSDNSLMPGI*HSVLFLVAGEL Trigger: CAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCCCCGGCATGAGAGAGTTGTCACTATATCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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| CDS CAA 90 bp | GCTCCCATTACCAGATATAGTGACAACTCTCTCATGCCGGGGATCTaGCACTCCGTTCTGTTCCTTGTCGCTGGAGAGCTGCAACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: APITRYSDNSLMPGI*HSVLFLVAGELQLA Trigger: AGCAAGTTGCAGCTCTCCAGCGACAAGGAACAGAACGGAGTGCAAGATCCCCGGCATGAGAGAGTTGTCACTATATCTGGTAATGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029652.4 |
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