Pregenerated sensors for PDGFB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000489Ensembl transcript IDs: ENSMUST00000000500.8, ENSMUST00000229795.2, ENSMUST00000229912.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGCCTGGAGTGGAGTCCTTTGCATCTGGAGCTGCAGGGCGGGCTaGGGAATCGCTGCTGGTGGAGGTGGCCGGGCACACGGGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: AAWSGVLCIWSCRAG*GIAAGGGGRAHGVR Trigger: CCTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAAAGGACTCCACTCCAGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 90 bp | GTGGTCCAGGAACCAGGCAGGACATGCAGAGGTCCTCGGGCTAAGTaGCAGGCTCTGGGGCCAGTCCACAGTCCACGTCCCCCGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: VVQEPGRTCRGPRAK*QALGPVHSPRPPAR Trigger: CCTTGCCGGGGGACGTGGACTGTGGACTGGCCCCAGAGCCTGGCACTTAGCCCGAGGACCTCTGCATGTCCTGCCTGGTTCCTGGACCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 90 bp | CATCTGGAGCTGCAGGGCGGGCTGAGGAATCGCTGCTGGTGGAGGTaGCCGGGCACACGGGGTGAGGGAAGCACCATTGGCCGTCCGAAT | + |
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Preference number: 1 (lower is better) Translates to: HLELQGGLRNRCWWR*PGTRGEGSTIGRPN Trigger: ATTCGGACGGCCAATGGTGCTTCCCTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 90 bp | CCTTTGCATCTGGAGCTGCAGGGCGGGCTGAGGAATCGCTGCTGGTaGAGGTGGCCGGGCACACGGGGTGAGGGAAGCACCATTGGCCGT | + |
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Preference number: 1 (lower is better) Translates to: PLHLELQGGLRNRCW*RWPGTRGEGSTIGR Trigger: ACGGCCAATGGTGCTTCCCTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAAAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 90 bp | TGGAGTCCTTTGCATCTGGAGCTGCAGGGCGGGCTGAGGAATCGCTaGTGGTGGAGGTGGCCGGGCACACGGGGTGAGGGAAGCACCATT | + |
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Preference number: 1 (lower is better) Translates to: WSPLHLELQGGLRNR*WWRWPGTRGEGSTI Trigger: AATGGTGCTTCCCTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAAAGGACTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 90 bp | ATGTTCCCTGCTGGCTGGCCAGTGGTCCAGGAACCAGGCAGGACATaGAGAGGTCCTCGGGCTAAGTGCCAGGCTCTGGGGCCAGTCCAC | + |
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Preference number: 1 (lower is better) Translates to: MFPAGWPVVQEPGRT*RGPRAKCQALGPVH Trigger: GTGGACTGGCCCCAGAGCCTGGCACTTAGCCCGAGGACCTCTGCATGTCCTGCCTGGTTCCTGGACCACTGGCCAGCCAGCAGGGAACAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 90 bp | GGACTGCAAGGGACCCTAGCCTGCCTGAACATGTTCCCTGCTGGCTaGCCAGTGGTCCAGGAACCAGGCAGGACATGCAGAGGTCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: GLQGTLACLNMFPAG*PVVQEPGRTCRGPR Trigger: CCGAGGACCTCTGCATGTCCTGCCTGGTTCCTGGACCACTGGCCAGCCAGCAGGGAACATGTTCAGGCAGGCTAGGGTCCCTTGCAGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 90 bp | TGCCACAGGACTGCAAGGGACCCTAGCCTGCCTGAACATGTTCCCTaGTGGCTGGCCAGTGGTCCAGGAACCAGGCAGGACATGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: CHRTARDPSLPEHVP*WLASGPGTRQDMQR Trigger: CCTCTGCATGTCCTGCCTGGTTCCTGGACCACTGGCCAGCCAGCAGGGAACATGTTCAGGCAGGCTAGGGTCCCTTGCAGTCCTGTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 90 bp | CTCCAGTCTGTGCTCCCTGCCACAGGACTGCAAGGGACCCTAGCCTaGCTGAACATGTTCCCTGCTGGCTGGCCAGTGGTCCAGGAACCA | + |
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Preference number: 1 (lower is better) Translates to: LQSVLPATGLQGTLA*LNMFPAGWPVVQEP Trigger: TGGTTCCTGGACCACTGGCCAGCCAGCAGGGAACATGTTCAGGCAGGCTAGGGTCCCTTGCAGTCCTGTGGCAGGGAGCACAGACTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 90 bp | CACAGGACTGCAAGGGACCCTAGCCTGCCTGAACATGTTCCCTGCTaGCTGGCCAGTGGTCCAGGAACCAGGCAGGACATGCAGAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: HRTARDPSLPEHVPC*LASGPGTRQDMQRS Trigger: GGACCTCTGCATGTCCTGCCTGGTTCCTGGACCACTGGCCAGCCAGCAGGGAACATGTTCAGGCAGGCTAGGGTCCCTTGCAGTCCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 90 bp | GTCCACGTCCCCCGGCAAGGCTCCTGCACACTTGTTCCAGGTTCTTaGAGTCAAGAGAAGCCTGCAGCCTGGAGTGGAGTCCTTTGCATC | + |
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Preference number: 1 (lower is better) Translates to: VHVPRQGSCTLVPGS*SQEKPAAWSGVLCI Trigger: GATGCAAAGGACTCCACTCCAGGCTGCAGGCTTCTCTTGACTCCAAGAACCTGGAACAAGTGTGCAGGAGCCTTGCCGGGGGACGTGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 90 bp | TGCTCACCCTGCTTGGCTGGAGTGGAATATAAGAGACAGGTCTCCTaGCCTAGGGAGGAATGGCGGGCATTCAGGGCCTCAATCGGGATC | + |
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Preference number: 1 (lower is better) Translates to: CSPCLAGVEYKRQVS*PREEWRAFRASIGI Trigger: GATCCCGATTGAGGCCCTGAATGCCCGCCATTCCTCCCTAGGGCAGGAGACCTGTCTCTTATATTCCACTCCAGCCAAGCAGGGTGAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 90 bp | ACTTGTTCCAGGTTCTTGGAGTCAAGAGAAGCCTGCAGCCTGGAGTaGAGTCCTTTGCATCTGGAGCTGCAGGGCGGGCTGAGGAATCGC | + |
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Preference number: 1 (lower is better) Translates to: TCSRFLESREACSLE*SPLHLELQGGLRNR Trigger: GCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAAAGGACTCCACTCCAGGCTGCAGGCTTCTCTTGACTCCAAGAACCTGGAACAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 90 bp | ACTTTACAAACTGAAGGAAGCAGAAGGAACGGGGACGGGAAAGTGTaGGAAGGGAGGCGGGCCAGGTCAATCCGTCCTCCCAAGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: TLQTEGSRRNGDGKV*EGRRARSIRPPKGS Trigger: AGAGCCCTTGGGAGGACGGATTGACCTGGCCCGCCTCCCTTCCCACACTTTCCCGTCCCCGTTCCTTCTGCTTCCTTCAGTTTGTAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 90 bp | CACCTGTCAGGAAGGGGACAGCTGAGACCCAGGAAGTGGAGGCAATaGACAGACAACAGGGTTGCTTCCCCAGTACCATGGGCTCATTCT | + |
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Preference number: 1 (lower is better) Translates to: HLSGRGQLRPRKWRQ*TDNRVASPVPWAHS Trigger: AGAATGAGCCCATGGTACTGGGGAAGCAACCCTGTTGTCTGTCCATTGCCTCCACTTCCTGGGTCTCAGCTGTCCCCTTCCTGACAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 90 bp | AGTGCATCATGTGCAATATACATCCCATTACAACCTTGCTCACCCTaGTTGGCTGGAGTGGAATATAAGAGACAGGTCTCCTGCCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: SASCAIYIPLQPCSP*LAGVEYKRQVSCPR Trigger: CCTAGGGCAGGAGACCTGTCTCTTATATTCCACTCCAGCCAAGCAGGGTGAGCAAGGTTGTAATGGGATGTATATTGCACATGATGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 90 bp | TCCACACGCAGTGCATCATGTGCAATATACATCCCATTACAACCTTaGTCACCCTGCTTGGCTGGAGTGGAATATAAGAGACAGGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: STRSASCAIYIPLQP*SPCLAGVEYKRQVS Trigger: GGAGACCTGTCTCTTATATTCCACTCCAGCCAAGCAGGGTGAGCAAGGTTGTAATGGGATGTATATTGCACATGATGCACTGCGTGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTCTCCTGCCCTAGGGAGGAATGGCGGGCATTCAGGGCCTCAATCGGGATCCGCCGGGCACACGGGGTaGGGGAAGCACCATTGGCCG | + |
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Preference number: 2 (lower is better) Translates to: RSPALGRNGGHSGPQSGSAGHTG*GKHHWP Trigger: CGGCCAATGGTGCTTCCCTCACCCCGTGTGCCCGGC...GGATCCCGATTGAGGCCCTGAATGCCCGCCATTCCTCCCTAGGGCAGGAGACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTCCTCCAGTCTGTGCTCCCTGCCACAGGACTGCAAGGGACCCTAGCCTGCGCTGCTGGTGGAGGTaGCCGGGCACACGGGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: RVPPVCAPCHRTARDPSLRCWWR*PGTRGE Trigger: CTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCG...CAGGCTAGGGTCCCTTGCAGTCCTGTGGCAGGGAGCACAGACTGGAGGAACTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CAA 90 bp | GGGGCCAGTCCACAGTCCACGTCCCCCGGCAAGGCTCCTGCACACTaGTTCCAGGTTCTTGGAGTCAAGAGAAGCCTGCAGCCTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: GASPQSTSPGKAPAH*FQVLGVKRSLQPGV Trigger: CACTCCAGGCTGCAGGCTTCTCTTGACTCCAAGAACCTGGAACAAGTGTGCAGGAGCCTTGCCGGGGGACGTGGACTGTGGACTGGCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR GCA 90 bp | GGAAAGTGTGGGAAGGGAGGCGGGCCAGGTCAATCCGTCCTCCCAAGGGCTCTATGGAGTGGAGTCCTTTaGATCTGGAGCTGCAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: GKCGKGGGPGQSVLPRALWSGVL*IWSCRA Trigger: CGCCCTGCAGCTCCAGATGCAAAGGACTCCACTCCA...TAGAGCCCTTGGGAGGACGGATTGACCTGGCCCGCCTCCCTTCCCACACTTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGGGCTGTTCCTCCCTTGGAGGTCTCCTAGTGCCCCTCACCTGTCAGGAAGGCCCCGGCAAGGCTCCTaGACACTTGTTCCAGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RGLFLPWRSPSAPHLSGRPRQGS*TLVPGS Trigger: AGAACCTGGAACAAGTGTGCAGGAGCCTTGCCGGGG...CCTTCCTGACAGGTGAGGGGCACTAGGAGACCTCCAAGGGAGGAACAGCCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CAA 90 bp | AGGTTCTTGGAGTCAAGAGAAGCCTGCAGCCTGGAGTGGAGTCCTTaGCATCTGGAGCTGCAGGGCGGGCTGAGGAATCGCTGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RFLESREACSLEWSP*HLELQGGLRNRCWW Trigger: CCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAAAGGACTCCACTCCAGGCTGCAGGCTTCTCTTGACTCCAAGAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR TCA 90 bp | CGAGGGCTGTTCCTCCCTTGGAGGTCTCCTAGTGCCCCTCACCTGTCAGGAAGGCGTGGAGGAGCAGACTaGAGGGCACATGAGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: RGLFLPWRSPSAPHLSGRRGGAD*RAHEEE Trigger: TTCTTCCTCATGTGCCCTTCAGTCTGCTCCTCCACG...CCTTCCTGACAGGTGAGGGGCACTAGGAGACCTCCAAGGGAGGAACAGCCCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTGCCCTAGGGAGGAATGGCGGGCATTCAGGGCCTCAATCGGGATCCGAAACAGGAAGAGATGAGTaGGTGGCAGATCTGGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: SPALGRNGGHSGPQSGSETGRDE*VADLGA Trigger: GGCACCCAGATCTGCCACGCACTCATCTCTTCCTGT...TTCGGATCCCGATTGAGGCCCTGAATGCCCGCCATTCCTCCCTAGGGCAGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CAA 90 bp | AGTCCACGTCCCCCGGCAAGGCTCCTGCACACTTGTTCCAGGTTCTaGGAGTCAAGAGAAGCCTGCAGCCTGGAGTGGAGTCCTTTGCAT | + |
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Preference number: 2 (lower is better) Translates to: SPRPPARLLHTCSRF*ESREACSLEWSPLH Trigger: ATGCAAAGGACTCCACTCCAGGCTGCAGGCTTCTCTTGACTCCAAGAACCTGGAACAAGTGTGCAGGAGCCTTGCCGGGGGACGTGGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTCCTTTGCATCTGGAGCTGCAGGGCGGGCTGAGGAATCGCTGCTGGTGGACTCCAAGGACCCCATaGGGGCAATACAGCAAATAC | + |
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Preference number: 2 (lower is better) Translates to: WSPLHLELQGGLRNRCWWTPRTP*GQYSKY Trigger: GTATTTGCTGTATTGCCCCCATGGGGTCCTTGGAGT...CCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAAAGGACTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR CCA 90 bp | CGAGGGCTGTTCCTCCCTTGGAGGTCTCCTAGTGCCCCTCACCTGTCAGGAAGGAGGAAGTGGAGGCAATaGACAGACAACAGGGTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RGLFLPWRSPSAPHLSGRRKWRQ*TDNRVA Trigger: AGCAACCCTGTTGTCTGTCCATTGCCTCCACTTCCT...CCTTCCTGACAGGTGAGGGGCACTAGGAGACCTCCAAGGGAGGAACAGCCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CAA 90 bp | GGGCTCTCCCTCTCTCCCCCACTTCCAATCTACTGGCTAGCTTCCTaGAAGGAGCCATCGGGTAGAACCGCAAAAGATCAGAGGGACACC | + |
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Preference number: 2 (lower is better) Translates to: GLSLSPPLPIYWLAS*KEPSGRTAKDQRDT Trigger: GGTGTCCCTCTGATCTTTTGCGGTTCTACCCGATGGCTCCTTCAAGGAAGCTAGCCAGTAGATTGGAAGTGGGGGAGAGAGGGAGAGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTGGCTGGAGTGGAATATAAGAGACAGGTCTCCTGCCCTAGGGAGGAATGGCATGTTCCCTGCTGGCTaGCCAGTGGTCCAGGAACCA | + |
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Preference number: 2 (lower is better) Translates to: AWLEWNIRDRSPALGRNGMFPAG*PVVQEP Trigger: TGGTTCCTGGACCACTGGCCAGCCAGCAGGGAACAT...GCCATTCCTCCCTAGGGCAGGAGACCTGTCTCTTATATTCCACTCCAGCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTGCATCATGTGCAATATACATCCCATTACAACCTTGCTCACCCTGCTTGGCAAGAGACAGGTCTCCTaGCCTAGGGAGGAATGGCGG | + |
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Preference number: 2 (lower is better) Translates to: QCIMCNIHPITTLLTLLGKRQVS*PREEWR Trigger: CCGCCATTCCTCCCTAGGGCAGGAGACCTGTCTCTT...GCCAAGCAGGGTGAGCAAGGTTGTAATGGGATGTATATTGCACATGATGCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTCCCCCACTTCCAATCTACTGGCTAGCTTCCTTGAAGGAGCCATCGGGTCTTGCTCACCCTGCTTaGCTGGAGTGGAATATAAGA | + |
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Preference number: 2 (lower is better) Translates to: LSPPLPIYWLASLKEPSGLAHPA*LEWNIR Trigger: TCTTATATTCCACTCCAGCCAAGCAGGGTGAGCAAG...ACCCGATGGCTCCTTCAAGGAAGCTAGCCAGTAGATTGGAAGTGGGGGAGAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGCATCATGTGCAATATACATCCCATTACAACCTTGCTCACCCTGCTTGGCTGCCTGCAGCCTGGAGTaGAGTCCTTTGCATCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SASCAIYIPLQPCSPCLAACSLE*SPLHLE Trigger: CTCCAGATGCAAAGGACTCCACTCCAGGCTGCAGGC...AGCCAAGCAGGGTGAGCAAGGTTGTAATGGGATGTATATTGCACATGATGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCATCATGTGCAATATACATCCCATTACAACCTTGCTCACCCTGCTTGGCAATGAAAAGCCACTGTaGGCTGAGGGGACAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: QCIMCNIHPITTLLTLLGNEKPL*AEGTGR Trigger: TCTTCCTGTCCCCTCAGCCCACAGTGGCTTTTCATT...GCCAAGCAGGGTGAGCAAGGTTGTAATGGGATGTATATTGCACATGATGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTCTCCACACGCAGTGCATCATGTGCAATATACATCCCATTACAACCTTGAGACTGAAGGGCACATaGGGAAGAAGACACAGAGTG | + |
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Preference number: 2 (lower is better) Translates to: SSLHTQCIMCNIHPITTLRLKGT*GRRHRV Trigger: CACTCTGTGTCTTCTTCCTCATGTGCCCTTCAGTCT...CAAGGTTGTAATGGGATGTATATTGCACATGATGCACTGCGTGTGGAGACTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 72 bp | CTGGAGCTGCAGGGCGGGCTGAGGAATCGCTGCTGGTaGAGGTGGCCGGGCACACGGGGTGAGGGAAGCACC | + |
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Preference number: 3 (lower is better) Translates to: LELQGGLRNRCW*RWPGTRGEGST Trigger: GGTGCTTCCCTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 72 bp | CTGCAGGGCGGGCTGAGGAATCGCTGCTGGTGGAGGTaGCCGGGCACACGGGGTGAGGGAAGCACCATTGGC | + |
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Preference number: 3 (lower is better) Translates to: LQGGLRNRCWWR*PGTRGEGSTIG Trigger: GCCAATGGTGCTTCCCTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCGATTCCTCAGCCCGCCCTGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 72 bp | CATCTGGAGCTGCAGGGCGGGCTGAGGAATCGCTGCTaGTGGAGGTGGCCGGGCACACGGGGTGAGGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: HLELQGGLRNRC*WRWPGTRGEGS Trigger: GCTTCCCTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 72 bp | TTGCATCTGGAGCTGCAGGGCGGGCTGAGGAATCGCTaGTGGTGGAGGTGGCCGGGCACACGGGGTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LHLELQGGLRNR*WWRWPGTRGEG Trigger: TCCCTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 72 bp | GGACATGCAGAGGTCCTCGGGCTAAGTGCCAGGCTCTaGGGCCAGTCCACAGTCCACGTCCCCCGGCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: GHAEVLGLSARL*GQSTVHVPRQG Trigger: GCCTTGCCGGGGGACGTGGACTGTGGACTGGCCCCAGAGCCTGGCACTTAGCCCGAGGACCTCTGCATGTCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 72 bp | GCTGGCTGGCCAGTGGTCCAGGAACCAGGCAGGACATaGAGAGGTCCTCGGGCTAAGTGCCAGGCTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: AGWPVVQEPGRT*RGPRAKCQALG Trigger: CCCCAGAGCCTGGCACTTAGCCCGAGGACCTCTGCATGTCCTGCCTGGTTCCTGGACCACTGGCCAGCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR TCA 72 bp | GAATCGCTGCTGGTGGAGGTGGCCGGGCACACGGGGTaGGGGAAGCACCATTGGCCGTCCGAATCAGGCATC | + |
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Preference number: 3 (lower is better) Translates to: ESLLVEVAGHTG*GKHHWPSESGI Trigger: GATGCCTGATTCGGACGGCCAATGGTGCTTCCCTCACCCCGTGTGCCCGGCCACCTCCACCAGCAGCGATTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 72 bp | GAACCAGGCAGGACATGCAGAGGTCCTCGGGCTAAGTaGCAGGCTCTGGGGCCAGTCCACAGTCCACGTCCC | + |
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Preference number: 3 (lower is better) Translates to: EPGRTCRGPRAK*QALGPVHSPRP Trigger: GGGACGTGGACTGTGGACTGGCCCCAGAGCCTGGCACTTAGCCCGAGGACCTCTGCATGTCCTGCCTGGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR GCA 72 bp | ACTGCAAGGGACCCTAGCCTGCCTGAACATGTTCCCTaGTGGCTGGCCAGTGGTCCAGGAACCAGGCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: TARDPSLPEHVP*WLASGPGTRQD Trigger: GTCCTGCCTGGTTCCTGGACCACTGGCCAGCCAGCAGGGAACATGTTCAGGCAGGCTAGGGTCCCTTGCAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 72 bp | GGGACCCTAGCCTGCCTGAACATGTTCCCTGCTGGCTaGCCAGTGGTCCAGGAACCAGGCAGGACATGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GTLACLNMFPAG*PVVQEPGRTCR Trigger: TCTGCATGTCCTGCCTGGTTCCTGGACCACTGGCCAGCCAGCAGGGAACATGTTCAGGCAGGCTAGGGTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 72 bp | GCAAGGGACCCTAGCCTGCCTGAACATGTTCCCTGCTaGCTGGCCAGTGGTCCAGGAACCAGGCAGGACATG | + |
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Preference number: 3 (lower is better) Translates to: ARDPSLPEHVPC*LASGPGTRQDM Trigger: CATGTCCTGCCTGGTTCCTGGACCACTGGCCAGCCAGCAGGGAACATGTTCAGGCAGGCTAGGGTCCCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR TCA 72 bp | CAACAGGGTTGCTTCCCCAGTACCATGGGCTCATTCTaGGCTTCAGGCTGGGCCAGGGCACACACAGCCACT | + |
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Preference number: 3 (lower is better) Translates to: QQGCFPSTMGSF*ASGWARAHTAT Trigger: AGTGGCTGTGTGTGCCCTGGCCCAGCCTGAAGCTCAGAATGAGCCCATGGTACTGGGGAAGCAACCCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| 3UTR CCA 72 bp | CCCCGGCAAGGCTCCTGCACACTTGTTCCAGGTTCTTaGAGTCAAGAGAAGCCTGCAGCCTGGAGTGGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PRQGSCTLVPGS*SQEKPAAWSGV Trigger: GACTCCACTCCAGGCTGCAGGCTTCTCTTGACTCCAAGAACCTGGAACAAGTGTGCAGGAGCCTTGCCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR TCA 72 bp | CTCCTAGTGCCCCTCACCTGTCAGGAAGGGGACAGCTaGGACCCAGGAAGTGGAGGCAATGGACAGACAACA | + |
|
Preference number: 3 (lower is better) Translates to: LLVPLTCQEGDS*DPGSGGNGQTT Trigger: TGTTGTCTGTCCATTGCCTCCACTTCCTGGGTCTCAGCTGTCCCCTTCCTGACAGGTGAGGGGCACTAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR GCA 72 bp | AAAGAGGCAGGGACACGGCCCAGGTCACACGCACACTaGACCTCTAATCCATCAGAGAAGGTGTGTGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: KEAGTRPRSHAH*TSNPSEKVCGH Trigger: GTGGCCACACACCTTCTCTGATGGATTAGAGGTGCAGTGTGCGTGTGACCTGGGCCGTGTCCCTGCCTCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CCA 72 bp | CTGAGGGGACAGGAAGAGATGAGTGCGTGGCAGATCTaGGTGCCATCAGAGTTCCTCCAGTCTGTGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LRGQEEMSAWQI*VPSEFLQSVLP Trigger: AGGGAGCACAGACTGGAGGAACTCTGATGGCACCCAGATCTGCCACGCACTCATCTCTTCCTGTCCCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CCA 72 bp | CACTGTGGGCTGAGGGGACAGGAAGAGATGAGTGCGTaGCAGATCTGGGTGCCATCAGAGTTCCTCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: HCGLRGQEEMSA*QIWVPSEFLQS Trigger: AGACTGGAGGAACTCTGATGGCACCCAGATCTGCCACGCACTCATCTCTTCCTGTCCCCTCAGCCCACAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR TCA 72 bp | TCAATCGGGATCCGAACACCCCGTGGAGGAGCAGACTaGAGGGCACATGAGGAAGAAGACACAGAGTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SIGIRTPRGGAD*RAHEEEDTEWR Trigger: CCTCCACTCTGTGTCTTCTTCCTCATGTGCCCTTCAGTCTGCTCCTCCACGGGGTGTTCGGATCCCGATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR GCA 72 bp | TGCTTGGCTGGAGTGGAATATAAGAGACAGGTCTCCTaGCCTAGGGAGGAATGGCGGGCATTCAGGGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CLAGVEYKRQVS*PREEWRAFRAS Trigger: TGAGGCCCTGAATGCCCGCCATTCCTCCCTAGGGCAGGAGACCTGTCTCTTATATTCCACTCCAGCCAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR GCA 72 bp | CACACTTGTTCCAGGTTCTTGGAGTCAAGAGAAGCCTaGAGCCTGGAGTGGAGTCCTTTGCATCTGGAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: HTCSRFLESREA*SLEWSPLHLEL Trigger: CAGCTCCAGATGCAAAGGACTCCACTCCAGGCTGCAGGCTTCTCTTGACTCCAAGAACCTGGAACAAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CCA 72 bp | TCCCATTACAACCTTGCTCACCCTGCTTGGCTGGAGTaGAATATAAGAGACAGGTCTCCTGCCCTAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SHYNLAHPAWLE*NIRDRSPALGR Trigger: CCTCCCTAGGGCAGGAGACCTGTCTCTTATATTCCACTCCAGCCAAGCAGGGTGAGCAAGGTTGTAATGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR GCA 72 bp | GGTGTGAACAGCAGTCTCCACACGCAGTGCATCATGTaGAATATACATCCCATTACAACCTTGCTCACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: GVNSSLHTQCIM*NIHPITTLLTL Trigger: CAGGGTGAGCAAGGTTGTAATGGGATGTATATTGCACATGATGCACTGCGTGTGGAGACTGCTGTTCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CCA 72 bp | CAATATACATCCCATTACAACCTTGCTCACCCTGCTTaGCTGGAGTGGAATATAAGAGACAGGTCTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: QYTSHYNLAHPA*LEWNIRDRSPA Trigger: GGCAGGAGACCTGTCTCTTATATTCCACTCCAGCCAAGCAGGGTGAGCAAGGTTGTAATGGGATGTATATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR TCA 72 bp | AACGTCATAATAGGCAAGTTGGCCATATTTAGGGTGTaGACAGCAGTCTCCACACGCAGTGCATCATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NVIIGKLAIFRV*TAVSTRSASCA Trigger: TGCACATGATGCACTGCGTGTGGAGACTGCTGTTCACACCCTAAATATGGCCAACTTGCCTATTATGACGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR GCA 72 bp | GCACCTCTAATCCATCAGAGAAGGTGTGTGGCCACCTaGCCAGAGGAGTTCATGTCTTATAAAATGAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: APLIHQRRCVAT*PEEFMSYKMKS Trigger: GCTTTTCATTTTATAAGACATGAACTCCTCTGGGCAGGTGGCCACACACCTTCTCTGATGGATTAGAGGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR GCA 72 bp | AGTGCATCATGTGCAATATACATCCCATTACAACCTTaGTCACCCTGCTTGGCTGGAGTGGAATATAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SASCAIYIPLQP*SPCLAGVEYKR Trigger: TCTCTTATATTCCACTCCAGCCAAGCAGGGTGAGCAAGGTTGTAATGGGATGTATATTGCACATGATGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CAA 72 bp | GGAGGTGGCCGGGCACACGGGGTGAGGGAAGCACCATaGGCCGTCCGAATCAGGCATCGAGACAGACGGACG | + |
|
Preference number: 4 (lower is better) Translates to: GGGRAHGVREAP*AVRIRHRDRRT Trigger: CGTCCGTCTGTCTCGATGCCTGATTCGGACGGCCAATGGTGCTTCCCTCACCCCGTGTGCCCGGCCACCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCCTCCAGTCTGTGCTCCCTGCCACAGGACTGCAAGGGACCCTAGCCTGGGCCGCATCTGCACCTaGGAGGCCCGGCATTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RVPPVCAPCHRTARDPSLGRICT*EARHCT Trigger: TGTGCAATGCCGGGCCTCGCAGGTGCAGATGCGGCC...CAGGCTAGGGTCCCTTGCAGTCCTGTGGCAGGGAGCACAGACTGGAGGAACTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGCAGAAGGAACGGGGACGGGAAAGTGTGGGAAGGGAGGCGGGCCAGGTCCTGTGCAGCAGGCGCTaGAGATCATCAAAGGAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RKQKERGRESVGREAGQVLCSRR*RSSKER Trigger: CCGCTCCTTTGATGATCTTCAGCGCCTGCTGCACAG...GACCTGGCCCGCCTCCCTTCCCACACTTTCCCGTCCCCGTTCCTTCTGCTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTGAGGGAAGCACCATTGGCCGTCCGAATCAGGCATCGAGACAGACGGACGGCACATTGCGGTTATTaGAGCAGCCGGAGCAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVREAPLAVRIRHRDRRTAHCGY*SSRSSA Trigger: AGCGCTGCTCCGGCTGCTGCAATAACCGCAATGTGC...CGTCCGTCTGTCTCGATGCCTGATTCGGACGGCCAATGGTGCTTCCCTCACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGTCCTTTGCATCTGGAGCTGCAGGGCGGGCTGAGGAATCGCTGCTGGTGGCCCGGCATTGCACATTaGGGTTATTGCAGCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WSPLHLELQGGLRNRCWWPGIAH*GYCSSR Trigger: CCGGCTGCTGCAATAACCGCAATGTGCAATGCCGGG...CCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAAAGGACTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCTGCCCTAGGGAGGAATGGCGGGCATTCAGGGCCTCAATCGGGATCCGAATTCGGTGCTTGCCTTTaGGGGGCCGGCGGATTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPALGRNGGHSGPQSGSEFGACL*GAGGFS Trigger: TGAGAATCCGCCGGCCCCCCAAAGGCAAGCACCGAA...TTCGGATCCCGATTGAGGCCCTGAATGCCCGCCATTCCTCCCTAGGGCAGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CAA 72 bp | GAGTCAAGAGAAGCCTGCAGCCTGGAGTGGAGTCCTTaGCATCTGGAGCTGCAGGGCGGGCTGAGGAATCGC | + |
|
Preference number: 4 (lower is better) Translates to: ESREACSLEWSP*HLELQGGLRNR Trigger: GCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAAAGGACTCCACTCCAGGCTGCAGGCTTCTCTTGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR TCA 90 bp | CTTGTTCCAGGTTCTTGGAGTCAAGAGAAGCCTGCAGCCTGGAGTGGAGTCCTTGATCCCCCTCGGCGCTaGCCAGACGCAGGTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVPGSWSQEKPAAWSGVLDPPRR*PDAGSS Trigger: GCTGCTACCTGCGTCTGGTCAGCGCCGAGGGGGATC...AAGGACTCCACTCCAGGCTGCAGGCTTCTCTTGACTCCAAGAACCTGGAACAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR CCA 90 bp | CGTCCTCCCAAGGGCTCTAGGGCTCTCCCTCTCTCCCCCACTTCCAATCTACTGTTCTCACCGTCCGAATaGTCACCCGAGCTTGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RPPKGSRALPLSPTSNLLFSPSE*SPELEA Trigger: CGCCTCAAGCTCGGGTGACCATTCGGACGGTGAGAA...CAGTAGATTGGAAGTGGGGGAGAGAGGGAGAGCCCTAGAGCCCTTGGGAGGACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CAA 72 bp | CCCCCGGCAAGGCTCCTGCACACTTGTTCCAGGTTCTaGGAGTCAAGAGAAGCCTGCAGCCTGGAGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPARLLHTCSRF*ESREACSLEWS Trigger: ACTCCACTCCAGGCTGCAGGCTTCTCTTGACTCCAAGAACCTGGAACAAGTGTGCAGGAGCCTTGCCGGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CAA 72 bp | CCACAGTCCACGTCCCCCGGCAAGGCTCCTGCACACTaGTTCCAGGTTCTTGGAGTCAAGAGAAGCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQSTSPGKAPAH*FQVLGVKRSLQ Trigger: CTGCAGGCTTCTCTTGACTCCAAGAACCTGGAACAAGTGTGCAGGAGCCTTGCCGGGGGACGTGGACTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR TCA 90 bp | GCTTGGCTGGAGTGGAATATAAGAGACAGGTCTCCTGCCCTAGGGAGGAATGGCATGGTCACCCGAGCTTaGGGCGTCTTGGCTCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AWLEWNIRDRSPALGRNGMVTRA*GVLARC Trigger: GCAGCGAGCCAAGACGCCTCAAGCTCGGGTGACCAT...GCCATTCCTCCCTAGGGCAGGAGACCTGTCTCTTATATTCCACTCCAGCCAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCTCCTGCCCTAGGGAGGAATGGCGGGCATTCAGGGCCTCAATCGGGATCCAAGGAGCGGATGGAGTaGTCGCTCAGCATTTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPALGRNGGHSGPQSGSKERME*SLSISY Trigger: GTATGAAATGCTGAGCGACCACTCCATCCGCTCCTT...GGATCCCGATTGAGGCCCTGAATGCCCGCCATTCCTCCCTAGGGCAGGAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCTCCTGCCCTAGGGAGGAATGGCGGGCATTCAGGGCCTCAATCGGGATCCCATCAAAGGAGCGGATaGAGTGGTCGCTCAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RSPALGRNGGHSGPQSGSHQRSG*SGRSAF Trigger: AAATGCTGAGCGACCACTCCATCCGCTCCTTTGATG...GGATCCCGATTGAGGCCCTGAATGCCCGCCATTCCTCCCTAGGGCAGGAGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGGCTGGAGTGGAATATAAGAGACAGGTCTCCTGCCCTAGGGAGGAATGGCCCTCTGTGCGCGTCTTaGACTCGGCGATTACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AWLEWNIRDRSPALGRNGPLCAS*TRRLQQ Trigger: CTGCTGTAATCGCCGAGTGCAAGACGCGCACAGAGG...GCCATTCCTCCCTAGGGCAGGAGACCTGTCTCTTATATTCCACTCCAGCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCTCCACACGCAGTGCATCATGTGCAATATACATCCCATTACAACCTTGCAGCCGGAGCAGCGCTaGACCTCCACACAGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSLHTQCIMCNIHPITTLQPEQR*TSTQGG Trigger: GCCGCCCTGTGTGGAGGTGCAGCGCTGCTCCGGCTG...CAAGGTTGTAATGGGATGTATATTGCACATGATGCACTGCGTGTGGAGACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR GCA 90 bp | AGTCAAGAGAAGCCTGCAGCCTGGAGTGGAGTCCTTTGCATCTGGAGCTGCAGGTGCGAGGCCCGGCATTaGACATTGCGGTTATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQEKPAAWSGVLCIWSCRCEARH*TLRLLQ Trigger: CTGCAATAACCGCAATGTGCAATGCCGGGCCTCGCA...CCTGCAGCTCCAGATGCAAAGGACTCCACTCCAGGCTGCAGGCTTCTCTTGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGGGTGCCATCAGAGTTCCTCCAGTCTGTGCTCCCTGCCACAGGACTGCAACTACTGTCTCACACTTaGAGGCGAGGTGGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IWVPSEFLQSVLPATGLQLLSHT*RRGGPP Trigger: TGGAGGACCACCTCGCCTGCAAGTGTGAGACAGTAG...TTGCAGTCCTGTGGCAGGGAGCACAGACTGGAGGAACTCTGATGGCACCCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CAA 72 bp | GACCCAGGAAGTGGAGGCAATGGACAGACAACAGGGTaGCTTCCCCAGTACCATGGGCTCATTCTGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPGSGGNGQTTG*LPQYHGLILSF Trigger: GAAGCTCAGAATGAGCCCATGGTACTGGGGAAGCAACCCTGTTGTCTGTCCATTGCCTCCACTTCCTGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR GCA 90 bp | CAGTGCATCATGTGCAATATACATCCCATTACAACCTTGCTCACCCTGCTTGGCGGCGTCTTGGCTCGCTaGTCCCTGGATGTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QCIMCNIHPITTLLTLLGGVLAR*SLDVPG Trigger: TCCTGGGACATCCAGGGAGCAGCGAGCCAAGACGCC...GCCAAGCAGGGTGAGCAAGGTTGTAATGGGATGTATATTGCACATGATGCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| 3UTR CAA 72 bp | CTCTCTCCCCCACTTCCAATCTACTGGCTAGCTTCCTaGAAGGAGCCATCGGGTAGAACCGCAAAAGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSPPLPIYWLAS*KEPSGRTAKDQ Trigger: CTGATCTTTTGCGGTTCTACCCGATGGCTCCTTCAAGGAAGCTAGCCAGTAGATTGGAAGTGGGGGAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGTCTCCACACGCAGTGCATCATGTGCAATATACATCCCATTACAACCTTGTCTGGAACACCTCTGTaGGCGTCTTGCACTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLHTQCIMCNIHPITTLSGTPL*ASCTRR Trigger: TCGCCGAGTGCAAGACGCGCACAGAGGTGTTCCAGA...CAAGGTTGTAATGGGATGTATATTGCACATGATGCACTGCGTGTGGAGACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCCTTTGCATCTGGAGCTGCAGGGCGGGCTGAGGAATCGCTGCTGGTGGAATGGTCACCCGAGCTaGAGGCGTCTTGGCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSPLHLELQGGLRNRCWWNGHPS*RRLGSL Trigger: CAGCGAGCCAAGACGCCTCAAGCTCGGGTGACCATT...CCACCAGCAGCGATTCCTCAGCCCGCCCTGCAGCTCCAGATGCAAAGGACTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCCTCCAGTCTGTGCTCCCTGCCACAGGACTGCAAGGGACCCTAGCCTGGCCCGGCATTGCACATaGCGGTTATTGCAGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RVPPVCAPCHRTARDPSLARHCT*RLLQQP Trigger: CGGCTGCTGCAATAACCGCAATGTGCAATGCCGGGC...CAGGCTAGGGTCCCTTGCAGTCCTGTGGCAGGGAGCACAGACTGGAGGAACTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS TCA 90 bp | CCACACAGGGCGGCCACACCAGGAAGTTGGCGTTGGTGCGATCGATaGGGTTCCGAGAGATCTGGAACACCTCTGTGCGCGTCTTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PHRAATPGSWRWCDR*GSERSGTPLCASCT Trigger: AGTGCAAGACGCGCACAGAGGTGTTCCAGATCTCTCGGAACCTCATCGATCGCACCAACGCCAACTTCCTGGTGTGGCCGCCCTGTGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
||
| CDS-3UTR CAA 90 bp | CGTCCTCCCAAGGGCTCTAGGGCTCTCCCTCTCTCCCCCACTTCCAATCTACTGACCTCTGTGCGCGTCTaGCACTCGGCGATTACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPPKGSRALPLSPTSNLLTSVRV*HSAITA Trigger: TGCTGTAATCGCCGAGTGCAAGACGCGCACAGAGGT...CAGTAGATTGGAAGTGGGGGAGAGAGGGAGAGCCCTAGAGCCCTTGGGAGGACG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR CAA 90 bp | AGGTCTCCTGCCCTAGGGAGGAATGGCGGGCATTCAGGGCCTCAATCGGGATCCACCAGGAAGTTGGCGTaGGTGCGATCGATGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSPALGRNGGHSGPQSGSTRKLA*VRSMRF Trigger: GAACCTCATCGATCGCACCAACGCCAACTTCCTGGT...GGATCCCGATTGAGGCCCTGAATGCCCGCCATTCCTCCCTAGGGCAGGAGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCCTCCAGTCTGTGCTCCCTGCCACAGGACTGCAAGGGACCCTAGCCTGACTACTGTCTCACACTaGCAGGCGAGGTGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVPPVCAPCHRTARDPSLTTVSH*QARWSS Trigger: GGAGGACCACCTCGCCTGCAAGTGTGAGACAGTAGT...CAGGCTAGGGTCCCTTGCAGTCCTGTGGCAGGGAGCACAGACTGGAGGAACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGGGTGCCATCAGAGTTCCTCCAGTCTGTGCTCCCTGCCACAGGACTGCAAGGCCACACCAGGAAGTaGGCGTTGGTGCGATCGATG | + |
|
Preference number: 5 (lower is better) Translates to: IWVPSEFLQSVLPATGLQGHTRK*ALVRSM Trigger: CATCGATCGCACCAACGCCAACTTCCTGGTGTGGCC...TTGCAGTCCTGTGGCAGGGAGCACAGACTGGAGGAACTCTGATGGCACCCAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS CCA 90 bp | ACCAGGAAGTTGGCGTTGGTGCGATCGATGAGGTTCCGAGAGATCTaGAACACCTCTGTGCGCGTCTTGCACTCGGCGATTACAGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRKLALVRSMRFREI*NTSVRVLHSAITAG Trigger: GCCTGCTGTAATCGCCGAGTGCAAGACGCGCACAGAGGTGTTCCAGATCTCTCGGAACCTCATCGATCGCACCAACGCCAACTTCCTGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCTGCCCTAGGGAGGAATGGCGGGCATTCAGGGCCTCAATCGGGATCCGAAGTCACTGTGGCCTTCTaGAAGATGGGCTTCTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SPALGRNGGHSGPQSGSEVTVAF*KMGFFR Trigger: GCGAAAGAAGCCCATCTTCAAGAAGGCCACAGTGAC...TTCGGATCCCGATTGAGGCCCTGAATGCCCGCCATTCCTCCCTAGGGCAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS CCA 90 bp | GTCACAGGCCGAGGGGTCACTACTGTCTCACACTTGCAGGCGAGGTaGTCCTCCAAGGTCACTGTGGCCTTCTTGAAGATGGGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VTGRGVTTVSHLQAR*SSKVTVAFLKMGFF Trigger: AAAGAAGCCCATCTTCAAGAAGGCCACAGTGACCTTGGAGGACCACCTCGCCTGCAAGTGTGAGACAGTAGTGACCCCTCGGCCTGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
||
| CDS GCA 90 bp | TTCTTTCGCACAATCTCAATCTTTCTCACCTGGACCGGCCGCATCTaGACCTGCGAGGCCCGGCATTGCACATTGCGGTTATTGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFRTISIFLTWTGRI*TCEARHCTLRLLQQ Trigger: CTGCTGCAATAACCGCAATGTGCAATGCCGGGCCTCGCAGGTGCAGATGCGGCCGGTCCAGGTGAGAAAGATTGAGATTGTGCGAAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
||
| CDS TCA 90 bp | AGCTCAGCCCCATCTTCATCTACGGAGTCTCTGTGCAGCAGGCGCTaGAGATCATCAAAGGAGCGGATGGAGTGGTCGCTCAGCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSAPSSSTESLCSRR*RSSKERMEWSLSIS Trigger: TGAAATGCTGAGCGACCACTCCATCCGCTCCTTTGATGATCTTCAGCGCCTGCTGCACAGAGACTCCGTAGATGAAGATGGGGCTGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
||
| CDS CCA 90 bp | CGGAGTCTCTGTGCAGCAGGCGCTGAAGATCATCAAAGGAGCGGATaGAGTGGTCGCTCAGCATTTCATACAGTTCCTCAGGAATGGGAT | + |
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Preference number: 5 (lower is better) Translates to: RSLCAAGAEDHQRSG*SGRSAFHTVPQEWD Trigger: ATCCCATTCCTGAGGAACTGTATGAAATGCTGAGCGACCACTCCATCCGCTCCTTTGATGATCTTCAGCGCCTGCTGCACAGAGACTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| CDS-3UTR CAA 90 bp | AGCAGTCTCCACACGCAGTGCATCATGTGCAATATACATCCCATTACAACCTTGTGCACATTGCGGTTATaGCAGCAGCCGGAGCAGCGC | + |
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Preference number: 5 (lower is better) Translates to: SSLHTQCIMCNIHPITTLCTLRL*QQPEQR Trigger: GCGCTGCTCCGGCTGCTGCAATAACCGCAATGTGCA...CAAGGTTGTAATGGGATGTATATTGCACATGATGCACTGCGTGTGGAGACTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| CDS-3UTR CAA 90 bp | GGACCCCATGGGGGCAATACAGCAAATACCATATTAAATAACCCTGCCCACACTTCCTTCAGGGCCGCCTaGTCATGGGTGTGCTTAAAC | + |
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Preference number: 5 (lower is better) Translates to: GPHGGNTANTILNNPAHTSFRAA*SWVCLN Trigger: GTTTAAGCACACCCATGACAAGGCGGCCCTGAAGGA...AGTGTGGGCAGGGTTATTTAATATGGTATTTGCTGTATTGCCCCCATGGGGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| CDS GCA 72 bp | GCACCTGCGAGGCCCGGCATTGCACATTGCGGTTATTaGAGCAGCCGGAGCAGCGCTGCACCTCCACACAGG | + |
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Preference number: 6 (lower is better) Translates to: APARPGIAHCGY*SSRSSAAPPHR Trigger: CCTGTGTGGAGGTGCAGCGCTGCTCCGGCTGCTGCAATAACCGCAATGTGCAATGCCGGGCCTCGCAGGTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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| CDS TCA 72 bp | GCGGCCACACCAGGAAGTTGGCGTTGGTGCGATCGATaGGGTTCCGAGAGATCTGGAACACCTCTGTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: AATPGSWRWCDR*GSERSGTPLCA Trigger: CGCGCACAGAGGTGTTCCAGATCTCTCGGAACCTCATCGATCGCACCAACGCCAACTTCCTGGTGTGGCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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| CDS CAA 72 bp | CTAGTCACAGGCCGAGGGGTCACTACTGTCTCACACTaGCAGGCGAGGTGGTCCTCCAAGGTCACTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LVTGRGVTTVSH*QARWSSKVTVA Trigger: GGCCACAGTGACCTTGGAGGACCACCTCGCCTGCAAGTGTGAGACAGTAGTGACCCCTCGGCCTGTGACTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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| CDS GCA 72 bp | GGTTCCGAGAGATCTGGAACACCTCTGTGCGCGTCTTaGACTCGGCGATTACAGCAGGCTCTGCTGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSERSGTPLCAS*TRRLQQALLLP Trigger: TGGCAGCAGCAGAGCCTGCTGTAATCGCCGAGTGCAAGACGCGCACAGAGGTGTTCCAGATCTCTCGGAACC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000500.8 ENSMUST00000229795.2 ENSMUST00000229912.2 |
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| CDS CAA 72 bp | AGGTTCCGAGAGATCTGGAACACCTCTGTGCGCGTCTaGCACTCGGCGATTACAGCAGGCTCTGCTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RFREIWNTSVRV*HSAITAGSAAA Trigger: GGCAGCAGCAGAGCCTGCTGTAATCGCCGAGTGCAAGACGCGCACAGAGGTGTTCCAGATCTCTCGGAACCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000500.8 ENSMUST00000229795.2 ENSMUST00000229912.2 |
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| CDS CAA 90 bp | CCAGGACTTCTAGTCACAGGCCGAGGGGTCACTACTGTCTCACACTaGCAGGCGAGGTGGTCCTCCAAGGTCACTGTGGCCTTCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGLLVTGRGVTTVSH*QARWSSKVTVAFLK Trigger: CTTCAAGAAGGCCACAGTGACCTTGGAGGACCACCTCGCCTGCAAGTGTGAGACAGTAGTGACCCCTCGGCCTGTGACTAGAAGTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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| CDS GCA 72 bp | TCAATCTTTCTCACCTGGACCGGCCGCATCTGCACCTaGGAGGCCCGGCATTGCACATTGCGGTTATTGCAG | + |
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Preference number: 6 (lower is better) Translates to: SIFLTWTGRICT*EARHCTLRLLQ Trigger: CTGCAATAACCGCAATGTGCAATGCCGGGCCTCGCAGGTGCAGATGCGGCCGGTCCAGGTGAGAAAGATTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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| CDS GCA 72 bp | ACAATCTCAATCTTTCTCACCTGGACCGGCCGCATCTaGACCTGCGAGGCCCGGCATTGCACATTGCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: TISIFLTWTGRI*TCEARHCTLRL Trigger: TAACCGCAATGTGCAATGCCGGGCCTCGCAGGTGCAGATGCGGCCGGTCCAGGTGAGAAAGATTGAGATTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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| CDS CCA 72 bp | TTGGCGTTGGTGCGATCGATGAGGTTCCGAGAGATCTaGAACACCTCTGTGCGCGTCTTGCACTCGGCGATT | + |
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Preference number: 6 (lower is better) Translates to: LALVRSMRFREI*NTSVRVLHSAI Trigger: AATCGCCGAGTGCAAGACGCGCACAGAGGTGTTCCAGATCTCTCGGAACCTCATCGATCGCACCAACGCCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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| CDS CCA 72 bp | CGAGGGGTCACTACTGTCTCACACTTGCAGGCGAGGTaGTCCTCCAAGGTCACTGTGGCCTTCTTGAAGATG | + |
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Preference number: 6 (lower is better) Translates to: RGVTTVSHLQAR*SSKVTVAFLKM Trigger: CATCTTCAAGAAGGCCACAGTGACCTTGGAGGACCACCTCGCCTGCAAGTGTGAGACAGTAGTGACCCCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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| CDS TCA 72 bp | CCATCTTCATCTACGGAGTCTCTGTGCAGCAGGCGCTaGAGATCATCAAAGGAGCGGATGGAGTGGTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: PSSSTESLCSRR*RSSKERMEWSL Trigger: GAGCGACCACTCCATCCGCTCCTTTGATGATCTTCAGCGCCTGCTGCACAGAGACTCCGTAGATGAAGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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| CDS CCA 72 bp | TGTGCAGCAGGCGCTGAAGATCATCAAAGGAGCGGATaGAGTGGTCGCTCAGCATTTCATACAGTTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: CAAGAEDHQRSG*SGRSAFHTVPQ Trigger: CTGAGGAACTGTATGAAATGCTGAGCGACCACTCCATCCGCTCCTTTGATGATCTTCAGCGCCTGCTGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000500.8 |
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| CDS CAA 90 bp | TCACACTTGCAGGCGAGGTGGTCCTCCAAGGTCACTGTGGCCTTCTaGAAGATGGGCTTCTTTCGCACAATCTCAATCTTTCTCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: SHLQARWSSKVTVAF*KMGFFRTISIFLTW Trigger: CCAGGTGAGAAAGATTGAGATTGTGCGAAAGAAGCCCATCTTCAAGAAGGCCACAGTGACCTTGGAGGACCACCTCGCCTGCAAGTGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000000500.8 ENSMUST00000229912.2 |
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