Pregenerated sensors for PDE8A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025584Ensembl transcript IDs: ENSMUST00000026672.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCAGATGCTGCTCTGCAGGCACATGGTCACTGCTAGGAGAGCCATaGTCACCTCTGCAGGGTTCCCAGGGCTGTGGTAACACAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: PRCCSAGTWSLLGEP*SPLQGSQGCGNTES Trigger: GGACTCTGTGTTACCACAGCCCTGGGAACCCTGCAGAGGTGACCATGGCTCTCCTAGCAGTGACCATGTGCCTGCAGAGCAGCATCTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR GCA 90 bp | AGCAGTGTTCCACAACCTGCAACCACACCTCCCCAGATGCTGCTCTaGAGGCACATGGTCACTGCTAGGAGAGCCATGGTCACCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: SSVPQPATTPPQMLL*RHMVTARRAMVTSA Trigger: TGCAGAGGTGACCATGGCTCTCCTAGCAGTGACCATGTGCCTGCAGAGCAGCATCTGGGGAGGTGTGGTTGCAGGTTGTGGAACACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR GCA 90 bp | CTTGCAGCAGTGTTCCACAACCTGCAACCACACCTCCCCAGATGCTaGTCTGCAGGCACATGGTCACTGCTAGGAGAGCCATGGTCACCT | + |
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Preference number: 1 (lower is better) Translates to: LAAVFHNLQPHLPRC*SAGTWSLLGEPWSP Trigger: AGGTGACCATGGCTCTCCTAGCAGTGACCATGTGCCTGCAGAGCAGCATCTGGGGAGGTGTGGTTGCAGGTTGTGGAACACTGCTGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR CCA 90 bp | GCATCCCATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTaGCTAACAGTGAAAGGGCTAAGAAACTGCAGAGACCAGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: ASHGLSKALQMRGQL*LTVKGLRNCRDQAG Trigger: TCCTGCCTGGTCTCTGCAGTTTCTTAGCCCTTTCACTGTTAGCCAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCCATGGGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAAAACTCCTGACAGCAGCTGCTCAGAGCTTGTCTGCAGACGTGGCTTCTTGCTCTGCAGGCACATaGTCACTGCTAGGAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: PVKLLTAAAQSLSADVASCSAGT*SLLGEP Trigger: TGGCTCTCCTAGCAGTGACCATGTGCCTGCAGAGCA...AGAAGCCACGTCTGCAGACAAGCTCTGAGCAGCTGCTGTCAGGAGTTTTACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR CAA 90 bp | TCTGAGAAGGCACCTGTAAAACTCCTGACAGCAGCTGCTCAGAGCTaGTCTGCAGACGTGGCTTCTCTGTTACACACTAGAGTGAGACCC | + |
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Preference number: 2 (lower is better) Translates to: SEKAPVKLLTAAAQS*SADVASLLHTRVRP Trigger: GGGTCTCACTCTAGTGTGTAACAGAGAAGCCACGTCTGCAGACAAGCTCTGAGCAGCTGCTGTCAGGAGTTTTACAGGTGCCTTCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAGTCCAGAGTCGATACAAACCACAGCTCTTGGGGGCCTCACTAAAGAGTGTGGTCACAGAAGGTaGGCATCCCATGGGCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: TQSPESIQTTALGGLTKECGHRR*ASHGLS Trigger: TGAAAGCCCATGGGATGCCCACCTTCTGTGACCACA...CTCTTTAGTGAGGCCCCCAAGAGCTGTGGTTTGTATCGACTCTGGACTCTGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR GCA 72 bp | CCACAACCTGCAACCACACCTCCCCAGATGCTGCTCTaGAGGCACATGGTCACTGCTAGGAGAGCCATGGTC | + |
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Preference number: 3 (lower is better) Translates to: PQPATTPPQMLL*RHMVTARRAMV Trigger: GACCATGGCTCTCCTAGCAGTGACCATGTGCCTGCAGAGCAGCATCTGGGGAGGTGTGGTTGCAGGTTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR CCA 72 bp | TGCTCTGCAGGCACATGGTCACTGCTAGGAGAGCCATaGTCACCTCTGCAGGGTTCCCAGGGCTGTGGTAAC | + |
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Preference number: 3 (lower is better) Translates to: CSAGTWSLLGEP*SPLQGSQGCGN Trigger: GTTACCACAGCCCTGGGAACCCTGCAGAGGTGACCATGGCTCTCCTAGCAGTGACCATGTGCCTGCAGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR CCA 72 bp | CAACCACACCTCCCCAGATGCTGCTCTGCAGGCACATaGTCACTGCTAGGAGAGCCATGGTCACCTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: QPHLPRCCSAGT*SLLGEPWSPLQ Trigger: CTGCAGAGGTGACCATGGCTCTCCTAGCAGTGACCATGTGCCTGCAGAGCAGCATCTGGGGAGGTGTGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR CCA 72 bp | GGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTaGCTAACAGTGAAAGGGCTAAGAAACTGCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: GLSKALQMRGQL*LTVKGLRNCRD Trigger: GTCTCTGCAGTTTCTTAGCCCTTTCACTGTTAGCCAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR GCA 72 bp | CAAACCACAGCTCTTGGGGGCCTCACTAAAGAGCCTTaGAGCAAGCTATGGTGTAGATGTGGTCACAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: QTTALGGLTKEP*SKLWCRCGHRR Trigger: CCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAGGCTCTTTAGTGAGGCCCCCAAGAGCTGTGGTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR CCA 72 bp | TGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTaGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATG | + |
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Preference number: 3 (lower is better) Translates to: CSKLWCRCGHRR*ASHGLSKALQM Trigger: CATCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR TCA 72 bp | TGTCTGCAGACGTGGCTTCTCTGTTACACACTAGAGTaGGACCCACTACATAAAGCCTTCCCCACTAACATC | + |
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Preference number: 3 (lower is better) Translates to: CLQTWLLCYTLE*DPLHKAFPTNI Trigger: GATGTTAGTGGGGAAGGCTTTATGTAGTGGGTCTCACTCTAGTGTGTAACAGAGAAGCCACGTCTGCAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | AAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTGGCCCACTCGATGCAGTaGTCCAGCGGCCGGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: KVGIPWAFKGSADEGAALAHSMQ*SSGRQG Trigger: CCCCTGCCGGCCGCTGGAGCACTGCATCGAGTGGGC...CAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR TCA 90 bp | CCTGTAAAACTCCTGACAGCAGCTGCTCAGAGCTTGTCTGCAGACGTGGCTTCTCGTGGTGGGACATCATaGAGGGAGACGGGGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PVKLLTAAAQSLSADVASRGGTS*RETGVA Trigger: GGCCACCCCCGTCTCCCTTCATGATGTCCCACCACG...AGAAGCCACGTCTGCAGACAAGCTCTGAGCAGCTGCTGTCAGGAGTTTTACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | GCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAGCTGGAAGGCCAGTaGCACGTGGTGGCTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: AASYGVDVVTEGGHPMGFQLEGQ*HVVALQ Trigger: CTGGAGAGCCACCACGTGGCACTGGCCTTCCAGCTG...AAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCGGTTTTCGGAAGTGTaGATGCTCGGGGCGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: WCRCGHRRWASHGLSKALRFSEV*MLGAQP Trigger: GGGCTGCGCCCCGAGCATCCACACTTCCGAAAACCG...CAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGGCCAGGGCAATCCGTaGTGGGACATCATGAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: WSQKVGIPWAFKGSADEGGQGNP*WDIMKG Trigger: TCCCTTCATGATGTCCCACCACGGATTGCCCTGGCC...CCCCTCATCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGAAGGCCAGTGCCACGTaGTGGCTCTCCAGCACAGCG | + |
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Preference number: 4 (lower is better) Translates to: WCRCGHRRWASHGLSKALKASAT*WLSSTA Trigger: CGCTGTGCTGGAGAGCCACCACGTGGCACTGGCCTT...CAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | CCCCATGTTAGTTGTAAAATATCAGCTGCTAGGTACCCAGGTTTGCTTTGCAGGGCGCAGCCCACTCGATaGAGTGCTCCAGCGGCCGGC | + |
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Preference number: 4 (lower is better) Translates to: PHVSCKISAARYPGLLCRAQPTR*SAPAAG Trigger: GCCGGCCGCTGGAGCACTGCATCGAGTGGGCTGCGC...CCTGCAAAGCAAACCTGGGTACCTAGCAGCTGATATTTTACAACTAACATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTGAGAAGGCACCTGTAAAACTCCTGACAGCAGCTGCTCAGAGCTTGTCTGCCAGTGCCACGTGGTaGCTCTCCAGCACAGCGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSEKAPVKLLTAAAQSLSASATW*LSSTAV Trigger: CACCGCTGTGCTGGAGAGCCACCACGTGGCACTGGC...AGACAAGCTCTGAGCAGCTGCTGTCAGGAGTTTTACAGGTGCCTTCTCAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR TCA 90 bp | CTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCGCATGGGGATCATCCTaGGCATTAAACTGTGGCGAG | + |
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Preference number: 4 (lower is better) Translates to: LAASYGVDVVTEGGHPMGAWGSS*ALNCGE Trigger: CTCGCCACAGTTTAATGCTCAGGATGATCCCCATGC...GCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | CTAAGAAACTGCAGAGACCAGGCAGGACAGCCACAGGCCAGGCGTGTACATCACCCTGCACAATGTCTCTaGATCCATCTGTCGGGGATA | + |
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Preference number: 4 (lower is better) Translates to: LRNCRDQAGQPQARRVHHPAQCL*IHLSGI Trigger: TATCCCCGACAGATGGATGCAGAGACATTGTGCAGG...GTGATGTACACGCCTGGCCTGTGGCTGTCCTGCCTGGTCTCTGCAGTTTCTTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | GTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGAGCTGGTTTCCCGCGTTaGACAGGAAGGAGTTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: VDVVTEGGHPMGFQRLCRAGFPR*TGRSWF Trigger: GAACCAACTCCTTCCTGTGCAACGCGGGAAACCAGC...TCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | GGCCTCACTAAAGAGCCTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGCCCCAACGAGGTCTGTaGCATGGGGATCATCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: GLTKEPCSKLWCRCGHRRPQRGL*HGDHPE Trigger: CTCAGGATGATCCCCATGCCACAGACCTCGTTGGGG...CCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAGGCTCTTTAGTGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | GTGGTAACACAGAGTCCAGAGTCGATACAAACCACAGCTCTTGGGGGCCTCACTCAGGGCAATCCGTGGTaGGACATCATGAAGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: VVTQSPESIQTTALGGLTQGNPW*DIMKGD Trigger: GTCTCCCTTCATGATGTCCCACCACGGATTGCCCTG...AGTGAGGCCCCCAAGAGCTGTGGTTTGTATCGACTCTGGACTCTGTGTTACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | CTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCAAAGGAAATACGCCGTaGCGTGAAGCACATCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: LAASYGVDVVTEGGHPMGKGNTP*REAHPQ Trigger: CTGCGGATGTGCTTCACGCCACGGCGTATTTCCTTT...GCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TCACCTCTGCAGGGTTCCCAGGGCTGTGGTAACACAGAGTCCAGAGTCGATACATGCACAGGAAGGAGTTaGTTCTCCCAGGGTGATCCA | + |
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Preference number: 4 (lower is better) Translates to: SPLQGSQGCGNTESRVDTCTGRS*FSQGDP Trigger: TGGATCACCCTGGGAGAACCAACTCCTTCCTGTGCA...TGTATCGACTCTGGACTCTGTGTTACCACAGCCCTGGGAACCCTGCAGAGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | CTAAGAAACTGCAGAGACCAGGCAGGACAGCCACAGGCCAGGCGTGTACATCACCTGAGCATTAAACTGTaGCGAGTACAGCTCAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: LRNCRDQAGQPQARRVHHLSIKL*RVQLSG Trigger: ACCACTGAGCTGTACTCGCCACAGTTTAATGCTCAG...GTGATGTACACGCCTGGCCTGTGGCTGTCCTGCCTGGTCTCTGCAGTTTCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TCACCTCTGCAGGGTTCCCAGGGCTGTGGTAACACAGAGTCCAGAGTCGATACAGAAGGGAGACGGGGGTaGCCAAATTGTTTGAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: SPLQGSQGCGNTESRVDTEGRRG*PNCLKV Trigger: CACTTTCAAACAATTTGGCCACCCCCGTCTCCCTTC...TGTATCGACTCTGGACTCTGTGTTACCACAGCCCTGGGAACCCTGCAGAGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGGGTTCCTCACTCTCCTaGGCTGTCAAAGGCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: WCRCGHRRWASHGLSKALGSSLS*AVKGLL Trigger: CAACAAGCCTTTGACAGCCCAGGAGAGTGAGGAACC...CAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR TCA 90 bp | CTAAGAAACTGCAGAGACCAGGCAGGACAGCCACAGGCCAGGCGTGTACATCACTTCCTCCCTGCCCAATaGCAGGTATTATCTTCACAT | + |
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Preference number: 4 (lower is better) Translates to: LRNCRDQAGQPQARRVHHFLPAQ*QVLSSH Trigger: ATGTGAAGATAATACCTGTCATTGGGCAGGGAGGAA...GTGATGTACACGCCTGGCCTGTGGCTGTCCTGCCTGGTCTCTGCAGTTTCTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | CCTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTCATCGGGCCAAATTaGACATCAGCTACTGATACC | + |
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Preference number: 4 (lower is better) Translates to: PCSKLWCRCGHRRWASHGLIGPN*TSATDT Trigger: GGTATCAGTAGCTGATGTGCAATTTGGCCCGATGAG...CCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TCACCTCTGCAGGGTTCCCAGGGCTGTGGTAACACAGAGTCCAGAGTCGATACATTCTCACATGCCCTGTaGAATCCGTTACACTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: SPLQGSQGCGNTESRVDTFSHAL*NPLHWL Trigger: TAGCCAGTGTAACGGATTCCACAGGGCATGTGAGAA...TGTATCGACTCTGGACTCTGTGTTACCACAGCCCTGGGAACCCTGCAGAGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR TCA 90 bp | CATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTGGCTAACAGTGAAATGGACACATAGTGTCTaGTTTTTCCTCCCTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: HGLSKALQMRGQLWLTVKWTHSV*FFLPAQ Trigger: TTGGGCAGGGAGGAAAAATCAGACACTATGTGTCCA...TTTCACTGTTAGCCAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR TCA 90 bp | ACACAGAGTCCAGAGTCGATACAAACCACAGCTCTTGGGGGCCTCACTAAAGAGTCGATGAAGGAGATCTaGGACTTGGGAATGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TQSPESIQTTALGGLTKESMKEI*DLGMLQ Trigger: CTGCAGCATTCCCAAGTCTCAGATCTCCTTCATCGA...CTCTTTAGTGAGGCCCCCAAGAGCTGTGGTTTGTATCGACTCTGGACTCTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | ACACAGAGTCCAGAGTCGATACAAACCACAGCTCTTGGGGGCCTCACTAAAGAGTCGCACCTCTCCACATaGCAACTGGAGCAGTTCATT | + |
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Preference number: 4 (lower is better) Translates to: TQSPESIQTTALGGLTKESHLST*QLEQFI Trigger: AATGAACTGCTCCAGTTGGCATGTGGAGAGGTGCGA...CTCTTTAGTGAGGCCCCCAAGAGCTGTGGTTTGTATCGACTCTGGACTCTGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGGCGAGTACAGCTCAGTaGTTCTCAGAATATCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: WCRCGHRRWASHGLSKALASTAQ*FSEYPA Trigger: TGCTGGATATTCTGAGAACCACTGAGCTGTACTCGC...CAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | CATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTGGCTAACAGTGAAAGTTCTTCATTTTCTATaGCCAGGGCAATCCGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: HGLSKALQMRGQLWLTVKVLHFL*PGQSVV Trigger: CACCACGGATTGCCCTGGCCATAGAAAATGAAGAAC...TTTCACTGTTAGCCAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATGAGGGGATCAAAGGCCTATTTTaGGTTGCTACTTCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: WSQKVGIPWAFKGSADEGIKGLF*VATSSS Trigger: TGAGCTGGAAGTAGCAACCCAAAATAGGCCTTTGAT...CCCCTCATCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| 3UTR CAA 72 bp | GCACCTGTAAAACTCCTGACAGCAGCTGCTCAGAGCTaGTCTGCAGACGTGGCTTCTCTGTTACACACTAGA | + |
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Preference number: 4 (lower is better) Translates to: APVKLLTAAAQS*SADVASLLHTR Trigger: TCTAGTGTGTAACAGAGAAGCCACGTCTGCAGACAAGCTCTGAGCAGCTGCTGTCAGGAGTTTTACAGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | CATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTGGCTAACAGTGAAAGAGACTTGGGAATGCTaGAGGTGTTTCTGTCAAACA | + |
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Preference number: 4 (lower is better) Translates to: HGLSKALQMRGQLWLTVKETWEC*RCFCQT Trigger: TGTTTGACAGAAACACCTGCAGCATTCCCAAGTCTC...TTTCACTGTTAGCCAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | GTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATTGTCATCTAGGTGCTaGATAAGGTTAGGCAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VDVVTEGGHPMGFQRLCRLSSRC*IRLGRS Trigger: TGACCTGCCTAACCTTATGCAGCACCTAGATGACAA...TCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | CATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTGGCTAACAGTGAAATCATGGAGTTTGTCCTaGAAACAGGTAAGGACAGTC | + |
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Preference number: 4 (lower is better) Translates to: HGLSKALQMRGQLWLTVKSWSLS*KQVRTV Trigger: GACTGTCCTTACCTGTTTCCAGGACAAACTCCATGA...TTTCACTGTTAGCCAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | CCTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGGAACACACTCAGTTGTaGTCTCAACCTTATTGTTGC | + |
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Preference number: 4 (lower is better) Translates to: PCSKLWCRCGHRRWASHGEHTQL*SQPYCC Trigger: GCAACAATAAGGTTGAGACCACAACTGAGTGTGTTC...CCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR TCA 90 bp | GCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCTGATAACCCATTGTTaGTTCAAATGCAGGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AASYGVDVVTEGGHPMGFLITHC*FKCRVC Trigger: GCAAACCCTGCATTTGAATCAACAATGGGTTATCAG...AAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR GCA 90 bp | GTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGAGTCCTTATGTTTGCCTaGCTGGTTATCTGTTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VDVVTEGGHPMGFQRLCRVLMFA*LVICLT Trigger: AGTCAAACAGATAACCAGGCAGGCAAACATAAGGAC...TCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | CCTGTAAAACTCCTGACAGCAGCTGCTCAGAGCTTGTCTGCAGACGTGGCTTCTTCCTGTCCTTATGTTTaGCTGCCTGGTTATCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PVKLLTAAAQSLSADVASSCPYV*LPGYLF Trigger: AAACAGATAACCAGGCAGGCAAACATAAGGACAGGA...AGAAGCCACGTCTGCAGACAAGCTCTGAGCAGCTGCTGTCAGGAGTTTTACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR TCA 90 bp | CATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTGGCTAACAGTGAAATTTTCTCTAATGCAGTaGATACTGAGTTACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HGLSKALQMRGQLWLTVKFSLMQ*ILSYKP Trigger: GGGCTTGTAACTCAGTATTCACTGCATTAGAGAAAA...TTTCACTGTTAGCCAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAATTCTCTTCATCAGTCTaGGAGAAATACTCCTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASYGVDVVTEGGHPMGFQFSSSV*EKYSSE Trigger: CTCAGAGGAGTATTTCTCTCAGACTGATGAAGAGAA...TTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR GCA 90 bp | GTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGACAGCAACCTCGTCAATaGGATCTAAAGTTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VDVVTEGGHPMGFQRLCRQQPRQ*DLKFPL Trigger: TAAAGGAAACTTTAGATCGCATTGACGAGGTTGCTG...TCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CCA 90 bp | GTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATGGAATCCGTTACACTaGCTATCTTCTTTGGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VDVVTEGGHPMGFQRLCRWNPLH*LSSLVN Trigger: GTTTACCAAAGAAGATAGCCAGTGTAACGGATTCCA...TCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | GTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGAATGATGATGATGTCATaGAGTTTGTCCTGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VDVVTEGGHPMGFQRLCRMMMMS*SLSWKQ Trigger: CTGTTTCCAGGACAAACTCCATGACATCATCATCAT...TCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTCACTAAAGAGCCTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGCCTTTATTTTGTCTCTaGAAAGGAAATACGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLTKEPCSKLWCRCGHRRPLFCL*KGNTPW Trigger: CCACGGCGTATTTCCTTTCCAGAGACAAAATAAAGG...CCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAGGCTCTTTAGTGAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CCA 90 bp | TTCTCTGAGAAGGCACCTGTAAAACTCCTGACAGCAGCTGCTCAGAGCTTGTCTTGTCGGGGATATCTGTaGTCTATGATGATGATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSEKAPVKLLTAAAQSLSCRGYL*SMMMMS Trigger: TGACATCATCATCATAGACCACAGATATCCCCGACA...AGACAAGCTCTGAGCAGCTGCTGTCAGGAGTTTTACAGGTGCCTTCTCAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR TCA 90 bp | CCCCATGTTAGTTGTAAAATATCAGCTGCTAGGTACCCAGGTTTGCTTTGCAGGGAGGAATGTCTTCTCTaGCTGGAAACGTCACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHVSCKISAARYPGLLCREECLL*LETSLV Trigger: AACAAGTGACGTTTCCAGTCAGAGAAGACATTCCTC...CCTGCAAAGCAAACCTGGGTACCTAGCAGCTGATATTTTACAACTAACATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR GCA 90 bp | GCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAATCATTCCTCTCCATTTaGTTAAAGATATTGCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASYGVDVVTEGGHPMGFQSFLSI*LKILHW Trigger: CCAGTGCAATATCTTTAAGCAAATGGAGAGGAATGA...TTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CCA 90 bp | CCCCATGTTAGTTGTAAAATATCAGCTGCTAGGTACCCAGGTTTGCTTTGCAGGACAGGACTGTTTTCCTaGGCAGCATTGATAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: PHVSCKISAARYPGLLCRTGLFS*AALIIL Trigger: CAATATTATCAATGCTGCCCAGGAAAACAGTCCTGT...CCTGCAAAGCAAACCTGGGTACCTAGCAGCTGATATTTTACAACTAACATGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CCA 90 bp | CCCCATGTTAGTTGTAAAATATCAGCTGCTAGGTACCCAGGTTTGCTTTGCAGGTTAAAGATATTGCACTaGTCATTTTCAAGCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHVSCKISAARYPGLLCRLKILH*SFSSVS Trigger: GCTGACGCTTGAAAATGACCAGTGCAATATCTTTAA...CCTGCAAAGCAAACCTGGGTACCTAGCAGCTGATATTTTACAACTAACATGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| 3UTR CAA 72 bp | GTCTGTAACCAAATCACGCACACACAAGTCATGAATTaGGTCAAGGCATCTGAAATTGGCTTTGAAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: VCNQITHTQVMN*VKASEIGFEVF Trigger: AAATACTTCAAAGCCAATTTCAGATGCCTTGACCAAATTCATGACTTGTGTGTGCGTGATTTGGTTACAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS CCA 90 bp | GGGCCCGGGACGTCCACGTCCACGTCCTCGTCCTCGCCGTCGCTGTaGCTAAACGTTCGGTTTTCGGAAGTGTGGATGCTCGGGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPGTSTSTSSSSPSL*LNVRFSEVWMLGAQ Trigger: CTGCGCCCCGAGCATCCACACTTCCGAAAACCGAACGTTTAGCCACAGCGACGGCGAGGACGAGGACGTGGACGTGGACGTCCCGGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTGGACTGGAAACGTCACTaGTTCTGGAGGAAACCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KVGIPWAFKGSADEGAALDWKRH*FWRKPL Trigger: AAGCGGTTTCCTCCAGAACAAGTGACGTTTCCAGTC...CAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | TGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGACCTGAAGTTGGTCTaGATGAAATCTCATCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WSQKVGIPWAFKGSADEGDLKLV*MKSHRA Trigger: GGCCCGATGAGATTTCATCAAGACCAACTTCAGGTC...CCCCTCATCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS TCA 90 bp | TTGGTCTTGATGAAATCTCATCGGGCCAAATTGCACATCAGCTACTaGTACCTTCGAGGCGCCGTTATCCCGAGGCTGAGGCTCCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVLMKSHRAKLHISY*YLRGAVIPRLRLHE Trigger: CTCGTGGAGCCTCAGCCTCGGGATAACGGCGCCTCGAAGGTATCAGTAGCTGATGTGCAATTTGGCCCGATGAGATTTCATCAAGACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS CCA 90 bp | TCCATTTGCTTAAAGATATTGCACTGGTCATTTTCAAGCGTCAGCTaGAAGGCCAGTGCCACGTGGTGGCTCTCCAGCACAGCGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: SICLKILHWSFSSVS*KASATWWLSSTAVS Trigger: CGACACCGCTGTGCTGGAGAGCCACCACGTGGCACTGGCCTTCCAGCTGACGCTTGAAAATGACCAGTGCAATATCTTTAAGCAAATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | GGCCTCACTAAAGAGCCTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGAGCTGGTTTCCCGCGTaGCACAGGAAGGAGTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLTKEPCSKLWCRCGHRRSWFPA*HRKELV Trigger: AACCAACTCCTTCCTGTGCAACGCGGGAAACCAGCT...CCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAGGCTCTTTAGTGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS TCA 90 bp | TGTTCTTCATTTTCTATGGCCAGGGCAATCCGTGGTGGGACATCATaGAGGGAGACGGGGGTGGCCAAATTGTTTGAAAGTGGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSSFSMARAIRGGTS*RETGVAKLFESGGR Trigger: CCTCCCACCACTTTCAAACAATTTGGCCACCCCCGTCTCCCTTCATGATGTCCCACCACGGATTGCCCTGGCCATAGAAAATGAAGAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | CCTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGACTCCTTGCCATTCCTaGTCTACTGTGACACACGAA | + |
|
Preference number: 5 (lower is better) Translates to: PCSKLWCRCGHRRWASHGTPCHS*STVTHE Trigger: TTCGTGTGTCACAGTAGACAAGGAATGGCAAGGAGT...CCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | AAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGCAGCTCTGACCTTATTGTTGCCATaGCACACTCTGATAATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KVGIPWAFKGSADEGAALTLLLP*HTLIMD Trigger: GTCCATTATCAGAGTGTGCAATGGCAACAATAAGGT...CAGAGCTGCCCCCTCATCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | CTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCGTGGTCTCAACCTTATaGTTGCCATTGCACACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAASYGVDVVTEGGHPMGVVSTL*LPLHTL Trigger: CAGAGTGTGCAATGGCAACAATAAGGTTGAGACCAC...GCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | CTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCGGGTGGCCAAATTGTTaGAAAGTGGTGGGAGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAASYGVDVVTEGGHPMGGWPNC*KVVGGF Trigger: AAAACCTCCCACCACTTTCAAACAATTTGGCCACCC...GCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTGAGAAGGCACCTGTAAAACTCCTGACAGCAGCTGCTCAGAGCTTGTCTACGGGGGTGGCCAAATaGTTTGAAAGTGGTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSEKAPVKLLTAAAQSLSTGVAK*FESGGR Trigger: CCTCCCACCACTTTCAAACAATTTGGCCACCCCCGT...AGACAAGCTCTGAGCAGCTGCTGTCAGGAGTTTTACAGGTGCCTTCTCAGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 90 bp | CTTCCAGCTCAAAAATGTCAAAGTCCCACTGTTCTTCATTTTCTATaGCCAGGGCAATCCGTGGTGGGACATCATGAAGGGAGACGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPAQKCQSPTVLHFL*PGQSVVGHHEGRRG Trigger: CCCCCGTCTCCCTTCATGATGTCCCACCACGGATTGCCCTGGCCATAGAAAATGAAGAACAGTGGGACTTTGACATTTTTGAGCTGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | CTAAGAAACTGCAGAGACCAGGCAGGACAGCCACAGGCCAGGCGTGTACATCACCTGACTGATAACCCATaGTTGATTCAAATGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LRNCRDQAGQPQARRVHHLTDNP*LIQMQG Trigger: ACCCTGCATTTGAATCAACAATGGGTTATCAGTCAG...GTGATGTACACGCCTGGCCTGTGGCTGTCCTGCCTGGTCTCTGCAGTTTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS TCA 90 bp | TCAGACATTAAGCCCCCAACGAGGTCTGTGGCATGGGGATCATCCTaGGCATTAAACTGTGGCGAGTACAGCTCAGTGGTTCTCAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: SDIKPPTRSVAWGSS*ALNCGEYSSVVLRI Trigger: TATTCTGAGAACCACTGAGCTGTACTCGCCACAGTTTAATGCTCAGGATGATCCCCATGCCACAGACCTCGTTGGGGGCTTAATGTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 90 bp | CGGGGATATCTGTGGTCTATGATGATGATGTCATGGAGTTTGTCCTaGAAACAGGTAAGGACAGTCTGCACCTCCTTGGTGACTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGYLWSMMMMSWSLS*KQVRTVCTSLVTVH Trigger: GTGCACAGTCACCAAGGAGGTGCAGACTGTCCTTACCTGTTTCCAGGACAAACTCCATGACATCATCATCATAGACCACAGATATCCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 90 bp | GTCTTCTCTGACTGGAAACGTCACTTGTTCTGGAGGAAACCGCTTTaGCGTCCATCGAATGTTTCCTCCTGTCCTTATGTTTGCCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VFSDWKRHLFWRKPL*RPSNVSSCPYVCLP Trigger: AGGCAGGCAAACATAAGGACAGGAGGAAACATTCGATGGACGCCAAAGCGGTTTCCTCCAGAACAAGTGACGTTTCCAGTCAGAGAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | GCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTGGTATGGTAAACTCCTaGCCATTCCTTGTCTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: AASYGVDVVTEGGHPMGFGMVNS*PFLVYC Trigger: ACAGTAGACAAGGAATGGCAAGGAGTTTACCATACC...AAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGGTCTCAACCTTATTGTaGCCATTGCACACTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: PCSKLWCRCGHRRWASHGVSTLL*PLHTLI Trigger: TATCAGAGTGTGCAATGGCAACAATAAGGTTGAGAC...CCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | TGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGCAGATGAGGGGGTGGTGGGAGGTTTTTaGTTGCAAGAATATACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WSQKVGIPWAFKGSADEGVVGGF*LQEYTH Trigger: ATGAGTATATTCTTGCAACAAAAAACCTCCCACCAC...CCCCTCATCTGCAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS GCA 90 bp | CTGCACCTCCTTGGTGACTGTGCACTTAAACCCAGCTTTCTCACATaGCCTGTGGAATCCGTTACACTGGCTATCTTCTTTGGTAAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LHLLGDCALKPSFLT*PVESVTLAIFFGKH Trigger: GTGTTTACCAAAGAAGATAGCCAGTGTAACGGATTCCACAGGGCATGTGAGAAAGCTGGGTTTAAGTGCACAGTCACCAAGGAGGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS GCA 90 bp | TTCTTCTCATCCAGTCCTTTCCAGTACCTGAAGTTGTCATCTAGGTaGTGCATAAGGTTAGGCAGGTCAACGAAGGCATCCCAGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FFSSSPFQYLKLSSR*CIRLGRSTKASQAS Trigger: TGATGCCTGGGATGCCTTCGTTGACCTGCCTAACCTTATGCAGCACCTAGATGACAACTTCAGGTACTGGAAAGGACTGGATGAGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 90 bp | GCATCCATCTGTCGGGGATATCTGTGGTCTATGATGATGATGTCATaGAGTTTGTCCTGGAAACAGGTAAGGACAGTCTGCACCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ASICRGYLWSMMMMS*SLSWKQVRTVCTSL Trigger: CAAGGAGGTGCAGACTGTCCTTACCTGTTTCCAGGACAAACTCCATGACATCATCATCATAGACCACAGATATCCCCGACAGATGGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGAGTCCAGAGTCGATACAAACCACAGCTCTTGGGGGCCTCACTAAAGAGCACTGGCTATCTTCTTaGGTAAACACTAACAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TQSPESIQTTALGGLTKEHWLSS*VNTNRT Trigger: GGTCCTGTTAGTGTTTACCAAAGAAGATAGCCAGTG...CTCTTTAGTGAGGCCCCCAAGAGCTGTGGTTTGTATCGACTCTGGACTCTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAAAGATGATTCTTCTTaGTCCACCCTGCGTACTACG | + |
|
Preference number: 5 (lower is better) Translates to: ASYGVDVVTEGGHPMGFQKDDSS*STLRTT Trigger: CGTAGTACGCAGGGTGGACAAAGAAGAATCATCTTT...TTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CAA 90 bp | CTTGCAGCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCGCAGCATTGATAATATaGATTACCTTGGTGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LAASYGVDVVTEGGHPMGAALII*ITLVMG Trigger: ACCCATCACCAAGGTAATCAATATTATCAATGCTGC...GCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGCTGCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS TCA 90 bp | TCAATCATCATAGAATGTATCCGGGCCAAAGAGGAATGTCTTCTCTaGCTGGAAACGTCACTTGTTCTGGAGGAAACCGCTTTGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SIIIECIRAKEECLL*LETSLVLEETALAS Trigger: GGACGCCAAAGCGGTTTCCTCCAGAACAAGTGACGTTTCCAGTCAGAGAAGACATTCCTCTTTGGCCCGGATACATTCTATGATGATTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS GCA 90 bp | CGCTTTGGCGTCCATCGAATGTTTCCTCCTGTCCTTATGTTTGCCTaGCTGGTTATCTGTTTGACTGTCAGTCTGAACACACTCAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RFGVHRMFPPVLMFA*LVICLTVSLNTLSC Trigger: ACAACTGAGTGTGTTCAGACTGACAGTCAAACAGATAACCAGGCAGGCAAACATAAGGACAGGAGGAAACATTCGATGGACGCCAAAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS CCA 90 bp | GTCGGCACACTTAATCATCATTCTTTTGATGAGAGCCCGGCTCTCTaGCGTCTTGAGCATAGCTTTTATGTCTTCCAGACTTCTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VGTLNHHSFDESPAL*RLEHSFYVFQTSVR Trigger: CCTGACAGAAGTCTGGAAGACATAAAAGCTATGCTCAAGACGCCAGAGAGCCGGGCTCTCATCAAAAGAATGATGATTAAGTGTGCCGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS-3UTR CAA 90 bp | TCACCTCTGCAGGGTTCCCAGGGCTGTGGTAACACAGAGTCCAGAGTCGATACAATCTCCATTTTTCTTTaGGGTATGGTAAACTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLQGSQGCGNTESRVDTISIFL*GMVNSL Trigger: CAAGGAGTTTACCATACCCAAAAGAAAAATGGAGAT...TGTATCGACTCTGGACTCTGTGTTACCACAGCCCTGGGAACCCTGCAGAGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS GCA 90 bp | ATGATGATGTCATGGAGTTTGTCCTGGAAACAGGTAAGGACAGTCTaGACCTCCTTGGTGACTGTGCACTTAAACCCAGCTTTCTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: MMMSWSLSWKQVRTV*TSLVTVHLNPAFSH Trigger: ATGTGAGAAAGCTGGGTTTAAGTGCACAGTCACCAAGGAGGTGCAGACTGTCCTTACCTGTTTCCAGGACAAACTCCATGACATCATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
||
| CDS CCA 90 bp | TCCTTGGTGACTGTGCACTTAAACCCAGCTTTCTCACATGCCCTGTaGAATCCGTTACACTGGCTATCTTCTTTGGTAAACACTAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLVTVHLNPAFSHAL*NPLHWLSSLVNTNR Trigger: CCTGTTAGTGTTTACCAAAGAAGATAGCCAGTGTAACGGATTCCACAGGGCATGTGAGAAAGCTGGGTTTAAGTGCACAGTCACCAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | GCAAGCTATGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAACTGATAACCCATTGTaGATTCAAATGCAGGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: ASYGVDVVTEGGHPMGFQTDNPL*IQMQGL Trigger: CAAACCCTGCATTTGAATCAACAATGGGTTATCAGT...TTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCATAGCTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTGAGAAGGCACCTGTAAAACTCCTGACAGCAGCTGCTCAGAGCTTGTCTTCTGAACACACTCAGTaGTGGTCTCAACCTTATTGT | + |
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Preference number: 5 (lower is better) Translates to: FSEKAPVKLLTAAAQSLSSEHTQ*WSQPYC Trigger: ACAATAAGGTTGAGACCACAACTGAGTGTGTTCAGA...AGACAAGCTCTGAGCAGCTGCTGTCAGGAGTTTTACAGGTGCCTTCTCAGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | TGGTGTAGATGTGGTCACAGAAGGTGGGCATCCCATGGGCTTTCAAAGGCTCTGTTTTCCTGGGCAGCATaGATAATATTGATTACCTTG | + |
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Preference number: 5 (lower is better) Translates to: WCRCGHRRWASHGLSKALFSWAA*IILITL Trigger: CAAGGTAATCAATATTATCAATGCTGCCCAGGAAAA...CAGAGCCTTTGAAAGCCCATGGGATGCCCACCTTCTGTGACCACATCTACACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 90 bp | ATAGACCTGCACAATGTCTCTGCATCCATCTGTCGGGGATATCTGTaGTCTATGATGATGATGTCATGGAGTTTGTCCTGGAAACAGGTA | + |
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Preference number: 5 (lower is better) Translates to: IDLHNVSASICRGYL*SMMMMSWSLSWKQV Trigger: TACCTGTTTCCAGGACAAACTCCATGACATCATCATCATAGACCACAGATATCCCCGACAGATGGATGCAGAGACATTGTGCAGGTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS-3UTR CAA 90 bp | CCCCATGTTAGTTGTAAAATATCAGCTGCTAGGTACCCAGGTTTGCTTTGCAGGTTCCAGTACCTGAAGTaGTCATCTAGGTGCTGCATA | + |
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Preference number: 5 (lower is better) Translates to: PHVSCKISAARYPGLLCRFQYLK*SSRCCI Trigger: TATGCAGCACCTAGATGACAACTTCAGGTACTGGAA...CCTGCAAAGCAAACCTGGGTACCTAGCAGCTGATATTTTACAACTAACATGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 90 bp | CACACGAATTTATGGCATCGAGCAAATCACCTTTCTTTTCATTTATaGGCACTTGTGCTAACTCCTTCCCTATTAATTCTCCTGACTGAT | + |
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Preference number: 5 (lower is better) Translates to: HTNLWHRANHLSFHL*ALVLTPSLLILLTD Trigger: ATCAGTCAGGAGAATTAATAGGGAAGGAGTTAGCACAAGTGCCCATAAATGAAAAGAAAGGTGATTTGCTCGATGCCATAAATTCGTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS GCA 72 bp | TACTCCTCTGAGATGCGCGCAGCCCACTCGATGCAGTaGTCCAGCGGCCGGCAGGGGTTGGACACGTCGGCA | + |
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Preference number: 6 (lower is better) Translates to: YSSEMRAAHSMQ*SSGRQGLDTSA Trigger: TGCCGACGTGTCCAACCCCTGCCGGCCGCTGGAGCACTGCATCGAGTGGGCTGCGCGCATCTCAGAGGAGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 72 bp | ACGTCCACGTCCACGTCCTCGTCCTCGCCGTCGCTGTaGCTAAACGTTCGGTTTTCGGAAGTGTGGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: TSTSTSSSSPSL*LNVRFSEVWML Trigger: GAGCATCCACACTTCCGAAAACCGAACGTTTAGCCACAGCGACGGCGAGGACGAGGACGTGGACGTGGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 72 bp | CCACTGTTCTTCATTTTCTATGGCCAGGGCAATCCGTaGTGGGACATCATGAAGGGAGACGGGGGTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: PLFFIFYGQGNP*WDIMKGDGGGQ Trigger: TTGGCCACCCCCGTCTCCCTTCATGATGTCCCACCACGGATTGCCCTGGCCATAGAAAATGAAGAACAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 90 bp | GGCCGGCAGGGGTTGGACACGTCGGCACACTTAATCATCATTCTTTaGATGAGAGCCCGGCTCTCTGGCGTCTTGAGCATAGCTTTTATG | + |
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Preference number: 6 (lower is better) Translates to: GRQGLDTSAHLIIIL*MRARLSGVLSIAFM Trigger: CATAAAAGCTATGCTCAAGACGCCAGAGAGCCGGGCTCTCATCAAAAGAATGATGATTAAGTGTGCCGACGTGTCCAACCCCTGCCGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS TCA 72 bp | ATGAAATCTCATCGGGCCAAATTGCACATCAGCTACTaGTACCTTCGAGGCGCCGTTATCCCGAGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: MKSHRAKLHISY*YLRGAVIPRLR Trigger: CCTCAGCCTCGGGATAACGGCGCCTCGAAGGTATCAGTAGCTGATGTGCAATTTGGCCCGATGAGATTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 72 bp | CTGTTCTTCATTTTCTATGGCCAGGGCAATCCGTGGTaGGACATCATGAAGGGAGACGGGGGTGGCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: LFFIFYGQGNPW*DIMKGDGGGQI Trigger: AATTTGGCCACCCCCGTCTCCCTTCATGATGTCCCACCACGGATTGCCCTGGCCATAGAAAATGAAGAACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 90 bp | TCATGGAGTTTGTCCTGGAAACAGGTAAGGACAGTCTGCACCTCCTaGGTGACTGTGCACTTAAACCCAGCTTTCTCACATGCCCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SWSLSWKQVRTVCTS*VTVHLNPAFSHALW Trigger: CCACAGGGCATGTGAGAAAGCTGGGTTTAAGTGCACAGTCACCAAGGAGGTGCAGACTGTCCTTACCTGTTTCCAGGACAAACTCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 90 bp | GTATCCGGGCCAAAGAGGAATGTCTTCTCTGACTGGAAACGTCACTaGTTCTGGAGGAAACCGCTTTGGCGTCCATCGAATGTTTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VSGPKRNVFSDWKRH*FWRKPLWRPSNVSS Trigger: GGAGGAAACATTCGATGGACGCCAAAGCGGTTTCCTCCAGAACAAGTGACGTTTCCAGTCAGAGAAGACATTCCTCTTTGGCCCGGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS TCA 72 bp | TTTTCTATGGCCAGGGCAATCCGTGGTGGGACATCATaGAGGGAGACGGGGGTGGCCAAATTGTTTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: FSMARAIRGGTS*RETGVAKLFES Trigger: ACTTTCAAACAATTTGGCCACCCCCGTCTCCCTTCATGATGTCCCACCACGGATTGCCCTGGCCATAGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 72 bp | GGGTTGGACACGTCGGCACACTTAATCATCATTCTTTaGATGAGAGCCCGGCTCTCTGGCGTCTTGAGCATA | + |
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Preference number: 6 (lower is better) Translates to: GLDTSAHLIIIL*MRARLSGVLSI Trigger: TATGCTCAAGACGCCAGAGAGCCGGGCTCTCATCAAAAGAATGATGATTAAGTGTGCCGACGTGTCCAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 90 bp | AGGCTTCGAAGCTTCTTCTCATCCAGTCCTTTCCAGTACCTGAAGTaGTCATCTAGGTGCTGCATAAGGTTAGGCAGGTCAACGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RLRSFFSSSPFQYLK*SSRCCIRLGRSTKA Trigger: TGCCTTCGTTGACCTGCCTAACCTTATGCAGCACCTAGATGACAACTTCAGGTACTGGAAAGGACTGGATGAGAAGAAGCTTCGAAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 72 bp | GACTGGAAACGTCACTTGTTCTGGAGGAAACCGCTTTaGCGTCCATCGAATGTTTCCTCCTGTCCTTATGTT | + |
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Preference number: 6 (lower is better) Translates to: DWKRHLFWRKPL*RPSNVSSCPYV Trigger: AACATAAGGACAGGAGGAAACATTCGATGGACGCCAAAGCGGTTTCCTCCAGAACAAGTGACGTTTCCAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 72 bp | AATGTATCCGGGCCAAAGAGGAATGTCTTCTCTGACTaGAAACGTCACTTGTTCTGGAGGAAACCGCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: NVSGPKRNVFSD*KRHLFWRKPLW Trigger: CCAAAGCGGTTTCCTCCAGAACAAGTGACGTTTCCAGTCAGAGAAGACATTCCTCTTTGGCCCGGATACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 72 bp | TTGTCCTGGAAACAGGTAAGGACAGTCTGCACCTCCTaGGTGACTGTGCACTTAAACCCAGCTTTCTCACAT | + |
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Preference number: 6 (lower is better) Translates to: LSWKQVRTVCTS*VTVHLNPAFSH Trigger: ATGTGAGAAAGCTGGGTTTAAGTGCACAGTCACCAAGGAGGTGCAGACTGTCCTTACCTGTTTCCAGGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 72 bp | CCTCCTGTCCTTATGTTTGCCTGCCTGGTTATCTGTTaGACTGTCAGTCTGAACACACTCAGTTGTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: PPVLMFACLVIC*TVSLNTLSCGL Trigger: GAGACCACAACTGAGTGTGTTCAGACTGACAGTCAAACAGATAACCAGGCAGGCAAACATAAGGACAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 72 bp | CCAAAGAGGAATGTCTTCTCTGACTGGAAACGTCACTaGTTCTGGAGGAAACCGCTTTGGCGTCCATCGAAT | + |
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Preference number: 6 (lower is better) Translates to: PKRNVFSDWKRH*FWRKPLWRPSN Trigger: ATTCGATGGACGCCAAAGCGGTTTCCTCCAGAACAAGTGACGTTTCCAGTCAGAGAAGACATTCCTCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 90 bp | ATCTGTCGGGGATATCTGTGGTCTATGATGATGATGTCATGGAGTTaGTCCTGGAAACAGGTAAGGACAGTCTGCACCTCCTTGGTGACT | + |
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Preference number: 6 (lower is better) Translates to: ICRGYLWSMMMMSWS*SWKQVRTVCTSLVT Trigger: AGTCACCAAGGAGGTGCAGACTGTCCTTACCTGTTTCCAGGACAAACTCCATGACATCATCATCATAGACCACAGATATCCCCGACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 90 bp | CGTGTGAAGCCAGCAGCAAGGAAGGGCATTAAAGATGATTCTTCTTaGTCCACCCTGCGTACTACGCCAACAATAACTGTGTTTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RVKPAARKGIKDDSS*STLRTTPTITVFSE Trigger: CTCAGAAAACACAGTTATTGTTGGCGTAGTACGCAGGGTGGACAAAGAAGAATCATCTTTAATGCCCTTCCTTGCTGCTGGCTTCACACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS TCA 72 bp | ATAGAATGTATCCGGGCCAAAGAGGAATGTCTTCTCTaGCTGGAAACGTCACTTGTTCTGGAGGAAACCGCT | + |
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Preference number: 6 (lower is better) Translates to: IECIRAKEECLL*LETSLVLEETA Trigger: AGCGGTTTCCTCCAGAACAAGTGACGTTTCCAGTCAGAGAAGACATTCCTCTTTGGCCCGGATACATTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS GCA 72 bp | CTTGGTGACTGTGCACTTAAACCCAGCTTTCTCACATaGCCTGTGGAATCCGTTACACTGGCTATCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LGDCALKPSFLT*PVESVTLAIFF Trigger: AAAGAAGATAGCCAGTGTAACGGATTCCACAGGGCATGTGAGAAAGCTGGGTTTAAGTGCACAGTCACCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS GCA 72 bp | TGGCGTCCATCGAATGTTTCCTCCTGTCCTTATGTTTaGCTGCCTGGTTATCTGTTTGACTGTCAGTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: WRPSNVSSCPYV*LPGYLFDCQSE Trigger: TTCAGACTGACAGTCAAACAGATAACCAGGCAGGCAAACATAAGGACAGGAGGAAACATTCGATGGACGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 72 bp | TGTCGGGGATATCTGTGGTCTATGATGATGATGTCATaGAGTTTGTCCTGGAAACAGGTAAGGACAGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: CRGYLWSMMMMS*SLSWKQVRTVC Trigger: GCAGACTGTCCTTACCTGTTTCCAGGACAAACTCCATGACATCATCATCATAGACCACAGATATCCCCGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 72 bp | CACAATGTCTCTGCATCCATCTGTCGGGGATATCTGTaGTCTATGATGATGATGTCATGGAGTTTGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: HNVSASICRGYL*SMMMMSWSLSW Trigger: CCAGGACAAACTCCATGACATCATCATCATAGACCACAGATATCCCCGACAGATGGATGCAGAGACATTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 72 bp | GGATATCTGTGGTCTATGATGATGATGTCATGGAGTTaGTCCTGGAAACAGGTAAGGACAGTCTGCACCTCC | + |
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Preference number: 6 (lower is better) Translates to: GYLWSMMMMSWS*SWKQVRTVCTS Trigger: GGAGGTGCAGACTGTCCTTACCTGTTTCCAGGACAAACTCCATGACATCATCATCATAGACCACAGATATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 72 bp | CCAGCAGCAAGGAAGGGCATTAAAGATGATTCTTCTTaGTCCACCCTGCGTACTACGCCAACAATAACTGTG | + |
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Preference number: 6 (lower is better) Translates to: PAARKGIKDDSS*STLRTTPTITV Trigger: CACAGTTATTGTTGGCGTAGTACGCAGGGTGGACAAAGAAGAATCATCTTTAATGCCCTTCCTTGCTGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 72 bp | AGCTTCTTCTCATCCAGTCCTTTCCAGTACCTGAAGTaGTCATCTAGGTGCTGCATAAGGTTAGGCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SFFSSSPFQYLK*SSRCCIRLGRS Trigger: TGACCTGCCTAACCTTATGCAGCACCTAGATGACAACTTCAGGTACTGGAAAGGACTGGATGAGAAGAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 72 bp | ACTGTGCACTTAAACCCAGCTTTCTCACATGCCCTGTaGAATCCGTTACACTGGCTATCTTCTTTGGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: TVHLNPAFSHAL*NPLHWLSSLVN Trigger: GTTTACCAAAGAAGATAGCCAGTGTAACGGATTCCACAGGGCATGTGAGAAAGCTGGGTTTAAGTGCACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 72 bp | ATCATTCTTTTGATGAGAGCCCGGCTCTCTGGCGTCTaGAGCATAGCTTTTATGTCTTCCAGACTTCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: IILLMRARLSGV*SIAFMSSRLLS Trigger: TGACAGAAGTCTGGAAGACATAAAAGCTATGCTCAAGACGCCAGAGAGCCGGGCTCTCATCAAAAGAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 90 bp | CGAATGTTTCCTCCTGTCCTTATGTTTGCCTGCCTGGTTATCTGTTaGACTGTCAGTCTGAACACACTCAGTTGTGGTCTCAACCTTATT | + |
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Preference number: 6 (lower is better) Translates to: RMFPPVLMFACLVIC*TVSLNTLSCGLNLI Trigger: AATAAGGTTGAGACCACAACTGAGTGTGTTCAGACTGACAGTCAAACAGATAACCAGGCAGGCAAACATAAGGACAGGAGGAAACATTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 90 bp | AAGAGTGGTAGTTGGATTCGATCATCTGAAACCAAGATCTCAGCGTaGTCTCAGAGCACTGTAAGAACTCACACATTCCAAAACGCGCAA | + |
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Preference number: 6 (lower is better) Translates to: KSGSWIRSSETKISA*SQSTVRTHTFQNAQ Trigger: TTGCGCGTTTTGGAATGTGTGAGTTCTTACAGTGCTCTGAGACAACGCTGAGATCTTGGTTTCAGATGATCGAATCCAACTACCACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CCA 72 bp | CTTAATCATCATTCTTTTGATGAGAGCCCGGCTCTCTaGCGTCTTGAGCATAGCTTTTATGTCTTCCAGACT | + |
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Preference number: 6 (lower is better) Translates to: LNHHSFDESPAL*RLEHSFYVFQT Trigger: AGTCTGGAAGACATAAAAGCTATGCTCAAGACGCCAGAGAGCCGGGCTCTCATCAAAAGAATGATGATTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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| CDS CAA 90 bp | TTGCTGTATGTTATCTCCATTTTTCTTTTGGGTATGGTAAACTCCTaGCCATTCCTTGTCTACTGTGACACACGAATTTATGGCATCGAG | + |
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Preference number: 6 (lower is better) Translates to: LLYVISIFLLGMVNS*PFLVYCDTRIYGIE Trigger: CTCGATGCCATAAATTCGTGTGTCACAGTAGACAAGGAATGGCAAGGAGTTTACCATACCCAAAAGAAAAATGGAGATAACATACAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026672.8 |
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