Pregenerated sensors for PDGFA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025856Ensembl transcript IDs: ENSMUST00000046901.14, ENSMUST00000076095.14, ENSMUST00000110896.2, ENSMUST00000110897.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACGGAGCTGGCAGGCAGCATCCCAGGCGGGCTCCAGGCGTCCTTaGCGAAAAGCACCTGTGCCCACGGGCAGAATCCAGGGTGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: PRSWQAASQAGSRRP*RKAPVPTGRIQGGG Trigger: GCCACCACCCTGGATTCTGCCCGTGGGCACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATGCTGCCTGCCAGCTCCGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR CCA 90 bp | TCCTTGGCGAAAAGCACCTGTGCCCACGGGCAGAATCCAGGGTGGTaGCCAACATCAGCCACCTCTCGAGGGTCAGTCCTGCAGGGCGGC | + |
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Preference number: 1 (lower is better) Translates to: SLAKSTCAHGQNPGW*PTSATSRGSVLQGG Trigger: GCCGCCCTGCAGGACTGACCCTCGAGAGGTGGCTGATGTTGGCCACCACCCTGGATTCTGCCCGTGGGCACAGGTGCTTTTCGCCAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR TCA 90 bp | ACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGCAATaGAGCACCATACATAGTATGTTCAGGAATGTCACACGCCACGCA | + |
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Preference number: 1 (lower is better) Translates to: TVFHGGEQRPHAHWQ*STIHSMFRNVTRHA Trigger: TGCGTGGCGTGTGACATTCCTGAACATACTATGTATGGTGCTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| 3UTR CAA 90 bp | CCCACGGAGCTGGCAGGCAGCATCCCAGGCGGGCTCCAGGCGTCCTaGGCGAAAAGCACCTGTGCCCACGGGCAGAATCCAGGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PTELAGSIPGGLQAS*AKSTCAHGQNPGWW Trigger: CCACCACCCTGGATTCTGCCCGTGGGCACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATGCTGCCTGCCAGCTCCGTGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR-3UTR TCA 90 bp | CTGGCAGGCAGCATCCCAGGCGGGCTCCAGGCGTCCTTGGCGAAAAGCACCTGTGCTTTGATGTCACACTaGACAAACGGACACTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: LAGSIPGGLQASLAKSTCALMSH*TNGHCL Trigger: GAGACAGTGTCCGTTTGTTCAGTGTGACATCAAAGC...ACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATGCTGCCTGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR-3UTR TCA 90 bp | CCCACCTGTTCAGTTCCCACGGAGCTGGCAGGCAGCATCCCAGGCGGGCTCCAGCTACAGTACTTGCTTTaGTGTCACACTGAACAAACG | + |
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Preference number: 2 (lower is better) Translates to: PTCSVPTELAGSIPGGLQLQYLL*CHTEQT Trigger: CGTTTGTTCAGTGTGACATCAAAGCAAGTACTGTAG...CTGGAGCCCGCCTGGGATGCTGCCTGCCAGCTCCGTGGGAACTGAACAGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR-3UTR GCA 90 bp | CTGGCAGGCAGCATCCCAGGCGGGCTCCAGGCGTCCTTGGCGAAAAGCACCTGTCACTGTCTCTCTGAGTaGTACAGTACTTGCTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: LAGSIPGGLQASLAKSTCHCLSE*YSTCFD Trigger: ATCAAAGCAAGTACTGTAGCACTCAGAGAGACAGTG...ACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATGCTGCCTGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR CCA 72 bp | TGGCAGGCAGCATCCCAGGCGGGCTCCAGGCGTCCTTaGCGAAAAGCACCTGTGCCCACGGGCAGAATCCAG | + |
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Preference number: 3 (lower is better) Translates to: WQAASQAGSRRP*RKAPVPTGRIQ Trigger: CTGGATTCTGCCCGTGGGCACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATGCTGCCTGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR CCA 72 bp | GGCCATCAGGAAGGTCCTAGGCAGACTCAAGCGAGGTaGTGGCTTCCAGGCCGTGGGCATCTCCCACCTGTT | + |
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Preference number: 3 (lower is better) Translates to: GHQEGPRQTQAR*WLPGRGHLPPV Trigger: AACAGGTGGGAGATGCCCACGGCCTGGAAGCCACCACCTCGCTTGAGTCTGCCTAGGACCTTCCTGATGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR CCA 72 bp | AAAAGCACCTGTGCCCACGGGCAGAATCCAGGGTGGTaGCCAACATCAGCCACCTCTCGAGGGTCAGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: KSTCAHGQNPGW*PTSATSRGSVL Trigger: CAGGACTGACCCTCGAGAGGTGGCTGATGTTGGCCACCACCCTGGATTCTGCCCGTGGGCACAGGTGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR CCA 72 bp | CATCAGGAAGGTCCTAGGCAGACTCAAGCGAGGTGGTaGCTTCCAGGCCGTGGGCATCTCCCACCTGTTCAG | + |
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Preference number: 3 (lower is better) Translates to: HQEGPRQTQARW*LPGRGHLPPVQ Trigger: CTGAACAGGTGGGAGATGCCCACGGCCTGGAAGCCACCACCTCGCTTGAGTCTGCCTAGGACCTTCCTGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| 3UTR GCA 72 bp | ACAGCTTACTATAAAATAATCTCTGTCATGTCTCCATaGTGCCATAGAAGCCATTTAGCAATGGGGAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: TAYYKIISVMSP*CHRSHLAMGRG Trigger: CCCCCTCCCCATTGCTAAATGGCTTCTATGGCAGCATGGAGACATGACAGAGATTATTTTATAGTAAGCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000076095.14 |
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| CDS-3UTR TCA 90 bp | CCCACCTGTTCAGTTCCCACGGAGCTGGCAGGCAGCATCCCAGGCGGGCTCCAGGCGGTGGTGGACCCGTaGAGGCTGGCACTTGACGCT | + |
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Preference number: 4 (lower is better) Translates to: PTCSVPTELAGSIPGGLQAVVDP*RLALDA Trigger: AGCGTCAAGTGCCAGCCTTCACGGGTCCACCACCGC...CTGGAGCCCGCCTGGGATGCTGCCTGCCAGCTCCGTGGGAACTGAACAGGTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR CCA 90 bp | CAGCATCCCAGGCGGGCTCCAGGCGTCCTTGGCGAAAAGCACCTGTGCCCACGGTTCTCTTCCTGCGAATaGGCACAGGCCGCTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: QHPRRAPGVLGEKHLCPRFSSCE*AQAASR Trigger: CCGAGAAGCGGCCTGTGCCCATTCGCAGGAAGAGAA...CCGTGGGCACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR GCA 90 bp | CTGGCAGGCAGCATCCCAGGCGGGCTCCAGGCGTCCTTGGCGAAAAGCACCTGTGCTGGAGGTCCCGGATaGTGTGGATCTGACTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: LAGSIPGGLQASLAKSTCAGGPG*CGSDFE Trigger: CTCGAAGTCAGATCCACAGCATCCGGGACCTCCAGC...ACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATGCTGCCTGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR CCA 90 bp | GCAGCATCCCAGGCGGGCTCCAGGCGTCCTTGGCGAAAAGCACCTGTGCCCACGCGCTTCTCGGGCACATaGTTAATGGCATGGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: AASQAGSRRPWRKAPVPTRFSGT*LMAWDP Trigger: TGGGTCCCATGCCATTAACCATGTGCCCGAGAAGCG...CGTGGGCACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR GCA 90 bp | CATCCCAGGCGGGCTCCAGGCGTCCTTGGCGAAAAGCACCTGTGCCCACGGGCATGTTACAACAGCCAGTaGAGCGCTTCACCTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: HPRRAPGVLGEKHLCPRACYNSQ*SASPPH Trigger: GTGTGGAGGTGAAGCGCTGCACTGGCTGTTGTAACA...TGCCCGTGGGCACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR CCA 90 bp | TCCCACCTGTTCAGTTCCCACGGAGCTGGCAGGCAGCATCCCAGGCGGGCTCCACGCTTCTCGGGCACATaGTTAATGGCATGGGACCCA | + |
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Preference number: 4 (lower is better) Translates to: SHLFSSHGAGRQHPRRAPRFSGT*LMAWDP Trigger: TGGGTCCCATGCCATTAACCATGTGCCCGAGAAGCG...TGGAGCCCGCCTGGGATGCTGCCTGCCAGCTCCGTGGGAACTGAACAGGTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR CCA 90 bp | CTGGCAGGCAGCATCCCAGGCGGGCTCCAGGCGTCCTTGGCGAAAAGCACCTGTACATGGTTAATGGCATaGGACCCATGGGCTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LAGSIPGGLQASLAKSTCTWLMA*DPWALR Trigger: TCTGAGAGCCCATGGGTCCCATGCCATTAACCATGT...ACAGGTGCTTTTCGCCAAGGACGCCTGGAGCCCGCCTGGGATGCTGCCTGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR CCA 90 bp | AGTATGTTCAGGAATGTCACACGCCACGCACATCCGTGTCCCGGGAGAGGGCGGTTCTCTTCCTGCGAATaGGCACAGGCCGCTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: SMFRNVTRHAHPCPGRGRFSSCE*AQAASR Trigger: CCGAGAAGCGGCCTGTGCCCATTCGCAGGAAGAGAA...CCGCCCTCTCCCGGGACACGGATGTGCGTGGCGTGTGACATTCCTGAACATACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | TTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGGCGGTGGTGGACCCGTaGAGGCTGGCACTTGACGCT | + |
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Preference number: 4 (lower is better) Translates to: LSSDTVFHGGEQRPHAHWAVVDP*RLALDA Trigger: AGCGTCAAGTGCCAGCCTTCACGGGTCCACCACCGC...CCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | TCCCACCTGTTCAGTTCCCACGGAGCTGGCAGGCAGCATCCCAGGCGGGCTCCAATTTTGGCTTCTTCCTaGCATACTCCACTTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SHLFSSHGAGRQHPRRAPILASS*HTPLWP Trigger: TGGCCAAAGTGGAGTATGTCAGGAAGAAGCCAAAAT...TGGAGCCCGCCTGGGATGCTGCCTGCCAGCTCCGTGGGAACTGAACAGGTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR GCA 90 bp | ATGTTCAGGAATGTCACACGCCACGCACATCCGTGTCCCGGGAGAGGGCGGCCGCCTGGTCTTGCAAACTaGAGGAATGGCTTCCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: MFRNVTRHAHPCPGRGRPPGLAN*RNGFLN Trigger: ATTGAGGAAGCCATTCCTGCAGTTTGCAAGACCAGG...CGGCCGCCCTCTCCCGGGACACGGATGTGCGTGGCGTGTGACATTCCTGAACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | AGGCAGACTCAAGCGAGGTGGTGGCTTCCAGGCCGTGGGCATCTCCCACCTGTTACATGGTTAATGGCATaGGACCCATGGGCTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: RQTQARWWLPGRGHLPPVTWLMA*DPWALR Trigger: TCTGAGAGCCCATGGGTCCCATGCCATTAACCATGT...AACAGGTGGGAGATGCCCACGGCCTGGAAGCCACCACCTCGCTTGAGTCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR TCA 90 bp | ATACATAGTATGTTCAGGAATGTCACACGCCACGCACATCCGTGTCCCGGGAGACGGATGCTGTGGATCTaGCTTCGAGCCAGCCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: IHSMFRNVTRHAHPCPGRRMLWI*LRASRS Trigger: CGAGCGGCTGGCTCGAAGTCAGATCCACAGCATCCG...TCTCCCGGGACACGGATGTGCGTGGCGTGTGACATTCCTGAACATACTATGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | GGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGCAATGAAGGCGGTGGTGGACCCGTaGAGGCTGGCACTTGACGCT | + |
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Preference number: 4 (lower is better) Translates to: GHSFSRRRTKTARTLAMKAVVDP*RLALDA Trigger: AGCGTCAAGTGCCAGCCTTCACGGGTCCACCACCGC...CTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | TCGCTCTCTGTGACAAGGAAGCTTTCTCACTGTCTCTCTGAGTGCTACAGTACTTCCTCGGCCAGGGCATaGGCGAGGTATCCGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SLSVTRKLSHCLSECYSTSSARA*ARYPQP Trigger: CGGCTGCGGATACCTCGCCCATGCCCTGGCCGAGGA...AGTACTGTAGCACTCAGAGAGACAGTGAGAAAGCTTCCTTGTCACAGAGAGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | AGTATGTTCAGGAATGTCACACGCCACGCACATCCGTGTCCCGGGAGAGGGCGGACATGGTTAATGGCATaGGACCCATGGGCTCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SMFRNVTRHAHPCPGRGRTWLMA*DPWALR Trigger: TCTGAGAGCCCATGGGTCCCATGCCATTAACCATGT...CCGCCCTCTCCCGGGACACGGATGTGCGTGGCGTGTGACATTCCTGAACATACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | AATGAAGCACCATACATAGTATGTTCAGGAATGTCACACGCCACGCACATCCGTTCCTCGGCCAGGGCATaGGCGAGGTATCCGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: NEAPYIVCSGMSHATHIRSSARA*ARYPQP Trigger: CGGCTGCGGATACCTCGCCCATGCCCTGGCCGAGGA...ACGGATGTGCGTGGCGTGTGACATTCCTGAACATACTATGTATGGTGCTTCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | TTTTCGCTCTCTGTGACAAGGAAGCTTTCTCACTGTCTCTCTGAGTGCTACAGTTCCTCGGCCAGGGCATaGGCGAGGTATCCGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: FSLSVTRKLSHCLSECYSSSARA*ARYPQP Trigger: CGGCTGCGGATACCTCGCCCATGCCCTGGCCGAGGA...ACTGTAGCACTCAGAGAGACAGTGAGAAAGCTTCCTTGTCACAGAGAGCGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | GCACCATACATAGTATGTTCAGGAATGTCACACGCCACGCACATCCGTGTCCCGTTCTCTTCCTGCGAATaGGCACAGGCCGCTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: APYIVCSGMSHATHIRVPFSSCE*AQAASR Trigger: CCGAGAAGCGGCCTGTGCCCATTCGCAGGAAGAGAA...CGGGACACGGATGTGCGTGGCGTGTGACATTCCTGAACATACTATGTATGGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | AACGGACACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGCGGATGCTGTGGATCTaGCTTCGAGCCAGCCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: NGHCLFVLGHSFSRRRTKRMLWI*LRASRS Trigger: CGAGCGGCTGGCTCGAAGTCAGATCCACAGCATCCG...CTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGTGTCCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | CCTCGGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGCAATGCTGGAGGTCCCGGATaGTGTGGATCTGACTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: PRTQFFTEENKDRTHIGNAGGPG*CGSDFE Trigger: CTCGAAGTCAGATCCACAGCATCCGGGACCTCCAGC...ATTGCCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | GAGAACAAAGACCGCACGCACATTGGCAATGAAGCACCATACATAGTATGTTCATCCTCGGCCAGGGCATaGGCGAGGTATCCGCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: ENKDRTHIGNEAPYIVCSSSARA*ARYPQP Trigger: CGGCTGCGGATACCTCGCCCATGCCCTGGCCGAGGA...TGAACATACTATGTATGGTGCTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | GAGGAGAACAAAGACCGCACGCACATTGGCAATGAAGCACCATACATAGTATGTCGGATGCTGTGGATCTaGCTTCGAGCCAGCCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: EENKDRTHIGNEAPYIVCRMLWI*LRASRS Trigger: CGAGCGGCTGGCTCGAAGTCAGATCCACAGCATCCG...ACATACTATGTATGGTGCTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | ACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCTGGAGGTCCCGGATaGTGTGGATCTGACTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: TVSLSSDTVFHGGEQRPHAGGPG*CGSDFE Trigger: CTCGAAGTCAGATCCACAGCATCCGGGACCTCCAGC...GTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | TCTGAGTGCTACAGTACTTGCTTTGATGTCACACTGAACAAACGGACACTGTCTCGGATGCTGTGGATCTaGCTTCGAGCCAGCCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SECYSTCFDVTLNKRTLSRMLWI*LRASRS Trigger: CGAGCGGCTGGCTCGAAGTCAGATCCACAGCATCCG...AGACAGTGTCCGTTTGTTCAGTGTGACATCAAAGCAAGTACTGTAGCACTCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | TGCTACAGTACTTGCTTTGATGTCACACTGAACAAACGGACACTGTCTCTTTGTGCGGTGGTGGACCCGTaGAGGCTGGCACTTGACGCT | + |
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Preference number: 4 (lower is better) Translates to: CYSTCFDVTLNKRTLSLCAVVDP*RLALDA Trigger: AGCGTCAAGTGCCAGCCTTCACGGGTCCACCACCGC...ACAAAGAGACAGTGTCCGTTTGTTCAGTGTGACATCAAAGCAAGTACTGTAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | TCGCTCTCTGTGACAAGGAAGCTTTCTCACTGTCTCTCTGAGTGCTACAGTACTGCTGGAGGTCCCGGATaGTGTGGATCTGACTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: SLSVTRKLSHCLSECYSTAGGPG*CGSDFE Trigger: CTCGAAGTCAGATCCACAGCATCCGGGACCTCCAGC...AGTACTGTAGCACTCAGAGAGACAGTGAGAAAGCTTCCTTGTCACAGAGAGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | TCGCTCTCTGTGACAAGGAAGCTTTCTCACTGTCTCTCTGAGTGCTACAGTACTATCTCCAAGAGTCGCTaGAGGTCCCGGATGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SLSVTRKLSHCLSECYSTISKSR*RSRMLW Trigger: CCACAGCATCCGGGACCTCCAGCGACTCTTGGAGAT...AGTACTGTAGCACTCAGAGAGACAGTGAGAAAGCTTCCTTGTCACAGAGAGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | ACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGCAATGAAGCATTCTCTTCCTGCGAATaGGCACAGGCCGCTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: TQFFTEENKDRTHIGNEAFSSCE*AQAASR Trigger: CCGAGAAGCGGCCTGTGCCCATTCGCAGGAAGAGAA...TGCTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | GGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGCAATGAAGCAATACTTCTCTTCCTaGGAATGGGCACAGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GHSFSRRRTKTARTLAMKQYFSS*EWAQAA Trigger: AGCGGCCTGTGCCCATTCGCAGGAAGAGAAGTATTG...CTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | GCACCATACATAGTATGTTCAGGAATGTCACACGCCACGCACATCCGTGTCCCGCCTGGTCTTGCAAACTaGAGGAATGGCTTCCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: APYIVCSGMSHATHIRVPPGLAN*RNGFLN Trigger: ATTGAGGAAGCCATTCCTGCAGTTTGCAAGACCAGG...CGGGACACGGATGTGCGTGGCGTGTGACATTCCTGAACATACTATGTATGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | GGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGCAATGAAGTGTTACAACAGCCAGTaGAGCGCTTCACCTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: GHSFSRRRTKTARTLAMKCYNSQ*SASPPH Trigger: GTGTGGAGGTGAAGCGCTGCACTGGCTGTTGTAACA...CTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | ACGGACACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGAATGGCATGGGACCCATaGGCTCTCAGACTTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: TDTVSLSSDTVFHGGEQRMAWDP*ALRLVS Trigger: GGAGACAAGTCTGAGAGCCCATGGGTCCCATGCCAT...TCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGTGTCCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | CTCTCTGTGACAAGGAAGCTTTCTCACTGTCTCTCTGAGTGCTACAGTACTTGCATGGCATGGGACCCATaGGCTCTCAGACTTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSVTRKLSHCLSECYSTCMAWDP*ALRLVS Trigger: GGAGACAAGTCTGAGAGCCCATGGGTCCCATGCCAT...GCAAGTACTGTAGCACTCAGAGAGACAGTGAGAAAGCTTCCTTGTCACAGAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | TTCACGGAGGAGAACAAAGACCGCACGCACATTGGCAATGAAGCACCATACATATGTTACAACAGCCAGTaGAGCGCTTCACCTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: FTEENKDRTHIGNEAPYICYNSQ*SASPPH Trigger: GTGTGGAGGTGAAGCGCTGCACTGGCTGTTGTAACA...TATGTATGGTGCTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | CAAACGGACACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAATGTTACAACAGCCAGTaGAGCGCTTCACCTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: QTDTVSLSSDTVFHGGEQCYNSQ*SASPPH Trigger: GTGTGGAGGTGAAGCGCTGCACTGGCTGTTGTAACA...TTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGTGTCCGTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | TTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGACATGGTTAATGGCATaGGACCCATGGGCTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVLGHSFSRRRTKTARTLTWLMA*DPWALR Trigger: TCTGAGAGCCCATGGGTCCCATGCCATTAACCATGT...CAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGAACAAAGACCGCACGCACATTGGCAATGAAGCACCATACATAGTATGTCGCTTCTCGGGCACATaGTTAATGGCATGGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: EENKDRTHIGNEAPYIVCRFSGT*LMAWDP Trigger: TGGGTCCCATGCCATTAACCATGTGCCCGAGAAGCG...ACATACTATGTATGGTGCTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | TGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGCTCCTCTAACCTCACCTaGACCTCTTTCAATTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPRTQFFTEENKDRTHIGSSNLT*TSFNFG Trigger: GCCAAAATTGAAAGAGGTCCAGGTGAGGTTAGAGGA...GCCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | ATACATAGTATGTTCAGGAATGTCACACGCCACGCACATCCGTGTCCCGGGAGAATTTTGGCTTCTTCCTaGCATACTCCACTTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IHSMFRNVTRHAHPCPGRILASS*HTPLWP Trigger: TGGCCAAAGTGGAGTATGTCAGGAAGAAGCCAAAAT...TCTCCCGGGACACGGATGTGCGTGGCGTGTGACATTCCTGAACATACTATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | GTGACAAGGAAGCTTTCTCACTGTCTCTCTGAGTGCTACAGTACTTGCTTTGATATGGCATGGGACCCATaGGCTCTCAGACTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTRKLSHCLSECYSTCFDMAWDP*ALRLVS Trigger: GGAGACAAGTCTGAGAGCCCATGGGTCCCATGCCAT...ATCAAAGCAAGTACTGTAGCACTCAGAGAGACAGTGAGAAAGCTTCCTTGTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | CAAGGAAGCTTTCTCACTGTCTCTCTGAGTGCTACAGTACTTGCTTTGATGTCACGCTTCTCGGGCACATaGTTAATGGCATGGGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSFLTVSLSATVLALMSRFSGT*LMAWDP Trigger: TGGGTCCCATGCCATTAACCATGTGCCCGAGAAGCG...TGACATCAAAGCAAGTACTGTAGCACTCAGAGAGACAGTGAGAAAGCTTCCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | AACGGACACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGCCTGGTCTTGCAAACTaGAGGAATGGCTTCCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: NGHCLFVLGHSFSRRRTKPGLAN*RNGFLN Trigger: ATTGAGGAAGCCATTCCTGCAGTTTGCAAGACCAGG...CTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGTGTCCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR GCA 90 bp | ACTGAACAAACGGACACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGACCTGGTCTTGCAAACTaGAGGAATGGCTTCCTCAAT | + |
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Preference number: 4 (lower is better) Translates to: TEQTDTVSLSSDTVFHGGPGLAN*RNGFLN Trigger: ATTGAGGAAGCCATTCCTGCAGTTTGCAAGACCAGG...TCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGTGTCCGTTTGTTCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | TACAGTACTTGCTTTGATGTCACACTGAACAAACGGACACTGTCTCTTTGTCCTATGGCATGGGACCCATaGGCTCTCAGACTTGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: YSTCFDVTLNKRTLSLCPMAWDP*ALRLVS Trigger: GGAGACAAGTCTGAGAGCCCATGGGTCCCATGCCAT...AGGACAAAGAGACAGTGTCCGTTTGTTCAGTGTGACATCAAAGCAAGTACTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | TTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGTGCAAACTGCAGGAATaGCTTCCTCAATACTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSDTVFHGGEQRPHAHWCKLQE*LPQYFS Trigger: AGAGAAGTATTGAGGAAGCCATTCCTGCAGTTTGCA...CCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | CAAACGGACACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAATTTTGGCTTCTTCCTaGCATACTCCACTTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTDTVSLSSDTVFHGGEQILASS*HTPLWP Trigger: TGGCCAAAGTGGAGTATGTCAGGAAGAAGCCAAAAT...TTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGTGTCCGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | AACAAACGGACACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACTCCTCTAACCTCACCTaGACCTCTTTCAATTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: NKRTLSLCPRTQFFTEENSSNLT*TSFNFG Trigger: GCCAAAATTGAAAGAGGTCCAGGTGAGGTTAGAGGA...GTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGTGTCCGTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | AAACGGACACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAATCCTCTAACCTCACCTaGACCTCTTTCAATTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: KRTLSLCPRTQFFTEENKSSNLT*TSFNFG Trigger: GCCAAAATTGAAAGAGGTCCAGGTGAGGTTAGAGGA...TTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGTGTCCGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | TGCTACAGTACTTGCTTTGATGTCACACTGAACAAACGGACACTGTCTCTTTGTGAGGTATCTCGTAAATaGCCGTCCTGGTCTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: CYSTCFDVTLNKRTLSLCEVSRK*PSWSCK Trigger: TTTGCAAGACCAGGACGGTCATTTACGAGATACCTC...ACAAAGAGACAGTGTCCGTTTGTTCAGTGTGACATCAAAGCAAGTACTGTAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR TCA 90 bp | AAAGACCGCACGCACATTGGCAATGAAGCACCATACATAGTATGTTCAGGAATGATTTTGGCTTCTTCCTaGCATACTCCACTTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KDRTHIGNEAPYIVCSGMILASS*HTPLWP Trigger: TGGCCAAAGTGGAGTATGTCAGGAAGAAGCCAAAAT...CATTCCTGAACATACTATGTATGGTGCTTCATTGCCAATGTGCGTGCGGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | GAGAACAAAGACCGCACGCACATTGGCAATGAAGCACCATACATAGTATGTTCATGCAAACTGCAGGAATaGCTTCCTCAATACTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ENKDRTHIGNEAPYIVCSCKLQE*LPQYFS Trigger: AGAGAAGTATTGAGGAAGCCATTCCTGCAGTTTGCA...TGAACATACTATGTATGGTGCTTCATTGCCAATGTGCGTGCGGTCTTTGTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CCA 90 bp | AATATGATTCCCAGAGTCCCCTCATGTCTTAAGCTAGAAGAAACGTTAAAGGGGTCCTCTAACCTCACCTaGACCTCTTTCAATTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: NMIPRVPSCLKLEETLKGSSNLT*TSFNFG Trigger: GCCAAAATTGAAAGAGGTCCAGGTGAGGTTAGAGGA...CCCCTTTAACGTTTCTTCTAGCTTAAGACATGAGGGGACTCTGGGAATCATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000076095.14 |
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| CDS-3UTR CCA 90 bp | TGCTACAGTACTTGCTTTGATGTCACACTGAACAAACGGACACTGTCTCTTTGTTGCAAACTGCAGGAATaGCTTCCTCAATACTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CYSTCFDVTLNKRTLSLCCKLQE*LPQYFS Trigger: AGAGAAGTATTGAGGAAGCCATTCCTGCAGTTTGCA...ACAAAGAGACAGTGTCCGTTTGTTCAGTGTGACATCAAAGCAAGTACTGTAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS GCA 90 bp | CAGCCCCTACGGAGTCTATCTCCAAGAGTCGCTGGAGGTCCCGGATaGTGTGGATCTGACTTCGAGCCAGCCGCTCGATCAACTCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: QPLRSLSPRVAGGPG*CGSDFEPAARSTPG Trigger: CCCGGGAGTTGATCGAGCGGCTGGCTCGAAGTCAGATCCACAGCATCCGGGACCTCCAGCGACTCTTGGAGATAGACTCCGTAGGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS CCA 90 bp | GGCACAGGCCGCTTCTCGGGCACATGGTTAATGGCATGGGACCCATaGGCTCTCAGACTTGTCTCCAAGGCATCCTCAGCCCCTACGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GTGRFSGTWLMAWDP*ALRLVSKASSAPTE Trigger: CTCCGTAGGGGCTGAGGATGCCTTGGAGACAAGTCTGAGAGCCCATGGGTCCCATGCCATTAACCATGTGCCCGAGAAGCGGCCTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS TCA 90 bp | GAGTCTATCTCCAAGAGTCGCTGGAGGTCCCGGATGCTGTGGATCTaGCTTCGAGCCAGCCGCTCGATCAACTCCCGGGGTATCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESISKSRWRSRMLWI*LRASRSINSRGISA Trigger: AGCCGAGATACCCCGGGAGTTGATCGAGCGGCTGGCTCGAAGTCAGATCCACAGCATCCGGGACCTCCAGCGACTCTTGGAGATAGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS CCA 90 bp | CTGCGAATGGGCACAGGCCGCTTCTCGGGCACATGGTTAATGGCATaGGACCCATGGGCTCTCAGACTTGTCTCCAAGGCATCCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRMGTGRFSGTWLMA*DPWALRLVSKASSA Trigger: GGCTGAGGATGCCTTGGAGACAAGTCTGAGAGCCCATGGGTCCCATGCCATTAACCATGTGCCCGAGAAGCGGCCTGTGCCCATTCGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CAA 90 bp | ATGTTCAGGAATGTCACACGCCACGCACATCCGTGTCCCGGGAGAGGGCGGCCGATGACCGTCCTGGTCTaGCAAACTGCAGGAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MFRNVTRHAHPCPGRGRPMTVLV*QTAGMA Trigger: AGCCATTCCTGCAGTTTGCAAGACCAGGACGGTCAT...CGGCCGCCCTCTCCCGGGACACGGATGTGCGTGGCGTGTGACATTCCTGAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CAA 90 bp | GCAGACTCAAGCGAGGTGGTGGCTTCCAGGCCGTGGGCATCTCCCACCTGTTCAATGACCGTCCTGGTCTaGCAAACTGCAGGAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ADSSEVVASRPWASPTCSMTVLV*QTAGMA Trigger: AGCCATTCCTGCAGTTTGCAAGACCAGGACGGTCAT...TGAACAGGTGGGAGATGCCCACGGCCTGGAAGCCACCACCTCGCTTGAGTCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 |
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| CDS-3UTR CAA 90 bp | GTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGACCGCACGCACATTGGCATCCACTTTGGCCACCTaGACACTGCGGTGGTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VLGHSFSRRRTKTARTLASTLAT*TLRWWT Trigger: GGTCCACCACCGCAGTGTCAAGGTGGCCAAAGTGGA...TGCCAATGTGCGTGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS CCA 90 bp | ATACTTCTCTTCCTGCGAATGGGCACAGGCCGCTTCTCGGGCACATaGTTAATGGCATGGGACCCATGGGCTCTCAGACTTGTCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLFLRMGTGRFSGT*LMAWDPWALRLVSK Trigger: CTTGGAGACAAGTCTGAGAGCCCATGGGTCCCATGCCATTAACCATGTGCCCGAGAAGCGGCCTGTGCCCATTCGCAGGAAGAGAAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS TCA 90 bp | AGTTGGCCGATGTGGGGTCCACCTGGCTCCGAGGTATCTCGTAAATaGCCGTCCTGGTCTTGCAAACTGCAGGAATGGCTTCCTCAATAC | + |
|
Preference number: 5 (lower is better) Translates to: SWPMWGPPGSEVSRK*PSWSCKLQEWLPQY Trigger: GTATTGAGGAAGCCATTCCTGCAGTTTGCAAGACCAGGACGGTCATTTACGAGATACCTCGGAGCCAGGTGGACCCCACATCGGCCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS GCA 90 bp | CTGGCTCCGAGGTATCTCGTAAATGACCGTCCTGGTCTTGCAAACTaGAGGAATGGCTTCCTCAATACTTCTCTTCCTGCGAATGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAPRYLVNDRPGLAN*RNGFLNTSLPANGH Trigger: GTGCCCATTCGCAGGAAGAGAAGTATTGAGGAAGCCATTCCTGCAGTTTGCAAGACCAGGACGGTCATTTACGAGATACCTCGGAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CAA 90 bp | CACTGTCTCTTTGTCCTCGGACACAGTTTTTCACGGAGGAGAACAAAGACCGCAATGACCGTCCTGGTCTaGCAAACTGCAGGAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HCLFVLGHSFSRRRTKTAMTVLV*QTAGMA Trigger: AGCCATTCCTGCAGTTTGCAAGACCAGGACGGTCAT...TGCGGTCTTTGTTCTCCTCCGTGAAAAACTGTGTCCGAGGACAAAGAGACAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS CCA 90 bp | TTGGAGGTCGCACATGCACACTCCAGGTGTTCCTCTAACCTCACCTaGACCTCTTTCAATTTTGGCTTCTTCCTGACATACTCCACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LEVAHAHSRCSSNLT*TSFNFGFFLTYSTL Trigger: CAAAGTGGAGTATGTCAGGAAGAAGCCAAAATTGAAAGAGGTCCAGGTGAGGTTAGAGGAACACCTGGAGTGTGCATGTGCGACCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS-3UTR CAA 90 bp | AAACAAGGAAACCACACACACACAATTCTGATTAACAGTGAAGCCCAACAGCTTATGACCGTCCTGGTCTaGCAAACTGCAGGAATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KQGNHTHTILINSEAQQLMTVLV*QTAGMA Trigger: AGCCATTCCTGCAGTTTGCAAGACCAGGACGGTCAT...AAGCTGTTGGGCTTCACTGTTAATCAGAATTGTGTGTGTGTGGTTTCCTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076095.14 |
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| CDS CCA 72 bp | AACTCCCGGGGTATCTCGGCTTCCTCGGCCAGGGCATaGGCGAGGTATCCGCAGCCGAGGAGCAGCAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: NSRGISASSARA*ARYPQPRSSRQ Trigger: TTGCCTGCTGCTCCTCGGCTGCGGATACCTCGCCCATGCCCTGGCCGAGGAAGCCGAGATACCCCGGGAGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS TCA 72 bp | TCCAAGAGTCGCTGGAGGTCCCGGATGCTGTGGATCTaGCTTCGAGCCAGCCGCTCGATCAACTCCCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SKSRWRSRMLWI*LRASRSINSRG Trigger: ACCCCGGGAGTTGATCGAGCGGCTGGCTCGAAGTCAGATCCACAGCATCCGGGACCTCCAGCGACTCTTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS CAA 72 bp | TTGACACTGCGGTGGTGGACCCGTGAAGGCTGGCACTaGACGCTGCTGGTGTTACAACAGCCAGTGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: LTLRWWTREGWH*TLLVLQQPVQR Trigger: GCGCTGCACTGGCTGTTGTAACACCAGCAGCGTCAAGTGCCAGCCTTCACGGGTCCACCACCGCAGTGTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS GCA 72 bp | CGGAGTCTATCTCCAAGAGTCGCTGGAGGTCCCGGATaGTGTGGATCTGACTTCGAGCCAGCCGCTCGATCA | + |
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Preference number: 6 (lower is better) Translates to: RSLSPRVAGGPG*CGSDFEPAARS Trigger: TGATCGAGCGGCTGGCTCGAAGTCAGATCCACAGCATCCGGGACCTCCAGCGACTCTTGGAGATAGACTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS CCA 72 bp | ACATACTCCACTTTGGCCACCTTGACACTGCGGTGGTaGACCCGTGAAGGCTGGCACTTGACGCTGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TYSTLATLTLRW*TREGWHLTLLV Trigger: CACCAGCAGCGTCAAGTGCCAGCCTTCACGGGTCCACCACCGCAGTGTCAAGGTGGCCAAAGTGGAGTATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS CCA 72 bp | CGCTTCTCGGGCACATGGTTAATGGCATGGGACCCATaGGCTCTCAGACTTGTCTCCAAGGCATCCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RFSGTWLMAWDP*ALRLVSKASSA Trigger: GGCTGAGGATGCCTTGGAGACAAGTCTGAGAGCCCATGGGTCCCATGCCATTAACCATGTGCCCGAGAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS CCA 72 bp | TTCCTGCGAATGGGCACAGGCCGCTTCTCGGGCACATaGTTAATGGCATGGGACCCATGGGCTCTCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: FLRMGTGRFSGT*LMAWDPWALRL Trigger: AAGTCTGAGAGCCCATGGGTCCCATGCCATTAACCATGTGCCCGAGAAGCGGCCTGTGCCCATTCGCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS CAA 72 bp | CTTCCTGTCTCCTCCTCCCGATGGTCTGGGTTCAGGTaGGAGGTCGCACATGCACACTCCAGGTGTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LPVSSSRWSGFR*EVAHAHSRCSS Trigger: AGAGGAACACCTGGAGTGTGCATGTGCGACCTCCAACCTGAACCCAGACCATCGGGAGGAGGAGACAGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046901.14 |
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| CDS CCA 72 bp | CATCTGTCTCCTCCTCCCGATGGTCTGGGTTCAGGTTaGAGGTCGCACATGCACACTCCAGGTGTTCCTCTA | + |
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Preference number: 6 (lower is better) Translates to: HLSPPPDGLGSG*RSHMHTPGVPL Trigger: TAGAGGAACACCTGGAGTGTGCATGTGCGACCTCCAACCTGAACCCAGACCATCGGGAGGAGGAGACAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS TCA 72 bp | ATGTGGGGTCCACCTGGCTCCGAGGTATCTCGTAAATaGCCGTCCTGGTCTTGCAAACTGCAGGAATGGCTT | + |
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Preference number: 6 (lower is better) Translates to: MWGPPGSEVSRK*PSWSCKLQEWL Trigger: AAGCCATTCCTGCAGTTTGCAAGACCAGGACGGTCATTTACGAGATACCTCGGAGCCAGGTGGACCCCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS GCA 72 bp | AAACTGCAGGAATGGCTTCCTCAATACTTCTCTTCCTaGGAATGGGCACAGGCCGCTTCTCGGGCACATGGT | + |
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Preference number: 6 (lower is better) Translates to: KLQEWLPQYFSS*EWAQAASRAHG Trigger: ACCATGTGCCCGAGAAGCGGCCTGTGCCCATTCGCAGGAAGAGAAGTATTGAGGAAGCCATTCCTGCAGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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| CDS GCA 72 bp | AGGTATCTCGTAAATGACCGTCCTGGTCTTGCAAACTaGAGGAATGGCTTCCTCAATACTTCTCTTCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: RYLVNDRPGLAN*RNGFLNTSLPA Trigger: CGCAGGAAGAGAAGTATTGAGGAAGCCATTCCTGCAGTTTGCAAGACCAGGACGGTCATTTACGAGATACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000046901.14 ENSMUST00000076095.14 ENSMUST00000110896.2 ENSMUST00000110897.8 |
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