Pregenerated sensors for PDE7B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019990Ensembl transcript IDs: ENSMUST00000020165.14, ENSMUST00000164195.2, ENSMUST00000169016.8, ENSMUST00000169404.8, ENSMUST00000170265.8
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTACCTTAGGGCGTGGCACCTTCTGTCTGCTCCAGGGTCTCAGGTaGGGGGCCCGCCAGGTCCTGGCCGCTGCCCCTGCGTCTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: ATLGRGTFCLLQGLR*GARQVLAAAPASVL Trigger: CAGCACAGACGCAGGGGCAGCGGCCAGGACCTGGCGGGCCCCGCACCTGAGACCCTGGAGCAGACAGAAGGTGCCACGCCCTAAGGTAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR CCA 90 bp | GGACGGACAGATGGCCGTGCATCAGCAGACAGCTACCTTAGGGCGTaGCACCTTCTGTCTGCTCCAGGGTCTCAGGTGCGGGGCCCGCCA | + |
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Preference number: 1 (lower is better) Translates to: GRTDGRASADSYLRA*HLLSAPGSQVRGPP Trigger: TGGCGGGCCCCGCACCTGAGACCCTGGAGCAGACAGAAGGTGCCACGCCCTAAGGTAGCTGTCTGCTGATGCACGGCCATCTGTCCGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR GCA 90 bp | CCCAGCGTGATGGGCTTGTTGCGAGGGCAGTCGGACGGATGGCCGTaGTCCTGTGGACGGACAGATGGCCGTGCATCAGCAGACAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: PSVMGLLRGQSDGWP*SCGRTDGRASADSY Trigger: GTAGCTGTCTGCTGATGCACGGCCATCTGTCCGTCCACAGGAGCACGGCCATCCGTCCGACTGCCCTCGCAACAAGCCCATCACGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR CCA 90 bp | TCGAAACCCAGCGTGATGGGCTTGTTGCGAGGGCAGTCGGACGGATaGCCGTGCTCCTGTGGACGGACAGATGGCCGTGCATCAGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: SKPSVMGLLRGQSDG*PCSCGRTDGRASAD Trigger: GTCTGCTGATGCACGGCCATCTGTCCGTCCACAGGAGCACGGCCATCCGTCCGACTGCCCTCGCAACAAGCCCATCACGCTGGGTTTCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR CCA 90 bp | AGGGACGGGCTGTACAGCACCTTCCACCAGATGGGAGGGGACGCGTaGTTTCAGAAATCGCAATGGTGCCACATCTCGGACCCAATGTGG | + |
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Preference number: 1 (lower is better) Translates to: RDGLYSTFHQMGGDA*FQKSQWCHISDPMW Trigger: CCACATTGGGTCCGAGATGTGGCACCATTGCGATTTCTGAAACCACGCGTCCCCTCCCATCTGGTGGAAGGTGCTGTACAGCCCGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR TCA 90 bp | AGACAAATGTGTGGCATGGGGGCAGGGAGTTCCCTGATGGTTAGGTaGCAGGAAACCTGCTGTGTCTTCCGTGAGGTGGATGTACCCCGT | + |
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Preference number: 1 (lower is better) Translates to: RQMCGMGAGSSLMVR*QETCCVFREVDVPR Trigger: ACGGGGTACATCCACCTCACGGAAGACACAGCAGGTTTCCTGTCACCTAACCATCAGGGAACTCCCTGCCCCCATGCCACACATTTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR CCA 90 bp | ACCTTCCACCAGATGGGAGGGGACGCGTGGTTTCAGAAATCGCAATaGTGCCACATCTCGGACCCAATGTGGCATAGAGTCAATAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: TFHQMGGDAWFQKSQ*CHISDPMWHRVNSK Trigger: TTTGCTATTGACTCTATGCCACATTGGGTCCGAGATGTGGCACCATTGCGATTTCTGAAACCACGCGTCCCCTCCCATCTGGTGGAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR GCA 90 bp | TTTCTCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTaGAGTTCCAAGTATGCTGGTGTCATGCAGGTCAGCTGTCCGATG | + |
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Preference number: 1 (lower is better) Translates to: FLSHSRLCSGTQDQF*SSKYAGVMQVSCPM Trigger: CATCGGACAGCTGACCTGCATGACACCAGCATACTTGGAACTGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR GCA 90 bp | CTGGCACGCAAGACCAGTTTTGCAGTTCCAAGTATGCTGGTGTCATaGAGGTCAGCTGTCCGATGGCAAACGTTAAAATGCTCTGGACTT | + |
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Preference number: 1 (lower is better) Translates to: LARKTSFAVPSMLVS*RSAVRWQTLKCSGL Trigger: AAGTCCAGAGCATTTTAACGTTTGCCATCGGACAGCTGACCTGCATGACACCAGCATACTTGGAACTGCAAAACTGGTCTTGCGTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR GCA 90 bp | TTCCACCAGATGGGAGGGGACGCGTGGTTTCAGAAATCGCAATGGTaGCACATCTCGGACCCAATGTGGCATAGAGTCAATAGCAAAATA | + |
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Preference number: 1 (lower is better) Translates to: FHQMGGDAWFQKSQW*HISDPMWHRVNSKI Trigger: TATTTTGCTATTGACTCTATGCCACATTGGGTCCGAGATGTGGCACCATTGCGATTTCTGAAACCACGCGTCCCCTCCCATCTGGTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR TCA 90 bp | TTCGATATCCTGTGTCATTTCCTTTGGCAAGTGAGCCAGGAGCCGTaGTTCTCGAAGCATGCCAATTGTAGATCGCCAGTGGTGATTCTC | + |
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Preference number: 1 (lower is better) Translates to: FDILCHFLWQVSQEP*FSKHANCRSPVVIL Trigger: GAGAATCACCACTGGCGATCTACAATTGGCATGCTTCGAGAATCACGGCTCCTGGCTCACTTGCCAAAGGAAATGACACAGGATATCGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR CCA 90 bp | TTTGCAGTTCCAAGTATGCTGGTGTCATGCAGGTCAGCTGTCCGATaGCAAACGTTAAAATGCTCTGGACTTAGGAGCTACTGCCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: FAVPSMLVSCRSAVR*QTLKCSGLRSYCQS Trigger: TGACTGGCAGTAGCTCCTAAGTCCAGAGCATTTTAACGTTTGCCATCGGACAGCTGACCTGCATGACACCAGCATACTTGGAACTGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR CCA 90 bp | GATGGTACTCAGTTTTGGCTTGTGACCTTAGCAGGGAAGCAGAGATaGTCACTAGGGGCAGGCAGTTCAGAAAGACATCTGTCAGGATTT | + |
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Preference number: 1 (lower is better) Translates to: DGTQFWLVTLAGKQR*SLGAGSSERHLSGF Trigger: AAATCCTGACAGATGTCTTTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAGCCAAAACTGAGTACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR CCA 90 bp | GCGTGGTTTCAGAAATCGCAATGGTGCCACATCTCGGACCCAATGTaGCATAGAGTCAATAGCAAAATAATGAACCCCCTCTTAGGTTTG | + |
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Preference number: 1 (lower is better) Translates to: AWFQKSQWCHISDPM*HRVNSKIMNPLLGL Trigger: CAAACCTAAGAGGGGGTTCATTATTTTGCTATTGACTCTATGCCACATTGGGTCCGAGATGTGGCACCATTGCGATTTCTGAAACCACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR CCA 90 bp | TGCGGTATAATCCCCCGGAGAAGCCTAGATGCATGGAAGTATCTTTaGAAACTTAACAGTCGTTTCACCTTTTTCTTGGTGCCAATTTCC | + |
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Preference number: 1 (lower is better) Translates to: CGIIPRRSLDAWKYL*KLNSRFTFFLVPIS Trigger: GGAAATTGGCACCAAGAAAAAGGTGAAACGACTGTTAAGTTTCCAAAGATACTTCCATGCATCTAGGCTTCTCCGGGGGATTATACCGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR TCA 90 bp | TGTCTGTCCTGTACATTCTCCAGTCTCAAATCTTTATTGTGGAGGTaGGCTTTTAAGCGGGTCAGAAACTCATTCTGTCTGTTGATATCC | + |
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Preference number: 1 (lower is better) Translates to: CLSCTFSSLKSLLWR*AFKRVRNSFCLLIS Trigger: GGATATCAACAGACAGAATGAGTTTCTGACCCGCTTAAAAGCTCACCTCCACAATAAAGATTTGAGACTGGAGAATGTACAGGACAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCCGTGCTCCTGTGGACGGACAGATGGCCGTGCATCAGCAGACAGCTACCTTCTTCATCCAGCAGGTaGAGAGGGGCCTGCGGTATA | + |
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Preference number: 2 (lower is better) Translates to: MAVLLWTDRWPCISRQLPSSSSR*RGACGI Trigger: TATACCGCAGGCCCCTCTCCACCTGCTGGATGAAGA...AGGTAGCTGTCTGCTGATGCACGGCCATCTGTCCGTCCACAGGAGCACGGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCAGTTCCAAGTGGGCAGTCGGACGGATaGCCGTGCTCCTGTGGACGG | + |
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Preference number: 2 (lower is better) Translates to: SHTLVCALARKTSFAVPSGQSDG*PCSCGR Trigger: CCGTCCACAGGAGCACGGCCATCCGTCCGACTGCCC...ACTTGGAACTGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGACCTTAGCAGGGAAGCAGAGATGGTCACTAGGGGCAGGCAGTTCAGAAGGGTGGTCCACGTCATaGGCTGCTGCAGCCAGTAGT | + |
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Preference number: 2 (lower is better) Translates to: LVTLAGKQRWSLGAGSSEGWSTS*AAAASS Trigger: ACTACTGGCTGCAGCAGCTCATGACGTGGACCACCC...TTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR CAA 90 bp | CCCATTTCGGCAGCTAATGCTGAGGTGACAATGGCTTTTGTACACTaGGATCAACGAAGGGAGGCGGTAAGTGGCAGGCGGATGGCATCG | + |
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Preference number: 2 (lower is better) Translates to: PISAANAEVTMAFVH*DQRREAVSGRRMAS Trigger: CGATGCCATCCGCCTGCCACTTACCGCCTCCCTTCGTTGATCCAAGTGTACAAAAGCCATTGTCACCTCAGCATTAGCTGCCGAAATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR TCA 90 bp | GTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGACTTCCCTGATGGTTAGGTaGCAGGAAACCTGCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: VTVNAKETHTNRPRTKGTSLMVR*QETCCV Trigger: GACACAGCAGGTTTCCTGTCACCTAACCATCAGGGA...AGTCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | GTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGACTTGCGTCTGTGCTGATTaGACAGCAGGCTCTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: VTVNAKETHTNRPRTKGTCVCAD*TAGSST Trigger: AGTGGAAGAGCCTGCTGTCCAATCAGCACAGACGCA...AGTCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | GTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGACTTATCAGACAAATGTGTaGCATGGGGGCAGGGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: VTVNAKETHTNRPRTKGTYQTNV*HGGREF Trigger: GAACTCCCTGCCCCCATGCCACACATTTGTCTGATA...AGTCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGTGACCTTAGCAGGGAAGCAGAGATGGTCACTAGGGGCAGGCAGTTCAGAATTGATCAAAAATGGCTaGTTGACCCCTGGGTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: LVTLAGKQRWSLGAGSSELIKNG*LTPGWS Trigger: GGACCACCCAGGGGTCAACCAGCCATTTTTGATCAA...TTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR CAA 90 bp | CTTTCTCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTaGCAGTTCCAAGTATGCTGGTGTCATGCAGGTCAGCTGTCCGAT | + |
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Preference number: 2 (lower is better) Translates to: LSLTLSFVLWHARPV*QFQVCWCHAGQLSD Trigger: ATCGGACAGCTGACCTGCATGACACCAGCATACTTGGAACTGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR TCA 90 bp | GTAAATAATTCAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGGTGACGTCGGCTGCGTaGACAGCATTGTGGTATGGG | + |
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Preference number: 2 (lower is better) Translates to: VNNSVTVNAKETHTNRPRVTSAA*TALWYG Trigger: CCCATACCACAATGCTGTTCACGCAGCCGACGTCAC...CCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTGAATTATTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR GCA 90 bp | CTTGTGACCTTAGCAGGGAAGCAGAGATGGTCACTAGGGGCAGGCAGTTCAGAATTTCACTCCACTGCTTaGTCATCTCCCAGATACGAC | + |
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Preference number: 2 (lower is better) Translates to: LVTLAGKQRWSLGAGSSEFHSTA*SSPRYD Trigger: GTCGTATCTGGGAGATGAGCAAGCAGTGGAGTGAAA...TTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGAGAAGCTTGCCAACTTTaGCTCCTTCAGGTAACAGTG | + |
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Preference number: 2 (lower is better) Translates to: QLLSTPKKRTPTVHGPKGEACQL*LLQVTV Trigger: CACTGTTACCTGAAGGAGCCAAAGTTGGCAAGCTTC...TCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGACCTTAGCAGGGAAGCAGAGATGGTCACTAGGGGCAGGCAGTTCAGAACAGCTAATGCTGAGGTaGCAATGGCTTTTGTACACT | + |
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Preference number: 2 (lower is better) Translates to: LVTLAGKQRWSLGAGSSEQLMLR*QWLLYT Trigger: AGTGTACAAAAGCCATTGTCACCTCAGCATTAGCTG...TTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCGGGTCAGAAACTCATTCTGTCTGTTGATATCCGTGGCCAAGATGAGGGAGGGTGCCAATTTCCCCTaGGTGTGTTGTATCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: KRVRNSFCLLISVAKMREGANFP*VCCIFH Trigger: GTGGAAGATACAACACACTCAGGGGAAATTGGCACC...CTCCCTCATCTTGGCCACGGATATCAACAGACAGAATGAGTTTCTGACCCGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAATAATTCAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGCTGGGTGACGTCGGCTaGGTGAACAGCATTGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: VNNSVTVNAKETHTNRPRLGDVG*VNSIVV Trigger: TACCACAATGCTGTTCACGCAGCCGACGTCACCCAG...CCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTGAATTATTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGGGACTTTGGTATTGTAGCCATATCAGACAAATGTGTGGCATGGGGGCACACTGGGCTTTGTTGTaGGCGAGATGGCTTAGCATG | + |
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Preference number: 2 (lower is better) Translates to: PKGLWYCSHIRQMCGMGAHWALL*ARWLSM Trigger: CATGCTAAGCCATCTCGCGCACAACAAAGCCCAGTG...TGCCCCCATGCCACACATTTGTCTGATATGGCTACAATACCAAAGTCCCTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | CATTGGCAGTTTCCATATAACATTAATTATGCTAGAGCTCACGAAGAAAAGGCTGGGCAGTCGGACGGATaGCCGTGCTCCTGTGGACGG | + |
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Preference number: 2 (lower is better) Translates to: HWQFPYNINYARAHEEKAGQSDG*PCSCGR Trigger: CCGTCCACAGGAGCACGGCCATCCGTCCGACTGCCC...AGCCTTTTCTTCGTGAGCTCTAGCATAATTAATGTTATATGGAAACTGCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAGTTCCAAGTATGCTGGTGTCATGCAGGTCAGCTGTCCGATGGCAAACGATATCGAGCTTGAAATaGTGGATGAGCCCATGGGAG | + |
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Preference number: 2 (lower is better) Translates to: FAVPSMLVSCRSAVRWQTISSLK*WMSPWE Trigger: CTCCCATGGGCTCATCCACCATTTCAAGCTCGATAT...CGTTTGCCATCGGACAGCTGACCTGCATGACACCAGCATACTTGGAACTGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAATGACGGGATAGAGCCGCCCATTTCGGCAGCTAATGCTGAGGTGACAATGAACAGCATTGTGGTATaGGTTGTGACCGTGGTAATC | + |
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Preference number: 2 (lower is better) Translates to: SNDGIEPPISAANAEVTMNSIVV*VVTVVI Trigger: GATTACCACGGTCACAACCCATACCACAATGCTGTT...CATTGTCACCTCAGCATTAGCTGCCGAAATGGGCGGCTCTATCCCGTCATTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR TCA 90 bp | GGTACTTTCTCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCATGGGAGTTGAAGAGGTaGCACAACAGAGTTACCAGA | + |
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Preference number: 2 (lower is better) Translates to: GTFSHTLVCALARKTSFAWELKR*HNRVTR Trigger: TCTGGTAACTCTGTTGTGTCACCTCTTCAACTCCCA...TGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAGAAAGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGTGACCTTAGCAGGGAAGCAGAGATGGTCACTAGGGGCAGGCAGTTCAGAAAGTACAGACATATTCTaGTACAGGTTGGCAAGATGG | + |
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Preference number: 2 (lower is better) Translates to: LVTLAGKQRWSLGAGSSESTDIF*YRLARW Trigger: CCATCTTGCCAACCTGTATCAGAATATGTCTGTACT...TTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR GCA 90 bp | ACCCCGTGTTCCACAACAGGAGTCACAAAAACACGAGCTTCTCAGCCAGCTTGTCCGGAGAAGCCTAGATaGATGGAAGTATCTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TPCSTTGVTKTRASQPACPEKPR*MEVSLE Trigger: TTCCAAAGATACTTCCATGCATCTAGGCTTCTCCGG...ACAAGCTGGCTGAGAAGCTCGTGTTTTTGTGACTCCTGTTGTGGAACACGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGGACTTTGGTATTGTAGCCATATCAGACAAATGTGTGGCATGGGGGCATGGCTTTTGTACACTTaGATCAACGAAGGGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: PKGLWYCSHIRQMCGMGAWLLYT*INEGRR Trigger: CCGCCTCCCTTCGTTGATCCAAGTGTACAAAAGCCA...TGCCCCCATGCCACACATTTGTCTGATATGGCTACAATACCAAAGTCCCTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR CAA 90 bp | TACACTTGTGAATATAAACAGGTCACTGAATCCGTAAAAGACGGATaGGCTAACGGTGCAAAGGGACGGGCTGTACAGCACCTTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: YTCEYKQVTESVKDG*ANGAKGRAVQHLPP Trigger: TGGTGGAAGGTGCTGTACAGCCCGTCCCTTTGCACCGTTAGCCAATCCGTCTTTTACGGATTCAGTGACCTGTTTATATTCACAAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | ACCCCGTGTTCCACAACAGGAGTCACAAAAACACGAGCTTCTCAGCCAGCTTGTTCGTGTATTTTGGCATaGGAATCAGTAGCGTTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TPCSTTGVTKTRASQPACSCILA*ESVAFG Trigger: ACCAAACGCTACTGATTCCCATGCCAAAATACACGA...ACAAGCTGGCTGAGAAGCTCGTGTTTTTGTGACTCCTGTTGTGGAACACGGGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | CGTGTTCCACAACAGGAGTCACAAAAACACGAGCTTCTCAGCCAGCTTGTTAAAGATGGTACTCAGTTTTaGCTTGTGACCTTAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RVPQQESQKHELLSQLVKDGTQF*LVTLAG Trigger: CCCTGCTAAGGTCACAAGCCAAAACTGAGTACCATC...TTTAACAAGCTGGCTGAGAAGCTCGTGTTTTTGTGACTCCTGTTGTGGAACACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | GTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGACTAGAAGCCTAGATGCATaGAAGTATCTTTGGAAACTT | + |
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Preference number: 2 (lower is better) Translates to: VTVNAKETHTNRPRTKGTRSLDA*KYLWKL Trigger: AAGTTTCCAAAGATACTTCCATGCATCTAGGCTTCT...AGTCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| 3UTR-3UTR TCA 90 bp | GTAAATAATTCAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGCAGCTAATGCTGAGGTaGCAATGGCTTTTGTACACT | + |
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Preference number: 2 (lower is better) Translates to: VNNSVTVNAKETHTNRPRQLMLR*QWLLYT Trigger: AGTGTACAAAAGCCATTGTCACCTCAGCATTAGCTG...CCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTGAATTATTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGCTTGATCATGGCAGAAATGCCCCCTCTCCCACTACTTAAGATAAAGAGAAGGTCAGCTGTCCGATaGCAAACGTTAAAATGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SGLIMAEMPPLPLLKIKRRSAVR*QTLKCS Trigger: AGAGCATTTTAACGTTTGCCATCGGACAGCTGACCT...TCTCTTTATCTTAAGTAGTGGGAGAGGGGGCATTTCTGCCATGATCAAGCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR-3UTR CCA 90 bp | GTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGACTTTTCCTAAACTCCACTaGCTAAAGACAATGTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: VTVNAKETHTNRPRTKGTFPKLH*LKTMFS Trigger: AGAAAACATTGTCTTTAGCCAGTGGAGTTTAGGAAA...AGTCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR-3UTR CCA 90 bp | GTAAATAATTCAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGTCGTGTATTTTGGCATaGGAATCAGTAGCGTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: VNNSVTVNAKETHTNRPRSCILA*ESVAFG Trigger: ACCAAACGCTACTGATTCCCATGCCAAAATACACGA...CCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTGAATTATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGGCTTGATCATGGCAGAAATGCCCCCTCTCCCACTACTTAAGATAAAGAGATGTCAGGATTTAGGTTaGGCAGTTTTGGAAAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SGLIMAEMPPLPLLKIKRCQDLG*AVLERG Trigger: TCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACA...TCTCTTTATCTTAAGTAGTGGGAGAGGGGGCATTTCTGCCATGATCAAGCCACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR-3UTR CCA 90 bp | GTAAATAATTCAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGTGTCAGGATTTAGGTTaGGCAGTTTTGGAAAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: VNNSVTVNAKETHTNRPRCQDLG*AVLERG Trigger: TCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACA...CCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTGAATTATTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAGCATAAAGTGTCTGTCCTGTACATTCTCCAGTCTCAAATCTTTATTGTGTGGCTTTTGTACACTTaGATCAACGAAGGGAGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: LKHKVSVLYILQSQIFIVWLLYT*INEGRR Trigger: CCGCCTCCCTTCGTTGATCCAAGTGTACAAAAGCCA...CACAATAAAGATTTGAGACTGGAGAATGTACAGGACAGACACTTTATGCTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR CAA 90 bp | AAAAACACGAGCTTCTCAGCCAGCTTGTTAAAACTGTGTGCAGCATaGCTGTGCTGGAAAGTGATTTACATCTTGCTCATTAATCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KNTSFSASLLKLCAA*LCWKVIYILLINLR Trigger: CCTCAGATTAATGAGCAAGATGTAAATCACTTTCCAGCACAGCAATGCTGCACACAGTTTTAACAAGCTGGCTGAGAAGCTCGTGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCATTGTTTATACAGGTAGCAATCCCATAATACTCGTGTATTTTGGCATGGGAGTAAGAGCTAGCTGTTaGTGTCAGTTTGAGAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AIVYTGSNPIILVYFGMGVRASC*CQFEKW Trigger: CCACTTCTCAAACTGACAGCAACAGCTAGCTCTTAC...TCCCATGCCAAAATACACGAGTATTATGGGATTGCTACCTGTATAAACAATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR-3UTR CCA 90 bp | AAAGACATCTGTCAGGATTTAGGTTGGGCAGTTTTGGAAAGAGGAAAAATGTTTTCGAGCTTGAAATGGTaGATGAGCCCATGGGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: KDICQDLGWAVLERGKMFSSLKW*MSPWEL Trigger: CAACTCCCATGGGCTCATCCACCATTTCAAGCTCGA...AAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACAGATGTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAAAGGGACTTTGGTATTGTAGCCATATCAGACAAATGTGTGGCATGGGGGCAAGGTTGGCAAGATGGTaGTTAGTTTTGATCAAAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PKGLWYCSHIRQMCGMGARLARW*LVLIKN Trigger: ATTTTTGATCAAAACTAACCACCATCTTGCCAACCT...TGCCCCCATGCCACACATTTGTCTGATATGGCTACAATACCAAAGTCCCTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR-3UTR GCA 90 bp | CATTGGCAGTTTCCATATAACATTAATTATGCTAGAGCTCACGAAGAAAAGGCTTTGCAGTTCCAAGTATaGTGGTGTCATGCAGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: HWQFPYNINYARAHEEKALQFQV*WCHAGQ Trigger: CTGACCTGCATGACACCAGCATACTTGGAACTGCAA...AGCCTTTTCTTCGTGAGCTCTAGCATAATTAATGTTATATGGAAACTGCCAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR-3UTR GCA 90 bp | GCCATTGTTTATACAGGTAGCAATCCCATAATACTCGTGTATTTTGGCATGGGATGTGCAGCATTGCTGTaGTGGAAAGTGATTTACATC | + |
|
Preference number: 2 (lower is better) Translates to: AIVYTGSNPIILVYFGMGCAALL*WKVIYI Trigger: GATGTAAATCACTTTCCAGCACAGCAATGCTGCACA...TCCCATGCCAAAATACACGAGTATTATGGGATTGCTACCTGTATAAACAATGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR CAA 90 bp | CAGGCAGTTCAGAAAGACATCTGTCAGGATTTAGGTTGGGCAGTTTaGGAAAGAGGAAAAATGTTTAAAGTTAAGGCCTTTATCTGCGAA | + |
|
Preference number: 2 (lower is better) Translates to: QAVQKDICQDLGWAV*ERGKMFKVKAFICE Trigger: TTCGCAGATAAAGGCCTTAACTTTAAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACAGATGTCTTTCTGAACTGCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR CCA 90 bp | CATAAAGTGTCTGTCCTGTACATTCTCCAGTCTCAAATCTTTATTGTGGAGGTGGCATGGAAGTATCTTTaGAAACTTAACAGTCGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HKVSVLYILQSQIFIVEVAWKYL*KLNSRF Trigger: GAAACGACTGTTAAGTTTCCAAAGATACTTCCATGC...CACCTCCACAATAAAGATTTGAGACTGGAGAATGTACAGGACAGACACTTTATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGACATCTGTCAGGATTTAGGTTGGGCAGTTTTGGAAAGAGGAAAAATGTTTTGCTGTGCTGGAAAGTaGTTTACATCTTGCTCATTA | + |
|
Preference number: 2 (lower is better) Translates to: KDICQDLGWAVLERGKMFCCAGK*FTSCSL Trigger: TAATGAGCAAGATGTAAATCACTTTCCAGCACAGCA...AAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACAGATGTCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGACATCTGTCAGGATTTAGGTTGGGCAGTTTTGGAAAGAGGAAAAATGTTTAGATACGACAAGGATTaGAAATGTCAGCACACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: KDICQDLGWAVLERGKMFRYDKD*KCQHTS Trigger: TGAAGTGTGCTGACATTTGCAATCCTTGTCGTATCT...AAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACAGATGTCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR GCA 72 bp | GGGCGTGGCACCTTCTGTCTGCTCCAGGGTCTCAGGTaGGGGGCCCGCCAGGTCCTGGCCGCTGCCCCTGCG | + |
|
Preference number: 3 (lower is better) Translates to: GRGTFCLLQGLR*GARQVLAAAPA Trigger: CGCAGGGGCAGCGGCCAGGACCTGGCGGGCCCCGCACCTGAGACCCTGGAGCAGACAGAAGGTGCCACGCCC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR GCA 72 bp | GGGTCTCAGGTGCGGGGCCCGCCAGGTCCTGGCCGCTaGCCCTGCGTCTGTGCTGATTGGACAGCAGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GSQVRGPPGPGR*PCVCADWTAGS Trigger: AGAGCCTGCTGTCCAATCAGCACAGACGCAGGGGCAGCGGCCAGGACCTGGCGGGCCCCGCACCTGAGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | AGCGTGATGGGCTTGTTGCGAGGGCAGTCGGACGGATaGCCGTGCTCCTGTGGACGGACAGATGGCCGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SVMGLLRGQSDG*PCSCGRTDGRA Trigger: TGCACGGCCATCTGTCCGTCCACAGGAGCACGGCCATCCGTCCGACTGCCCTCGCAACAAGCCCATCACGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | GTTGCGAGGGCAGTCGGACGGATGGCCGTGCTCCTGTaGACGGACAGATGGCCGTGCATCAGCAGACAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: VARAVGRMAVLL*TDRWPCISRQL Trigger: TAGCTGTCTGCTGATGCACGGCCATCTGTCCGTCCACAGGAGCACGGCCATCCGTCCGACTGCCCTCGCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | CAGAAGCACCCCTTTCTTACTTCCAGGCGTTTCGGTTaGGGCAGCCGCCCCAGAATCAGCTCCAATGACGGG | + |
|
Preference number: 3 (lower is better) Translates to: QKHPFLTSRRFG*GSRPRISSNDG Trigger: CCCGTCATTGGAGCTGATTCTGGGGCGGCTGCCCCAACCGAAACGCCTGGAAGTAAGAAAGGGGTGCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR TCA 72 bp | AAATGCTCTGGACTTAGGAGCTACTGCCAGTCAGCGTaGCCAAGGGCCAGAGGCGAACACGGCAGAAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: KCSGLRSYCQSA*PRARGEHGRST Trigger: GGTGCTTCTGCCGTGTTCGCCTCTGGCCCTTGGTCACGCTGACTGGCAGTAGCTCCTAAGTCCAGAGCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR TCA 72 bp | TGTGGCATGGGGGCAGGGAGTTCCCTGATGGTTAGGTaGCAGGAAACCTGCTGTGTCTTCCGTGAGGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CGMGAGSSLMVR*QETCCVFREVD Trigger: ATCCACCTCACGGAAGACACAGCAGGTTTCCTGTCACCTAACCATCAGGGAACTCCCTGCCCCCATGCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | TGCAAAGGGACGGGCTGTACAGCACCTTCCACCAGATaGGAGGGGACGCGTGGTTTCAGAAATCGCAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: CKGTGCTAPSTR*EGTRGFRNRNG Trigger: ACCATTGCGATTTCTGAAACCACGCGTCCCCTCCCATCTGGTGGAAGGTGCTGTACAGCCCGTCCCTTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | AGCAGGCTCTTCCACTGGGCTTTGTTGTGCGCGAGATaGCTTAGCATGTTCTCCGACAGGGTGCTGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SRLFHWALLCAR*LSMFSDRVLFP Trigger: TGGGAACAGCACCCTGTCGGAGAACATGCTAAGCCATCTCGCGCACAACAAAGCCCAGTGGAAGAGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR TCA 72 bp | AAAAATGGCTGGTTGACCCCTGGGTGGTCCACGTCATaGGCTGCTGCAGCCAGTAGTCCAAGCATGATGTCC | + |
|
Preference number: 3 (lower is better) Translates to: KNGWLTPGWSTS*AAAASSPSMMS Trigger: GGACATCATGCTTGGACTACTGGCTGCAGCAGCTCATGACGTGGACCACCCAGGGGTCAACCAGCCATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR GCA 72 bp | CTCTGGCACGCAAGACCAGTTTTGCAGTTCCAAGTATaGTGGTGTCATGCAGGTCAGCTGTCCGATGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LWHARPVLQFQV*WCHAGQLSDGK Trigger: TTTGCCATCGGACAGCTGACCTGCATGACACCAGCATACTTGGAACTGCAAAACTGGTCTTGCGTGCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR GCA 72 bp | CACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTaGAGTTCCAAGTATGCTGGTGTCATGCAGGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSRLCSGTQDQF*SSKYAGVMQVS Trigger: GCTGACCTGCATGACACCAGCATACTTGGAACTGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGCGGGTCAGAAACTCATTCTGTCTGTTGATATCCGTGGCCAAGATGAGGGAGCTCTCACACTCTCGTTaGTGCTCTGGCACGCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: KRVRNSFCLLISVAKMRELSHSR*CSGTQD Trigger: GTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAG...CTCCCTCATCTTGGCCACGGATATCAACAGACAGAATGAGTTTCTGACCCGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGTGACCTTAGCAGGGAAGCAGAGATGGTCACTAGGGGCAGGCAGTTCAGAAGTCACCATATCGAGCTaGAAATGGTGGATGAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LVTLAGKQRWSLGAGSSEVTISS*KWWMSP Trigger: TGGGCTCATCCACCATTTCAAGCTCGATATGGTGAC...TTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR TCA 72 bp | CTGTGTCATTTCCTTTGGCAAGTGAGCCAGGAGCCGTaGTTCTCGAAGCATGCCAATTGTAGATCGCCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LCHFLWQVSQEP*FSKHANCRSPV Trigger: CACTGGCGATCTACAATTGGCATGCTTCGAGAATCACGGCTCCTGGCTCACTTGCCAAAGGAAATGACACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR GCA 72 bp | CTGTTGATATCCGTGGCCAAGATGAGGGAGCCCAGCTaGTGTTCGATATCCTGTGTCATTTCCTTTGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LLISVAKMREPS*CSISCVISFGK Trigger: CTTGCCAAAGGAAATGACACAGGATATCGAACAGCAGCTGGGCTCCCTCATCTTGGCCACGGATATCAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | CAGTTTTGGCTTGTGACCTTAGCAGGGAAGCAGAGATaGTCACTAGGGGCAGGCAGTTCAGAAAGACATCTG | + |
|
Preference number: 3 (lower is better) Translates to: QFWLVTLAGKQR*SLGAGSSERHL Trigger: CAGATGTCTTTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAGCCAAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | TTAGGTGACAGGAAACCTGCTGTGTCTTCCGTGAGGTaGATGTACCCCGTGTTCCACAACAGGAGTCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGDRKPAVSSVR*MYPVFHNRSHK Trigger: TTTGTGACTCCTGTTGTGGAACACGGGGTACATCCACCTCACGGAAGACACAGCAGGTTTCCTGTCACCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTACTTTCTCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCATGGCTTTTGTACACTaGGATCAACGAAGGGAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: RYFLSHSRLCSGTQDQFCMAFVH*DQRREA Trigger: CGCCTCCCTTCGTTGATCCAAGTGTACAAAAGCCAT...GCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAGAAAGTACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | CCAAGTATGCTGGTGTCATGCAGGTCAGCTGTCCGATaGCAAACGTTAAAATGCTCTGGACTTAGGAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: PSMLVSCRSAVR*QTLKCSGLRSY Trigger: GTAGCTCCTAAGTCCAGAGCATTTTAACGTTTGCCATCGGACAGCTGACCTGCATGACACCAGCATACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | GCCTGCGGTATAATCCCCCGGAGAAGCCTAGATGCATaGAAGTATCTTTGGAAACTTAACAGTCGTTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: ACGIIPRRSLDA*KYLWKLNSRFT Trigger: GGTGAAACGACTGTTAAGTTTCCAAAGATACTTCCATGCATCTAGGCTTCTCCGGGGGATTATACCGCAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCAGTTCCAAGTCTGTTCACAGTGCCATaGTTTATACAGGTAGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: SHTLVCALARKTSFAVPSLFTVP*FIQVAI Trigger: GATTGCTACCTGTATAAACAATGGCACTGTGAACAG...ACTTGGAACTGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGACTTTAGGTTGGGCAGTTTaGGAAAGAGGAAAAATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VTVNAKETHTNRPRTKGTLGWAV*ERGKMF Trigger: AAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAA...AGTCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCATTGTTTATACAGGTAGCAATCCCATAATACTCGTGTATTTTGGCATGGGAATCAAAAATGGCTGGTaGACCCCTGGGTGGTCCACG | + |
|
Preference number: 3 (lower is better) Translates to: AIVYTGSNPIILVYFGMGIKNGW*TPGWST Trigger: CGTGGACCACCCAGGGGTCAACCAGCCATTTTTGAT...TCCCATGCCAAAATACACGAGTATTATGGGATTGCTACCTGTATAAACAATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGGGACTTTGGTATTGTAGCCATATCAGACAAATGTGTGGCATGGGGGCACAGATACGACAAGGATaGCAAATGTCAGCACACTTC | + |
|
Preference number: 3 (lower is better) Translates to: PKGLWYCSHIRQMCGMGAQIRQG*QMSAHF Trigger: GAAGTGTGCTGACATTTGCAATCCTTGTCGTATCTG...TGCCCCCATGCCACACATTTGTCTGATATGGCTACAATACCAAAGTCCCTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCATTGTTTATACAGGTAGCAATCCCATAATACTCGTGTATTTTGGCATGGGATTCCACTGGGCTTTGTaGTGCGCGAGATGGCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: AIVYTGSNPIILVYFGMGFHWAL*CARWLS Trigger: GCTAAGCCATCTCGCGCACAACAAAGCCCAGTGGAA...TCCCATGCCAAAATACACGAGTATTATGGGATTGCTACCTGTATAAACAATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR CCA 72 bp | CAGAAATCGCAATGGTGCCACATCTCGGACCCAATGTaGCATAGAGTCAATAGCAAAATAATGAACCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QKSQWCHISDPM*HRVNSKIMNPL Trigger: GAGGGGGTTCATTATTTTGCTATTGACTCTATGCCACATTGGGTCCGAGATGTGGCACCATTGCGATTTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGCAGTTTCCATATAACATTAATTATGCTAGAGCTCACGAAGAAAAGGCTCTCTCACACTCTCGTTaGTGCTCTGGCACGCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: HWQFPYNINYARAHEEKALSHSR*CSGTQD Trigger: GTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAG...AGCCTTTTCTTCGTGAGCTCTAGCATAATTAATGTTATATGGAAACTGCCAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR CCA 72 bp | ATCCCCCGGAGAAGCCTAGATGCATGGAAGTATCTTTaGAAACTTAACAGTCGTTTCACCTTTTTCTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: IPRRSLDAWKYL*KLNSRFTFFLV Trigger: CACCAAGAAAAAGGTGAAACGACTGTTAAGTTTCCAAAGATACTTCCATGCATCTAGGCTTCTCCGGGGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR GCA 72 bp | AAACACGAGCTTCTCAGCCAGCTTGTTAAAACTGTGTaGAGCATTGCTGTGCTGGAAAGTGATTTACATCTT | + |
|
Preference number: 3 (lower is better) Translates to: KHELLSQLVKTV*SIAVLESDLHL Trigger: AAGATGTAAATCACTTTCCAGCACAGCAATGCTGCACACAGTTTTAACAAGCTGGCTGAGAAGCTCGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR GCA 72 bp | GCAGGAATCTTTCTGCTGTATTCTCATGTGAGGCCTTaGTTAAGTTCAGAGCTTCAGAATACCATAGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: AGIFLLYSHVRP*LSSELQNTIAM Trigger: CATTGCTATGGTATTCTGAAGCTCTGAACTTAAGCAAGGCCTCACATGAGAATACAGCAGAAAGATTCCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR CCA 72 bp | GCCAGCTTGTTAAAACTGTGTGCAGCATTGCTGTGCTaGAAAGTGATTTACATCTTGCTCATTAATCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ASLLKLCAALLC*KVIYILLINLR Trigger: CCTCAGATTAATGAGCAAGATGTAAATCACTTTCCAGCACAGCAATGCTGCACACAGTTTTAACAAGCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR TCA 72 bp | TGTACATTCTCCAGTCTCAAATCTTTATTGTGGAGGTaGGCTTTTAAGCGGGTCAGAAACTCATTCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CTFSSLKSLLWR*AFKRVRNSFCL Trigger: CAGACAGAATGAGTTTCTGACCCGCTTAAAAGCTCACCTCCACAATAAAGATTTGAGACTGGAGAATGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR GCA 72 bp | TCAGCCAGCTTGTTAAAACTGTGTGCAGCATTGCTGTaGTGGAAAGTGATTTACATCTTGCTCATTAATCTG | + |
|
Preference number: 3 (lower is better) Translates to: SASLLKLCAALL*WKVIYILLINL Trigger: CAGATTAATGAGCAAGATGTAAATCACTTTCCAGCACAGCAATGCTGCACACAGTTTTAACAAGCTGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR GCA 72 bp | ATTAATTATGCTAGAGCTCACGAAGAAAAGGCTCAATaGATAGTTCAGCTGGGTAAGAATGCGTACACACTG | + |
|
Preference number: 3 (lower is better) Translates to: INYARAHEEKAQ*IVQLGKNAYTL Trigger: CAGTGTGTACGCATTCTTACCCAGCTGAACTATGCATTGAGCCTTTTCTTCGTGAGCTCTAGCATAATTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR-3UTR CAA 90 bp | AAAGACATCTGTCAGGATTTAGGTTGGGCAGTTTTGGAAAGAGGAAAAATGTTTCTGTTCACAGTGCCATaGTTTATACAGGTAGCAATC | + |
|
Preference number: 3 (lower is better) Translates to: KDICQDLGWAVLERGKMFLFTVP*FIQVAI Trigger: GATTGCTACCTGTATAAACAATGGCACTGTGAACAG...AAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACAGATGTCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR TCA 72 bp | AAACCAATTTGTATGCTAGGGATTGAATCTTTCTGTTaGTTACAAAGAGGACTGATTTCCAGTTCAAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: KPICMLGIESFC*LQRGLISSSNF Trigger: GAAGTTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGATTCAATCCCTAGCATACAAATTGGTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| CDS-3UTR GCA 90 bp | GGTACTTTCTCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCACAGGGTAGCGGCCCCTaGTGGCACCCCGGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTFSHTLVCALARKTSFAQGSGP*WHPGLL Trigger: CAGCAGGCCGGGGTGCCAGCAGGGGCCGCTACCCTG...TGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAGAAAGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTCTTACTTCCAGGCGTTTCGGTTGGGGCAGCCGCCCCAGAATCAGCTCCACTGGGTGACGTCGGCTaGGTGAACAGCATTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFLLPGVSVGAAAPESAPLGDVG*VNSIVV Trigger: TACCACAATGCTGTTCACGCAGCCGACGTCACCCAG...TGGAGCTGATTCTGGGGCGGCTGCCCCAACCGAAACGCCTGGAAGTAAGAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTTACTTCCAGGCGTTTCGGTTGGGGCAGCCGCCCCAGAATCAGCTCCAACGGAAGTCAATGAATaGGTAGGAGCCACGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFLLPGVSVGAAAPESAPTEVNE*VGATAF Trigger: GAACGCCGTGGCTCCTACCCATTCATTGACTTCCGT...TGGAGCTGATTCTGGGGCGGCTGCCCCAACCGAAACGCCTGGAAGTAAGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| CDS-3UTR TCA 90 bp | TCCAATGACGGGATAGAGCCGCCCATTTCGGCAGCTAATGCTGAGGTGACAATGGCAGGAACCCCCGTCTaGCCCCTTAGTCGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SNDGIEPPISAANAEVTMAGTPV*PLSRTS Trigger: AGATGTACGACTAAGGGGTCAGACGGGGGTTCCTGC...CATTGTCACCTCAGCATTAGCTGCCGAAATGGGCGGCTCTATCCCGTCATTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| CDS-3UTR GCA 90 bp | ACCCCGTGTTCCACAACAGGAGTCACAAAAACACGAGCTTCTCAGCCAGCTTGTAGGTGGAGAGGGGCCTaGGGTATAATCCCCCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPCSTTGVTKTRASQPACRWRGA*GIIPRR Trigger: TCTCCGGGGGATTATACCGCAGGCCCCTCTCCACCT...ACAAGCTGGCTGAGAAGCTCGTGTTTTTGTGACTCCTGTTGTGGAACACGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR TCA 90 bp | GTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGACTGTAGACGGAAGTCAATaGATGGGTAGGAGCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTVNAKETHTNRPRTKGTVDGSQ*MGRSHG Trigger: GCCGTGGCTCCTACCCATTCATTGACTTCCGTCTAC...AGTCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| CDS-3UTR TCA 90 bp | CGTGTTCCACAACAGGAGTCACAAAAACACGAGCTTCTCAGCCAGCTTGTTAAAACCCCGGCCTGCTGCTaGGGGAAGAGGGTAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RVPQQESQKHELLSQLVKTPACC*GKRVAQ Trigger: CTGTGCTACCCTCTTCCCTCAGCAGCAGGCCGGGGT...TTTAACAAGCTGGCTGAGAAGCTCGTGTTTTTGTGACTCCTGTTGTGGAACACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| CDS-3UTR GCA 90 bp | GACAACAATTCCAAGCTGCGTCTGCTGGCTGCAGCTGTGATGAACCACATTAATCCTGGCCGCTGCCCCTaGGTCTGTGCTGATTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DNNSKLRLLAAAVMNHINPGRCP*VCADWT Trigger: TGTCCAATCAGCACAGACGCAGGGGCAGCGGCCAGG...ATTAATGTGGTTCATCACAGCTGCAGCCAGCAGACGCAGCTTGGAATTGTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR CAA 72 bp | GCAGCTAATGCTGAGGTGACAATGGCTTTTGTACACTaGGATCAACGAAGGGAGGCGGTAAGTGGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AANAEVTMAFVH*DQRREAVSGRR Trigger: CCGCCTGCCACTTACCGCCTCCCTTCGTTGATCCAAGTGTACAAAAGCCATTGTCACCTCAGCATTAGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| CDS-3UTR GCA 90 bp | TCCAATGACGGGATAGAGCCGCCCATTTCGGCAGCTAATGCTGAGGTGACAATGATGAGGGAGCCCAGCTaGTGTTCGATATCCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SNDGIEPPISAANAEVTMMREPS*CSISCV Trigger: GACACAGGATATCGAACAGCAGCTGGGCTCCCTCAT...CATTGTCACCTCAGCATTAGCTGCCGAAATGGGCGGCTCTATCCCGTCATTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR GCA 90 bp | CCCAGATACGACAAGGATTGCAAATGTCAGCACACTTCAAGGCGATCTGAAGCAGGGCCGTCCACCTCCTaGCTAGTTCTGCAGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRYDKDCKCQHTSRRSEAGPSTS*LVLQSG Trigger: TCCACTCTGCAGAACTAGGCAGGAGGTGGACGGCCC...TGCTTCAGATCGCCTTGAAGTGTGCTGACATTTGCAATCCTTGTCGTATCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTGACCTTAGCAGGGAAGCAGAGATGGTCACTAGGGGCAGGCAGTTCAGAACTGTGTCATTTCCTTTaGCAAGTGAGCCAGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LVTLAGKQRWSLGAGSSELCHFL*QVSQEP Trigger: CGGCTCCTGGCTCACTTGCCAAAGGAAATGACACAG...TTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR TCA 90 bp | CGTGTTCCACAACAGGAGTCACAAAAACACGAGCTTCTCAGCCAGCTTGTTAAAGGGTGGTCCACGTCATaGGCTGCTGCAGCCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVPQQESQKHELLSQLVKGWSTS*AAAASS Trigger: ACTACTGGCTGCAGCAGCTCATGACGTGGACCACCC...TTTAACAAGCTGGCTGAGAAGCTCGTGTTTTTGTGACTCCTGTTGTGGAACACG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | CTTGTGACCTTAGCAGGGAAGCAGAGATGGTCACTAGGGGCAGGCAGTTCAGAAGAATGCCTCTCGGTTTaGTTGCCTGTAGCTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVTLAGKQRWSLGAGSSEECLSV*LPVAHF Trigger: AAAGTGAGCTACAGGCAACCAAACCGAGAGGCATTC...TTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| 3UTR CAA 72 bp | ACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTaGCAGTTCCAAGTATGCTGGTGTCATGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSFVLWHARPV*QFQVCWCHAGQ Trigger: CTGACCTGCATGACACCAGCATACTTGGAACTGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| CDS-3UTR TCA 90 bp | GTAAATAATTCAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGGTAGACGGAAGTCAATaGATGGGTAGGAGCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: VNNSVTVNAKETHTNRPRVDGSQ*MGRSHG Trigger: GCCGTGGCTCCTACCCATTCATTGACTTCCGTCTAC...CCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTGAATTATTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| CDS-3UTR TCA 90 bp | CCCATTTCGGCAGCTAATGCTGAGGTGACAATGGCTTTTGTACACTTGGATCAAGTGAGCCAGGAGCCGTaGTTCTCGAAGCATGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PISAANAEVTMAFVHLDQVSQEP*FSKHAN Trigger: ATTGGCATGCTTCGAGAATCACGGCTCCTGGCTCAC...TTGATCCAAGTGTACAAAAGCCATTGTCACCTCAGCATTAGCTGCCGAAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR TCA 90 bp | TCCAATGACGGGATAGAGCCGCCCATTTCGGCAGCTAATGCTGAGGTGACAATGTCTTTATTGTGGAGGTaGGCTTTTAAGCGGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SNDGIEPPISAANAEVTMSLLWR*AFKRVR Trigger: TCTGACCCGCTTAAAAGCTCACCTCCACAATAAAGA...CATTGTCACCTCAGCATTAGCTGCCGAAATGGGCGGCTCTATCCCGTCATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR GCA 90 bp | GGTACTTTCTCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCAGGAGAGCATGTGCCTTaGTTGTCCAAGGTAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTFSHTLVCALARKTSFAGEHVP*LSKVVF Trigger: GAAGACTACCTTGGACAAGCAAGGCACATGCTCTCC...TGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAGAAAGTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | CAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGAAACAGCATTGTGGTATaGGTTGTGACCGTGGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: QLLSTPKKRTPTVHGPKGNSIVV*VVTVVI Trigger: GATTACCACGGTCACAACCCATACCACAATGCTGTT...TCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTTACTTCCAGGCGTTTCGGTTGGGGCAGCCGCCCCAGAATCAGCTCCATACAGGTTGGCAAGATaGTGGTTAGTTTTGATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PFLLPGVSVGAAAPESAPYRLAR*WLVLIK Trigger: TTTGATCAAAACTAACCACCATCTTGCCAACCTGTA...TGGAGCTGATTCTGGGGCGGCTGCCCCAACCGAAACGCCTGGAAGTAAGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | TCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCAGTTCCAAGTCCTAGTTCTGCAGAGTaGAAGTACCGCTCTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SHTLVCALARKTSFAVPSPSSAE*KYRSST Trigger: TGTGCTAGAGCGGTACTTCCACTCTGCAGAACTAGG...ACTTGGAACTGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGAAGTACAGACATATTCTaGTACAGGTTGGCAAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLSTPKKRTPTVHGPKGSTDIF*YRLARW Trigger: CCATCTTGCCAACCTGTATCAGAATATGTCTGTACT...TCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR GCA 90 bp | TTTGCAGTTCCAAGTATGCTGGTGTCATGCAGGTCAGCTGTCCGATGGCAAACGCCGGAGAAGCCTAGATaGATGGAAGTATCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FAVPSMLVSCRSAVRWQTPEKPR*MEVSLE Trigger: TTCCAAAGATACTTCCATGCATCTAGGCTTCTCCGG...CGTTTGCCATCGGACAGCTGACCTGCATGACACCAGCATACTTGGAACTGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGGACTTTGGTATTGTAGCCATATCAGACAAATGTGTGGCATGGGGGCATCGAGCTTGAAATGGTaGATGAGCCCATGGGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PKGLWYCSHIRQMCGMGASSLKW*MSPWEL Trigger: CAACTCCCATGGGCTCATCCACCATTTCAAGCTCGA...TGCCCCCATGCCACACATTTGTCTGATATGGCTACAATACCAAAGTCCCTTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | CGTGTTCCACAACAGGAGTCACAAAAACACGAGCTTCTCAGCCAGCTTGTTAAATGCGTCTGTGCTGATTaGACAGCAGGCTCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RVPQQESQKHELLSQLVKCVCAD*TAGSST Trigger: AGTGGAAGAGCCTGCTGTCCAATCAGCACAGACGCA...TTTAACAAGCTGGCTGAGAAGCTCGTGTTTTTGTGACTCCTGTTGTGGAACACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| 3UTR CAA 72 bp | GAATATAAACAGGTCACTGAATCCGTAAAAGACGGATaGGCTAACGGTGCAAAGGGACGGGCTGTACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EYKQVTESVKDG*ANGAKGRAVQH Trigger: GTGCTGTACAGCCCGTCCCTTTGCACCGTTAGCCAATCCGTCTTTTACGGATTCAGTGACCTGTTTATATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| 3UTR CAA 72 bp | ATAACCAGAAACCTGTGCAAGGTCACCATATCGAGCTaGAAATGGTGGATGAGCCCATGGGAGTTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITRNLCKVTISS*KWWMSPWELKR Trigger: CCTCTTCAACTCCCATGGGCTCATCCACCATTTCAAGCTCGATATGGTGACCTTGCACAGGTTTCTGGTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| CDS-3UTR TCA 90 bp | AGCAATCCCATAATACTCGTGTATTTTGGCATGGGAATCAGTAGCGTTTGGTATGCAGGAACCCCCGTCTaGCCCCTTAGTCGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: SNPIILVYFGMGISSVWYAGTPV*PLSRTS Trigger: AGATGTACGACTAAGGGGTCAGACGGGGGTTCCTGC...ATACCAAACGCTACTGATTCCCATGCCAAAATACACGAGTATTATGGGATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
||
| CDS-3UTR TCA 90 bp | AGGTACTTTCTCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCGGTGCCAATTTCCCCTaGGTGTGTTGTATTGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RYFLSHSRLCSGTQDQFCGANFP*VCCIVK Trigger: CTTAACAATACAACACACTCAGGGGAAATTGGCACC...GCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAGAAAGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | AGTGGCTTGATCATGGCAGAAATGCCCCCTCTCCCACTACTTAAGATAAAGAGATTGTTGTGCGCGAGATaGCTTAGCATGTTCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGLIMAEMPPLPLLKIKRLLCAR*LSMFSD Trigger: GTCGGAGAACATGCTAAGCCATCTCGCGCACAACAA...TCTCTTTATCTTAAGTAGTGGGAGAGGGGGCATTTCTGCCATGATCAAGCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR TCA 90 bp | AGTGGCTTGATCATGGCAGAAATGCCCCCTCTCCCACTACTTAAGATAAAGAGAGTAGATCGCCAGTGGTaGTTCTCCAGTACAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: SGLIMAEMPPLPLLKIKRVDRQW*FSSTDI Trigger: TATGTCTGTACTGGAGAATCACCACTGGCGATCTAC...TCTCTTTATCTTAAGTAGTGGGAGAGGGGGCATTTCTGCCATGATCAAGCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR GCA 90 bp | TTTGGGTACGCAGAGTATTACTTGTCCAAAGTTTTAGACCCATTGTCTGGTGCACACTGGGCTTTGTTGTaGGCGAGATGGCTTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FGYAEYYLSKVLDPLSGAHWALL*ARWLSM Trigger: CATGCTAAGCCATCTCGCGCACAACAAAGCCCAGTG...TGCACCAGACAATGGGTCTAAAACTTTGGACAAGTAATACTCTGCGTACCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR GCA 90 bp | TTCCAACTTTGGAGAGCATGTGCCTTGCTTGTCCAAGGTAGTCTTCATCCAGCACTTCATTTTCCAGAATaGCTCTCGGTTTGGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FQLWRACALLVQGSLHPALHFPE*LSVWLP Trigger: AGGCAACCAAACCGAGAGGCATTCTGGAAAATGAAG...TGCTGGATGAAGACTACCTTGGACAAGCAAGGCACATGCTCTCCAAAGTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTTCCACAACAGGAGTCACAAAAACACGAGCTTCTCAGCCAGCTTGTTAAAGAAGCTTGCCAACTTTaGCTCCTTCAGGTAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVPQQESQKHELLSQLVKEACQL*LLQVTV Trigger: CACTGTTACCTGAAGGAGCCAAAGTTGGCAAGCTTC...TTTAACAAGCTGGCTGAGAAGCTCGTGTTTTTGTGACTCCTGTTGTGGAACACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | GCCATTGTTTATACAGGTAGCAATCCCATAATACTCGTGTATTTTGGCATGGGAAGCAGGCTCTTCCACTaGGCTTTGTTGTGCGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AIVYTGSNPIILVYFGMGSRLFH*ALLCAR Trigger: TCTCGCGCACAACAAAGCCCAGTGGAAGAGCCTGCT...TCCCATGCCAAAATACACGAGTATTATGGGATTGCTACCTGTATAAACAATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | GGTACTTTCTCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCACCTGTAGCTCACTTTTaGACTTCCAAACCAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GTFSHTLVCALARKTSFAPVAHF*TSKPAL Trigger: TAAAGCTGGTTTGGAAGTCCAAAAGTGAGCTACAGG...TGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAGAAAGTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| CDS-3UTR TCA 90 bp | AAAGACATCTGTCAGGATTTAGGTTGGGCAGTTTTGGAAAGAGGAAAAATGTTTGTGACGTCGGCTGCGTaGACAGCATTGTGGTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KDICQDLGWAVLERGKMFVTSAA*TALWYG Trigger: CCCATACCACAATGCTGTTCACGCAGCCGACGTCAC...AAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACAGATGTCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR TCA 90 bp | AGCAATCCCATAATACTCGTGTATTTTGGCATGGGAATCAGTAGCGTTTGGTATCCAGCTTTACCATCCTaGTCATCTCTGGCAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SNPIILVYFGMGISSVWYPALPS*SSLASP Trigger: GGGACTTGCCAGAGATGATCAGGATGGTAAAGCTGG...ATACCAAACGCTACTGATTCCCATGCCAAAATACACGAGTATTATGGGATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
||
| CDS-3UTR GCA 90 bp | GGTACTTTCTCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCAAGATACGACAAGGATTaGAAATGTCAGCACACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTFSHTLVCALARKTSFARYDKD*KCQHTS Trigger: TGAAGTGTGCTGACATTTGCAATCCTTGTCGTATCT...TGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGAGAAAGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
||
| CDS-3UTR CCA 90 bp | AGCAATCCCATAATACTCGTGTATTTTGGCATGGGAATCAGTAGCGTTTGGTATACGGAAGTCAATGAATaGGTAGGAGCCACGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SNPIILVYFGMGISSVWYTEVNE*VGATAF Trigger: GAACGCCGTGGCTCCTACCCATTCATTGACTTCCGT...ATACCAAACGCTACTGATTCCCATGCCAAAATACACGAGTATTATGGGATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR CAA 72 bp | AACAGGAGTCACAAAAACACGAGCTTCTCAGCCAGCTaGTTAAAACTGTGTGCAGCATTGCTGTGCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRSHKNTSFSAS*LKLCAALLCWK Trigger: TTTCCAGCACAGCAATGCTGCACACAGTTTTAACAAGCTGGCTGAGAAGCTCGTGTTTTTGTGACTCCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| CDS-3UTR TCA 90 bp | AAAACTAACAGTATTCTGTTCACAGTGCCATTGTTTATACAGGTAGCAATCCCATCAAAAATGGCTGGTTaGCCCCTGGGTGGTCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KTNSILFTVPLFIQVAIPSKMAG*PLGGPR Trigger: ACGTGGACCACCCAGGGGTCAACCAGCCATTTTTGA...TGGGATTGCTACCTGTATAAACAATGGCACTGTGAACAGAATACTGTTAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CCA 90 bp | TCTCACACTCTCGTTTGTGCTCTGGCACGCAAGACCAGTTTTGCAGTTCCAAGTGCATGGAAGTATCTTTaGAAACTTAACAGTCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHTLVCALARKTSFAVPSAWKYL*KLNSRF Trigger: GAAACGACTGTTAAGTTTCCAAAGATACTTCCATGC...ACTTGGAACTGCAAAACTGGTCTTGCGTGCCAGAGCACAAACGAGAGTGTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CCA 90 bp | AAAGACATCTGTCAGGATTTAGGTTGGGCAGTTTTGGAAAGAGGAAAAATGTTTTCTTCATCCAGCAGGTaGAGAGGGGCCTGCGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: KDICQDLGWAVLERGKMFSSSSR*RGACGI Trigger: TATACCGCAGGCCCCTCTCCACCTGCTGGATGAAGA...AAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACAGATGTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR TCA 90 bp | AGCAATCCCATAATACTCGTGTATTTTGGCATGGGAATCAGTAGCGTTTGGTATGCATGCAAACACATTTaGCACTCTGTTCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SNPIILVYFGMGISSVWYACKHI*HSVQGS Trigger: AGAGCCCTGAACAGAGTGTCAAATGTGTTTGCATGC...ATACCAAACGCTACTGATTCCCATGCCAAAATACACGAGTATTATGGGATTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR TCA 90 bp | GCCATTGTTTATACAGGTAGCAATCCCATAATACTCGTGTATTTTGGCATGGGATGGGAGTTGAAGAGGTaGCACAACAGAGTTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AIVYTGSNPIILVYFGMGWELKR*HNRVTR Trigger: TCTGGTAACTCTGTTGTGTCACCTCTTCAACTCCCA...TCCCATGCCAAAATACACGAGTATTATGGGATTGCTACCTGTATAAACAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CCA 90 bp | CCAAAGGGACTTTGGTATTGTAGCCATATCAGACAAATGTGTGGCATGGGGGCAAGAAGCCTAGATGCATaGAAGTATCTTTGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: PKGLWYCSHIRQMCGMGARSLDA*KYLWKL Trigger: AAGTTTCCAAAGATACTTCCATGCATCTAGGCTTCT...TGCCCCCATGCCACACATTTGTCTGATATGGCTACAATACCAAAGTCCCTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| 3UTR CAA 72 bp | AGCTTCTCAGCCAGCTTGTTAAAACTGTGTGCAGCATaGCTGTGCTGGAAAGTGATTTACATCTTGCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SFSASLLKLCAA*LCWKVIYILLI Trigger: AATGAGCAAGATGTAAATCACTTTCCAGCACAGCAATGCTGCACACAGTTTTAACAAGCTGGCTGAGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020165.14 ENSMUST00000169016.8 |
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| 3UTR CAA 72 bp | AGAGGTGACACAACAGAGTTACCAGACTGTTCCCATTaGTCAAGCGATCAAACAAGAAAATGTCAAAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGDTTELPDCSH*SSDQTRKCQSP Trigger: GGGACTTTGACATTTTCTTGTTTGATCGCTTGACAAATGGGAACAGTCTGGTAACTCTGTTGTGTCACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| CDS-3UTR CCA 90 bp | AAAACTAACAGTATTCTGTTCACAGTGCCATTGTTTATACAGGTAGCAATCCCATTGATCAAAAATGGCTaGTTGACCCCTGGGTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KTNSILFTVPLFIQVAIPLIKNG*LTPGWS Trigger: GGACCACCCAGGGGTCAACCAGCCATTTTTGATCAA...TGGGATTGCTACCTGTATAAACAATGGCACTGTGAACAGAATACTGTTAGTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| 3UTR CAA 72 bp | AGCAGGAATCTTTCTGCTGTATTCTCATGTGAGGCCTaGCTTAAGTTCAGAGCTTCAGAATACCATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRNLSAVFSCEA*LKFRASEYHSN Trigger: ATTGCTATGGTATTCTGAAGCTCTGAACTTAAGCAAGGCCTCACATGAGAATACAGCAGAAAGATTCCTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR GCA 90 bp | AAAACTAACAGTATTCTGTTCACAGTGCCATTGTTTATACAGGTAGCAATCCCATTTCACTCCACTGCTTaGTCATCTCCCAGATACGAC | + |
|
Preference number: 4 (lower is better) Translates to: KTNSILFTVPLFIQVAIPFHSTA*SSPRYD Trigger: GTCGTATCTGGGAGATGAGCAAGCAGTGGAGTGAAA...TGGGATTGCTACCTGTATAAACAATGGCACTGTGAACAGAATACTGTTAGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CCA 90 bp | CATTGGCAGTTTCCATATAACATTAATTATGCTAGAGCTCACGAAGAAAAGGCTAGGTTGGCAAGATGGTaGTTAGTTTTGATCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HWQFPYNINYARAHEEKARLARW*LVLIKN Trigger: ATTTTTGATCAAAACTAACCACCATCTTGCCAACCT...AGCCTTTTCTTCGTGAGCTCTAGCATAATTAATGTTATATGGAAACTGCCAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS GCA 90 bp | TTTACCATCCTGATCATCTCTGGCAAGTCCCAGGGTAGCGGCCCCTaGTGGCACCCCGGCCTGCTGCTGAGGGAAGAGGGTAGCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: FTILIISGKSQGSGP*WHPGLLLREEGSTA Trigger: AGCTGTGCTACCCTCTTCCCTCAGCAGCAGGCCGGGGTGCCAGCAGGGGCCGCTACCCTGGGACTTGCCAGAGATGATCAGGATGGTAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164195.2 ENSMUST00000169016.8 ENSMUST00000169404.8 |
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| CDS-3UTR CAA 90 bp | CCTTTCTTACTTCCAGGCGTTTCGGTTGGGGCAGCCGCCCCAGAATCAGCTCCATGGAGAGCATGTGCCTaGCTTGTCCAAGGTAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFLLPGVSVGAAAPESAPWRACA*LVQGSL Trigger: AAGACTACCTTGGACAAGCAAGGCACATGCTCTCCA...TGGAGCTGATTCTGGGGCGGCTGCCCCAACCGAAACGCCTGGAAGTAAGAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | GTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGACTTTCCACTGGGCTTTGTaGTGCGCGAGATGGCTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VTVNAKETHTNRPRTKGTFHWAL*CARWLS Trigger: GCTAAGCCATCTCGCGCACAACAAAGCCCAGTGGAA...AGTCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | CAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGATGCCTCTCGGTTTGGTaGCCTGTAGCTCACTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLLSTPKKRTPTVHGPKGCLSVW*PVAHFW Trigger: CCAAAAGTGAGCTACAGGCAACCAAACCGAGAGGCA...TCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| CDS-3UTR CAA 90 bp | CAGTTACTGTCAACGCCAAAGAAACGCACACCAACCGTCCACGGACCAAAGGGAGTCACCATATCGAGCTaGAAATGGTGGATGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLLSTPKKRTPTVHGPKGVTISS*KWWMSP Trigger: TGGGCTCATCCACCATTTCAAGCTCGATATGGTGAC...TCCCTTTGGTCCGTGGACGGTTGGTGTGCGTTTCTTTGGCGTTGACAGTAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | CTTGTGACCTTAGCAGGGAAGCAGAGATGGTCACTAGGGGCAGGCAGTTCAGAACTTTCACTCCACTGCTaGCTCATCTCCCAGATACGA | + |
|
Preference number: 5 (lower is better) Translates to: LVTLAGKQRWSLGAGSSELSLHC*LISQIR Trigger: TCGTATCTGGGAGATGAGCAAGCAGTGGAGTGAAAG...TTCTGAACTGCCTGCCCCTAGTGACCATCTCTGCTTCCCTGCTAAGGTCACAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS TCA 90 bp | TTGGAAGAGGAGGAGGAGACGAGGCAGCTAGCATGCAAACACATTTaGCACTCTGTTCAGGGCTCTCAAACAAGACTTCGCCACACCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEEEEETRQLACKHI*HSVQGSQTRLRHTS Trigger: AGAGGTGTGGCGAAGTCTTGTTTGAGAGCCCTGAACAGAGTGTCAAATGTGTTTGCATGCTAGCTGCCTCGTCTCCTCCTCCTCTTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170265.8 |
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| CDS-3UTR CAA 90 bp | CCAAAGGGACTTTGGTATTGTAGCCATATCAGACAAATGTGTGGCATGGGGGCACCTGTGTCATTTCCTTaGGCAAGTGAGCCAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKGLWYCSHIRQMCGMGAPVSFP*ASEPGA Trigger: GGCTCCTGGCTCACTTGCCAAAGGAAATGACACAGG...TGCCCCCATGCCACACATTTGTCTGATATGGCTACAATACCAAAGTCCCTTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | AGTGGCTTGATCATGGCAGAAATGCCCCCTCTCCCACTACTTAAGATAAAGAGAATCAAAAATGGCTGGTaGACCCCTGGGTGGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: SGLIMAEMPPLPLLKIKRIKNGW*TPGWST Trigger: CGTGGACCACCCAGGGGTCAACCAGCCATTTTTGAT...TCTCTTTATCTTAAGTAGTGGGAGAGGGGGCATTTCTGCCATGATCAAGCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | CCCATTTCGGCAGCTAATGCTGAGGTGACAATGGCTTTTGTACACTTGGATCAACTCTTCCACTGGGCTTaGTTGTGCGCGAGATGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: PISAANAEVTMAFVHLDQLFHWA*LCARWL Trigger: AAGCCATCTCGCGCACAACAAAGCCCAGTGGAAGAG...TTGATCCAAGTGTACAAAAGCCATTGTCACCTCAGCATTAGCTGCCGAAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | CCCAGATACGACAAGGATTGCAAATGTCAGCACACTTCAAGGCGATCTGAAGCAAGAATGCCTCTCGGTTaGGTTGCCTGTAGCTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PRYDKDCKCQHTSRRSEARMPLG*VACSSL Trigger: AAGTGAGCTACAGGCAACCAAACCGAGAGGCATTCT...TGCTTCAGATCGCCTTGAAGTGTGCTGACATTTGCAATCCTTGTCGTATCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| CDS-3UTR CAA 90 bp | GTTGAAGAGGTGACACAACAGAGTTACCAGACTGTTCCCATTTGTCAAGCGATCGCCTGTAGCTCACTTTaGGACTTCCAAACCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VEEVTQQSYQTVPICQAIACSSL*DFQTSF Trigger: AAAGCTGGTTTGGAAGTCCAAAAGTGAGCTACAGGC...GATCGCTTGACAAATGGGAACAGTCTGGTAACTCTGTTGTGTCACCTCTTCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169016.8 |
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| CDS-3UTR CAA 90 bp | AAAACTAACAGTATTCTGTTCACAGTGCCATTGTTTATACAGGTAGCAATCCCATCCCACGTTCCAACTTaGGAGAGCATGTGCCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KTNSILFTVPLFIQVAIPSHVPT*ESMCLA Trigger: AGCAAGGCACATGCTCTCCAAAGTTGGAACGTGGGA...TGGGATTGCTACCTGTATAAACAATGGCACTGTGAACAGAATACTGTTAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | AAAGACATCTGTCAGGATTTAGGTTGGGCAGTTTTGGAAAGAGGAAAAATGTTTGAGCATGTGCCTTGCTaGTCCAAGGTAGTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KDICQDLGWAVLERGKMFEHVPC*SKVVFI Trigger: GATGAAGACTACCTTGGACAAGCAAGGCACATGCTC...AAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACAGATGTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | AGCAATCCCATAATACTCGTGTATTTTGGCATGGGAATCAGTAGCGTTTGGTATCAGATACGACAAGGATaGCAAATGTCAGCACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SNPIILVYFGMGISSVWYQIRQG*QMSAHF Trigger: GAAGTGTGCTGACATTTGCAATCCTTGTCGTATCTG...ATACCAAACGCTACTGATTCCCATGCCAAAATACACGAGTATTATGGGATTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | AAAGACATCTGTCAGGATTTAGGTTGGGCAGTTTTGGAAAGAGGAAAAATGTTTAGCATGCAAACACATTaGACACTCTGTTCAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KDICQDLGWAVLERGKMFSMQTH*TLCSGL Trigger: GAGCCCTGAACAGAGTGTCAAATGTGTTTGCATGCT...AAACATTTTTCCTCTTTCCAAAACTGCCCAACCTAAATCCTGACAGATGTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | AAAACTAACAGTATTCTGTTCACAGTGCCATTGTTTATACAGGTAGCAATCCCACTGTTCAAGGTCACCTaGTCTGTAGAATTCCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KTNSILFTVPLFIQVAIPLFKVT*SVEFLT Trigger: TGTGAGGAATTCTACAGACAAGGTGACCTTGAACAG...TGGGATTGCTACCTGTATAAACAATGGCACTGTGAACAGAATACTGTTAGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS-3UTR CAA 90 bp | AAAACTAACAGTATTCTGTTCACAGTGCCATTGTTTATACAGGTAGCAATCCCAAGATGGTGGTTAGTTTaGATCAAAAATGGCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KTNSILFTVPLFIQVAIPRWWLV*IKNGWL Trigger: CAACCAGCCATTTTTGATCAAAACTAACCACCATCT...TGGGATTGCTACCTGTATAAACAATGGCACTGTGAACAGAATACTGTTAGTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS TCA 90 bp | GATTTCAACTCACCAATTTGTATGCTAGGGATTGAATCTTTCTGTTaGTTACAAAGAGGACTGATTTCCAGTTCAAACTTCTGTTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: DFNSPICMLGIESFC*LQRGLISSSNFCSR Trigger: CCTTGAACAGAAGTTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGATTCAATCCCTAGCATACAAATTGGTGAGTTGAAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164195.2 |
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| CDS GCA 72 bp | AAGAGGGTAGCACAGCTTCTGGGGCCGTCCACCTCCTaGCTAGTTCTGCAGAGTGGAAGTACCGCTCTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: KRVAQLLGPSTS*LVLQSGSTALA Trigger: TGCTAGAGCGGTACTTCCACTCTGCAGAACTAGGCAGGAGGTGGACGGCCCCAGAAGCTGTGCTACCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164195.2 ENSMUST00000169016.8 ENSMUST00000169404.8 |
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| CDS CAA 72 bp | TCTGACCCCTTAGTCGTACATCTCCTTGGCCGGCCATaGGAAGAGGAGGAGGAGACGAGGCAGCTAGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: SDPLVVHLLGRP*EEEEETRQLAC Trigger: GCATGCTAGCTGCCTCGTCTCCTCCTCCTCTTCCAATGGCCGGCCAAGGAGATGTACGACTAAGGGGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170265.8 |
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| CDS CAA 90 bp | GAACCCCCGTCTGACCCCTTAGTCGTACATCTCCTTGGCCGGCCATaGGAAGAGGAGGAGGAGACGAGGCAGCTAGCATGCAAACACATT | + |
|
Preference number: 6 (lower is better) Translates to: EPPSDPLVVHLLGRP*EEEEETRQLACKHI Trigger: AATGTGTTTGCATGCTAGCTGCCTCGTCTCCTCCTCCTCTTCCAATGGCCGGCCAAGGAGATGTACGACTAAGGGGTCAGACGGGGGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170265.8 |
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| CDS TCA 72 bp | GCTCACTTTTGGACTTCCAAACCAGCTTTACCATCCTaGTCATCTCTGGCAAGTCCCAGGGTAGCGGCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AHFWTSKPALPS*SSLASPRVAAP Trigger: AGGGGCCGCTACCCTGGGACTTGCCAGAGATGATCAGGATGGTAAAGCTGGTTTGGAAGTCCAAAAGTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164195.2 ENSMUST00000169016.8 ENSMUST00000169404.8 |
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| CDS CAA 90 bp | ATTGGAAGAGGAGGAGGAGACGAGGCAGCTAGCATGCAAACACATTaGACACTCTGTTCAGGGCTCTCAAACAAGACTTCGCCACACCTC | + |
|
Preference number: 6 (lower is better) Translates to: IGRGGGDEAASMQTH*TLCSGLSNKTSPHL Trigger: GAGGTGTGGCGAAGTCTTGTTTGAGAGCCCTGAACAGAGTGTCAAATGTGTTTGCATGCTAGCTGCCTCGTCTCCTCCTCCTCTTCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170265.8 |
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| CDS TCA 72 bp | GAGGAGGAGACGAGGCAGCTAGCATGCAAACACATTTaGCACTCTGTTCAGGGCTCTCAAACAAGACTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: EEETRQLACKHI*HSVQGSQTRLR Trigger: GCGAAGTCTTGTTTGAGAGCCCTGAACAGAGTGTCAAATGTGTTTGCATGCTAGCTGCCTCGTCTCCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170265.8 |
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| CDS CAA 90 bp | TCATTTTCCAGAATGCCTCTCGGTTTGGTTGCCTGTAGCTCACTTTaGGACTTCCAAACCAGCTTTACCATCCTGATCATCTCTGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFSRMPLGLVACSSL*DFQTSFTILIISGK Trigger: CTTGCCAGAGATGATCAGGATGGTAAAGCTGGTTTGGAAGTCCAAAAGTGAGCTACAGGCAACCAAACCGAGAGGCATTCTGGAAAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164195.2 ENSMUST00000169016.8 ENSMUST00000169404.8 |
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| CDS CCA 72 bp | GGGAAGCATCTTCATTTTCCAGAATGCCTCTCGGTTTaGTTGCCTGTAGCTCACTTTTGGACTTCCAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: GKHLHFPECLSV*LPVAHFWTSKP Trigger: TGGTTTGGAAGTCCAAAAGTGAGCTACAGGCAACCAAACCGAGAGGCATTCTGGAAAATGAAGATGCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164195.2 ENSMUST00000169016.8 ENSMUST00000169404.8 |
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| CDS CAA 72 bp | CCCCTTAGTCGTACATCTCCTAGCATGCAAACACATTaGACACTCTGTTCAGGGCTCTCAAACAAGACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PLSRTSPSMQTH*TLCSGLSNKTS Trigger: CGAAGTCTTGTTTGAGAGCCCTGAACAGAGTGTCAAATGTGTTTGCATGCTAGGAGATGTACGACTAAGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020165.14 |
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| CDS CAA 72 bp | AAGCATCTTCATTTTCCAGAATGCCTCTCGGTTTGGTaGCCTGTAGCTCACTTTTGGACTTCCAAACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KHLHFPECLSVW*PVAHFWTSKPA Trigger: AGCTGGTTTGGAAGTCCAAAAGTGAGCTACAGGCAACCAAACCGAGAGGCATTCTGGAAAATGAAGATGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000164195.2 ENSMUST00000169016.8 ENSMUST00000169404.8 |
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| CDS TCA 72 bp | TCACCAATTTGTATGCTAGGGATTGAATCTTTCTGTTaGTTACAAAGAGGACTGATTTCCAGTTCAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPICMLGIESFC*LQRGLISSSNF Trigger: GAAGTTTGAACTGGAAATCAGTCCTCTTTGTAATCAACAGAAAGATTCAATCCCTAGCATACAAATTGGTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164195.2 |
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