Pregenerated sensors for PDE7A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069094Ensembl transcript IDs: ENSMUST00000091314.11, ENSMUST00000099195.10, ENSMUST00000149081.8, ENSMUST00000156652.8
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACGCTGGAGTGAAAAGCTTCGTGTGGCGTCTGTGGTAAATAAATaGTCAGTCTCCAGGCACAGAGCAGAGCAGCAGGTGGGAGGCGAT | + |
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Preference number: 1 (lower is better) Translates to: PRWSEKLRVASVVNK*SVSRHRAEQQVGGD Trigger: ATCGCCTCCCACCTGCTGCTCTGCTCTGTGCCTGGAGACTGAGCATTTATTTACCACAGACGCCACACGAAGCTTTTCACTCCAGCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR CCA 90 bp | AGGCCTGGGAGGGCAGTAAGGCCACTCTATTGGCACTGTGGATGGTaGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCT | + |
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Preference number: 1 (lower is better) Translates to: RPGRAVRPLYWHCGW*HTPLIVGPRSREVS Trigger: AGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCACCATCCACAGTGCCAATAGAGTGGCCTTACTGCCCTCCCAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR CCA 90 bp | GTTAGGCCTGGGAGGGCAGTAAGGCCACTCTATTGGCACTGTGGATaGTGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: VRPGRAVRPLYWHCG*WHTPLIVGPRSREV Trigger: TACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCACCATCCACAGTGCCAATAGAGTGGCCTTACTGCCCTCCCAGGCCTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR TCA 90 bp | GAAGAAAAGGCAAATGCTGCGAAGAGCTGCAGTCTCCAGCTCAGCTaGGAACGGTCAGTGGTTCCTTCACAACGATGCTCCGAGGCAATT | + |
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Preference number: 1 (lower is better) Translates to: EEKANAAKSCSLQLS*ERSVVPSQRCSEAI Trigger: AATTGCCTCGGAGCATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTCTTCGCAGCATTTGCCTTTTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR GCA 90 bp | GGAGGCGATGATGACATTGACATCCGAAGAAGAAAAGGCAAATGCTaGGAAGAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: GGDDDIDIRRRKGKC*EELQSPAQLRTVSG Trigger: ACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTCTTCGCAGCATTTGCCTTTTCTTCTTCGGATGTCAATGTCATCATCGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR GCA 90 bp | GAGAATGTAGTGGAAGGGACGGATGCGCTGTTGGACTGGACTGGTTaGATCAAGATTGCTGCTGAGGTTGAGTTCAAGTTTCAGGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: ENVVEGTDALLDWTG*IKIAAEVEFKFQGL Trigger: CAAGCCCTGAAACTTGAACTCAACCTCAGCAGCAATCTTGATGCAACCAGTCCAGTCCAACAGCGCATCCGTCCCTTCCACTACATTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR CCA 90 bp | ATGCTGCGAAGAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTaGTTCCTTCACAACGATGCTCCGAGGCAATTTAGAACCAATAGT | + |
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Preference number: 1 (lower is better) Translates to: MLRRAAVSSSAENGQ*FLHNDAPRQFRTNS Trigger: ACTATTGGTTCTAAATTGCCTCGGAGCATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTCTTCGCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR GCA 90 bp | GTAGGTCAAGTGTACAGTAGTGAAAACAACATGCAGTGTCTTCACTaGAGAGTCAGAACACAGCTAGGACAGTGGTGTTCCTTCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: VGQVYSSENNMQCLH*RVRTQLGQWCSFPP Trigger: GGGAGGGAAGGAACACCACTGTCCTAGCTGTGTTCTGACTCTGCAGTGAAGACACTGCATGTTGTTTTCACTACTGTACACTTGACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR CCA 90 bp | AGCAACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATaGCTTTACACTCAAGTTCTCTCCCAAGATGGCTGTTGCAACAAA | + |
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Preference number: 1 (lower is better) Translates to: SNRHVFKRVCPSLHT*LYTQVLSQDGCCNK Trigger: TTTGTTGCAACAGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR TCA 90 bp | GTTGCATCAAGATTGCTGCTGAGGTTGAGTTCAAGTTTCAGGGCTTaGAGGACACACACTCTGAAAGCACATGGCACACCTAAAACATCA | + |
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Preference number: 1 (lower is better) Translates to: VASRLLLRLSSSFRA*RTHTLKAHGTPKTS Trigger: TGATGTTTTAGGTGTGCCATGTGCTTTCAGAGTGTGTGTCCTTCAAGCCCTGAAACTTGAACTCAACCTCAGCAGCAATCTTGATGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR TCA 90 bp | TGCCTATGTCTGCCATCGTCAAGGTGTAAGTCACCTTTATCCAAGTaGGATCTAAACAATGACAGGTACTCGTTCTGGCGACTGATATCC | + |
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Preference number: 1 (lower is better) Translates to: CLCLPSSRCKSPLSK*DLNNDRYSFWRLIS Trigger: GGATATCAGTCGCCAGAACGAGTACCTGTCATTGTTTAGATCTCACTTGGATAAAGGTGACTTACACCTTGACGATGGCAGACATAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149081.8 |
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| 3UTR GCA 90 bp | CTATCTCCACAGGGAGATGGATGCTTTAGGAAACTTTGTGTCCCTTaGTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LSPQGDGCFRKLCVP*SEFLLRKPADPNLA Trigger: AGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTTCCTAAAGCATCCATCTCCCTGTGGAGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR TCA 90 bp | TACCTCTCACACACTGCAGCGAAAGGGACTTTAGTACCCTTGATTTaGAGGACACACTTCCCTAGCCCACTTTATTTCAGATTGGCAAAT | + |
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Preference number: 1 (lower is better) Translates to: YLSHTAAKGTLVPLI*RTHFPSPLYFRLAN Trigger: ATTTGCCAATCTGAAATAAAGTGGGCTAGGGAAGTGTGTCCTTCAAATCAAGGGTACTAAAGTCCCTTTCGCTGCAGTGTGTGAGAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR TCA 90 bp | GGACACACTTCCCTAGCCCACTTTATTTCAGATTGGCAAATCCCCTaGGCTGATTATGGTATGTTAAACATTCCACCTTTTGCTTGCATG | + |
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Preference number: 1 (lower is better) Translates to: GHTSLAHFISDWQIP*ADYGMLNIPPFACM Trigger: CATGCAAGCAAAAGGTGGAATGTTTAACATACCATAATCAGCTCAGGGGATTTGCCAATCTGAAATAAAGTGGGCTAGGGAAGTGTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR GCA 90 bp | GGGTTACAAATATCAGCACATTTCAAGGCCATCTGTAGAACCAAATaGCTATGTCTGCCATCGTCAAGGTGTAAGTCACCTTTATCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GLQISAHFKAICRTK*LCLPSSRCKSPLSK Trigger: CTTGGATAAAGGTGACTTACACCTTGACGATGGCAGACATAGGCATTTGGTTCTACAGATGGCCTTGAAATGTGCTGATATTTGTAACCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149081.8 |
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| 3UTR GCA 90 bp | AGTAACTTGTTTACTGATAGCCCAATTTACATCTGCCCACTACCCTaGACACTGAAGAATGTGAGAGACCTTTTATGTTCCTGTCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: SNLFTDSPIYICPLP*TLKNVRDLLCSCQF Trigger: GAACTGACAGGAACATAAAAGGTCTCTCACATTCTTCAGTGTGCAGGGTAGTGGGCAGATGTAAATTGGGCTATCAGTAAACAAGTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
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| 3UTR TCA 90 bp | ATGGATGCTTTAGGAAACTTTGTGTCCCTTGCTCAGAATTCTTGCTaGGGAAACCAGCTGATCCTAATTTGGCTTCTGAAGATTTACCTA | + |
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Preference number: 1 (lower is better) Translates to: MDALGNFVSLAQNSC*GNQLILIWLLKIYL Trigger: TAGGTAAATCTTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTTCCTAAAGCATCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR GCA 90 bp | ATAGAACTCCACAGTAACTTGTTTACTGATAGCCCAATTTACATCTaGCCACTACCCTGCACACTGAAGAATGTGAGAGACCTTTTATGT | + |
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Preference number: 1 (lower is better) Translates to: IELHSNLFTDSPIYI*PLPCTLKNVRDLLC Trigger: ACATAAAAGGTCTCTCACATTCTTCAGTGTGCAGGGTAGTGGGCAGATGTAAATTGGGCTATCAGTAAACAAGTTACTGTGGAGTTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
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| 3UTR GCA 90 bp | CTCCTGCTGAGCTTTACAGACTTAAGGTTTCATACAAAAGCAAGATaGATATTGCTGTATATTCATGTCTTACCATTAAAACGTGCGCTC | + |
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Preference number: 1 (lower is better) Translates to: LLLSFTDLRFHTKAR*ILLYIHVLPLKRAL Trigger: GAGCGCACGTTTTAATGGTAAGACATGAATATACAGCAATATGCATCTTGCTTTTGTATGAAACCTTAAGTCTGTAAAGCTCAGCAGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR TCA 90 bp | GTGGGCCCAGATTCCCAAATGGCTGCTACATACTCAAAAATTCTTTaGAGTGTCCAATATATCATGAAATACCATGAATTTTGTGCTACT | + |
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Preference number: 1 (lower is better) Translates to: VGPDSQMAATYSKIL*SVQYIMKYHEFCAT Trigger: AGTAGCACAAAATTCATGGTATTTCATGATATATTGGACACTTCAAAGAATTTTTGAGTATGTAGCAGCCATTTGGGAATCTGGGCCCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
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| 3UTR-3UTR CCA 90 bp | GAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTGGTTCCTTCACAACGATGCTGGCATCATCCCCTTaGAAACCTCAGCAGTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: ELQSPAQLRTVSGSFTTMLASSP*KPQQSE Trigger: TTCTGACTGCTGAGGTTTCCAAGGGGATGATGCCAG...CATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTGGTTCCTTCACAACGATGCATTTGATTGATTCTTaGCAGAGGCAGCAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: ELQSPAQLRTVSGSFTTMHLIDS*QRQQRL Trigger: CAGCCTCTGCTGCCTCTGGCAAGAATCAATCAAATG...CATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR CAA 90 bp | TCCAACTTTTTCCAGCATACACTTCGTTCACGTTCTGTTCTAGGTTaGTGGGCAGGGTTGCACTGTACAGCCCTGTCTACAGCTCACGGC | + |
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Preference number: 2 (lower is better) Translates to: SNFFQHTLRSRSVLG*WAGLHCTALSTAHG Trigger: GCCGTGAGCTGTAGACAGGGCTGTACAGTGCAACCCTGCCCACAAACCTAGAACAGAACGTGAACGAAGTGTATGCTGGAAAAAGTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTGAGCAGAGCAGCAGGTaGGAGGCGATGATGACATTG | + |
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Preference number: 2 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTEQSSR*EAMMTL Trigger: CAATGTCATCATCGCCTCCCACCTGCTGCTCTGCTC...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTGAGTTGAGGGAGCAGAGCAGCAGGTaGGAGGCGATGATGACATTG | + |
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Preference number: 2 (lower is better) Translates to: WHTPLIVGPRSREVSELREQSSR*EAMMTL Trigger: CAATGTCATCATCGCCTCCCACCTGCTGCTCTGCTC...CCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTGAGTTGAGGACACAGCTAGGACAGTaGTGTTCCTTCCCTCCCACC | + |
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Preference number: 2 (lower is better) Translates to: WHTPLIVGPRSREVSELRTQLGQ*CSFPPT Trigger: GGTGGGAGGGAAGGAACACCACTGTCCTAGCTGTGT...CCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR CCA 90 bp | CACCTATCTGAGCCTCCATCTCTTGCCTGCTTTCCAATGGCAAGTGTGAGAACACGGCTGATTAACACCTaGGTGATCCAGATCGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: HLSEPPSLACFPMASVRTRLINT*VIQIVS Trigger: ACTCACGATCTGGATCACCCAGGTGTTAATCAGCCG...TGTTCTCACACTTGCCATTGGAAAGCAGGCAAGAGATGGAGGCTCAGATAGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149081.8 |
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| 3UTR CAA 90 bp | TTCTGTTTTCTCAGAGAGAATGTAGTGGAAGGGACGGATGCGCTGTaGGACTGGACTGGTTGCATCAAGATTGCTGCTGAGGTTGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: FCFLRENVVEGTDAL*DWTGCIKIAAEVEF Trigger: GAACTCAACCTCAGCAGCAATCTTGATGCAACCAGTCCAGTCCAACAGCGCATCCGTCCCTTCCACTACATTCTCTCTGAGAAAACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR GCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATCATTTGATTGATTCTTaGCAGAGGCAGCAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDHLIDS*QRQQRL Trigger: CAGCCTCTGCTGCCTCTGGCAAGAATCAATCAAATG...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR CCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGATGCGCTGTTGGACTaGACTGGTTGCATCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDDALLD*TGCIKI Trigger: AATCTTGATGCAACCAGTCCAGTCCAACAGCGCATC...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTGAGTTGAGGCCTTTCCCACATGGATaGACAGAACATGCACAGCCA | + |
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Preference number: 2 (lower is better) Translates to: WHTPLIVGPRSREVSELRPFPHG*TEHAQP Trigger: TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGG...CCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR GCA 90 bp | ACTTTAGGAGGGGCCAGTGGCTGTCTTTGGGTAATGACTATTATCCTGTACCCAAGAAAAGGCAAATGCTaGGAAGAGCTGCAGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: TLGGASGCLWVMTIILYPRKGKC*EELQSP Trigger: TGGAGACTGCAGCTCTTCGCAGCATTTGCCTTTTCT...TGGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGGCTAAAAGGAATCTGCATTaGCAACCACGCTGGAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: CAQAFTHGFTLKFSPKMAKRNLH*QPRWSE Trigger: TTCACTCCAGCGTGGTTGGCAATGCAGATTCCTTTT...AGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR CCA 90 bp | TGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTGAGTTGAGGGATGCGCTGTTGGACTaGACTGGTTGCATCAAGATT | + |
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Preference number: 2 (lower is better) Translates to: WHTPLIVGPRSREVSELRDALLD*TGCIKI Trigger: AATCTTGATGCAACCAGTCCAGTCCAACAGCGCATC...CCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR CCA 90 bp | AAACTTTGTGTCCCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATACACAGCTAGGACAGTaGTGTTCCTTCCCTCCCACC | + |
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Preference number: 2 (lower is better) Translates to: KLCVPCSEFLLRKPADPNTQLGQ*CSFPPT Trigger: GGTGGGAGGGAAGGAACACCACTGTCCTAGCTGTGT...ATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR TCA 90 bp | TGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTGAGTTGAGGTCAAGTTTCAGGGCTTaGAGGACACACACTCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: WHTPLIVGPRSREVSELRSSFRA*RTHTLK Trigger: TTTCAGAGTGTGTGTCCTTCAAGCCCTGAAACTTGA...CCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR TCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGATTGGCAAATCCCCTaGGCTGATTATGGTATGTTA | + |
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Preference number: 2 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDDWQIP*ADYGML Trigger: TAACATACCATAATCAGCTCAGGGGATTTGCCAATC...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR GCA 90 bp | AAACTTTGTGTCCCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATCCGGACGGTCAAATATaGTGTCACTTTAGGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: KLCVPCSEFLLRKPADPNPDGQI*CHFRRG Trigger: GCCCCTCCTAAAGTGACAGCATATTTGACCGTCCGG...ATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR CCA 90 bp | CCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTTGGCTTCTGAATTTAGGAGGGGCCAGTaGCTGTCTTTGGGTAATGAC | + |
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Preference number: 2 (lower is better) Translates to: PCSEFLLRKPADPNLASEFRRGQ*LSLGND Trigger: GTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAA...TTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTAGGACACAATGGCTGCAGTTTCAAAGTTATGCTTCAAAAACATGGCAACAAAATACCCAGGACTaGACGGGAGAGGCAGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: VLRTQWLQFQSYASKTWQQNTQD*TGEAAA Trigger: AGCTGCTGCCTCTCCCGTTCAGTCCTGGGTATTTTG...TTGCCATGTTTTTGAAGCATAACTTTGAAACTGCAGCCATTGTGTCCTAAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
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| 3UTR-3UTR TCA 90 bp | TGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTGAGTTGAGGTCCCTTTCAAGGGTGTaGTTTCTTAGGCAATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: WHTPLIVGPRSREVSELRSLSRV*FLRQFP Trigger: TGGAAATTGCCTAAGAAATCACACCCTTGAAAGGGA...CCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR GCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTTCTGTGGTAAATAAATaGTCAGTCTCCAGGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTSVVNK*SVSRHR Trigger: TCTGTGCCTGGAGACTGAGCATTTATTTACCACAGA...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR GCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATATTCCACCTTTTGCTTaGATGTGTAGGTCAAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDIPPFA*MCRSSV Trigger: TACACTTGACCTACACATGCAAGCAAAAGGTGGAAT...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGGCTATTCCACCTTTTGCTTaGATGTGTAGGTCAAGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CAQAFTHGFTLKFSPKMAIPPFA*MCRSSV Trigger: TACACTTGACCTACACATGCAAGCAAAAGGTGGAAT...AGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTTGGCTTCTGAATCCCCCAAGTGTGGCTaGTCACTATGTCACATTCTA | + |
|
Preference number: 2 (lower is better) Translates to: PCSEFLLRKPADPNLASESPKCG*SLCHIL Trigger: TAGAATGTGACATAGTGAGCAGCCACACTTGGGGGA...TTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CCA 90 bp | ACTTTAGGAGGGGCCAGTGGCTGTCTTTGGGTAATGACTATTATCCTGTACCCAAGTTCTCTCCCAAGATaGCTGTTGCAACAAACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: TLGGASGCLWVMTIILYPSSLPR*LLQQTV Trigger: TACAGTTTGTTGCAACAGCCATCTTGGGAGAGAACT...TGGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGTAATGACTATTATCCTGTACCCATGCTAATAGGAGAGCCGAATGTGGGCCCAAGCCTTCACACATaGCTTTACACTCAAGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LGNDYYPVPMLIGEPNVGPSLHT*LYTQVL Trigger: GAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGG...GCCCACATTCGGCTCTCCTATTAGCATGGGTACAGGATAATAGTCATTACCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CAA 90 bp | GATCTAACAGAAGACATCTTGATAGATAATGCTGGCATCATCCCCTaGGAAACCTCAGCAGTCAGAACCAGTTCTTCCACTCAAGACCAT | + |
|
Preference number: 2 (lower is better) Translates to: DLTEDILIDNAGIIP*ETSAVRTSSSTQDH Trigger: ATGGTCTTGAGTGGAAGAACTGGTTCTGACTGCTGAGGTTTCCAAGGGGATGATGCCAGCATTATCTATCAAGATGTCTTCTGTTAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR TCA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCATCAAGTTTCAGGGCTTaGAGGACACACACTCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPSSFRA*RTHTLK Trigger: TTTCAGAGTGTGTGTCCTTCAAGCCCTGAAACTTGA...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR TCA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCATTAGTACCCTTGATTTaGAGGACACACTTCCCTAGC | + |
|
Preference number: 2 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPLVPLI*RTHFPS Trigger: GCTAGGGAAGTGTGTCCTTCAAATCAAGGGTACTAA...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR GCA 90 bp | AGAACAAACCAGATTCTCTTAACAAGCCCACTGCAGATCTCCAGTGGTGATTCTGTCTGCAGCATGGACTaGATTGTGGTAAGGATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: RTNQILLTSPLQISSGDSVCSMD*IVVRIL Trigger: CAAAATCCTTACCACAATGCAGTCCATGCTGCAGAC...AGAATCACCACTGGAGATCTGCAGTGGGCTTGTTAAGAGAATCTGGTTTGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149081.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTCCCAGTTCCGACATGGGTTACAAATATCAGCACATTTCAAGGCCATCTGTGATCCAGATCGTGAGTaGCGGCTGCAATTAAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: NSQFRHGLQISAHFKAICDPDRE*RLQLNS Trigger: TGAGTTTAATTGCAGCCGCCACTCACGATCTGGATC...ACAGATGGCCTTGAAATGTGCTGATATTTGTAACCCATGTCGGAACTGGGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149081.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGTAATGACTATTATCCTGTACCCATGCTAATAGGAGAGCCGAATGTGGGCTATTGGCACTGTGGATaGTGGCATACACCTTTAATA | + |
|
Preference number: 2 (lower is better) Translates to: LGNDYYPVPMLIGEPNVGYWHCG*WHTPLI Trigger: TATTAAAGGTGTATGCCACCATCCACAGTGCCAATA...GCCCACATTCGGCTCTCCTATTAGCATGGGTACAGGATAATAGTCATTACCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CAA 90 bp | GGAGATGGATGCTTTAGGAAACTTTGTGTCCCTTGCTCAGAATTCTaGCTGAGGAAACCAGCTGATCCTAATTTGGCTTCTGAAGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: GDGCFRKLCVPCSEF*LRKPADPNLASEDL Trigger: TAAATCTTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTTCCTAAAGCATCCATCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR TCA 90 bp | TTGGGTAATGACTATTATCCTGTACCCATGCTAATAGGAGAGCCGAATGTGGGCTGTTACCAGGCTATCTaGAAGAAAGAATTAAGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LGNDYYPVPMLIGEPNVGCYQAI*KKELSG Trigger: ACCACTTAATTCTTTCTTTCAGATAGCCTGGTAACA...GCCCACATTCGGCTCTCCTATTAGCATGGGTACAGGATAATAGTCATTACCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR GCA 90 bp | AAACTTTGTGTCCCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTCTGTGGTAAATAAATaGTCAGTCTCCAGGCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: KLCVPCSEFLLRKPADPNSVVNK*SVSRHR Trigger: TCTGTGCCTGGAGACTGAGCATTTATTTACCACAGA...ATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTTGGCTTCTGAAACTAGGTTACAGTTGTaGTTGCTCTACATAAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: PCSEFLLRKPADPNLASETRLQL*LLYIRP Trigger: TGGTCTTATGTAGAGCAAGCACAACTGTAACCTAGT...TTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTTAGGACACAATGGCTGCAGTTTCAAAGTTATGCTTCAAAAACATGGCAAGTGTTTAAACGAGTGTaGCCAAGCCTTCACACATGG | + |
|
Preference number: 2 (lower is better) Translates to: VLRTQWLQFQSYASKTWQVFKRV*PSLHTW Trigger: CCATGTGTGAAGGCTTGGGCACACTCGTTTAAACAC...TTGCCATGTTTTTGAAGCATAACTTTGAAACTGCAGCCATTGTGTCCTAAGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTTAGGACACAATGGCTGCAGTTTCAAAGTTATGCTTCAAAAACATGGCAAAGATTCCCAAATGGCTaGTACATACTCAAAAATTCT | + |
|
Preference number: 2 (lower is better) Translates to: VLRTQWLQFQSYASKTWQRFPNG*YILKNS Trigger: AGAATTTTTGAGTATGTAGCAGCCATTTGGGAATCT...TTGCCATGTTTTTGAAGCATAACTTTGAAACTGCAGCCATTGTGTCCTAAGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | ACCCCCATGCTGCTCCTCAGTGGTGGCTCTCTCTCCTaGAGACCCTTGGGGGTCCTCTCGATGCTACGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TPMLLLSGGSLS*RPLGVLSMLRR Trigger: CCTGCGTAGCATCGAGAGGACCCCCAAGGGTCTTCAGGAGAGAGAGCCACCACTGAGGAGCAGCATGGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | ATCCCAGCACTTGGGAGGCAGAGGCAGGTGTATTTCTaGGTTCGAGGCCAGCCTGGTCTACAGAGTTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: IPALGRQRQVYF*VRGQPGLQSSR Trigger: CCTGGAACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAATACACCTGCCTCTGCCTCCCAAGTGCTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | GCAAATGCTGCGAAGAGCTGCAGTCTCCAGCTCAGCTaGGAACGGTCAGTGGTTCCTTCACAACGATGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: ANAAKSCSLQLS*ERSVVPSQRCS Trigger: GGAGCATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTCTTCGCAGCATTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | GAGACCTTTTATGTTCCTGTCAGTTCACCCCCATGCTaGTCCTCAGTGGTGGCTCTCTCTCCTGAAGACCCT | + |
|
Preference number: 3 (lower is better) Translates to: ETFYVPVSSPPC*SSVVALSPEDP Trigger: AGGGTCTTCAGGAGAGAGAGCCACCACTGAGGAGCAGCATGGGGGTGAACTGACAGGAACATAAAAGGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | CGGAACCAGACCTTGCCACACTTGTACGGTGCAGAGTaGGGCTCATACACTCCAGGAAGACAAAGTCTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: RNQTLPHLYGAE*GSYTPGRQSLH Trigger: ATGCAGACTTTGTCTTCCTGGAGTGTATGAGCCTCACTCTGCACCGTACAAGTGTGGCAAGGTCTGGTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | GAGAATGTAGTGGAAGGGACGGATGCGCTGTTGGACTaGACTGGTTGCATCAAGATTGCTGCTGAGGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: ENVVEGTDALLD*TGCIKIAAEVE Trigger: CTCAACCTCAGCAGCAATCTTGATGCAACCAGTCCAGTCCAACAGCGCATCCGTCCCTTCCACTACATTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | GGGAGGGCAGTAAGGCCACTCTATTGGCACTGTGGATaGTGGCATACACCTTTAATAGTAGGACCCAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: GRAVRPLYWHCG*WHTPLIVGPRS Trigger: GCTTCTGGGTCCTACTATTAAAGGTGTATGCCACCATCCACAGTGCCAATAGAGTGGCCTTACTGCCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | GTGGAAGGGACGGATGCGCTGTTGGACTGGACTGGTTaGATCAAGATTGCTGCTGAGGTTGAGTTCAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VEGTDALLDWTG*IKIAAEVEFKF Trigger: AAACTTGAACTCAACCTCAGCAGCAATCTTGATGCAACCAGTCCAGTCCAACAGCGCATCCGTCCCTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | AGTGAAAAGCTTCGTGTGGCGTCTGTGGTAAATAAATaGTCAGTCTCCAGGCACAGAGCAGAGCAGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SEKLRVASVVNK*SVSRHRAEQQV Trigger: CACCTGCTGCTCTGCTCTGTGCCTGGAGACTGAGCATTTATTTACCACAGACGCCACACGAAGCTTTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | AGGGCAGTAAGGCCACTCTATTGGCACTGTGGATGGTaGCATACACCTTTAATAGTAGGACCCAGAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RAVRPLYWHCGW*HTPLIVGPRSR Trigger: CCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCACCATCCACAGTGCCAATAGAGTGGCCTTACTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | CCAGCGCCCCTTCAGCAGTGGGCCCAGATTCCCAAATaGCTGCTACATACTCAAAAATTCTTTGAAGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PAPLQQWAQIPK*LLHTQKFFEVS Trigger: GGACACTTCAAAGAATTTTTGAGTATGTAGCAGCCATTTGGGAATCTGGGCCCACTGCTGAAGGGGCGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | CAGCATACACTTCGTTCACGTTCTGTTCTAGGTTTGTaGGCAGGGTTGCACTGTACAGCCCTGTCTACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QHTLRSRSVLGL*AGLHCTALSTA Trigger: AGCTGTAGACAGGGCTGTACAGTGCAACCCTGCCCACAAACCTAGAACAGAACGTGAACGAAGTGTATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| 3UTR GCA 72 bp | CTGTTTTCTCAGAGAGAATGTAGTGGAAGGGACGGATaGGCTGTTGGACTGGACTGGTTGCATCAAGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: LFSQRECSGRDG*AVGLDWLHQDC Trigger: GCAATCTTGATGCAACCAGTCCAGTCCAACAGCGCATCCGTCCCTTCCACTACATTCTCTCTGAGAAAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCAGCTGGCATCATCCCCTaGGAAACCTCAGCAGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPAGIIP*ETSAVR Trigger: TCTGACTGCTGAGGTTTCCAAGGGGATGATGCCAGC...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATAGATTGCTGCTGAGGTaGAGTTCAAGTTTCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDRLLLR*SSSFRA Trigger: AGCCCTGAAACTTGAACTCAACCTCAGCAGCAATCT...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATCTGGTTGCATCAAGATaGCTGCTGAGGTTGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDLVASR*LLRLSS Trigger: TGAACTCAACCTCAGCAGCAATCTTGATGCAACCAG...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGGCTCTGGTTGCATCAAGATaGCTGCTGAGGTTGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: CAQAFTHGFTLKFSPKMALVASR*LLRLSS Trigger: TGAACTCAACCTCAGCAGCAATCTTGATGCAACCAG...AGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | AGATTGCTGCTGAGGTTGAGTTCAAGTTTCAGGGCTTaGAGGACACACACTCTGAAAGCACATGGCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: RLLLRLSSSFRA*RTHTLKAHGTP Trigger: AGGTGTGCCATGTGCTTTCAGAGTGTGTGTCCTTCAAGCCCTGAAACTTGAACTCAACCTCAGCAGCAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | ACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTaGGTTGAGGCCAGTCTGTCTACATTGTTACCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: TFNSRTQKQGGI*VEASLSTLLPG Trigger: GCCTGGTAACAATGTAGACAGACTGGCCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | TGTGATGGGTTTGCAAGCACCACTAAGGTGACCCTTTaGGAAGCTGAGTCAGGAAAGCTAAACCTTCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: CDGFASTTKVTL*EAESGKLNLPA Trigger: AGCAGGAAGGTTTAGCTTTCCTGACTCAGCTTCTCAAAGGGTCACCTTAGTGGTGCTTGCAAACCCATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | CACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATaGCTTTACACTCAAGTTCTCTCCCAAGATGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HVFKRVCPSLHT*LYTQVLSQDGC Trigger: ACAGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | GACGGTCAAATATGCTGTCACTTTAGGAGGGGCCAGTaGCTGTCTTTGGGTAATGACTATTATCCTGTACCC | + |
|
Preference number: 3 (lower is better) Translates to: DGQICCHFRRGQ*LSLGNDYYPVP Trigger: GGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGTGACAGCATATTTGACCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | AAACTTTGTGTCCCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATGCTGGCATCATCCCCTaGGAAACCTCAGCAGTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KLCVPCSEFLLRKPADPNAGIIP*ETSAVR Trigger: TCTGACTGCTGAGGTTTCCAAGGGGATGATGCCAGC...ATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGGCTTTCAAGTTTCAGGGCTaGAAGGACACACACTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CAQAFTHGFTLKFSPKMAFKFQG*KDTHSE Trigger: TTCAGAGTGTGTGTCCTTCAAGCCCTGAAACTTGAA...AGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGTAATGACTATTATCCTGTACCCATGCTAATAGGAGAGCCGAATGTGGGCAGGGAGGTATCTGAGTaGAGGCCAGTCTGTCTACAT | + |
|
Preference number: 3 (lower is better) Translates to: LGNDYYPVPMLIGEPNVGREVSE*RPVCLH Trigger: ATGTAGACAGACTGGCCTCAACTCAGATACCTCCCT...GCCCACATTCGGCTCTCCTATTAGCATGGGTACAGGATAATAGTCATTACCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | CAGGGAGATGGATGCTTTAGGAAACTTTGTGTCCCTTaGTCAGAATTCTTGCTGAGGAAACCAGCTGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: QGDGCFRKLCVP*SEFLLRKPADP Trigger: AGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTTCCTAAAGCATCCATCTCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | CCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTTGGCTTCTGAAAGATTGCTGCTGAGGTaGAGTTCAAGTTTCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PCSEFLLRKPADPNLASERLLLR*SSSFRA Trigger: AGCCCTGAAACTTGAACTCAACCTCAGCAGCAATCT...TTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | TTGGGTAATGACTATTATCCTGTACCCATGCTAATAGGAGAGCCGAATGTGGGCGAGGCGATGATGACATaGACATCCGAAGAAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGNDYYPVPMLIGEPNVGEAMMT*TSEEEK Trigger: CTTTTCTTCTTCGGATGTCAATGTCATCATCGCCTC...GCCCACATTCGGCTCTCCTATTAGCATGGGTACAGGATAATAGTCATTACCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | TGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTGAGTTGAGGCTCCCAAGATGGCTGTaGCAACAAACTGTAAACATA | + |
|
Preference number: 3 (lower is better) Translates to: WHTPLIVGPRSREVSELRLPRWL*QQTVNI Trigger: TATGTTTACAGTTTGTTGCAACAGCCATCTTGGGAG...CCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | CACACTGCAGCGAAAGGGACTTTAGTACCCTTGATTTaGAGGACACACTTCCCTAGCCCACTTTATTTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HTAAKGTLVPLI*RTHFPSPLYFR Trigger: TCTGAAATAAAGTGGGCTAGGGAAGTGTGTCCTTCAAATCAAGGGTACTAAAGTCCCTTTCGCTGCAGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | GGTCCTCTCGATGCTACGCAGGTTCTTAGGACACAATaGCTGCAGTTTCAAAGTTATGCTTCAAAAACATGG | + |
|
Preference number: 3 (lower is better) Translates to: GPLDATQVLRTQ*LQFQSYASKTW Trigger: CCATGTTTTTGAAGCATAACTTTGAAACTGCAGCCATTGTGTCCTAAGAACCTGCGTAGCATCGAGAGGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTAGGAGGGGCCAGTGGCTGTCTTTGGGTAATGACTATTATCCTGTACCCACTAACAGAAGACATCTaGATAGATAATGCTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: TLGGASGCLWVMTIILYPLTEDI*IDNAGI Trigger: GATGCCAGCATTATCTATCAAGATGTCTTCTGTTAG...TGGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCAGAGGCGATGATGACATaGACATCCGAAGAAGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPEAMMT*TSEEEK Trigger: CTTTTCTTCTTCGGATGTCAATGTCATCATCGCCTC...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | AGATACTGTGTGAACTTGTTTAAGGTAATGTTAGCTTaGAGGAGACTTCCTCAGACCCCGGACGGTCAAATA | + |
|
Preference number: 3 (lower is better) Translates to: RYCVNLFKVMLA*RRLPQTPDGQI Trigger: TATTTGACCGTCCGGGGTCTGAGGAAGTCTCCTGCAAGCTAACATTACCTTAAACAAGTTCACACAGTATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | CACAGTAACTTGTTTACTGATAGCCCAATTTACATCTaGCCACTACCCTGCACACTGAAGAATGTGAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: HSNLFTDSPIYI*PLPCTLKNVRD Trigger: GTCTCTCACATTCTTCAGTGTGCAGGGTAGTGGGCAGATGTAAATTGGGCTATCAGTAAACAAGTTACTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | ATATCAGCACATTTCAAGGCCATCTGTAGAACCAAATaGCTATGTCTGCCATCGTCAAGGTGTAAGTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: ISAHFKAICRTK*LCLPSSRCKSP Trigger: AGGTGACTTACACCTTGACGATGGCAGACATAGGCATTTGGTTCTACAGATGGCCTTGAAATGTGCTGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149081.8 |
||
| 3UTR TCA 72 bp | TTAGGAAACTTTGTGTCCCTTGCTCAGAATTCTTGCTaGGGAAACCAGCTGATCCTAATTTGGCTTCTGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LGNFVSLAQNSC*GNQLILIWLLK Trigger: CTTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTTCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | CTCTCGATGCTACGCAGGTTCTTAGGACACAATGGCTaGAGTTTCAAAGTTATGCTTCAAAAACATGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSMLRRFLGHNG*SFKVMLQKHGK Trigger: TTTGCCATGTTTTTGAAGCATAACTTTGAAACTGCAGCCATTGTGTCCTAAGAACCTGCGTAGCATCGAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | TTTACTGATAGCCCAATTTACATCTGCCCACTACCCTaGACACTGAAGAATGTGAGAGACCTTTTATGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FTDSPIYICPLP*TLKNVRDLLCS Trigger: GGAACATAAAAGGTCTCTCACATTCTTCAGTGTGCAGGGTAGTGGGCAGATGTAAATTGGGCTATCAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR-3UTR CAA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCACTAACAGAAGACATCTaGATAGATAATGCTGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPLTEDI*IDNAGI Trigger: GATGCCAGCATTATCTATCAAGATGTCTTCTGTTAG...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | AGCCCACTTTATTTCAGATTGGCAAATCCCCTGAGCTaGTTATGGTATGTTAAACATTCCACCTTTTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SPLYFRLANPLS*LWYVKHSTFCL Trigger: CAAGCAAAAGGTGGAATGTTTAACATACCATAATCAGCTCAGGGGATTTGCCAATCTGAAATAAAGTGGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | TCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATaGCTGTTGCAACAAACTGTAAACATAATGAACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SHMALHSSSLPR*LLQQTVNIMNS Trigger: ACTGTTCATTATGTTTACAGTTTGTTGCAACAGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | TTGAGGCCAGTCTGTCTACATTGTTACCAGGCTATCTaGAAGAAAGAATTAAGTGGTTATTACTTACTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRPVCLHCYQAI*KKELSGYYLLL Trigger: CAGCAGTAAGTAATAACCACTTAATTCTTTCTTTCAGATAGCCTGGTAACAATGTAGACAGACTGGCCTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR GCA 72 bp | CTTACTGCTGTAAAAGGCCAGGAATACAAACACAACTaGTATTTTTATCCCTTTCAAGGGTGTGATTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LTAVKGQEYKHN*YFYPFQGCDFL Trigger: TAAGAAATCACACCCTTGAAAGGGATAAAAATAGCAGTTGTGTTTGTATTCCTGGCCTTTTACAGCAGTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CCA 72 bp | ACATTGTTACCAGGCTATCTGAAAGAAAGAATTAAGTaGTTATTACTTACTGCTGTAAAAGGCCAGGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: TLLPGYLKERIK*LLLTAVKGQEY Trigger: GTATTCCTGGCCTTTTACAGCAGTAAGTAATAACCACTTAATTCTTTCTTTCAGATAGCCTGGTAACAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR TCA 72 bp | CAAACACAACTGCTATTTTTATCCCTTTCAAGGGTGTaGTTTCTTAGGCAATTTCCAACAAATGCTATACAA | + |
|
Preference number: 3 (lower is better) Translates to: QTQLLFLSLSRV*FLRQFPTNAIQ Trigger: TTGTATAGCATTTGTTGGAAATTGCCTAAGAAATCACACCCTTGAAAGGGATAAAAATAGCAGTTGTGTTTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | GTGGGCAGGGTTGCACTGTACAGCCCTGTCTACAGCTCACGGCAATTCTCTTGCCGGCGGCTGAGGACGTaGTGGGGGACCGGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGRVALYSPVYSSRQFSCRRLRT*WGTGLS Trigger: GGACAGGCCGGTCCCCCAGCACGTCCTCAGCCGCCG...GCAAGAGAATTGCCGTGAGCTGTAGACAGGGCTGTACAGTGCAACCCTGCCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR GCA 90 bp | GCATACACTTCGTTCACGTTCTGTTCTAGGTTTGTGGGCAGGGTTGCACTGTACGAGAGCTGCCGGGGATaGGGGCAGCCGAAGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: AYTSFTFCSRFVGRVALYESCRG*GQPKSA Trigger: CGCGCTCTTCGGCTGCCCGCATCCCCGGCAGCTCTC...GTACAGTGCAACCCTGCCCACAAACCTAGAACAGAACGTGAACGAAGTGTATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR TCA 90 bp | ACCTCAGCAGTCAGAACCAGTTCTTCCACTCAAGACCATTTCACATTTCCACAATGGCTCCTCGGCGGCTaGGGACGTGCTGGGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: TSAVRTSSSTQDHFTFPQWLLGG*GRAGGP Trigger: CGGTCCCCCAGCACGTCCTCAGCCGCCGAGGAGCCA...TTGTGGAAATGTGAAATGGTCTTGAGTGGAAGAACTGGTTCTGACTGCTGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCACGGCGGCTGAGGACGTaGTGGGGGACCGGCCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPRRLRT*WGTGLS Trigger: GGACAGGCCGGTCCCCCAGCACGTCCTCAGCCGCCG...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | TTGGGTAATGACTATTATCCTGTACCCATGCTAATAGGAGAGCCGAATGTGGGCCGGCTGAGGACGTGCTaGGGGACCGGCCTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGNDYYPVPMLIGEPNVGRLRTC*GTGLSR Trigger: CCTGGACAGGCCGGTCCCCCAGCACGTCCTCAGCCG...GCCCACATTCGGCTCTCCTATTAGCATGGGTACAGGATAATAGTCATTACCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTGGTTCCTTCACAACGATGGCAGATCTCCAGTGGTaGTTCTCCAGGACTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELQSPAQLRTVSGSFTTMADLQW*FSRTEE Trigger: TTCCTCAGTCCTGGAGAATCACCACTGGAGATCTGC...CATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | CCAATTTCCAACTTTTTCCAGCATACACTTCGTTCACGTTCTGTTCTAGGTTTGTGGCTCCTCGGCGGCTaGGGACGTGCTGGGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: PISNFFQHTLRSRSVLGLWLLGG*GRAGGP Trigger: CGGTCCCCCAGCACGTCCTCAGCCGCCGAGGAGCCA...CAAACCTAGAACAGAACGTGAACGAAGTGTATGCTGGAAAAAGTTGGAAATTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR GCA 90 bp | ACTCTGAAAGCACATGGCACACCTAAAACATCATCTTCCTTCGTTAAGAACCCTGAGAGCTGCCGGGGATaGGGGCAGCCGAAGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLKAHGTPKTSSSFVKNPESCRG*GQPKSA Trigger: CGCGCTCTTCGGCTGCCCGCATCCCCGGCAGCTCTC...AGGGTTCTTAACGAAGGAAGATGATGTTTTAGGTGTGCCATGTGCTTTCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTGGTTCCTTCACAACGATGATCAAAGCACCTATCTaGGCCTCCATCTCTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ELQSPAQLRTVSGSFTTMIKAPI*ASISCL Trigger: CAGGCAAGAGATGGAGGCTCAGATAGGTGCTTTGAT...CATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATTGGCATCCTCGCTGCTaGGCTGTTGTCTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDWHPRC*AVVSAV Trigger: GACTGCAGAGACAACAGCCCAGCAGCGAGGATGCCA...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CAA 72 bp | CTCAGAGAGAATGTAGTGGAAGGGACGGATGCGCTGTaGGACTGGACTGGTTGCATCAAGATTGCTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRENVVEGTDAL*DWTGCIKIAAE Trigger: CTCAGCAGCAATCTTGATGCAACCAGTCCAGTCCAACAGCGCATCCGTCCCTTCCACTACATTCTCTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CAA 72 bp | CTTCGTTCACGTTCTGTTCTAGGTTTGTGGGCAGGGTaGCACTGTACAGCCCTGTCTACAGCTCACGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSRSVLGLWAG*HCTALSTAHGN Trigger: ATTGCCGTGAGCTGTAGACAGGGCTGTACAGTGCAACCCTGCCCACAAACCTAGAACAGAACGTGAACGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTGGTTCCTTCACAACGATGGCAATAGACTCAGTCTaGCGATCACAAAGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: ELQSPAQLRTVSGSFTTMAIDSV*RSQSGL Trigger: GAGTCCACTTTGTGATCGTCAGACTGAGTCTATTGC...CATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | ACTTTAGGAGGGGCCAGTGGCTGTCTTTGGGTAATGACTATTATCCTGTACCCACTGGGCTGTTGTCTCTaGAGTCCCTTCCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLGGASGCLWVMTIILYPLGCCL*SPFQLA Trigger: AGCCAGCTGGAAGGGACTGCAGAGACAACAGCCCAG...TGGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTTGGCATCCTCGCTGCTaGGCTGTTGTCTCTGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTWHPRC*AVVSAV Trigger: GACTGCAGAGACAACAGCCCAGCAGCGAGGATGCCA...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AATTCCAATTTCCAACTTTTTCCAGCATACACTTCGTTCACGTTCTGTTCTAGGCGGCTGAGGACGTGCTaGGGGACCGGCCTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSNFQLFPAYTSFTFCSRRLRTC*GTGLSR Trigger: CCTGGACAGGCCGGTCCCCCAGCACGTCCTCAGCCG...CCTAGAACAGAACGTGAACGAAGTGTATGCTGGAAAAAGTTGGAAATTGGAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGGCTGCAGATCTCCAGTGGTaGTTCTCCAGGACTGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CAQAFTHGFTLKFSPKMAADLQW*FSRTEE Trigger: TTCCTCAGTCCTGGAGAATCACCACTGGAGATCTGC...AGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | GCATACACTTCGTTCACGTTCTGTTCTAGGTTTGTGGGCAGGGTTGCACTGTACTTCTGTTTCAAATCCTaGTCGGCTCCTCACGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AYTSFTFCSRFVGRVALYFCFKS*SAPHAD Trigger: GTCCGCGTGAGGAGCCGAGCAGGATTTGAAACAGAA...GTACAGTGCAACCCTGCCCACAAACCTAGAACAGAACGTGAACGAAGTGTATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR GCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATCCTCCATCTCTTGCCTaGTTTCCAATGGCAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDPPSLA*FPMASV Trigger: CACACTTGCCATTGGAAAGCAGGCAAGAGATGGAGG...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | TCCAACTTTTTCCAGCATACACTTCGTTCACGTTCTGTTCTAGGTTTGTGGGCAGGGCGTACCAGAGTGTaGCACCACACTCTGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNFFQHTLRSRSVLGLWAGRTRV*HHTLLS Trigger: TGAGAGCAGAGTGTGGTGGCACACTCTGGTACGCCC...TGCCCACAAACCTAGAACAGAACGTGAACGAAGTGTATGCTGGAAAAAGTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR CCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATCGGCTGATTAACACCTaGGTGATCCAGATCGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDRLINT*VIQIVS Trigger: ACTCACGATCTGGATCACCCAGGTGTTAATCAGCCG...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | GAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTGGTTCCTTCACAACGATGTTCCCAGTTCCGACATaGGTTACAAATATCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ELQSPAQLRTVSGSFTTMFPVPT*VTNIST Trigger: TGTGCTGATATTTGTAACCCATGTCGGAACTGGGAA...CATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | TGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTGAGTTGAGGACTCAAATGCAGCATTaGCATCCTCGCTGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WHTPLIVGPRSREVSELRTQMQH*HPRCWA Trigger: AGCCCAGCAGCGAGGATGCCAATGCTGCATTTGAGT...CCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTACTCAAATGCAGCATTaGCATCCTCGCTGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTTQMQH*HPRCWA Trigger: AGCCCAGCAGCGAGGATGCCAATGCTGCATTTGAGT...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTATCAAAGCACCTATCTaGGCCTCCATCTCTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTIKAPI*ASISCL Trigger: CAGGCAAGAGATGGAGGCTCAGATAGGTGCTTTGAT...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | TGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGGCTGCAATAGACTCAGTCTaGCGATCACAAAGTGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CAQAFTHGFTLKFSPKMAAIDSV*RSQSGL Trigger: GAGTCCACTTTGTGATCGTCAGACTGAGTCTATTGC...AGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | GAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTGGTTCCTTCACAACGATGGATAACCGATTTTCCTaGGTTAGTAACTGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELQSPAQLRTVSGSFTTMDNRFS*VSNCEF Trigger: GAACTCACAGTTACTAACTCAGGAAAATCGGTTATC...CATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | TTGGGTAATGACTATTATCCTGTACCCATGCTAATAGGAGAGCCGAATGTGGGCTTCTGTTTCAAATCCTaGTCGGCTCCTCACGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGNDYYPVPMLIGEPNVGFCFKS*SAPHAD Trigger: GTCCGCGTGAGGAGCCGAGCAGGATTTGAAACAGAA...GCCCACATTCGGCTCTCCTATTAGCATGGGTACAGGATAATAGTCATTACCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | GAGCTGCAGTCTCCAGCTCAGCTGAGAACGGTCAGTGGTTCCTTCACAACGATGACTTTTTCACTCCACTaGTTGCTTAATTCCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ELQSPAQLRTVSGSFTTMTFSLH*LLNSQF Trigger: GAACTGGGAATTAAGCAAGCAGTGGAGTGAAAAAGT...CATCGTTGTGAAGGAACCACTGACCGTTCTCAGCTGAGCTGGAGACTGCAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | AGAACAAACCAGATTCTCTTAACAAGCCCACTGCAGATCTCCAGTGGTGATTCTTTCTGTTTCAAATCCTaGTCGGCTCCTCACGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RTNQILLTSPLQISSGDSFCFKS*SAPHAD Trigger: GTCCGCGTGAGGAGCCGAGCAGGATTTGAAACAGAA...AGAATCACCACTGGAGATCTGCAGTGGGCTTGTTAAGAGAATCTGGTTTGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149081.8 |
||
| CDS-3UTR GCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATTTTCACTCCACTGCTTaGTTAATTCCCAGTTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDFHSTA*LIPSSD Trigger: GTCGGAACTGGGAATTAAGCAAGCAGTGGAGTGAAA...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTGATCCAGATCGTGAGTaGCGGCTGCAATTAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTDPDRE*RLQLNS Trigger: TGAGTTTAATTGCAGCCGCCACTCACGATCTGGATC...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | ACTTTAGGAGGGGCCAGTGGCTGTCTTTGGGTAATGACTATTATCCTGTACCCAGATCCAGATCGTGAGTaGCGGCTGCAATTAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLGGASGCLWVMTIILYPDPDRE*RLQLNS Trigger: TGAGTTTAATTGCAGCCGCCACTCACGATCTGGATC...TGGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | AAACTTTGTGTCCCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTTCTGTTTCAAATCCTaGTCGGCTCCTCACGCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLCVPCSEFLLRKPADPNFCFKS*SAPHAD Trigger: GTCCGCGTGAGGAGCCGAGCAGGATTTGAAACAGAA...ATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | CCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTTGGCTTCTGAACCTCCATCTCTTGCCTaGTTTCCAATGGCAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCSEFLLRKPADPNLASEPPSLA*FPMASV Trigger: CACACTTGCCATTGGAAAGCAGGCAAGAGATGGAGG...TTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTTTTCACTCCACTGCTTaGTTAATTCCCAGTTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTFHSTA*LIPSSD Trigger: GTCGGAACTGGGAATTAAGCAAGCAGTGGAGTGAAA...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | GTTCTTAGGACACAATGGCTGCAGTTTCAAAGTTATGCTTCAAAAACATGGCAACTGGGCTGTTGTCTCTaGAGTCCCTTCCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLRTQWLQFQSYASKTWQLGCCL*SPFQLA Trigger: AGCCAGCTGGAAGGGACTGCAGAGACAACAGCCCAG...TTGCCATGTTTTTGAAGCATAACTTTGAAACTGCAGCCATTGTGTCCTAAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCTGACGATCACAAAGTaGACTCACACCCAAATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTLTITK*THTQMV Trigger: TACCATTTGGGTGTGAGTCCACTTTGTGATCGTCAG...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | ACTCTGAAAGCACATGGCACACCTAAAACATCATCTTCCTTCGTTAAGAACCCTGCAGTCCCTTCCAGCTaGCTTTATTCAGCCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TLKAHGTPKTSSSFVKNPAVPSS*LYSAPH Trigger: ATGTGGGGCTGAATAAAGCCAGCTGGAAGGGACTGC...AGGGTTCTTAACGAAGGAAGATGATGTTTTAGGTGTGCCATGTGCTTTCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | ACTTTAGGAGGGGCCAGTGGCTGTCTTTGGGTAATGACTATTATCCTGTACCCAAAACTCGTGAGGATCTaGGATATCGCTGGAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLGGASGCLWVMTIILYPKLVRI*DIAGNL Trigger: TAAGTTTCCAGCGATATCTCAGATCCTCACGAGTTT...TGGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGATCTGAGATATCGCTaGAAACTTAGTAACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDDLRYR*KLSNLL Trigger: CAGAAGGTTACTAAGTTTCCAGCGATATCTCAGATC...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | GCATACACTTCGTTCACGTTCTGTTCTAGGTTTGTGGGCAGGGTTGCACTGTACGATCTGAGATATCGCTaGAAACTTAGTAACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AYTSFTFCSRFVGRVALYDLRYR*KLSNLL Trigger: CAGAAGGTTACTAAGTTTCCAGCGATATCTCAGATC...GTACAGTGCAACCCTGCCCACAAACCTAGAACAGAACGTGAACGAAGTGTATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR CCA 90 bp | AAACTTTGTGTCCCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATCGGCTGATTAACACCTaGGTGATCCAGATCGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLCVPCSEFLLRKPADPNRLINT*VIQIVS Trigger: ACTCACGATCTGGATCACCCAGGTGTTAATCAGCCG...ATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | TGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGGCTTCTATATCTCCTTGGTaGAAGAATTCCTCCGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: CAQAFTHGFTLKFSPKMASISPW*KNSSVT Trigger: AGTAACGGAGGAATTCTTCCACCAAGGAGATATAGA...AGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CAA 72 bp | GAAGACATCTTGATAGATAATGCTGGCATCATCCCCTaGGAAACCTCAGCAGTCAGAACCAGTTCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: EDILIDNAGIIP*ETSAVRTSSST Trigger: AGTGGAAGAACTGGTTCTGACTGCTGAGGTTTCCAAGGGGATGATGCCAGCATTATCTATCAAGATGTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | TTGGGTAATGACTATTATCCTGTACCCATGCTAATAGGAGAGCCGAATGTGGGCTTCCAATGGCAAGTGTaGGAACAAACCAGATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGNDYYPVPMLIGEPNVGFQWQV*EQTRFS Trigger: AGAGAATCTGGTTTGTTCTCACACTTGCCATTGGAA...GCCCACATTCGGCTCTCCTATTAGCATGGGTACAGGATAATAGTCATTACCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTGATCTGAGATATCGCTaGAAACTTAGTAACCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTDLRYR*KLSNLL Trigger: CAGAAGGTTACTAAGTTTCCAGCGATATCTCAGATC...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | TGGCATACACCTTTAATAGTAGGACCCAGAAGCAGGGAGGTATCTGAGTTGAGGTCTATATCTCCTTGGTaGAAGAATTCCTCCGTTACT | + |
|
Preference number: 4 (lower is better) Translates to: WHTPLIVGPRSREVSELRSISPW*KNSSVT Trigger: AGTAACGGAGGAATTCTTCCACCAAGGAGATATAGA...CCTCAACTCAGATACCTCCCTGCTTCTGGGTCCTACTATTAAAGGTGTATGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCACTGACGATCACAAAGTaGACTCACACCCAAATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPLTITK*THTQMV Trigger: TACCATTTGGGTGTGAGTCCACTTTGTGATCGTCAG...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | CGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGTCATAAAACCAATCTaGATGTTGGCAATAGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVCPSLHTWLYTQVLSQDVIKPI*MLAIDS Trigger: TGAGTCTATTGCCAACATCCAGATTGGTTTTATGAC...ATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | GTTCTTAGGACACAATGGCTGCAGTTTCAAAGTTATGCTTCAAAAACATGGCAAGCAGTCCCTTCCAGCTaGCTTTATTCAGCCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VLRTQWLQFQSYASKTWQAVPSS*LYSAPH Trigger: ATGTGGGGCTGAATAAAGCCAGCTGGAAGGGACTGC...TTGCCATGTTTTTGAAGCATAACTTTGAAACTGCAGCCATTGTGTCCTAAGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| 3UTR CAA 72 bp | ATATGCTGTCACTTTAGGAGGGGCCAGTGGCTGTCTTaGGGTAATGACTATTATCCTGTACCCATGCTAATA | + |
|
Preference number: 4 (lower is better) Translates to: ICCHFRRGQWLS*GNDYYPVPMLI Trigger: TATTAGCATGGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGTGACAGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCAAAACTCGTGAGGATCTaGGATATCGCTGGAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPKLVRI*DIAGNL Trigger: TAAGTTTCCAGCGATATCTCAGATCCTCACGAGTTT...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCATTCCAATGGCAAGTGTaGGAACAAACCAGATTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPFQWQV*EQTRFS Trigger: AGAGAATCTGGTTTGTTCTCACACTTGCCATTGGAA...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | AAACTTTGTGTCCCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATGTCTGCAGCATGGACTaGATTGTGGTAAGGATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLCVPCSEFLLRKPADPNVCSMD*IVVRIL Trigger: CAAAATCCTTACCACAATGCAGTCCATGCTGCAGAC...ATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | AATTCCAATTTCCAACTTTTTCCAGCATACACTTCGTTCACGTTCTGTTCTAGGTGTGCCACCACACTCTaGTCTCAGCCTCTTCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSNFQLFPAYTSFTFCSRCATTL*SQPLLS Trigger: ACTAAGAAGAGGCTGAGAGCAGAGTGTGGTGGCACA...CCTAGAACAGAACGTGAACGAAGTGTATGCTGGAAAAAGTTGGAAATTGGAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCAGCAGTCAGAACCAGTTCTTCCACTCAAGACCATTTCACATTTCCACAATTCCCAGTTCCGACATaGGTTACAAATATCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TSAVRTSSSTQDHFTFPQFPVPT*VTNIST Trigger: TGTGCTGATATTTGTAACCCATGTCGGAACTGGGAA...TTGTGGAAATGTGAAATGGTCTTGAGTGGAAGAACTGGTTCTGACTGCTGAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | ACTTTAGGAGGGGCCAGTGGCTGTCTTTGGGTAATGACTATTATCCTGTACCCATTTTCTATATCTCCTTaGTGGAAGAATTCCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLGGASGCLWVMTIILYPFSISP*WKNSSV Trigger: AACGGAGGAATTCTTCCACCAAGGAGATATAGAAAA...TGGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AACAGGCACGTGTTTAAACGAGTGTGCCCAAGCCTTCACACATGGCTTTACACTGTCATAAAACCAATCTaGATGTTGGCAATAGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRHVFKRVCPSLHTWLYTVIKPI*MLAIDS Trigger: TGAGTCTATTGCCAACATCCAGATTGGTTTTATGAC...AGTGTAAAGCCATGTGTGAAGGCTTGGGCACACTCGTTTAAACACGTGCCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| 3UTR CAA 72 bp | TGCTTTAGGAAACTTTGTGTCCCTTGCTCAGAATTCTaGCTGAGGAAACCAGCTGATCCTAATTTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFRKLCVPCSEF*LRKPADPNLAS Trigger: AGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGGGACACAAAGTTTCCTAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR GCA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCAACTTTTTCACTCCACTaGTTGCTTAATTCCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPTFSLH*LLNSQF Trigger: GAACTGGGAATTAAGCAAGCAGTGGAGTGAAAAAGT...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | CCAATTTCCAACTTTTTCCAGCATACACTTCGTTCACGTTCTGTTCTAGGTTTGAAACTCGTGAGGATCTaGGATATCGCTGGAAACTTA | + |
|
Preference number: 4 (lower is better) Translates to: PISNFFQHTLRSRSVLGLKLVRI*DIAGNL Trigger: TAAGTTTCCAGCGATATCTCAGATCCTCACGAGTTT...CAAACCTAGAACAGAACGTGAACGAAGTGTATGCTGGAAAAAGTTGGAAATTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTTACACTTCTAATCCTTTCCCACATGGATGGACAGAACATGCACAGCCATTTTCTATATCTCCTTaGTGGAAGAATTCCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTYTSNPFPHGWTEHAQPFSISP*WKNSSV Trigger: AACGGAGGAATTCTTCCACCAAGGAGATATAGAAAA...TGGCTGTGCATGTTCTGTCCATCCATGTGGGAAAGGATTAGAAGTGTAAGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR TCA 90 bp | GTTCTTAGGACACAATGGCTGCAGTTTCAAAGTTATGCTTCAAAAACATGGCAAGATAACCGATTTTCCTaGGTTAGTAACTGTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLRTQWLQFQSYASKTWQDNRFS*VSNCEF Trigger: GAACTCACAGTTACTAACTCAGGAAAATCGGTTATC...TTGCCATGTTTTTGAAGCATAACTTTGAAACTGCAGCCATTGTGTCCTAAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AATTTCCAACTTTTTCCAGCATACACTTCGTTCACGTTCTGTTCTAGGTTTGTGTATGACTCTTTCCACTaGCTCAAATATTCTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFQLFPAYTSFTFCSRFVYDSFH*LKYSLG Trigger: GCCAAGAGAATATTTGAGCCAGTGGAAAGAGTCATA...CACAAACCTAGAACAGAACGTGAACGAAGTGTATGCTGGAAAAAGTTGGAAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| 3UTR CAA 72 bp | TCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTaGGCTTCTGAAGATTTACCTAAAGGGAGAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SEFLLRKPADPN*ASEDLPKGRKI Trigger: AATCTTTCTCCCTTTAGGTAAATCTTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CCA 90 bp | AATTCCAATTTCCAACTTTTTCCAGCATACACTTCGTTCACGTTCTGTTCTAGGGCTCAAATATTCTCTTaGCTTGTCCATTGTAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NSNFQLFPAYTSFTFCSRAQIFS*LVHCNP Trigger: AGGATTACAATGGACAAGCCAAGAGAATATTTGAGC...CCTAGAACAGAACGTGAACGAAGTGTATGCTGGAAAAAGTTGGAAATTGGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| 3UTR CAA 72 bp | AGACTTTTCTTTGCAGTTATCAGATACTGTGTGAACTaGTTTAAGGTAATGTTAGCTTGCAGGAGACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFFAVIRYCVN*FKVMLACRRLP Trigger: AGGAAGTCTCCTGCAAGCTAACATTACCTTAAACAAGTTCACACAGTATCTGATAACTGCAAAGAAAAGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS CCA 90 bp | TGGCATCCTCGCTGCTGGGCTGTTGTCTCTGCAGTCCCTTCCAGCTaGCTTTATTCAGCCCCACATGTCCAAGCATCGTCTGTGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: WHPRCWAVVSAVPSS*LYSAPHVQASSVTA Trigger: GGCTGTCACAGACGATGCTTGGACATGTGGGGCTGAATAAAGCCAGCTGGAAGGGACTGCAGAGACAACAGCCCAGCAGCGAGGATGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS GCA 90 bp | AACTCAAATGCAGCATTGGCATCCTCGCTGCTGGGCTGTTGTCTCTaGAGTCCCTTCCAGCTGGCTTTATTCAGCCCCACATGTCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NSNAALASSLLGCCL*SPFQLALFSPTCPS Trigger: GCTTGGACATGTGGGGCTGAATAAAGCCAGCTGGAAGGGACTGCAGAGACAACAGCCCAGCAGCGAGGATGCCAATGCTGCATTTGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS GCA 90 bp | TCAGCCTCCCAAGAATGGGGCGTACCAGAGTGTGCCACCACACTCTaGTCTCAGCCTCTTCTTAGTTATGACTCTTTCCACTGGCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SASQEWGVPECATTL*SQPLLSYDSFHWLK Trigger: TTTGAGCCAGTGGAAAGAGTCATAACTAAGAAGAGGCTGAGAGCAGAGTGTGGTGGCACACTCTGGTACGCCCCATTCTTGGGAGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
||
| CDS CCA 90 bp | GTAACTGTGAGTTCAACTCAAATGCAGCATTGGCATCCTCGCTGCTaGGCTGTTGTCTCTGCAGTCCCTTCCAGCTGGCTTTATTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VTVSSTQMQHWHPRC*AVVSAVPSSWLYSA Trigger: GGCTGAATAAAGCCAGCTGGAAGGGACTGCAGAGACAACAGCCCAGCAGCGAGGATGCCAATGCTGCATTTGAGTTGAACTCACAGTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CAA 90 bp | TGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGGCTAACTCAAATGCAGCATaGGCATCCTCGCTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CAQAFTHGFTLKFSPKMANSNAA*ASSLLG Trigger: GCCCAGCAGCGAGGATGCCAATGCTGCATTTGAGTT...AGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS CCA 90 bp | GATTTTCCTGAGTTAGTAACTGTGAGTTCAACTCAAATGCAGCATTaGCATCCTCGCTGCTGGGCTGTTGTCTCTGCAGTCCCTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DFPELVTVSSTQMQH*HPRCWAVVSAVPSS Trigger: GCTGGAAGGGACTGCAGAGACAACAGCCCAGCAGCGAGGATGCCAATGCTGCATTTGAGTTGAACTCACAGTTACTAACTCAGGAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
||
| CDS-3UTR CAA 90 bp | ACTTTAGGAGGGGCCAGTGGCTGTCTTTGGGTAATGACTATTATCCTGTACCCACTGAGCCTCCATCTCTaGCCTGCTTTCCAATGGCAA | + |
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Preference number: 5 (lower is better) Translates to: TLGGASGCLWVMTIILYPLSLHL*PAFQWQ Trigger: TTGCCATTGGAAAGCAGGCAAGAGATGGAGGCTCAG...TGGGTACAGGATAATAGTCATTACCCAAAGACAGCCACTGGCCCCTCCTAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| CDS-3UTR CAA 90 bp | TTGGGTAATGACTATTATCCTGTACCCATGCTAATAGGAGAGCCGAATGTGGGCAACTCAAATGCAGCATaGGCATCCTCGCTGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: LGNDYYPVPMLIGEPNVGNSNAA*ASSLLG Trigger: GCCCAGCAGCGAGGATGCCAATGCTGCATTTGAGTT...GCCCACATTCGGCTCTCCTATTAGCATGGGTACAGGATAATAGTCATTACCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| CDS GCA 90 bp | TTAGTAACTGTGAGTTCAACTCAAATGCAGCATTGGCATCCTCGCTaGTGGGCTGTTGTCTCTGCAGTCCCTTCCAGCTGGCTTTATTCA | + |
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Preference number: 5 (lower is better) Translates to: LVTVSSTQMQHWHPR*WAVVSAVPSSWLYS Trigger: TGAATAAAGCCAGCTGGAAGGGACTGCAGAGACAACAGCCCAGCAGCGAGGATGCCAATGCTGCATTTGAGTTGAACTCACAGTTACTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| CDS CCA 90 bp | CAAACTGTGGCACCCCGAAAAACTCGTGAGGATCTGAGATATCGCTaGAAACTTAGTAACCTTCTGATGTTCCTGGCGGAGACTGATGCT | + |
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Preference number: 5 (lower is better) Translates to: QTVAPRKTREDLRYR*KLSNLLMFLAETDA Trigger: AGCATCAGTCTCCGCCAGGAACATCAGAAGGTTACTAAGTTTCCAGCGATATCTCAGATCCTCACGAGTTTTTCGGGGTGCCACAGTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 ENSMUST00000156652.8 |
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| CDS-3UTR CAA 90 bp | ACCTCAGCAGTCAGAACCAGTTCTTCCACTCAAGACCATTTCACATTTCCACAATTAGAGGTGATCCACTaGATCAGAACCAAAGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: TSAVRTSSSTQDHFTFPQLEVIH*IRTKAR Trigger: TCTGGCTTTGGTTCTGATCAAGTGGATCACCTCTAA...TTGTGGAAATGTGAAATGGTCTTGAGTGGAAGAACTGGTTCTGACTGCTGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091314.11 |
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| CDS-3UTR CAA 90 bp | TGTGCCCAAGCCTTCACACATGGCTTTACACTCAAGTTCTCTCCCAAGATGGCTTGCTTCAATGTCAGATaGAGAGTGAAAAATACGGAA | + |
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Preference number: 5 (lower is better) Translates to: CAQAFTHGFTLKFSPKMACFNVR*RVKNTE Trigger: TTCCGTATTTTTCACTCTCAATCTGACATTGAAGCA...AGCCATCTTGGGAGAGAACTTGAGTGTAAAGCCATGTGTGAAGGCTTGGGCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| CDS-3UTR CAA 90 bp | CCTTGCTCAGAATTCTTGCTGAGGAAACCAGCTGATCCTAATTTGGCTTCTGAATGCTTCAATGTCAGATaGAGAGTGAAAAATACGGAA | + |
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Preference number: 5 (lower is better) Translates to: PCSEFLLRKPADPNLASECFNVR*RVKNTE Trigger: TTCCGTATTTTTCACTCTCAATCTGACATTGAAGCA...TTCAGAAGCCAAATTAGGATCAGCTGGTTTCCTCAGCAAGAATTCTGAGCAAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| CDS-3UTR CAA 90 bp | ACTCTGAAAGCACATGGCACACCTAAAACATCATCTTCCTTCGTTAAGAACCCTTTTTTCTATATCTCCTaGGTGGAAGAATTCCTCCGT | + |
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Preference number: 5 (lower is better) Translates to: TLKAHGTPKTSSSFVKNPFFYIS*VEEFLR Trigger: ACGGAGGAATTCTTCCACCAAGGAGATATAGAAAAA...AGGGTTCTTAACGAAGGAAGATGATGTTTTAGGTGTGCCATGTGCTTTCAGAGT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| CDS-3UTR CAA 90 bp | CCAATTTCCAACTTTTTCCAGCATACACTTCGTTCACGTTCTGTTCTAGGTTTGTGCTTCAATGTCAGATaGAGAGTGAAAAATACGGAA | + |
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Preference number: 5 (lower is better) Translates to: PISNFFQHTLRSRSVLGLCFNVR*RVKNTE Trigger: TTCCGTATTTTTCACTCTCAATCTGACATTGAAGCA...CAAACCTAGAACAGAACGTGAACGAAGTGTATGCTGGAAAAAGTTGGAAATTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
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| CDS-3UTR CAA 90 bp | GTTCTTAGGACACAATGGCTGCAGTTTCAAAGTTATGCTTCAAAAACATGGCAATTTTTCTATATCTCCTaGGTGGAAGAATTCCTCCGT | + |
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Preference number: 5 (lower is better) Translates to: VLRTQWLQFQSYASKTWQFFYIS*VEEFLR Trigger: ACGGAGGAATTCTTCCACCAAGGAGATATAGAAAAA...TTGCCATGTTTTTGAAGCATAACTTTGAAACTGCAGCCATTGTGTCCTAAGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000099195.10 |
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| CDS GCA 72 bp | GCAGCATTGGCATCCTCGCTGCTGGGCTGTTGTCTCTaGAGTCCCTTCCAGCTGGCTTTATTCAGCCCCACA | + |
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Preference number: 6 (lower is better) Translates to: AALASSLLGCCL*SPFQLALFSPT Trigger: TGTGGGGCTGAATAAAGCCAGCTGGAAGGGACTGCAGAGACAACAGCCCAGCAGCGAGGATGCCAATGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| CDS GCA 72 bp | GTGAGTTCAACTCAAATGCAGCATTGGCATCCTCGCTaGTGGGCTGTTGTCTCTGCAGTCCCTTCCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VSSTQMQHWHPR*WAVVSAVPSSW Trigger: CCAGCTGGAAGGGACTGCAGAGACAACAGCCCAGCAGCGAGGATGCCAATGCTGCATTTGAGTTGAACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| CDS GCA 72 bp | CAAGAATGGGGCGTACCAGAGTGTGCCACCACACTCTaGTCTCAGCCTCTTCTTAGTTATGACTCTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QEWGVPECATTL*SQPLLSYDSFH Trigger: GTGGAAAGAGTCATAACTAAGAAGAGGCTGAGAGCAGAGTGTGGTGGCACACTCTGGTACGCCCCATTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
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| CDS CCA 72 bp | GCACCCCGAAAAACTCGTGAGGATCTGAGATATCGCTaGAAACTTAGTAACCTTCTGATGTTCCTGGCGGAG | + |
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Preference number: 6 (lower is better) Translates to: APRKTREDLRYR*KLSNLLMFLAE Trigger: CTCCGCCAGGAACATCAGAAGGTTACTAAGTTTCCAGCGATATCTCAGATCCTCACGAGTTTTTCGGGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 ENSMUST00000156652.8 |
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| CDS TCA 72 bp | ATAAAACCAATCTGGATGTTGGCAATAGACTCAGTCTaGCGATCACAAAGTGGACTCACACCCAAATGGTAC | + |
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Preference number: 6 (lower is better) Translates to: IKPIWMLAIDSV*RSQSGLTPKWY Trigger: GTACCATTTGGGTGTGAGTCCACTTTGTGATCGTCAGACTGAGTCTATTGCCAACATCCAGATTGGTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091314.11 ENSMUST00000099195.10 |
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| CDS CCA 72 bp | TGCTCTCAGCCTCTTCTTAGTTATGACTCTTTCCACTaGCTCAAATATTCTCTTGGCTTGTCCATTGTAATC | + |
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Preference number: 6 (lower is better) Translates to: CSQPLLSYDSFH*LKYSLGLSIVI Trigger: GATTACAATGGACAAGCCAAGAGAATATTTGAGCCAGTGGAAAGAGTCATAACTAAGAAGAGGCTGAGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156652.8 |
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