Pregenerated sensors for PDE6C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024992Ensembl transcript IDs: ENSMUST00000025956.13, ENSMUST00000112329.3
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGGGTTTCCAGGTCAGCAATGGATAATCTGTGGGTAGTCACATaGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCA | + |
|
Preference number: 1 (lower is better) Translates to: HRVSRSAMDNLWVVT*QNLWGSSSSVTSWS Trigger: TGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCTGGAAACCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR CCA 90 bp | GTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTaGTCACTGGACAGAACTCAATCAAGGAGGCTCTTTTGGATGTTT | + |
|
Preference number: 1 (lower is better) Translates to: VTWQNLWGSSSSVTS*SLDRTQSRRLFWMF Trigger: AAACATCCAAAAGAGCCTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR CCA 90 bp | CTTTATTTAGCTCACAGGGTTTCCAGGTCAGCAATGGATAATCTGTaGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTC | + |
|
Preference number: 1 (lower is better) Translates to: LYLAHRVSRSAMDNL*VVTWQNLWGSSSSV Trigger: GACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCTGGAAACCCTGTGAGCTAAATAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR CAA 90 bp | AGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTaGGTCACTGGACAGAACTCAATCAAGGAGGCTCTTTTGGATGTT | + |
|
Preference number: 2 (lower is better) Translates to: SHMAESLGLFLFCHF*VTGQNSIKEALLDV Trigger: AACATCCAAAAGAGCCTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR-3UTR TCA 90 bp | AATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCGTGGAAACTAAGATaGTACTTGAAATACAGACCA | + |
|
Preference number: 2 (lower is better) Translates to: NLWGSSSSVTSWSLDRTQSWKLR*YLKYRP Trigger: TGGTCTGTATTTCAAGTATCATCTTAGTTTCCACGA...TTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR-3UTR CCA 90 bp | TTTGTTTTTACTAAACTTTATTTAGCTCACAGGGTTTCCAGGTCAGCAATGGATTCACTTCTTGGTCACTaGACAGAACTCAATCAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: FVFTKLYLAHRVSRSAMDSLLGH*TELNQG Trigger: TCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGA...ATCCATTGCTGACCTGGAAACCCTGTGAGCTAAATAAAGTTTAGTAAAAACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR CCA 72 bp | TCCAGGTCAGCAATGGATAATCTGTGGGTAGTCACATaGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: SRSAMDNLWVVT*QNLWGSSSSVT Trigger: AGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR CCA 72 bp | TCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTaGACAGAACTCAATCAAGGAGGCTCTTTTGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: SGALPLLSLLGH*TELNQGGSFGC Trigger: ACATCCAAAAGAGCCTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR CCA 72 bp | CAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTaGTCACTGGACAGAACTCAATCAAGGAGGCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QNLWGSSSSVTS*SLDRTQSRRLF Trigger: AAAGAGCCTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR CCA 72 bp | ATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTaGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: MDNLWVVTWQNL*GSSSSVTSWSL Trigger: CAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | TGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGAGCGAGCCTCTGCAGTaGCCGGTGAGCCATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WVVTWQNLWGSSSSVTSWSEPLQ*PVSHLL Trigger: GAGCAGATGGCTCACCGGGCACTGCAGAGGCTCGCT...CCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | CTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTCAGCAAGGACCTCCTTaGCTGCCACGATCGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LWVVTWQNLWGSSSSVTSQQGPP*LPRSGL Trigger: CAGTCCCGATCGTGGCAGGCAAGGAGGTCCTTGCTG...AGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | GGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCGCCAGTTGTGGTAGGTaGCAGGACGGTACCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSHMAESLGLFLFCHFLVASCGR*QDGTLS Trigger: GGAAAGGGTACCGTCCTGTCACCTACCACAACTGGC...GACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTCTGTCCATCATAGGCTaGCTCTGCACCTCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSAMDNLWVVTWQNLWGSLSIIG*LCTSQG Trigger: GCCCTGGGAGGTGCAGAGTCAGCCTATGATGGACAG...AGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | TCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCAGGCCACCTCTGGTATaGCGTTTCTTGCTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: SAMDNLWVVTWQNLWGSSRPPLV*RFLLCT Trigger: CGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCT...GGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCACCTGGAGGCCACCTCTaGTATGCCGTTTCTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESLGLFLFCHFLVTGQNSPGGHL*YAVSCS Trigger: AGAGCAAGAAACGGCATACCAGAGGTGGCCTCCAGG...TGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | TCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCCTAACAAGCGTCCAGTaGTCTGCTGGAGGTGACGGA | + |
|
Preference number: 4 (lower is better) Translates to: SAMDNLWVVTWQNLWGSSLTSVQ*SAGGDG Trigger: TCCGTCACCTCCAGCAGACCACTGGACGCTTGTTAG...GGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | GGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCTTTTGTTCACTGCCATaGCCACAGCAAGGACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSHMAESLGLFLFCHFLVFCSLP*PQQGPP Trigger: AGGAGGTCCTTGCTGTGGTCATGGCAGTGAACAAAA...GACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCCGTTCAGCATGGGTGTaGTCTCTCCATGAAACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SAMDNLWVVTWQNLWGSSRSAWV*SLHETE Trigger: CTCGGTTTCATGGAGAGATCACACCCATGCTGAACG...GGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGGCCGGTCTGGACCCCTaGATGGCTGTTTTTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLFLFCHFLVTGQNSIKEAGLDP*MAVFED Trigger: ATCTTCAAAAACAGCCATGCAGGGGTCCAGACCGGC...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGAAGCAGCAGCGAGCATaGCAAAGGCTTCAAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLFLFCHFLVTGQNSIKEKQQRA*QRLQGL Trigger: CAGACCTTGAAGCCTTTGCCATGCTCGCTGCTGCTT...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | AGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTAGTTCAGGTACGTCCTaGTGGTGTACAGTGCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSAMDNLWVVTWQNLWGSSSGTS*WCTVPC Trigger: ACAAGGCACTGTACACCATCAGGACGTACCTGAACT...AGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | GTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGCTGTCATTAACAAAGTaGACATGGTCTGCCCCACGT | + |
|
Preference number: 4 (lower is better) Translates to: VTWQNLWGSSSSVTSWSLLSLTK*TWSAPR Trigger: ACGTGGGGCAGACCATGTTCACTTTGTTAATGACAG...CAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGGGTGTGATCTCTCCATaGAACCGAGAGAACTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WVVTWQNLWGSSSSVTSWGVISP*NRENSL Trigger: TAAGGAGTTCTCTCGGTTTCATGGAGAGATCACACC...CCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGGGCAGCTTTTCCATCTaGGGCTTCTTCTTCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLFLFCHFLVTGQNSIKEGSFSI*GFFFLL Trigger: AAGCAGGAAGAAGAAGCCTCAGATGGAAAAGCTGCC...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | GAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCACCTGATGGTGTACAGTaGCTTGTGAAACTGTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLGLFLFCHFLVTGQNSPDGVQ*LVKLSL Trigger: GAGCGACAGTTTCACAAGGCACTGTACACCATCAGG...TGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | GGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCAGTCCCATGAAGCCTTaGAAGTGGAGATGTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: GSHMAESLGLFLFCHFLVSPMKP*KWRCGL Trigger: AAGTCCACATCTCCACTTGCAAGGCTTCATGGGACT...GACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAGTCTGGACCCCTGCATaGCTGTTTTTGAAGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: ESLGLFLFCHFLVTGQNSVWTPA*LFLKIT Trigger: GGTGATCTTCAAAAACAGCCATGCAGGGGTCCAGAC...TGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCCTCAAACTTAGAAGTTaGGGTGACGTTCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSHMAESLGLFLFCHFLVLKLRS*GDVQQP Trigger: AGGCTGCTGAACGTCACCCCAACTTCTAAGTTTGAG...GACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| 3UTR CAA 72 bp | GCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTaGGTCACTGGACAGAACTCAATCAAGGAGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AESLGLFLFCHF*VTGQNSIKEAL Trigger: AAGAGCCTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCGTGTACAGTGCCTTGTaGAACTGTCGCTCAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SAMDNLWVVTWQNLWGSSVYSAL*NCRSTS Trigger: TGATGTTGAGCGACAGTTTCACAAGGCACTGTACAC...GGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | GGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCCAACTTCTCCAAGCTTaGTTGGCCACTCATCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSHMAESLGLFLFCHFLVQLLQA*LATHRK Trigger: TTTACGATGAGTGGCCAATCAAGCTTGGAGAAGTTG...GACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGGTCCTTTCTGAAATGTaGAGTACTCATCTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLFLFCHFLVTGQNSIKEVLSEM*STHLQG Trigger: CCCCTGCAGATGAGTACTTCACATTTCAGAAAGGAC...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | TGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGAAAATGGAAGTCCCATaGAGCCTTGCAAGTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WVVTWQNLWGSSSSVTSWKMEVP*SLASGD Trigger: ATCTCCACTTGCAAGGCTTCATGGGACTTCCATTTT...CCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGGCTCTTTTGTCTTCGGCGCTaGCTCCTAAATCTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSVTSWSLDRTQSRRLFCLRR*LLNLWQ Trigger: CTGCCACAGATTTAGGAGGCAGCGCCGAAGACAAAA...GAGCCTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGAGTCCTCCTTCAATATaGCCAGGAGCTGTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLFLFCHFLVTGQNSIKESPPSI*PGAVSL Trigger: AAGAGAGACAGCTCCTGGCCATATTGAAGGAGGACT...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | TGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGGCAACCTCGAACAAATaGATCACCGTTTCAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WVVTWQNLWGSSSSVTSWATSNK*ITVSNC Trigger: GCAGTTTGAAACGGTGATCCATTTGTTCGAGGTTGC...CCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | ACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACGAATACTTTATTGGCTaGCCACATAAGGATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TWQNLWGSSSSVTSWSLDEYFIG*PHKDLA Trigger: AGCCAGATCCTTATGTGGTCAGCCAATAAAGTATTC...GTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | GGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCGTCGCTCAACATCAGTaGGCTCTTCGAATACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSHMAESLGLFLFCHFLVVAQHQ*ALRILY Trigger: ATAAAGTATTCGAAGAGCTCACTGATGTTGAGCGAC...GACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGCCTCTACAGGGACTTTaGATTTCTCCACCACGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GLFLFCHFLVTGQNSIKEPLQGL*ISPPRL Trigger: TAAACGTGGTGGAGAAATTCAAAGTCCCTGTAGAGG...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | GAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAGAGCAATGTCCTTTCTaGTTTCCAGCTTGTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLGLFLFCHFLVTGQNSEQCPF*FPACSL Trigger: GAGTGAACAAGCTGGAAAGCAGAAAGGACATTGCTC...TGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGGCCATCTGGAGTCTTTaGTCCTTTATAAGGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLFLFCHFLVTGQNSIKEAIWSL*SFIRLN Trigger: GTTGAGCCTTATAAAGGACCAAAGACTCCAGATGGC...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGATTTCCCTGCCATCTaGAGTCTTTGGTCCTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: VTWQNLWGSSSSVTSWSLDFPAI*SLWSFI Trigger: TATAAAGGACCAAAGACTCCAGATGGCAGGGAAATC...CAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | CAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTGATGTCGCTCTAAAATaGAAGTCCCATGAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNLWGSSSSVTSWSLDRTDVALK*KSHEAL Trigger: CAAGGCTTCATGGGACTTCCATTTTAGAGCGACATC...AGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGTGCCTCCTAAATCTGTaGCAGCTTTTCCATCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRSAMDNLWVVTWQNLWCLLNL*QLFHLR Trigger: CCTCAGATGGAAAAGCTGCCACAGATTTAGGAGGCA...CCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCTGGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | AATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAACTAGCAGATTCCTGGTaGCATATCCAGTTTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NLWGSSSSVTSWSLDRTQLADSW*HIQFAC Trigger: ACAAGCAAACTGGATATGTCACCAGGAATCTGCTAG...TTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | CTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTCGGAGGTTACGTATTTaGTGGTTTCTTCTTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LWVVTWQNLWGSSSSVTSRRLRI*WFLLHF Trigger: AAAGTGAAGAAGAAACCATCAAATACGTAACCTCCG...AGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | AATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAAGAGTGCCAGGTCAGTTaGTATTATTGCAACCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: NLWGSSSSVTSWSLDRTQECQVS*YYCNLE Trigger: TTCGAGGTTGCAATAATAGCAACTGACCTGGCACTC...TTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATGAAGCCTTGCAAGTaGAGATGTGGACTTCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ESLGLFLFCHFLVTGQNSMKPCK*RCGLHL Trigger: CAAATGAAGTCCACATCTCCACTTGCAAGGCTTCAT...TGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | ACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACACATTAAGCATGTTTTaGACTTTTTGTCTTCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: TWQNLWGSSSSVTSWSLDTLSMF*TFCLRR Trigger: GCGCCGAAGACAAAAAGTCCAAAACATGCTTAATGT...GTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | CTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTGTTCTTTTTGACATCTaGGACATTAAGGGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LWVVTWQNLWGSSSSVTSVLFDI*DIKGFL Trigger: AAGAAAGCCCTTAATGTCTCAGATGTCAAAAAGAAC...AGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCGGGTTAAAGTCTCAGTaGTATGTTCATCATGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SAMDNLWVVTWQNLWGSSGLKSQ*YVHHAH Trigger: ATGAGCATGATGAACATATCACTGAGACTTTAACCC...GGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGTTTCTTCTTCACTTTaGATCTGCTCGCAGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: VSRSAMDNLWVVTWQNLWVSSSL*ICSQVS Trigger: TGATACCTGCGAGCAGATGCAAAGTGAAGAAGAAAC...CCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCTGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | TCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCGTATCAACGATCTTTTaGAACATGGTTCTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SAMDNLWVVTWQNLWGSSVSTIF*NMVLFL Trigger: CAAGAAGAGAACCATGTTTCAAAAGATCGTTGATAC...GGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | AGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTGATAAATCCATTTTCTaGAACGTATGTTGGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: RSAMDNLWVVTWQNLWGSDKSIF*NVCWQS Trigger: GGATTGCCAACATACGTTGCAGAAAATGGATTTATC...AGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | TCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCGTCAGTTGCTATTATTaGAACCTCGAACAAATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SAMDNLWVVTWQNLWGSSVSCYY*NLEQMD Trigger: ATCCATTTGTTCGAGGTTGCAATAATAGCAACTGAC...GGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGTGTCAAAATACTCTTTaGCAAAACAAGGGTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTWQNLWGSSSSVTSWSLCQNTL*QNKGSS Trigger: AGAAGAACCCTTGTTTTGCCAAAGAGTATTTTGACA...CAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCCAGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGTTCTCCAAGCTTGATTaGCCACTCATCGTAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSRSAMDNLWVVTWQNLWFSKLD*PLIVKF Trigger: GAATTTTACGATGAGTGGCCAATCAAGCTTGGAGAA...CCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCTGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGGCTCGACCATCCAAGAAACTaGGTTAAAGTCTCAGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSVTSWSLDRTQSRRLDHPRN*VKVSVI Trigger: TATCACTGAGACTTTAACCCAGTTTCTTGGATGGTC...GAGCCTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGCTTCTTGAAATAGAGTaGCAGGTCAGTTGCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSRSAMDNLWVVTWQNLWLLEIE*QVSCYY Trigger: ATAATAGCAACTGACCTGGCACTCTATTTCAAGAAG...CCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCTGGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CCA 90 bp | GAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCACGCTTGTTTAGATTCTaGAAGATGTTTAAACTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESLGLFLFCHFLVTGQNSRLFRF*KMFKLS Trigger: TGAGAGTTTAAACATCTTCCAGAATCTAAACAAGCG...TGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | GTTTCCAGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGTTTAAACTCTCATCCTaGAAGAGAGTCTTGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: VSRSAMDNLWVVTWQNLWFKLSS*KRVLLY Trigger: ATATAGCAAGACTCTCTTGCAGGATGAGAGTTTAAA...CCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCTGGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR TCA 90 bp | TTTGTTTTTACTAAACTTTATTTAGCTCACAGGGTTTCCAGGTCAGCAATGGATACATGGTTCTCTTCTTaGAATAGAGTGCCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FVFTKLYLAHRVSRSAMDTWFSS*NRVPGQ Trigger: CTGACCTGGCACTCTATTTCAAGAAGAGAACCATGT...ATCCATTGCTGACCTGGAAACCCTGTGAGCTAAATAAAGTTTAGTAAAAACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR GCA 90 bp | TTTGTTTTTACTAAACTTTATTTAGCTCACAGGGTTTCCAGGTCAGCAATGGATTGTGAAGTACTCATCTaGAGGGGCATTCAGCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FVFTKLYLAHRVSRSAMDCEVLI*RGIQHV Trigger: AACATGCTGAATGCCCCTGCAGATGAGTACTTCACA...ATCCATTGCTGACCTGGAAACCCTGTGAGCTAAATAAAGTTTAGTAAAAACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS GCA 90 bp | CATACTGCAGCAATCAGCCTGCAGAAGTTGAGCGAGCCTCTGCAGTaGCCGGTGAGCCATCTGCTCCGCGCTTCCGGCCTCGTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HTAAISLQKLSEPLQ*PVSHLLRASGLVLH Trigger: ATGCAGGACGAGGCCGGAAGCGCGGAGCAGATGGCTCACCGGGCACTGCAGAGGCTCGCTCAACTTCTGCAGGCTGATTGCTGCAGTATG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 90 bp | AGGCCACCTCTGGTATGCCGTTTCTTGCTCTGCACGAGAACATACTaGAGCAATCAGCCTGCAGAAGTTGAGCGAGCCTCTGCAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPLVCRFLLCTRTY*SNQPAEVERASAVP Trigger: GGGCACTGCAGAGGCTCGCTCAACTTCTGCAGGCTGATTGCTGCAGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 90 bp | CGTTCAGCAGCCTGGAGGCCACCTCTGGTATGCCGTTTCTTGCTCTaGACGAGAACATACTGCAGCAATCAGCCTGCAGAAGTTGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RSAAWRPPLVCRFLL*TRTYCSNQPAEVER Trigger: TCGCTCAACTTCTGCAGGCTGATTGCTGCAGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCTCCAGGCTGCTGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 90 bp | GGTGACGTTCAGCAGCCTGGAGGCCACCTCTGGTATGCCGTTTCTTaGTCTGCACGAGAACATACTGCAGCAATCAGCCTGCAGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GDVQQPGGHLWYAVS*SAREHTAAISLQKL Trigger: CAACTTCTGCAGGCTGATTGCTGCAGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCTCCAGGCTGCTGAACGTCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 90 bp | CTCCTCATCCTGTTTGGAAAACTCGGGAGCGCTGATTTTGTTCACTaGCATGACCACAGCAAGGACCTCCTTGCCTGCCACGATCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLILFGKLGSADFVH*HDHSKDLLACHDRD Trigger: GTCCCGATCGTGGCAGGCAAGGAGGTCCTTGCTGTGGTCATGGCAGTGAACAAAATCAGCGCTCCCGAGTTTTCCAAACAGGATGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 90 bp | GTGCTCCGTAATGGGGAAGTCGCTGAAACAGAACTCGTACAGGTCTaGTGTTCTCGGGTCCGGCAAGTCCTCCTTCAATATGGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLRNGEVAETELVQV*CSRVRQVLLQYGQE Trigger: CTCCTGGCCATATTGAAGGAGGACTTGCCGGACCCGAGAACAGCAGACCTGTACGAGTTCTGTTTCAGCGACTTCCCCATTACGGAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 90 bp | AACTTCTCTGTCAGGGGCCACGAGGTTGTCCTCAAACTTAGAAGTTaGGGTGACGTTCAGCAGCCTGGAGGCCACCTCTGGTATGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: NFSVRGHEVVLKLRS*GDVQQPGGHLWYAV Trigger: AACGGCATACCAGAGGTGGCCTCCAGGCTGCTGAACGTCACCCCAACTTCTAAGTTTGAGGACAACCTCGTGGCCCCTGACAGAGAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGACAGCAAGGACCTCCTaGCCTGCCACGATCGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GLFLFCHFLVTGQNSIKETARTS*PATIGT Trigger: AGTCCCGATCGTGGCAGGCAAGGAGGTCCTTGCTGT...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTATCAGCCTGCAGAAGTaGAGCGAGCCTCTGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSAMDNLWVVTWQNLWGSISLQK*SEPLQC Trigger: GCACTGCAGAGGCTCGCTCAACTTCTGCAGGCTGAT...AGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS CCA 90 bp | AAACTTAGAAGTTGGGGTGACGTTCAGCAGCCTGGAGGCCACCTCTaGTATGCCGTTTCTTGCTCTGCACGAGAACATACTGCAGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: KLRSWGDVQQPGGHL*YAVSCSAREHTAAI Trigger: GATTGCTGCAGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCTCCAGGCTGCTGAACGTCACCCCAACTTCTAAGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGTCAGGGGCCACGAGGTaGTCCTCAAACTTAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLFLFCHFLVTGQNSIKESGATR*SSNLEV Trigger: AACTTCTAAGTTTGAGGACAACCTCGTGGCCCCTGA...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTAAGTCCCATGAAGCCTaGCAAGTGGAGATGTGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RSAMDNLWVVTWQNLWGSKSHEA*QVEMWT Trigger: AGTCCACATCTCCACTTGCAAGGCTTCATGGGACTT...AGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | GGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCAGAGTGCCAGGTCAGTaGCTATTATTGCAACCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GSHMAESLGLFLFCHFLVRVPGQ*LLLQPR Trigger: TCGAGGTTGCAATAATAGCAACTGACCTGGCACTCT...GACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS GCA 90 bp | AATGGAGTAGCGATCGCAGTTCAGGTACGTCCTGATGGTGTACAGTaGCTTGTGAAACTGTCGCTCAACATCAGTGAGCTCTTCGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: NGVAIAVQVRPDGVQ*LVKLSLNISELFEY Trigger: GTATTCGAAGAGCTCACTGATGTTGAGCGACAGTTTCACAAGGCACTGTACACCATCAGGACGTACCTGAACTGCGATCGCTACTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGGGTTTCTTCTTCACTTaGCATCTGCTCGCAGGTATC | + |
|
Preference number: 5 (lower is better) Translates to: GLFLFCHFLVTGQNSIKEGFFFT*HLLAGI Trigger: GATACCTGCGAGCAGATGCAAAGTGAAGAAGAAACC...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | TCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGGCTCCATGTTTTGGACTTTTaGTCTTCGGCGCTGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSSVTSWSLDRTQSRRLHVLDF*SSALPP Trigger: AGGAGGCAGCGCCGAAGACAAAAAGTCCAAAACATG...GAGCCTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS TCA 90 bp | AAACTGTCGCTCAACATCAGTGAGCTCTTCGAATACTTTATTGGCTaGCCACATAAGGATCTGGCTTCTCCGGGACTCCACACTGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: KLSLNISELFEYFIG*PHKDLASPGLHTVQ Trigger: CTGTACAGTGTGGAGTCCCGGAGAAGCCAGATCCTTATGTGGTCAGCCAATAAAGTATTCGAAGAGCTCACTGATGTTGAGCGACAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | GAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAACGATGTCTTCTTTCTaGTTGACAATAGGCAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ESLGLFLFCHFLVTGQNSTMSSF*LTIGRD Trigger: GTCCCTGCCTATTGTCAACAAGAAAGAAGACATCGT...TGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | CAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTACCTCTACAGGGACTTaGAATTTCTCCACCACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QNLWGSSSSVTSWSLDRTTSTGT*NFSTTF Trigger: AAACGTGGTGGAGAAATTCAAAGTCCCTGTAGAGGT...AGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | CTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTGTTTCAAACTGCCGCTaGTTTAGATTCTGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LWVVTWQNLWGSSSSVTSVSNCR*FRFWKM Trigger: CATCTTCCAGAATCTAAACAAGCGGCAGTTTGAAAC...AGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | AGGTCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCACCCGTAGTTTCTaGTCAAAATACTCTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSAMDNLWVVTWQNLWGSSTRSF*SKYSLA Trigger: TGCCAAAGAGTATTTTGACAAGAAACTACGGGTGGA...AGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | TCAGCAATGGATAATCTGTGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCATGTCTTCTTTCTTGTaGACAATAGGCAGGGACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SAMDNLWVVTWQNLWGSSMSSFL*TIGRDK Trigger: CTTGTCCCTGCCTATTGTCAACAAGAAAGAAGACAT...GGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCACAGATTATCCATTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | GTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGTCGGAGGTTACGTATTaGATGGTTTCTTCTTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: VTWQNLWGSSSSVTSWSLSEVTY*MVSSSL Trigger: AAGTGAAGAAGAAACCATCAAATACGTAACCTCCGA...CAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | TGGGTAGTCACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGAAATGGCTGTTCTTTTaGACATCTGAGACATTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WVVTWQNLWGSSSSVTSWKWLFF*TSETLR Trigger: CCTTAATGTCTCAGATGTCAAAAAGAACAGCCATTT...CCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGTGACTACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | GAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCATCTTCGAATACTTTATaGGCTGACCACATAAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ESLGLFLFCHFLVTGQNSSSNTL*ADHIRI Trigger: GATCCTTATGTGGTCAGCCAATAAAGTATTCGAAGA...TGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | ACATGGCAGAATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACGGTATCAACGATCTTTaGAAACATGGTTCTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TWQNLWGSSSSVTSWSLDGINDL*KHGSLL Trigger: AAGAAGAGAACCATGTTTCAAAAGATCGTTGATACC...GTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATTCTGCCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | GGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATCAAGGAGAACATTAAGCATGTTTaGGACTTTTTGTCTTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GLFLFCHFLVTGQNSIKENIKHV*DFLSSA Trigger: CGCCGAAGACAAAAAGTCCAAAACATGCTTAATGTT...CTCCTTGATTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS TCA 90 bp | TGGCTGTTCTTTTTGACATCTGAGACATTAAGGGCTTTCTTCACATaGGCGACCCAGCCAACTATCCCAATGTCCAACGGAAATACAACT | + |
|
Preference number: 5 (lower is better) Translates to: WLFFLTSETLRAFFT*ATQPTIPMSNGNTT Trigger: AGTTGTATTTCCGTTGGACATTGGGATAGTTGGCTGGGTCGCTCATGTGAAGAAAGCCCTTAATGTCTCAGATGTCAAAAAGAACAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS TCA 90 bp | ATTTCCATTCCACCCTGTTATTCTGAAGGCCGTTCAGCATGGGTGTaGTCTCTCCATGAAACCGAGAGAACTCCTTATATACGAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ISIPPCYSEGRSAWV*SLHETERTPYIRKY Trigger: GTACTTTCGTATATAAGGAGTTCTCTCGGTTTCATGGAGAGATCACACCCATGCTGAACGGCCTTCAGAATAACAGGGTGGAATGGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 90 bp | GCCAGTCTCATCTACCGGTCCTTTCTGAAATGTGAAGTACTCATCTaGAGGGGCATTCAGCATGTTACAGATAAATCCATTTTCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASLIYRSFLKCEVLI*RGIQHVTDKSIFCN Trigger: GTTGCAGAAAATGGATTTATCTGTAACATGCTGAATGCCCCTGCAGATGAGTACTTCACATTTCAGAAAGGACCGGTAGATGAGACTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 90 bp | TGGAGTCTTTGGTCCTTTATAAGGCTCAACTTCTCCAAGCTTGATTaGCCACTCATCGTAAAATTCCTTCTCCTTGGTCATGTCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WSLWSFIRLNFSKLD*PLIVKFLLLGHVQK Trigger: CTTCTGGACATGACCAAGGAGAAGGAATTTTACGATGAGTGGCCAATCAAGCTTGGAGAAGTTGAGCCTTATAAAGGACCAAAGACTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 90 bp | CATGGTTCTCTTCTTGAAATAGAGTGCCAGGTCAGTTGCTATTATTaGAACCTCGAACAAATGGATCACCGTTTCAAACTGCCGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HGSLLEIECQVSCYY*NLEQMDHRFKLPLV Trigger: AACAAGCGGCAGTTTGAAACGGTGATCCATTTGTTCGAGGTTGCAATAATAGCAACTGACCTGGCACTCTATTTCAAGAAGAGAACCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | AATCTCTGGGGCTCTTCCTCTTCTGTCACTTCTTGGTCACTGGACAGAACTCAATTGTCAAAATACTCTTaGGCAAAACAAGGGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NLWGSSSSVTSWSLDRTQLSKYS*AKQGFF Trigger: GAAGAACCCTTGTTTTGCCAAAGAGTATTTTGACAA...TTGAGTTCTGTCCAGTGACCAAGAAGTGACAGAAGAGGAAGAGCCCCAGAGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS CCA 90 bp | ATCGATGATTTTATAGAAGATGATTTCCCTGCCATCTGGAGTCTTTaGTCCTTTATAAGGCTCAACTTCTCCAAGCTTGATTGGCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: IDDFIEDDFPAIWSL*SFIRLNFSKLDWPL Trigger: GAGTGGCCAATCAAGCTTGGAGAAGTTGAGCCTTATAAAGGACCAAAGACTCCAGATGGCAGGGAAATCATCTTCTATAAAATCATCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 90 bp | TCGAACAAATGGATCACCGTTTCAAACTGCCGCTTGTTTAGATTCTaGAAGATGTTTAAACTCTCATCCTGCAAGAGAGTCTTGCTATAT | + |
|
Preference number: 5 (lower is better) Translates to: SNKWITVSNCRLFRF*KMFKLSSCKRVLLY Trigger: ATATAGCAAGACTCTCTTGCAGGATGAGAGTTTAAACATCTTCCAGAATCTAAACAAGCGGCAGTTTGAAACGGTGATCCATTTGTTCGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS-3UTR CAA 90 bp | TTTGTTTTTACTAAACTTTATTTAGCTCACAGGGTTTCCAGGTCAGCAATGGATGGTCAGTTGCTATTATaGCAACCTCGAACAAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: FVFTKLYLAHRVSRSAMDGQLLL*QPRTNG Trigger: TCCATTTGTTCGAGGTTGCAATAATAGCAACTGACC...ATCCATTGCTGACCTGGAAACCCTGTGAGCTAAATAAAGTTTAGTAAAAACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | ATCTGCTCCGCGCTTCCGGCCTCGTCCTGCATACACTaGAGTAGCTCCAGGCACACGGCCGACTCCTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: ICSALPASSCIH*SSSRHTADSST Trigger: GGTGGAGGAGTCGGCCGTGTGCCTGGAGCTACTGCAGTGTATGCAGGACGAGGCCGGAAGCGCGGAGCAGAT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | GCAATCAGCCTGCAGAAGTTGAGCGAGCCTCTGCAGTaGCCGGTGAGCCATCTGCTCCGCGCTTCCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: AISLQKLSEPLQ*PVSHLLRASGL Trigger: GAGGCCGGAAGCGCGGAGCAGATGGCTCACCGGGCACTGCAGAGGCTCGCTCAACTTCTGCAGGCTGATTGC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 72 bp | GTCAGGGGCCACGAGGTTGTCCTCAAACTTAGAAGTTaGGGTGACGTTCAGCAGCCTGGAGGCCACCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VRGHEVVLKLRS*GDVQQPGGHLW Trigger: CCAGAGGTGGCCTCCAGGCTGCTGAACGTCACCCCAACTTCTAAGTTTGAGGACAACCTCGTGGCCCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 90 bp | TCTTGCTCTGCACGAGAACATACTGCAGCAATCAGCCTGCAGAAGTaGAGCGAGCCTCTGCAGTGCCCGGTGAGCCATCTGCTCCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCSAREHTAAISLQK*SEPLQCPVSHLLRA Trigger: AGCGCGGAGCAGATGGCTCACCGGGCACTGCAGAGGCTCGCTCAACTTCTGCAGGCTGATTGCTGCAGTATGTTCTCGTGCAGAGCAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 72 bp | TCCACCTGTGTCATCTCAGGGAGCGACAAGCCGGTCTaGACCCCTGCATGGCTGTTTTTGAAGATCACCCCC | + |
|
Preference number: 6 (lower is better) Translates to: STCVISGSDKPV*TPAWLFLKITP Trigger: GGGGGTGATCTTCAAAAACAGCCATGCAGGGGTCCAGACCGGCTTGTCGCTCCCTGAGATGACACAGGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | GCACGAGAACATACTGCAGCAATCAGCCTGCAGAAGTaGAGCGAGCCTCTGCAGTGCCCGGTGAGCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: AREHTAAISLQK*SEPLQCPVSHL Trigger: CAGATGGCTCACCGGGCACTGCAGAGGCTCGCTCAACTTCTGCAGGCTGATTGCTGCAGTATGTTCTCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | CAGCAGCCTGGAGGCCACCTCTGGTATGCCGTTTCTTaGTCTGCACGAGAACATACTGCAGCAATCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QQPGGHLWYAVS*SAREHTAAISL Trigger: CAGGCTGATTGCTGCAGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCTCCAGGCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | GCCTGGAGGCCACCTCTGGTATGCCGTTTCTTGCTCTaGACGAGAACATACTGCAGCAATCAGCCTGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AWRPPLVCRFLL*TRTYCSNQPAE Trigger: TTCTGCAGGCTGATTGCTGCAGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCTCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 72 bp | AGTTGGGGTGACGTTCAGCAGCCTGGAGGCCACCTCTaGTATGCCGTTTCTTGCTCTGCACGAGAACATACT | + |
|
Preference number: 6 (lower is better) Translates to: SWGDVQQPGGHL*YAVSCSAREHT Trigger: AGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCTCCAGGCTGCTGAACGTCACCCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 72 bp | TCTGGCTTCTCCGGGACTCCACACTGTACAGGTAACTaGTGTGCTGCAGCCTTAGTGCGACAGCAACAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGFSGTPHCTGN*CAAALVRQQQS Trigger: GCTTTGTTGCTGTCGCACTAAGGCTGCAGCACACCAGTTACCTGTACAGTGTGGAGTCCCGGAGAAGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | TCAGCAGCCTGGAGGCCACCTCTGGTATGCCGTTTCTaGCTCTGCACGAGAACATACTGCAGCAATCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAAWRPPLVCRF*LCTRTYCSNQP Trigger: AGGCTGATTGCTGCAGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAGAGGTGGCCTCCAGGCTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | CTGTTTGGAAAACTCGGGAGCGCTGATTTTGTTCACTaGCATGACCACAGCAAGGACCTCCTTGCCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LFGKLGSADFVH*HDHSKDLLACH Trigger: GTGGCAGGCAAGGAGGTCCTTGCTGTGGTCATGGCAGTGAACAAAATCAGCGCTCCCGAGTTTTCCAAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | CTGGTATGCCGTTTCTTGCTCTGCACGAGAACATACTaGAGCAATCAGCCTGCAGAAGTTGAGCGAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVCRFLLCTRTY*SNQPAEVERAS Trigger: AGAGGCTCGCTCAACTTCTGCAGGCTGATTGCTGCAGTATGTTCTCGTGCAGAGCAAGAAACGGCATACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | GCGATCGCAGTTCAGGTACGTCCTGATGGTGTACAGTaGCTTGTGAAACTGTCGCTCAACATCAGTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AIAVQVRPDGVQ*LVKLSLNISEL Trigger: GAGCTCACTGATGTTGAGCGACAGTTTCACAAGGCACTGTACACCATCAGGACGTACCTGAACTGCGATCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 90 bp | CCAATGTCCAACGGAAATACAACTTCTCTGTCAGGGGCCACGAGGTaGTCCTCAAACTTAGAAGTTGGGGTGACGTTCAGCAGCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PMSNGNTTSLSGATR*SSNLEVGVTFSSLE Trigger: CTCCAGGCTGCTGAACGTCACCCCAACTTCTAAGTTTGAGGACAACCTCGTGGCCCCTGACAGAGAAGTTGTATTTCCGTTGGACATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS TCA 72 bp | GACCAATGGAGTAGCGATCGCAGTTCAGGTACGTCCTaGTGGTGTACAGTGCCTTGTGAAACTGTCGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: DQWSSDRSSGTS*WCTVPCETVAQ Trigger: TTGAGCGACAGTTTCACAAGGCACTGTACACCATCAGGACGTACCTGAACTGCGATCGCTACTCCATTGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | AATGGGGAAGTCGCTGAAACAGAACTCGTACAGGTCTaGTGTTCTCGGGTCCGGCAAGTCCTCCTTCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: NGEVAETELVQV*CSRVRQVLLQY Trigger: ATATTGAAGGAGGACTTGCCGGACCCGAGAACAGCAGACCTGTACGAGTTCTGTTTCAGCGACTTCCCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 72 bp | GCAACGTATGTTGGCAATCCACTAACAAGCGTCCAGTaGTCTGCTGGAGGTGACGGAATCACGTTGATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATYVGNPLTSVQ*SAGGDGITLIS Trigger: AGAGATCAACGTGATTCCGTCACCTCCAGCAGACCACTGGACGCTTGTTAGTGGATTGCCAACATACGTTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | TCCTCATCCTGTTTGGAAAACTCGGGAGCGCTGATTTaGTTCACTGCCATGACCACAGCAAGGACCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSSCLENSGALI*FTAMTTARTSL Trigger: CAAGGAGGTCCTTGCTGTGGTCATGGCAGTGAACAAAATCAGCGCTCCCGAGTTTTCCAAACAGGATGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS TCA 72 bp | CCCAGCCAGTCTCATCTACCGGTCCTTTCTGAAATGTaGAGTACTCATCTGCAGGGGCATTCAGCATGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: PSQSHLPVLSEM*STHLQGHSACY Trigger: GTAACATGCTGAATGCCCCTGCAGATGAGTACTTCACATTTCAGAAAGGACCGGTAGATGAGACTGGCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | AACGGAAATACAACTTCTCTGTCAGGGGCCACGAGGTaGTCCTCAAACTTAGAAGTTGGGGTGACGTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NGNTTSLSGATR*SSNLEVGVTFS Trigger: GCTGAACGTCACCCCAACTTCTAAGTTTGAGGACAACCTCGTGGCCCCTGACAGAGAAGTTGTATTTCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS TCA 72 bp | CTCAACATCAGTGAGCTCTTCGAATACTTTATTGGCTaGCCACATAAGGATCTGGCTTCTCCGGGACTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LNISELFEYFIG*PHKDLASPGLH Trigger: GTGGAGTCCCGGAGAAGCCAGATCCTTATGTGGTCAGCCAATAAAGTATTCGAAGAGCTCACTGATGTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS TCA 72 bp | CAGTTCAGGTACGTCCTGATGGTGTACAGTGCCTTGTaGAACTGTCGCTCAACATCAGTGAGCTCTTCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: QFRYVLMVYSAL*NCRSTSVSSSN Trigger: ATTCGAAGAGCTCACTGATGTTGAGCGACAGTTTCACAAGGCACTGTACACCATCAGGACGTACCTGAACTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 72 bp | GTGCCTCCACCCGTAGTTTCTTGTCAAAATACTCTTTaGCAAAACAAGGGTTCTTCTCCAGGTAGCGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPPPVVSCQNTL*QNKGSSPGSAP Trigger: TGGAGCGCTACCTGGAGAAGAACCCTTGTTTTGCCAAAGAGTATTTTGACAAGAAACTACGGGTGGAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | TGTCGCTCAACATCAGTGAGCTCTTCGAATACTTTATaGGCTGACCACATAAGGATCTGGCTTCTCCGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CRSTSVSSSNTL*ADHIRIWLLRD Trigger: GTCCCGGAGAAGCCAGATCCTTATGTGGTCAGCCAATAAAGTATTCGAAGAGCTCACTGATGTTGAGCGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 90 bp | ATGGCCATGATGACTTCCTTTTTGGTCGGGTCGGAGGTTACGTATTaGATGGTTTCTTCTTCACTTTGCATCTGCTCGCAGGTATCAACG | + |
|
Preference number: 6 (lower is better) Translates to: MAMMTSFLVGSEVTY*MVSSSLCICSQVST Trigger: CGTTGATACCTGCGAGCAGATGCAAAGTGAAGAAGAAACCATCAAATACGTAACCTCCGACCCGACCAAAAAGGAAGTCATCATGGCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS TCA 72 bp | CCACCCTGTTATTCTGAAGGCCGTTCAGCATGGGTGTaGTCTCTCCATGAAACCGAGAGAACTCCTTATATA | + |
|
Preference number: 6 (lower is better) Translates to: PPCYSEGRSAWV*SLHETERTPYI Trigger: TATATAAGGAGTTCTCTCGGTTTCATGGAGAGATCACACCCATGCTGAACGGCCTTCAGAATAACAGGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | CAGGCAGTCATCATCATGGCCATGATGACTTCCTTTTaGGTCGGGTCGGAGGTTACGTATTTGATGGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: QAVIIMAMMTSF*VGSEVTYLMVS Trigger: AGAAACCATCAAATACGTAACCTCCGACCCGACCAAAAAGGAAGTCATCATGGCCATGATGATGACTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS TCA 72 bp | TTTTTGACATCTGAGACATTAAGGGCTTTCTTCACATaGGCGACCCAGCCAACTATCCCAATGTCCAACGGA | + |
|
Preference number: 6 (lower is better) Translates to: FLTSETLRAFFT*ATQPTIPMSNG Trigger: TCCGTTGGACATTGGGATAGTTGGCTGGGTCGCTCATGTGAAGAAAGCCCTTAATGTCTCAGATGTCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | GGTGATGTCGCTCTAAAATGGAAGTCCCATGAAGCCTaGCAAGTGGAGATGTGGACTTCATTTGGTACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GDVALKWKSHEA*QVEMWTSFGTS Trigger: ACTTGTACCAAATGAAGTCCACATCTCCACTTGCAAGGCTTCATGGGACTTCCATTTTAGAGCGACATCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | ATGACTTCCTTTTTGGTCGGGTCGGAGGTTACGTATTaGATGGTTTCTTCTTCACTTTGCATCTGCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MTSFLVGSEVTY*MVSSSLCICSQ Trigger: CTGCGAGCAGATGCAAAGTGAAGAAGAAACCATCAAATACGTAACCTCCGACCCGACCAAAAAGGAAGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | TTTTTGCTTCTGTCCATCATAGGAATTGGTTGCTGCTaGAGCACTGTTCTTTCCAGATCTCCTTGTTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FLLLSIIGIGCC*STVLSRSPCSQ Trigger: TTGGGAACAAGGAGATCTGGAAAGAACAGTGCTGCAGCAGCAACCAATTCCTATGATGGACAGAAGCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025956.13 |
||
| CDS CCA 72 bp | CATGTTACAGATAAATCCATTTTCTGCAACGTATGTTaGCAATCCACTAACAAGCGTCCAGTGGTCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: HVTDKSIFCNVC*QSTNKRPVVCW Trigger: CCAGCAGACCACTGGACGCTTGTTAGTGGATTGCCAACATACGTTGCAGAAAATGGATTTATCTGTAACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 72 bp | GCCAGGTCAGTTGCTATTATTGCAACCTCGAACAAATaGATCACCGTTTCAAACTGCCGCTTGTTTAGATTC | + |
|
Preference number: 6 (lower is better) Translates to: ARSVAIIATSNK*ITVSNCRLFRF Trigger: GAATCTAAACAAGCGGCAGTTTGAAACGGTGATCCATTTGTTCGAGGTTGCAATAATAGCAACTGACCTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 90 bp | GGTTTCTTCTTCACTTTGCATCTGCTCGCAGGTATCAACGATCTTTaGAAACATGGTTCTCTTCTTGAAATAGAGTGCCAGGTCAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: GFFFTLHLLAGINDL*KHGSLLEIECQVSC Trigger: GCAACTGACCTGGCACTCTATTTCAAGAAGAGAACCATGTTTCAAAAGATCGTTGATACCTGCGAGCAGATGCAAAGTGAAGAAGAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 90 bp | TTTGGTCGGGTCGGAGGTTACGTATTTGATGGTTTCTTCTTCACTTaGCATCTGCTCGCAGGTATCAACGATCTTTTGAAACATGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FGRVGGYVFDGFFFT*HLLAGINDLLKHGS Trigger: AGAACCATGTTTCAAAAGATCGTTGATACCTGCGAGCAGATGCAAAGTGAAGAAGAAACCATCAAATACGTAACCTCCGACCCGACCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | CATGGTTCTCTTCTTGAAATAGAGTGCCAGGTCAGTTaGTATTATTGCAACCTCGAACAAATGGATCACCGT | + |
|
Preference number: 6 (lower is better) Translates to: HGSLLEIECQVS*YYCNLEQMDHR Trigger: ACGGTGATCCATTTGTTCGAGGTTGCAATAATAGCAACTGACCTGGCACTCTATTTCAAGAAGAGAACCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 72 bp | TGGTCCTTTATAAGGCTCAACTTCTCCAAGCTTGATTaGCCACTCATCGTAAAATTCCTTCTCCTTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WSFIRLNFSKLD*PLIVKFLLLGH Trigger: ATGACCAAGGAGAAGGAATTTTACGATGAGTGGCCAATCAAGCTTGGAGAAGTTGAGCCTTATAAAGGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | GTGTACATCCACCTTGTAAGAACCTCTACAGGGACTTaGAATTTCTCCACCACGTTTATCTCCAAAAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VYIHLVRTSTGT*NFSTTFISKNS Trigger: GCTGTTTTTGGAGATAAACGTGGTGGAGAAATTCAAAGTCCCTGTAGAGGTTCTTACAAGGTGGATGTACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | ATCTACCGGTCCTTTCTGAAATGTGAAGTACTCATCTaGAGGGGCATTCAGCATGTTACAGATAAATCCATT | + |
|
Preference number: 6 (lower is better) Translates to: IYRSFLKCEVLI*RGIQHVTDKSI Trigger: AATGGATTTATCTGTAACATGCTGAATGCCCCTGCAGATGAGTACTTCACATTTCAGAAAGGACCGGTAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | GGAAGATGTTTAAACTCTCATCCTGCAAGAGAGTCTTaGTATATTCCAGGTGATGTCGCTCTAAAATGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GRCLNSHPARES*YIPGDVALKWK Trigger: CTTCCATTTTAGAGCGACATCACCTGGAATATAGCAAGACTCTCTTGCAGGATGAGAGTTTAAACATCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS GCA 72 bp | CTTCTTGAAATAGAGTGCCAGGTCAGTTGCTATTATTaGAACCTCGAACAAATGGATCACCGTTTCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: LLEIECQVSCYY*NLEQMDHRFKL Trigger: CAGTTTGAAACGGTGATCCATTTGTTCGAGGTTGCAATAATAGCAACTGACCTGGCACTCTATTTCAAGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | TTCACTTTGCATCTGCTCGCAGGTATCAACGATCTTTaGAAACATGGTTCTCTTCTTGAAATAGAGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FTLHLLAGINDL*KHGSLLEIECQ Trigger: CTGGCACTCTATTTCAAGAAGAGAACCATGTTTCAAAAGATCGTTGATACCTGCGAGCAGATGCAAAGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 90 bp | ATTATTGCAACCTCGAACAAATGGATCACCGTTTCAAACTGCCGCTaGTTTAGATTCTGGAAGATGTTTAAACTCTCATCCTGCAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: IIATSNKWITVSNCR*FRFWKMFKLSSCKR Trigger: TCTCTTGCAGGATGAGAGTTTAAACATCTTCCAGAATCTAAACAAGCGGCAGTTTGAAACGGTGATCCATTTGTTCGAGGTTGCAATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CCA 72 bp | TTTATAGAAGATGATTTCCCTGCCATCTGGAGTCTTTaGTCCTTTATAAGGCTCAACTTCTCCAAGCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: FIEDDFPAIWSL*SFIRLNFSKLD Trigger: ATCAAGCTTGGAGAAGTTGAGCCTTATAAAGGACCAAAGACTCCAGATGGCAGGGAAATCATCTTCTATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||
| CDS CAA 72 bp | ACTGCTAGCAGATTCCTGGTGACATATCCAGTTTGCTaGTCCATAAAGTCAGAAAAATGGCTGTTCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TASRFLVTYPVC*SIKSEKWLFFL Trigger: CAAAAAGAACAGCCATTTTTCTGACTTTATGGACAAGCAAACTGGATATGTCACCAGGAATCTGCTAGCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025956.13 ENSMUST00000112329.3 |
||