Pregenerated sensors for PDE4D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021699Ensembl transcript IDs: ENSMUST00000074103.12, ENSMUST00000079975.11, ENSMUST00000119507.8, ENSMUST00000119672.8, ENSMUST00000120664.8, ENSMUST00000120671.8, ENSMUST00000122041.8, ENSMUST00000135275.8, ENSMUST00000153234.8, ENSMUST00000155459.2, ENSMUST00000177907.8
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTTCAGGCTGGCTTTCCTCTTCCGCTACAGCTTCCTCCTCAACCTaGTCGTCAAGGGGAATTTCAGTGGACTCTGAGTCTTGGGTGCAC | + |
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Preference number: 1 (lower is better) Translates to: VSGWLSSSATASSST*SSRGISVDSESWVH Trigger: GTGCACCCAAGACTCAGAGTCCACTGAAATTCCCCTTGACGAGCAGGTTGAGGAGGAAGCTGTAGCGGAAGAGGAAAGCCAGCCTGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR CCA 90 bp | AGCGTCTGGGCAGCTGGATGGGCCACAGGCTCCCTTGAAAACAGTTaGAGTCAATTTTATCCGCTTTGTCAGCTCTGCCAAGCTGACGTC | + |
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Preference number: 1 (lower is better) Translates to: SVWAAGWATGSLENS*SQFYPLCQLCQADV Trigger: GACGTCAGCTTGGCAGAGCTGACAAAGCGGATAAAATTGACTCCAACTGTTTTCAAGGGAGCCTGTGGCCCATCCAGCTGCCCAGACGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR TCA 90 bp | GGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGTTCATaGCGCTCTCATTGCTTCCTCTGTGAGTTCACACGCGTCATCAAA | + |
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Preference number: 1 (lower is better) Translates to: GSSSSRGQIQAVSCS*RSHCFLCEFTRVIK Trigger: TTTGATGACGCGTGTGAACTCACAGAGGAAGCAATGAGAGCGTCATGAACAGGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR CCA 90 bp | AGTGGGACAGCCTTTATGCTGTTACGTATCAGGACAGCAGTCATCTaGGACGCAAGTTTCAGGCTGGCTTTCCTCTTCCGCTACAGCTTC | + |
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Preference number: 1 (lower is better) Translates to: SGTAFMLLRIRTAVI*DASFRLAFLFRYSF Trigger: GAAGCTGTAGCGGAAGAGGAAAGCCAGCCTGAAACTTGCGTCCCAGATGACTGCTGTCCTGATACGTAACAGCATAAAGGCTGTCCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR CCA 90 bp | TCACGGAGGTCTCGCTTCCCTGGGCAGTTCAAACAACAGCTGTCCTaGTATTTGTCGATAGAGACAGCTGACAGTCTTAAGACCTGCCTA | + |
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Preference number: 1 (lower is better) Translates to: SRRSRFPGQFKQQLS*YLSIETADSLKTCL Trigger: TAGGCAGGTCTTAAGACTGTCAGCTGTCTCTATCGACAAATACCAGGACAGCTGTTGTTTGAACTGCCCAGGGAAGCGAGACCTCCGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR TCA 90 bp | AAACAGTTGGAGTCAATTTTATCCGCTTTGTCAGCTCTGCCAAGCTaGCGTCACGTCCACGTCCTGTACGTGAAGACATCTCTCTTCTCC | + |
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Preference number: 1 (lower is better) Translates to: KQLESILSALSALPS*RHVHVLYVKTSLFS Trigger: GGAGAAGAGAGATGTCTTCACGTACAGGACGTGGACGTGACGTCAGCTTGGCAGAGCTGACAAAGCGGATAAAATTGACTCCAACTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR CCA 90 bp | TTTTCAGTGTCTGACTCGCAGTCTTCCTCCAAGGTTAGTTCAAACTaGAATTTTTCAGTCTGTCCCTGCCGGCCCTCCTCTTGGTCATCA | + |
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Preference number: 1 (lower is better) Translates to: FSVSDSQSSSKVSSN*NFSVCPCRPSSWSS Trigger: TGATGACCAAGAGGAGGGCCGGCAGGGACAGACTGAAAAATTCCAGTTTGAACTAACCTTGGAGGAAGACTGCGAGTCAGACACTGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR TCA 90 bp | GATCCAAGCTGTGTCCTGTTCATGACGCTCTCATTGCTTCCTCTGTaGGTTCACACGCGTCATCAAATGCCTTCTTTCTTCTTAACACGT | + |
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Preference number: 1 (lower is better) Translates to: DPSCVLFMTLSLLPL*VHTRHQMPSFFLTR Trigger: ACGTGTTAAGAAGAAAGAAGGCATTTGATGACGCGTGTGAACTCACAGAGGAAGCAATGAGAGCGTCATGAACAGGACACAGCTTGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR CCA 90 bp | GGTATCATCCACTCTCCTTTAGTGTGTCTGCAGCAGTCCTTCCTATaGGACAAGCTGATGGAGCAAGAAGAATCAATAGCAAAGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: GIIHSPLVCLQQSFL*DKLMEQEESIAKST Trigger: TGTGGACTTTGCTATTGATTCTTCTTGCTCCATCAGCTTGTCCCATAGGAAGGACTGCTGCAGACACACTAAAGGAGAGTGGATGATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR TCA 90 bp | GGTCAGTTTTGTTCAACAAACGTCCTGGCAGATGACAGTGAGGTGTaGCCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTT | + |
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Preference number: 1 (lower is better) Translates to: GQFCSTNVLADDSEV*PWLWHVTCTLETIF Trigger: AAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACCTCACTGTCATCTGCCAGGACGTTTGTTGAACAAAACTGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGACTCCCCTGGCAGGTGGAGGAGTGGAAGTAAAGGAGGAGCCAATGGACGGCCACAGGCTCCCTTaGAAACAGTTGGAGTCAATT | + |
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Preference number: 2 (lower is better) Translates to: EQTPLAGGGVEVKEEPMDGHRLP*KQLESI Trigger: AATTGACTCCAACTGTTTTCAAGGGAGCCTGTGGCC...GTCCATTGGCTCCTCCTTTACTTCCACTCCTCCACCTGCCAGGGGAGTCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR GCA 90 bp | GTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCCCGCTTTGTCAGCTCTaGCAAGCTGACGTCACGTCC | + |
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Preference number: 2 (lower is better) Translates to: VCNFCGSSSSRGQIQAVSPLCQL*QADVTS Trigger: GGACGTGACGTCAGCTTGGCAGAGCTGACAAAGCGG...GGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTTCAGGCTGGCTTTCCTCTTCCGCTACAGCTTCCTCCTCAACCTGCTCGGCCAGCAGGTTCATGTaGTTCGACATGTCTGTCGCC | + |
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Preference number: 2 (lower is better) Translates to: QVSGWLSSSATASSSTCSASRFM*FDMSVA Trigger: GGCGACAGACATGTCGAAGCACATGAACCTGCTGGC...CGAGCAGGTTGAGGAGGAAGCTGTAGCGGAAGAGGAAAGCCAGCCTGAAACTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR CAA 90 bp | CGGTTACCAGACAGCTCTGCTATTCGGAAAACGTGGAGGCCCCACTaGTTCACATCTTCTAGTTCCTTGGCCAGGACATCTTCCTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: RLPDSSAIRKTWRPH*FTSSSSLARTSSCS Trigger: GGAGCAGGAAGATGTCCTGGCCAAGGAACTAGAAGATGTGAACAAGTGGGGCCTCCACGTTTTCCGAATAGCAGAGCTGTCTGGTAACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGTTCATGACGACCAGAAAGGAACCCTaGAATCCGATCTTAGCGTCT | + |
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Preference number: 2 (lower is better) Translates to: LWLILLQGTDPSCVLFMTTRKEP*NPILAS Trigger: AGACGCTAAGATCGGATTGCAGGGTTCCTTTCTGGT...CGTCATGAACAGGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGGTGGGGTGGGTGAGAGAACTGGTTACAATATTCCTGAGCGCCAGACTGAGGTTCAACAAACGTCCTaGCAGATGACAGTGAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: GGGVGERTGYNIPERQTEVQQTS*QMTVRC Trigger: ACACCTCACTGTCATCTGCCAGGACGTTTGTTGAAC...CTCAGTCTGGCGCTCAGGAATATTGTAACCAGTTCTCTCACCCACCCCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR CAA 90 bp | AATCCGATCTTAGCGTCTGGGCAGCTGGATGGGCCACAGGCTCCCTaGAAAACAGTTGGAGTCAATTTTATCCGCTTTGTCAGCTCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: NPILASGQLDGPQAP*KTVGVNFIRFVSSA Trigger: GGCAGAGCTGACAAAGCGGATAAAATTGACTCCAACTGTTTTCAAGGGAGCCTGTGGCCCATCCAGCTGCCCAGACGCTAAGATCGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTTCAGGCTGGCTTTCCTCTTCCGCTACAGCTTCCTCCTCAACCTGCTCGGTCCACATCATGTATTaGACTGGCAAAAATGGCCGC | + |
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Preference number: 2 (lower is better) Translates to: QVSGWLSSSATASSSTCSVHIMY*TGKNGR Trigger: GCGGCCATTTTTGCCAGTGCAATACATGATGTGGAC...CGAGCAGGTTGAGGAGGAAGCTGTAGCGGAAGAGGAAAGCCAGCCTGAAACTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCGGGTGACTACAAGGACAGCATTTGTGAATGCATGTCTCCTGAGACAGGGCAAATGTAGAGAGAGGTaGGTGTGGCTCACTGAACCA | + |
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Preference number: 2 (lower is better) Translates to: VRVTTRTAFVNACLLRQGKCRER*VWLTEP Trigger: TGGTTCAGTGAGCCACACTCACCTCTCTCTACATTT...GCCCTGTCTCAGGAGACATGCATTCACAAATGCTGTCCTTGTAGTCACCCGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTTTATGCTGTTACGTATCAGGACAGCAGTCATCTGGGACGCAAGTTTCAGAATCTCCAAGTCTGTaGACACAGCCTCCAAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: QPLCCYVSGQQSSGTQVSESPSL*TQPPKR Trigger: CCGCTTTGGAGGCTGTGTTCACAGACTTGGAGATTC...TGAAACTTGCGTCCCAGATGACTGCTGTCCTGATACGTAACAGCATAAAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCTTTATGCTGTTACGTATCAGGACAGCAGTCATCTGGGACGCAAGTTTCAGCCAGGACATCTTCCTaGTCCGTTTTAACCCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: QPLCCYVSGQQSSGTQVSARTSS*SVLTPN Trigger: GTTTGGGGTTAAAACGGAGCAGGAAGATGTCCTGGC...TGAAACTTGCGTCCCAGATGACTGCTGTCCTGATACGTAACAGCATAAAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTTTATGCTGTTACGTATCAGGACAGCAGTCATCTGGGACGCAAGTTTCACAAGGGGAATTTCAGTaGACTCTGAGTCTTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: QPLCCYVSGQQSSGTQVSQGEFQ*TLSLGC Trigger: GCACCCAAGACTCAGAGTCCACTGAAATTCCCCTTG...TGAAACTTGCGTCCCAGATGACTGCTGTCCTGATACGTAACAGCATAAAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTTTATGCTGTTACGTATCAGGACAGCAGTCATCTGGGACGCAAGTTTCATTTGACACCCCAGGATaGTCCACATCATGTATTGCA | + |
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Preference number: 2 (lower is better) Translates to: QPLCCYVSGQQSSGTQVSFDTPG*STSCIA Trigger: TGCAATACATGATGTGGACCATCCTGGGGTGTCAAA...TGAAACTTGCGTCCCAGATGACTGCTGTCCTGATACGTAACAGCATAAAGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR-3UTR TCA 90 bp | GACAAGCTGATGGAGCAAGAAGAATCAATAGCAAAGTCCACATGTTACCAGACTACTTCAGCCCTACCCTaGCAACCTGTTTCTTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: DKLMEQEESIAKSTCYQTTSALP*QPVSFS Trigger: GGAAAAAGAAACAGGTTGTCAGGGTAGGGCTGAAGT...AGTCTGGTAACATGTGGACTTTGCTATTGATTCTTCTTGCTCCATCAGCTTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGTTCATTTGTGGCATGTGACATaGACTTTGGAAACAATATTT | + |
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Preference number: 2 (lower is better) Translates to: ISVAHPPPGDRSKLCPVHLWHVT*TLETIF Trigger: AAATATTGTTTCCAAAGTGCATGTCACATGCCACAA...ATGAACAGGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCGGGTGACTACAAGGACAGCATTTGTGAATGCATGTCTCCTGAGACAGGGCGACTGTTTTAGCTACTaGGTATTTATATATCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VRVTTRTAFVNACLLRQGDCFSY*VFIYLP Trigger: TGGGAGATATATAAATACCCAGTAGCTAAAACAGTC...GCCCTGTCTCAGGAGACATGCATTCACAAATGCTGTCCTTGTAGTCACCCGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR TCA 90 bp | GACAAGCTGATGGAGCAAGAAGAATCAATAGCAAAGTCCACATGTTACCAGACTCATGGTTGTGGCATGTaGCATGCACTTTGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: DKLMEQEESIAKSTCYQTHGCGM*HALWKQ Trigger: TTGTTTCCAAAGTGCATGTCACATGCCACAACCATG...AGTCTGGTAACATGTGGACTTTGCTATTGATTCTTCTTGCTCCATCAGCTTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR CAA 90 bp | TGTGGCTCACTGAACCACACTGTTCAGTCATGTTATCAGGAAGACTaGAAATTAGAAAAGTATGCAATTTCTGTGGCTCATCCTCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: CGSLNHTVQSCYQED*KLEKYAISVAHPPP Trigger: TGGAGGAGGATGAGCCACAGAAATTGCATACTTTTCTAATTTCAAGTCTTCCTGATAACATGACTGAACAGTGTGGTTCAGTGAGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGAAAAGTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGTCCCTTGAAAACAGTTaGAGTCAATTTTATCCGCTT | + |
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Preference number: 2 (lower is better) Translates to: LEKYAISVAHPPPGDRSKSLENS*SQFYPL Trigger: AAGCGGATAAAATTGACTCCAACTGTTTTCAAGGGA...CTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATACTTTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR TCA 90 bp | GACAAGCTGATGGAGCAAGAAGAATCAATAGCAAAGTCCACATGTTACCAGACTAGTACTGATCTGTACTaGAAACTTGCAAGTTACTTC | + |
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Preference number: 2 (lower is better) Translates to: DKLMEQEESIAKSTCYQTSTDLY*KLASYF Trigger: GAAGTAACTTGCAAGTTTTCAGTACAGATCAGTACT...AGTCTGGTAACATGTGGACTTTGCTATTGATTCTTCTTGCTCCATCAGCTTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR GCA 72 bp | AGAGCAGCTTCGACACTCAGAACCACTTCCCAGGGCTaGTCCTCACGGAGGTCTCGCTTCCCTGGGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: RAASTLRTTSQG*SSRRSRFPGQF Trigger: GAACTGCCCAGGGAAGCGAGACCTCCGTGAGGAGCAGCCCTGGGAAGTGGTTCTGAGTGTCGAAGCTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR TCA 72 bp | AACACAGCCTCCAAAGCGGGTGTAGAGAGCAGCACGTaGGTGGACTGGACGACGTCTGCAGCATGGATGTTG | + |
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Preference number: 3 (lower is better) Translates to: NTASKAGVESST*VDWTTSAAWML Trigger: CAACATCCATGCTGCAGACGTCGTCCAGTCCACTCACGTGCTGCTCTCTACACCCGCTTTGGAGGCTGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR TCA 72 bp | TCCTCCAGGGGACAGATCCAAGCTGTGTCCTGTTCATaGCGCTCTCATTGCTTCCTCTGTGAGTTCACACGC | + |
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Preference number: 3 (lower is better) Translates to: SSRGQIQAVSCS*RSHCFLCEFTR Trigger: GCGTGTGAACTCACAGAGGAAGCAATGAGAGCGTCATGAACAGGACACAGCTTGGATCTGTCCCCTGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR CAA 90 bp | GCTATTCGGAAAACGTGGAGGCCCCACTTGTTCACATCTTCTAGTTCCTTGGCCTACTCCGACACCTGGTaGCCAGACCGACTCATCTCA | + |
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Preference number: 3 (lower is better) Translates to: AIRKTWRPHLFTSSSSLAYSDTW*PDRLIS Trigger: TGAGATGAGTCGGTCTGGCAACCAGGTGTCGGAGTA...GGCCAAGGAACTAGAAGATGTGAACAAGTGGGGCCTCCACGTTTTCCGAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR GCA 72 bp | CATGATAACAGTCAGAGGCCGGTTACCAGACAGCTCTaGTATTCGGAAAACGTGGAGGCCCCACTTGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: HDNSQRPVTRQL*YSENVEAPLVH Trigger: GTGAACAAGTGGGGCCTCCACGTTTTCCGAATAGCAGAGCTGTCTGGTAACCGGCCTCTGACTGTTATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR CCA 72 bp | GCCTTTATGCTGTTACGTATCAGGACAGCAGTCATCTaGGACGCAAGTTTCAGGCTGGCTTTCCTCTTCCGC | + |
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Preference number: 3 (lower is better) Translates to: AFMLLRIRTAVI*DASFRLAFLFR Trigger: GCGGAAGAGGAAAGCCAGCCTGAAACTTGCGTCCCAGATGACTGCTGTCCTGATACGTAACAGCATAAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR CCA 72 bp | GCAGCTGGATGGGCCACAGGCTCCCTTGAAAACAGTTaGAGTCAATTTTATCCGCTTTGTCAGCTCTGCCAA | + |
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Preference number: 3 (lower is better) Translates to: AAGWATGSLENS*SQFYPLCQLCQ Trigger: TTGGCAGAGCTGACAAAGCGGATAAAATTGACTCCAACTGTTTTCAAGGGAGCCTGTGGCCCATCCAGCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR CCA 72 bp | TCTGACTCGCAGTCTTCCTCCAAGGTTAGTTCAAACTaGAATTTTTCAGTCTGTCCCTGCCGGCCCTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: SDSQSSSKVSSN*NFSVCPCRPSS Trigger: AGAGGAGGGCCGGCAGGGACAGACTGAAAAATTCCAGTTTGAACTAACCTTGGAGGAAGACTGCGAGTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR CCA 72 bp | TGCTCGTCAAGGGGAATTTCAGTGGACTCTGAGTCTTaGGTGCACAGAGTCTTAGAGTCACTGCAGCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: CSSRGISVDSES*VHRVLESLQLV Trigger: CACTAGCTGCAGTGACTCTAAGACTCTGTGCACCCAAGACTCAGAGTCCACTGAAATTCCCCTTGACGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR TCA 72 bp | GAGTCAATTTTATCCGCTTTGTCAGCTCTGCCAAGCTaGCGTCACGTCCACGTCCTGTACGTGAAGACATCT | + |
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Preference number: 3 (lower is better) Translates to: ESILSALSALPS*RHVHVLYVKTS Trigger: AGATGTCTTCACGTACAGGACGTGGACGTGACGTCAGCTTGGCAGAGCTGACAAAGCGGATAAAATTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGAAAAGTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGGGGCCACAGGCTCCCTaGAAAACAGTTGGAGTCAAT | + |
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Preference number: 3 (lower is better) Translates to: LEKYAISVAHPPPGDRSKGPQAP*KTVGVN Trigger: ATTGACTCCAACTGTTTTCAAGGGAGCCTGTGGCCC...CTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATACTTTTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR TCA 72 bp | TGTTCAACAAACGTCCTGGCAGATGACAGTGAGGTGTaGCCATGGTTGTGGCATGTGACATGCACTTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: CSTNVLADDSEV*PWLWHVTCTLE Trigger: TTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACCTCACTGTCATCTGCCAGGACGTTTGTTGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR GCA 72 bp | AACCTGGGGATACATGAATTAGTTAGGCTGGAGCTGTaGATCAACTTCTTGACCCCACTGATCTGCGACATC | + |
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Preference number: 3 (lower is better) Translates to: NLGIHELVRLEL*INFLTPLICDI Trigger: GATGTCGCAGATCAGTGGGGTCAAGAAGTTGATGCACAGCTCCAGCCTAACTAATTCATGTATCCCCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR GCA 72 bp | TCAACCATGGTTTTCAGATCAGCCAGCAGGTTCATGTaGTTCGACATGTCTGTCGCCAGGACAATGTCAATG | + |
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Preference number: 3 (lower is better) Translates to: STMVFRSASRFM*FDMSVARTMSM Trigger: CATTGACATTGTCCTGGCGACAGACATGTCGAAGCACATGAACCTGCTGGCTGATCTGAAAACCATGGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR CCA 72 bp | TCTCGCTTCCCTGGGCAGTTCAAACAACAGCTGTCCTaGTATTTGTCGATAGAGACAGCTGACAGTCTTAAG | + |
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Preference number: 3 (lower is better) Translates to: SRFPGQFKQQLS*YLSIETADSLK Trigger: CTTAAGACTGTCAGCTGTCTCTATCGACAAATACCAGGACAGCTGTTGTTTGAACTGCCCAGGGAAGCGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR CCA 72 bp | CTTAATGTTCTACTGAGGCAGACTCACACAATCCACTaGTTTAGATCCCATCGCATAACGATCCGCCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: LNVLLRQTHTIH*FRSHRITIRLE Trigger: CTCCAGGCGGATCGTTATGCGATGGGATCTAAACCAGTGGATTGTGTGAGTCTGCCTCAGTAGAACATTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| 3UTR-3UTR CAA 90 bp | GGAAAACGTGGAGGCCCCACTTGTTCACATCTTCTAGTTCCTTGGCCAGGACATTATCGAGAAATGTGTTaGAGATGTACTCCGACACCT | + |
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Preference number: 3 (lower is better) Translates to: GKRGGPTCSHLLVPWPGHYREMC*RCTPTP Trigger: AGGTGTCGGAGTACATCTCAAACACATTTCTCGATA...ATGTCCTGGCCAAGGAACTAGAAGATGTGAACAAGTGGGGCCTCCACGTTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
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| 3UTR TCA 72 bp | TGTGTCCTGTTCATGACGCTCTCATTGCTTCCTCTGTaGGTTCACACGCGTCATCAAATGCCTTCTTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CVLFMTLSLLPL*VHTRHQMPSFF Trigger: GAAGAAAGAAGGCATTTGATGACGCGTGTGAACTCACAGAGGAAGCAATGAGAGCGTCATGAACAGGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| 3UTR TCA 72 bp | TGTGCTTCGACATGTCTGTCGCCAGGACAATGTCAATaGCCATTTTCCTTAAAGATTGTCTTTGCTTTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: CASTCLSPGQCQ*PFSLKIVFAFW Trigger: CCAAAAAGCAAAGACAATCTTTAAGGAAAATGGTCATTGACATTGTCCTGGCGACAGACATGTCGAAGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGACGTAATGCACATTAACGTATTACAGAATAAATACTCACTTTGCACACAGAGTTCAAGGTCAGTTTaGTTCAACAAACGTCCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LDVMHINVLQNKYSLCTQSSRSV*FNKRPG Trigger: GCCAGGACGTTTGTTGAACAAAACTGACCTTGAACT...CTGTGTGCAAAGTGAGTATTTATTCTGTAATACGTTAATGTGCATTACGTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | CAAGTTTCAGGCTGGCTTTCCTCTTCCGCTACAGCTTCCTCCTCAACCTGCTCGGGCCTCCTCCCGCCATaGTCGGATGCCCGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QVSGWLSSSATASSSTCSGLLPP*SDARCP Trigger: CGGGCACCGGGCATCCGAGCATGGCGGGAGGAGGCC...CGAGCAGGTTGAGGAGGAAGCTGTAGCGGAAGAGGAAAGCCAGCCTGAAACTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGTTCATGACGCCCGCCATGCTCGGATaGCCGGTGCCCGCACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLILLQGTDPSCVLFMTPAMLG*PVPAHE Trigger: CTCATGTGCGGGCACCGGGCATCCGAGCATGGCGGG...CGTCATGAACAGGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGCCGTACCCCGCCATaGTCGGATGCCCGGTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VCNFCGSSSSRGQIQAVSCRTPP*SDARCP Trigger: CGGGCACCGGGCATCCGAGCATGGCGGGGTACGGCA...GGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGTGGGGTGGGTGAGAGAACTGGTTACAATATTCCTGAGCGCCAGACTGAGCAAAGGGGGCCATCCTaGCGTACCCCGCCATGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GGGVGERTGYNIPERQTEQRGPS*RTPPCS Trigger: CGAGCATGGCGGGGTACGGCAGGATGGCCCCCTTTG...CTCAGTCTGGCGCTCAGGAATATTGTAACCAGTTCTCTCACCCACCCCACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGCTCGGATGCCCGGTaGCCGCACATGAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCNFCGSSSSRGQIQAVSCSDAR*PHMRAA Trigger: AGCAGCCCTCATGTGCGGGCACCGGGCATCCGAGCA...GGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GCTATTCGGAAAACGTGGAGGCCCCACTTGTTCACATCTTCTAGTTCCTTGGCCTGCTCGGATGCCCGGTaGCCGCACATGAGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AIRKTWRPHLFTSSSSLACSDAR*PHMRAA Trigger: AGCAGCCCTCATGTGCGGGCACCGGGCATCCGAGCA...GGCCAAGGAACTAGAAGATGTGAACAAGTGGGGCCTCCACGTTTTCCGAATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
||
| CDS-3UTR GCA 90 bp | TGCATGATAACAGTCAGAGGCCGGTTACCAGACAGCTCTGCTATTCGGAAAACGCCCGCCATGCTCGGATaGCCGGTGCCCGCACATGAG | + |
|
Preference number: 4 (lower is better) Translates to: CMITVRGRLPDSSAIRKTPAMLG*PVPAHE Trigger: CTCATGTGCGGGCACCGGGCATCCGAGCATGGCGGG...CGTTTTCCGAATAGCAGAGCTGTCTGGTAACCGGCCTCTGACTGTTATCATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
||
| CDS-3UTR CCA 90 bp | GGGGGTGGGGTGGGTGAGAGAACTGGTTACAATATTCCTGAGCGCCAGACTGAGAGAGCAGCACGTGAGTaGACTGGACGACGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGGVGERTGYNIPERQTERAARE*TGRRLQ Trigger: CTGCAGACGTCGTCCAGTCCACTCACGTGCTGCTCT...CTCAGTCTGGCGCTCAGGAATATTGTAACCAGTTCTCTCACCCACCCCACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGTTCATGGGATGTACGAGGTCTaGCCACGTCTCCCAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVAHPPPGDRSKLCPVHGMYEV*PRLPEW Trigger: CCACTCTGGGAGACGTGGGCAGACCTCGTACATCCC...ATGAACAGGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GAGCAGACTCCCCTGGCAGGTGGAGGAGTGGAAGTAAAGGAGGAGCCAATGGACGCTTCCTCCTCAACCTaGTCGTCAAGGGGAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EQTPLAGGGVEVKEEPMDASSST*SSRGIS Trigger: TGAAATTCCCCTTGACGAGCAGGTTGAGGAGGAAGC...GTCCATTGGCTCCTCCTTTACTTCCACTCCTCCACCTGCCAGGGGAGTCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGACTCCCCTGGCAGGTGGAGGAGTGGAAGTAAAGGAGGAGCCAATGGACACGCAAGTTTCAGGCTaGCTTTCCTCTTCCGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: EQTPLAGGGVEVKEEPMDTQVSG*LSSSAT Trigger: TGTAGCGGAAGAGGAAAGCCAGCCTGAAACTTGCGT...GTCCATTGGCTCCTCCTTTACTTCCACTCCTCCACCTGCCAGGGGAGTCTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GTTCGGGTGACTACAAGGACAGCATTTGTGAATGCATGTCTCCTGAGACAGGGCTGGGACTTATCTCCATaGCACGCTCCCGCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRVTTRTAFVNACLLRQGWDLSP*HAPALG Trigger: ACCGAGAGCGGGAGCGTGGCATGGAGATAAGTCCCA...GCCCTGTCTCAGGAGACATGCATTCACAAATGCTGTCCTTGTAGTCACCCGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GTTCGGGTGACTACAAGGACAGCATTTGTGAATGCATGTCTCCTGAGACAGGGCATCTCACTGACGGAGTaGCTGGTCTGCAGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRVTTRTAFVNACLLRQGISLTE*LVCRVS Trigger: AGAGACCCTGCAGACCAGGCACTCCGTCAGTGAGAT...GCCCTGTCTCAGGAGACATGCATTCACAAATGCTGTCCTTGTAGTCACCCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGTGGGGTGGGTGAGAGAACTGGTTACAATATTCCTGAGCGCCAGACTGAGGTTACCAGACAGCTCTaGTATTCGGAAAACGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GGGVGERTGYNIPERQTEVTRQL*YSENVE Trigger: CTCCACGTTTTCCGAATAGCAGAGCTGTCTGGTAAC...CTCAGTCTGGCGCTCAGGAATATTGTAACCAGTTCTCTCACCCACCCCACCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GTTCGGGTGACTACAAGGACAGCATTTGTGAATGCATGTCTCCTGAGACAGGGCTTTTCAGTCTGTCCCTaGCGGCCCTCCTCTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VRVTTRTAFVNACLLRQGFSVCP*RPSSWS Trigger: TGACCAAGAGGAGGGCCGGCAGGGACAGACTGAAAA...GCCCTGTCTCAGGAGACATGCATTCACAAATGCTGTCCTTGTAGTCACCCGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGCCTCCAGGGTCTCGCTaGCCAGTTTCTGGTAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LENVTVFFLEQLKAHRQVPPGSR*PVSGRP Trigger: AGGCCTACCAGAAACTGGCCAGCGAGACCCTGGAGG...CACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
||
| CDS-3UTR CCA 90 bp | GTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGGGGGATTGTGCTCTaGTACCACTCACGATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCNFCGSSSSRGQIQAVSWGIVL*YHSRLS Trigger: GGACAATCGTGAGTGGTACCAGAGCACAATCCCCCA...GGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR TCA 90 bp | GTTCGGGTGACTACAAGGACAGCATTTGTGAATGCATGTCTCCTGAGACAGGGCGAATCTCCAAGTCTGTaGACACAGCCTCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VRVTTRTAFVNACLLRQGESPSL*TQPPKR Trigger: CCGCTTTGGAGGCTGTGTTCACAGACTTGGAGATTC...GCCCTGTCTCAGGAGACATGCATTCACAAATGCTGTCCTTGTAGTCACCCGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | AATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGGTTACGGAGTGCCTGGTCTaGAGGGTCTCTAGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: NVTVFFLEQLKAHRQVMVTECLV*RVSSWS Trigger: GGACCAGCTAGAGACCCTGCAGACCAGGCACTCCGT...AACCATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAGCAAACCAGAAAGGAACCCTGCAATCCGATCTTAGCGTCTGGGCAGCTGGCCAGGACATCTTCCTaGTCCGTTTTAACCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CKQTRKEPCNPILASGQLARTSS*SVLTPN Trigger: GTTTGGGGTTAAAACGGAGCAGGAAGATGTCCTGGC...CAGCTGCCCAGACGCTAAGATCGGATTGCAGGGTTCCTTTCTGGTTTGCTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAGCAAACCAGAAAGGAACCCTGCAATCCGATCTTAGCGTCTGGGCAGCTGGCTATTCGGAAAACGTaGAGGCCCCACTTGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: CKQTRKEPCNPILASGQLAIRKT*RPHLFT Trigger: TGTGAACAAGTGGGGCCTCCACGTTTTCCGAATAGC...CAGCTGCCCAGACGCTAAGATCGGATTGCAGGGTTCCTTTCTGGTTTGCTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | AATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGGTTAGAGCAGCACGTGAGTaGACTGGACGACGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVTVFFLEQLKAHRQVMVRAARE*TGRRLQ Trigger: CTGCAGACGTCGTCCAGTCCACTCACGTGCTGCTCT...AACCATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR CCA 90 bp | ATCCGCTTTGTCAGCTCTGCCAAGCTGACGTCACGTCCACGTCCTGTACGTGAATTTGACACCCCAGGATaGTCCACATCATGTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IRFVSSAKLTSRPRPVREFDTPG*STSCIA Trigger: TGCAATACATGATGTGGACCATCCTGGGGTGTCAAA...TTCACGTACAGGACGTGGACGTGACGTCAGCTTGGCAGAGCTGACAAAGCGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| 3UTR CAA 72 bp | TTAGCGTCTGGGCAGCTGGATGGGCCACAGGCTCCCTaGAAAACAGTTGGAGTCAATTTTATCCGCTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LASGQLDGPQAP*KTVGVNFIRFV Trigger: GACAAAGCGGATAAAATTGACTCCAACTGTTTTCAAGGGAGCCTGTGGCCCATCCAGCTGCCCAGACGCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| 3UTR CAA 72 bp | GACAGCTCTGCTATTCGGAAAACGTGGAGGCCCCACTaGTTCACATCTTCTAGTTCCTTGGCCAGGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: DSSAIRKTWRPH*FTSSSSLARTS Trigger: AGATGTCCTGGCCAAGGAACTAGAAGATGTGAACAAGTGGGGCCTCCACGTTTTCCGAATAGCAGAGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119672.8 |
||
| CDS-3UTR GCA 90 bp | GACAAGCTGATGGAGCAAGAAGAATCAATAGCAAAGTCCACATGTTACCAGACTACGGAGTGCCTGGTCTaGAGGGTCTCTAGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DKLMEQEESIAKSTCYQTTECLV*RVSSWS Trigger: GGACCAGCTAGAGACCCTGCAGACCAGGCACTCCGT...AGTCTGGTAACATGTGGACTTTGCTATTGATTCTTCTTGCTCCATCAGCTTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATGCCGGCCCTCCTCTTaGTCATCAGGTGCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLCRPSS*SSGAGE Trigger: CTCCCCTGCACCTGATGACCAAGAGGAGGGCCGGCA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLGTPSR*CAIVHI Trigger: GATGTGGACAATGGCACATCAGCGGGACGGAGTCCC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
||
| CDS-3UTR TCA 90 bp | AATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGGTTGAATCTCCAAGTCTGTaGACACAGCCTCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NVTVFFLEQLKAHRQVMVESPSL*TQPPKR Trigger: CCGCTTTGGAGGCTGTGTTCACAGACTTGGAGATTC...AACCATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGTTCATGACGCCAGGACAATGTCAATaGCCATTTTCCTTAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: LWLILLQGTDPSCVLFMTPGQCQ*PFSLKI Trigger: AATCTTTAAGGAAAATGGTCATTGACATTGTCCTGG...CGTCATGAACAGGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAACGGAGTGCCTGGTCTaGAGGGTCTCTAGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLTECLV*RVSSWS Trigger: GGACCAGCTAGAGACCCTGCAGACCAGGCACTCCGT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGGCCAGGACATCTTCCTaGTCCGTTTTAACCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LENVTVFFLEQLKAHRQVARTSS*SVLTPN Trigger: GTTTGGGGTTAAAACGGAGCAGGAAGATGTCCTGGC...CACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGGGATGTACGAGGTCTaGCCACGTCTCCCAGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLGMYEV*PRLPEW Trigger: CCACTCTGGGAGACGTGGGCAGACCTCGTACATCCC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGGTTGGCTTAATGTCTTaGCTCACTGCCAGCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LENVTVFFLEQLKAHRQVVGLMS*LTASTP Trigger: TGGAGTGCTGGCAGTGAGGCAAGACATTAAGCCAAC...CACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAACCCTGGGCTGGTCATaGGATCCAAGGGACTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLTLGWS*DPRDSV Trigger: GACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTACCTCCAGGGTCTCGCTaGCCAGTTTCTGGTAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLPPGSR*PVSGRP Trigger: AGGCCTACCAGAAACTGGCCAGCGAGACCCTGGAGG...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | AATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGGTTAGCGAGTTCCGAGTCTaGAAAGAAGAGCAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NVTVFFLEQLKAHRQVMVSEFRV*KEEQQQ Trigger: CTGCTGCTGCTCTTCTTTCCAGACTCGGAACTCGCT...AACCATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| 3UTR CAA 72 bp | TTCCCTGGGCAGTTCAAACAACAGCTGTCCTGGTATTaGTCGATAGAGACAGCTGACAGTCTTAAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPGQFKQQLSWY*SIETADSLKTC Trigger: GCAGGTCTTAAGACTGTCAGCTGTCTCTATCGACAAATACCAGGACAGCTGTTGTTTGAACTGCCCAGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGGTTAGGCTGGAGCTGTaGATCAACTTCTTGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENVTVFFLEQLKAHRQVMVRLEL*INFLTP Trigger: TGGGGTCAAGAAGTTGATGCACAGCTCCAGCCTAAC...CATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGGTTACCAGACAGCTCTaGTATTCGGAAAACGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LENVTVFFLEQLKAHRQVVTRQL*YSENVE Trigger: CTCCACGTTTTCCGAATAGCAGAGCTGTCTGGTAAC...CACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATGGGACTTATCTCCATaGCACGCTCCCGCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLWDLSP*HAPALG Trigger: ACCGAGAGCGGGAGCGTGGCATGGAGATAAGTCCCA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGGCTATTCGGAAAACGTaGAGGCCCCACTTGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: ENVTVFFLEQLKAHRQVMAIRKT*RPHLFT Trigger: TGTGAACAAGTGGGGCCTCCACGTTTTCCGAATAGC...CATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAAGAGCAGCACGTGAGTaGACTGGACGACGTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLRAARE*TGRRLQ Trigger: CTGCAGACGTCGTCCAGTCCACTCACGTGCTGCTCT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | ATATTCCTGAGCGCCAGACTGAGTAGTTCAAGGTCAGTTTTGTTCAACAAACGTGTGTCCAAGATGTCCTaGGCATCGGGATGTACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFLSARLSSSRSVLFNKRVSKMS*ASGCTR Trigger: CCTCGTACATCCCGATGCCCAGGACATCTTGGACAC...ACGTTTGTTGAACAAAACTGACCTTGAACTACTCAGTCTGGCGCTCAGGAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR TCA 90 bp | GTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCAACAAATCTCGTTCCTaGAAAATGGTGTGCATGATA | + |
|
Preference number: 4 (lower is better) Translates to: VCNFCGSSSSRGQIQAVSNKSRS*KMVCMI Trigger: TATCATGCACACCATTTTTCAGGAACGAGATTTGTT...GGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR TCA 90 bp | ATATTCCTGAGCGCCAGACTGAGTAGTTCAAGGTCAGTTTTGTTCAACAAACGTCAGTGCACCATATTCTaGAGGACCTGGATCCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IFLSARLSSSRSVLFNKRQCTIF*RTWILS Trigger: CGACAGGATCCAGGTCCTTCAGAATATGGTGCACTG...ACGTTTGTTGAACAAAACTGACCTTGAACTACTCAGTCTGGCGCTCAGGAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCTGTTCATGAACGATATAGTCTATaGAGCCCACCTGTGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISVAHPPPGDRSKLCPVHERYSL*SPPVIF Trigger: AAAAATCACAGGTGGGCTTCATAGACTATATCGTTC...ATGAACAGGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAATCTCACTGACGGAGTaGCTGGTCTGCAGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLISLTE*LVCRVS Trigger: AGAGACCCTGCAGACCAGGCACTCCGTCAGTGAGAT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAAAAGTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGGTCCACATCATGTATTaGACTGGCAAAAATGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LEKYAISVAHPPPGDRSKVHIMY*TGKNGR Trigger: GCGGCCATTTTTGCCAGTGCAATACATGATGTGGAC...CTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATACTTTTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGGTCCACATCATGTATTaGACTGGCAAAAATGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: ENVTVFFLEQLKAHRQVMVHIMY*TGKNGR Trigger: GCGGCCATTTTTGCCAGTGCAATACATGATGTGGAC...CATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGCCAGCAGGTTCATGTaGTTCGACATGTCTGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLASRFM*FDMSVA Trigger: GGCGACAGACATGTCGAAGCACATGAACCTGCTGGC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATTTTCAGTCTGTCCCTaGCGGCCCTCCTCTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLFSVCP*RPSSWS Trigger: TGACCAAGAGGAGGGCCGGCAGGGACAGACTGAAAA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGAGGTGGAAGCTGAATaGTGCGGGAAGAAAGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLEVEAE*CGKKVA Trigger: GGCGACTTTCTTCCCGCAGCATTCAGCTTCCACCTC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | AAAGGAAAATTAGCATGGGCTCCAAACCTTACACCAAGAAGACAACTAAGGTCTCTGGTAGGCCTCCTCTaGGAAGAGACAGGGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGKLAWAPNLTPRRQLRSLVGLL*EETGKG Trigger: TCCTTTCCCTGTCTCTTCGCAGAGGAGGCCTACCAG...AGACCTTAGTTGTCTTCTTGGTGTAAGGTTTGGAGCCCATGCTAATTTTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAAATCAGCCCAGACCCTaGGCTGGTCATGGGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLNQPRP*AGHGIQ Trigger: TTGGATCCCATGACCAGCCCAGGGTCTGGGCTGATT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | CTGGACGTAATGCACATTAACGTATTACAGAATAAATACTCACTTTGCACACAGCCTCCAGGGTCTCGCTaGCCAGTTTCTGGTAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDVMHINVLQNKYSLCTQPPGSR*PVSGRP Trigger: AGGCCTACCAGAAACTGGCCAGCGAGACCCTGGAGG...CTGTGTGCAAAGTGAGTATTTATTCTGTAATACGTTAATGTGCATTACGTCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | AATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGGTTTTGCACTGGCAAAAATaGCCGCGAGAATCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVTVFFLEQLKAHRQVMVLHWQK*PRESPS Trigger: ACTTGGAGATTCTCGCGGCCATTTTTGCCAGTGCAA...AACCATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGTTTGACACCCCAGGATaGTCCACATCATGTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LENVTVFFLEQLKAHRQVFDTPG*STSCIA Trigger: TGCAATACATGATGTGGACCATCCTGGGGTGTCAAA...CACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGTGTCCAAGATGTCCTaGGCATCGGGATGTACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLVSKMS*ASGCTR Trigger: CCTCGTACATCCCGATGCCCAGGACATCTTGGACAC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATCTGAAGGCCAGAGGTaGAAGCTGAATGCTGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLSEGQR*KLNAAG Trigger: TCCCGCAGCATTCAGCTTCCACCTCTGGCCTTCAGA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGGGTCACCAAAGCTGTTaGCTTAATGTCTTGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ENVTVFFLEQLKAHRQVMGHQSC*LNVLPH Trigger: GTGAGGCAAGACATTAAGCCAACAGCTTTGGTGACC...CATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| 3UTR CAA 72 bp | GTTTCTTTTTCCTCGGTCAGAATGGTAGTGACAGACTaGGTAAGACCCCCATCAAGTGAACAAGTGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSFSSVRMVVTD*VRPPSSEQVQR Trigger: CCTCTGCACTTGTTCACTTGATGGGGGTCTTACCAAGTCTGTCACTACCATTCTGACCGAGGAAAAAGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAAAGGACTCCCGGCGTTaGCTGTGGACAAAGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLKDSRR*LWTKFA Trigger: AGCAAACTTTGTCCACAGTCAACGCCGGGAGTCCTT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATTGGTTGCACATGGGTaGTCTTTTGCTGGGTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLLVAHG*SFAGCS Trigger: CGAGCACCCAGCAAAAGATCACCCATGTGCAACCAA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGAATCTCCAAGTCTGTaGACACAGCCTCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLESPSL*TQPPKR Trigger: CCGCTTTGGAGGCTGTGTTCACAGACTTGGAGATTC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTACAGTGCACCATATTCTaGAGGACCTGGATCCTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLQCTIF*RTWILS Trigger: CGACAGGATCCAGGTCCTTCAGAATATGGTGCACTG...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATCCGTCCCGCTGATGTaGCATTGTCCACATCGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLSVPLM*HCPHRN Trigger: GTTTCGATGTGGACAATGGCACATCAGCGGGACGGA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | GAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGCATCATGTATTGCACTaGCAAAAATGGCCGCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ENVTVFFLEQLKAHRQVMHHVLH*QKWPRE Trigger: TTCTCGCGGCCATTTTTGCCAGTGCAATACATGATG...CATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAAGTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCCACGTCTCCCAGAGTaGATGAACGATATAGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LEKYAISVAHPPPGDRSKPRLPE*MNDIVY Trigger: ATAGACTATATCGTTCATCCACTCTGGGAGACGTGG...CTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATACTTTTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATGGGGGATTGTGCTCTaGTACCACTCACGATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLWGIVL*YHSRLS Trigger: GGACAATCGTGAGTGGTACCAGAGCACAATCCCCCA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | ATATTCCTGAGCGCCAGACTGAGTAGTTCAAGGTCAGTTTTGTTCAACAAACGTCAAGGGGAATTTCAGTaGACTCTGAGTCTTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFLSARLSSSRSVLFNKRQGEFQ*TLSLGC Trigger: GCACCCAAGACTCAGAGTCCACTGAAATTCCCCTTG...ACGTTTGTTGAACAAAACTGACCTTGAACTACTCAGTCTGGCGCTCAGGAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGTCCTTTTCAGTGTCTaGCTCGCAGTCTTCCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLVLFSV*LAVFLQ Trigger: TTGGAGGAAGACTGCGAGTCAGACACTGAAAAGGAC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGTTAGGCTGGAGCTGTaGATCAACTTCTTGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLVRLEL*INFLTP Trigger: TGGGGTCAAGAAGTTGATGCACAGCTCCAGCCTAAC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGCCAGGACATCTTCCTaGTCCGTTTTAACCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLARTSS*SVLTPN Trigger: GTTTGGGGTTAAAACGGAGCAGGAAGATGTCCTGGC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGCTTCCTCCTCAACCTaGTCGTCAAGGGGAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLASSST*SSRGIS Trigger: TGAAATTCCCCTTGACGAGCAGGTTGAGGAGGAAGC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGCTATTCGGAAAACGTaGAGGCCCCACTTGTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLAIRKT*RPHLFT Trigger: TGTGAACAAGTGGGGCCTCCACGTTTTCCGAATAGC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | ATATTCCTGAGCGCCAGACTGAGTAGTTCAAGGTCAGTTTTGTTCAACAAACGTTTGCACTGGCAAAAATaGCCGCGAGAATCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLSARLSSSRSVLFNKRLHWQK*PRESPS Trigger: ACTTGGAGATTCTCGCGGCCATTTTTGCCAGTGCAA...ACGTTTGTTGAACAAAACTGACCTTGAACTACTCAGTCTGGCGCTCAGGAATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGTGGACTCTGAGTCTTaGGTGCACAGAGTCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLVDSES*VHRVLE Trigger: CTCTAAGACTCTGTGCACCCAAGACTCAGAGTCCAC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAAATTAGCATGGGCTCCAAACCTTACACCAAGAAGACAACTAAGGTCTGTGGACTCTGAGTCTTaGGTGCACAGAGTCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGKLAWAPNLTPRRQLRSVDSES*VHRVLE Trigger: CTCTAAGACTCTGTGCACCCAAGACTCAGAGTCCAC...AGACCTTAGTTGTCTTCTTGGTGTAAGGTTTGGAGCCCATGCTAATTTTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTACAAGGGGAATTTCAGTaGACTCTGAGTCTTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLQGEFQ*TLSLGC Trigger: GCACCCAAGACTCAGAGTCCACTGAAATTCCCCTTG...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAACGCAAGTTTCAGGCTaGCTTTCCTCTTCCGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLTQVSG*LSSSAT Trigger: TGTAGCGGAAGAGGAAAGCCAGCCTGAAACTTGCGT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| 3UTR CAA 72 bp | ACGCGTCATCAAATGCCTTCTTTCTTCTTAACACGTTaGCAAGCAAACCAGAAAGGAACCCTGCAATCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRHQMPSFFLTR*QANQKGTLQSD Trigger: ATCGGATTGCAGGGTTCCTTTCTGGTTTGCTTGCAAACGTGTTAAGAAGAAAGAAGGCATTTGATGACGCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGAACAAATCTCGTTCCTaGAAAATGGTGTGCATGATA | + |
|
Preference number: 4 (lower is better) Translates to: LENVTVFFLEQLKAHRQVNKSRS*KMVCMI Trigger: TATCATGCACACCATTTTTCAGGAACGAGATTTGTT...CACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAAATTTCAGTGGACTCTaGGTCTTGGGTGCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLNFSGL*VLGAQS Trigger: ACTCTGTGCACCCAAGACTCAGAGTCCACTGAAATT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGTTACCAGACAGCTCTaGTATTCGGAAAACGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLVTRQL*YSENVE Trigger: CTCCACGTTTTCCGAATAGCAGAGCTGTCTGGTAAC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGTCCACATCATGTATTaGACTGGCAAAAATGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLVHIMY*TGKNGR Trigger: GCGGCCATTTTTGCCAGTGCAATACATGATGTGGAC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTACCTGGACATAGACTTTaGAGAGAGGTCATAGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLPGHRL*REVIVA Trigger: AGCGACTATGACCTCTCTCCAAAGTCTATGTCCAGG...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATGGGTGATCTTTTGCTaGGTGCTCGGTCTTGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLWVIFC*VLGLAN Trigger: ATTTGCAAGACCGAGCACCCAGCAAAAGATCACCCA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAATGGTTGGTTGCACATaGGTGATCTTTTGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLMVGCT*VIFCWV Trigger: CACCCAGCAAAAGATCACCCATGTGCAACCAACCAT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATTGCACTGGCAAAAATaGCCGCGAGAATCTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLLHWQK*PRESPS Trigger: ACTTGGAGATTCTCGCGGCCATTTTTGCCAGTGCAA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | GACAAGCTGATGGAGCAAGAAGAATCAATAGCAAAGTCCACATGTTACCAGACTCATCATGTATTGCACTaGCAAAAATGGCCGCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DKLMEQEESIAKSTCYQTHHVLH*QKWPRE Trigger: TTCTCGCGGCCATTTTTGCCAGTGCAATACATGATG...AGTCTGGTAACATGTGGACTTTGCTATTGATTCTTCTTGCTCCATCAGCTTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAATCGAGAAATGTGTTTaGGATGTACTCCGACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLIEKCV*DVLRHL Trigger: CAGGTGTCGGAGTACATCTCAAACACATTTCTCGAT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAACTGTGGACAAAGTTTaGTTGGAGAATCAGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLTVDKV*LENQPR Trigger: TCTGGGCTGATTCTCCAAGCAAACTTTGTCCACAGT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
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| CDS-3UTR GCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATTCGCTTCGCAAGTCTaGTTGTTCCAACTGTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLFASQV*LFQLSE Trigger: TTCAGACAGTTGGAACAAGCAGACTTGCGAAGCGAA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTACATCATGTATTGCACTaGCAAAAATGGCCGCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLHHVLH*QKWPRE Trigger: TTCTCGCGGCCATTTTTGCCAGTGCAATACATGATG...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATTTGACACCCCAGGATaGTCCACATCATGTATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLFDTPG*STSCIA Trigger: TGCAATACATGATGTGGACCATCCTGGGGTGTCAAA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTACCACGTCTCCCAGAGTaGATGAACGATATAGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLPRLPE*MNDIVY Trigger: ATAGACTATATCGTTCATCCACTCTGGGAGACGTGG...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR TCA 90 bp | CTGGACGTAATGCACATTAACGTATTACAGAATAAATACTCACTTTGCACACAGAATTTCAGTGGACTCTaGGTCTTGGGTGCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LDVMHINVLQNKYSLCTQNFSGL*VLGAQS Trigger: ACTCTGTGCACCCAAGACTCAGAGTCCACTGAAATT...CTGTGTGCAAAGTGAGTATTTATTCTGTAATACGTTAATGTGCATTACGTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATTGTTGATGGATGGTTaGTTGCACATGGGTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLLLMDG*LHMGDL Trigger: AAGATCACCCATGTGCAACCAACCATCCATCAACAA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATCTTGGTTTCAACCATaGTTTTCAGATCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLSWFQP*FSDQPA Trigger: TGCTGGCTGATCTGAAAACCATGGTTGAAACCAAGA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR TCA 90 bp | CTGGACGTAATGCACATTAACGTATTACAGAATAAATACTCACTTTGCACACAGATCGAGAAATGTGTTTaGGATGTACTCCGACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LDVMHINVLQNKYSLCTQIEKCV*DVLRHL Trigger: CAGGTGTCGGAGTACATCTCAAACACATTTCTCGAT...CTGTGTGCAAAGTGAGTATTTATTCTGTAATACGTTAATGTGCATTACGTCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGAACGATATAGTCTATaGAGCCCACCTGTGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLERYSL*SPPVIF Trigger: AAAAATCACAGGTGGGCTTCATAGACTATATCGTTC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAAACAAATCTCGTTCCTaGAAAATGGTGTGCATGATA | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLNKSRS*KMVCMI Trigger: TATCATGCACACCATTTTTCAGGAACGAGATTTGTT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR TCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTACCAGGACAATGTCAATaGCCATTTTCCTTAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLPGQCQ*PFSLKI Trigger: AATCTTTAAGGAAAATGGTCATTGACATTGTCCTGG...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATGTAGACCTGGATCTTaGCTTCATTATAATGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLCRPGS*LHYNAH Trigger: ATGAGCATTATAATGAAGCCAAGATCCAGGTCTACA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000074103.12 |
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| CDS-3UTR CCA 90 bp | CTGGACGTAATGCACATTAACGTATTACAGAATAAATACTCACTTTGCACACAGTCTTGGTTTCAACCATaGTTTTCAGATCAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDVMHINVLQNKYSLCTQSWFQP*FSDQPA Trigger: TGCTGGCTGATCTGAAAACCATGGTTGAAACCAAGA...CTGTGTGCAAAGTGAGTATTTATTCTGTAATACGTTAATGTGCATTACGTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS-3UTR CCA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAAAGGTTAGTTCAAACTaGAATTTTTCAGTCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GVTMVVACDMHFGNNIFLKVSSN*NFSVCP Trigger: GGGACAGACTGAAAAATTCCAGTTTGAACTAACCTT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR CCA 90 bp | AAAGGAAAATTAGCATGGGCTCCAAACCTTACACCAAGAAGACAACTAAGGTCTAAGGTTAGTTCAAACTaGAATTTTTCAGTCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGKLAWAPNLTPRRQLRSKVSSN*NFSVCP Trigger: GGGACAGACTGAAAAATTCCAGTTTGAACTAACCTT...AGACCTTAGTTGTCTTCTTGGTGTAAGGTTTGGAGCCCATGCTAATTTTCCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS TCA 90 bp | CTCGGTGTCCGAGTAGCCGCGGTGCCGGACGCGGCTGGCCCCGCTTaGGGCGTAGCGACCACGGGTAGCTCCGGGTGGTGGCGGGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LGVRVAAVPDAAGPA*GVATTGSSGWWRGW Trigger: CCACCCCCGCCACCACCCGGAGCTACCCGTGGTCGCTACGCCTCAAGCGGGGCCAGCCGCGTCCGGCACCGCGGCTACTCGGACACCGAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
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| CDS CCA 90 bp | GGCCCGGCCGGTGACCTGTCTCCACCGCGTAGGAGGTGCGGTCCATaGCACGGCAGTACAGGTAGCGCTCGGTGTCCGAGTAGCCGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GPAGDLSPPRRRCGP*HGSTGSARCPSSRG Trigger: ACCGCGGCTACTCGGACACCGAGCGCTACCTGTACTGCCGTGCCATGGACCGCACCTCCTACGCGGTGGAGACAGGTCACCGGCCGGGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
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| CDS GCA 90 bp | GGCTGCCGGAGCGGGTACTGGTGGTGCTGCTCGTGCCTCCAGAGATaGTTAGGGGCTTTGAGAGCGGCCCCGCCAGCGCTGTCATTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GCRSGYWWCCSCLQR*LGALRAAPPALSLP Trigger: GGGCAATGACAGCGCTGGCGGGGCCGCTCTCAAAGCCCCTAAGCATCTCTGGAGGCACGAGCAGCACCACCAGTACCCGCTCCGGCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
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| CDS GCA 90 bp | GTAAGCGCTTCACGGGACCACCAGCGAGTTCAAAGGGGGCCATCCTaGCGTACCCCGCCATGCTCGGATGCCCGGTGCCCGCACATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSASRDHQRVQRGPS*RTPPCSDARCPHMR Trigger: CCTCATGTGCGGGCACCGGGCATCCGAGCATGGCGGGGTACGGCAGGATGGCCCCCTTTGAACTCGCTGGTGGTCCCGTGAAGCGCTTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS GCA 90 bp | GGGTGCAAGAGGCGGAACTGGGGCTGCCGGAGCGGGTACTGGTGGTaGTGCTCGTGCCTCCAGAGATGCTTAGGGGCTTTGAGAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GCKRRNWGCRSGYWW*CSCLQRCLGALRAA Trigger: GGCCGCTCTCAAAGCCCCTAAGCATCTCTGGAGGCACGAGCAGCACCACCAGTACCCGCTCCGGCAGCCCCAGTTCCGCCTCTTGCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
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| CDS GCA 90 bp | ATTTCTTCAGGCCCGGCCGGTGACCTGTCTCCACCGCGTAGGAGGTaGGGTCCATGGCACGGCAGTACAGGTAGCGCTCGGTGTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ISSGPAGDLSPPRRR*GPWHGSTGSARCPS Trigger: ACTCGGACACCGAGCGCTACCTGTACTGCCGTGCCATGGACCGCACCTCCTACGCGGTGGAGACAGGTCACCGGCCGGGCCTGAAGAAAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
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| CDS TCA 90 bp | CCCAGACCCTGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACAAACTGCCTCCGTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRPWAGHGIQGTPSR*CAIVHIETNCLRCP Trigger: AGGACAACGGAGGCAGTTTGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074103.12 |
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| CDS TCA 90 bp | CCCAGACCCTGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACGTCTGAGTCCCTGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRPWAGHGIQGTPSR*CAIVHIETSESLER Trigger: TCTTTCCAGGGACTCAGACGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGTCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
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| CDS GCA 90 bp | ACCCTGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTGATGTaGCATTGTCCACATCGAAACAAACTGCCTCCGTTGTCCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLGWSWDPRDSVPLM*HCPHRNKLPPLSSG Trigger: CCCTGAGGACAACGGAGGCAGTTTGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074103.12 |
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| CDS TCA 90 bp | CCCAGACCCTGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACGTCTCCTCTGTGGCTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: PRPWAGHGIQGTPSR*CAIVHIETSPLWLN Trigger: ATTAAGCCACAGAGGAGACGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079975.11 |
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| CDS-3UTR CAA 90 bp | GTTCGGGTGACTACAAGGACAGCATTTGTGAATGCATGTCTCCTGAGACAGGGCCTGCCGGCCCTCCTCTaGGTCATCAGGTGCAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRVTTRTAFVNACLLRQGLPALL*VIRCRG Trigger: TCCCCTGCACCTGATGACCAAGAGGAGGGCCGGCAG...GCCCTGTCTCAGGAGACATGCATTCACAAATGCTGTCCTTGTAGTCACCCGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS TCA 90 bp | CCCAGACCCTGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACATATCCAGGAATGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRPWAGHGIQGTPSR*CAIVHIETYPGMPS Trigger: AGAAGGCATTCCTGGATATGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119507.8 |
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| CDS TCA 90 bp | CCCAGACCCTGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACATGTATGTGCCACTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PRPWAGHGIQGTPSR*CAIVHIETCMCHCE Trigger: TTCACAGTGGCACATACATGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
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| CDS CCA 90 bp | GGACAAAGTTTGCTTGGAGAATCAGCCCAGACCCTGGGCTGGTCATaGGATCCAAGGGACTCCGTCCCGCTGATGTGCCATTGTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: GQSLLGESAQTLGWS*DPRDSVPLMCHCPH Trigger: ATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGTCTGGGCTGATTCTCCAAGCAAACTTTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000074103.12 ENSMUST00000079975.11 ENSMUST00000119507.8 ENSMUST00000120671.8 ENSMUST00000122041.8 ENSMUST00000135275.8 ENSMUST00000153234.8 ENSMUST00000177907.8 |
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| CDS CCA 90 bp | TGTTGCTACTCAGAAGCATCCTGCGCAGGAGCCTGGGGGAATTCCTaGGAGAAATCACCGGGGAGAGCTTGGGAGAAACGGATTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CCYSEASCAGAWGNS*EKSPGRAWEKRISS Trigger: CGAGGAAATCCGTTTCTCCCAAGCTCTCCCCGGTGATTTCTCCCAGGAATTCCCCCAGGCTCCTGCGCAGGATGCTTCTGAGTAGCAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
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| CDS-3UTR CAA 90 bp | ATCCGCTTTGTCAGCTCTGCCAAGCTGACGTCACGTCCACGTCCTGTACGTGAATACTCCGACACCTGGTaGCCAGACCGACTCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: IRFVSSAKLTSRPRPVREYSDTW*PDRLIS Trigger: TGAGATGAGTCGGTCTGGCAACCAGGTGTCGGAGTA...TTCACGTACAGGACGTGGACGTGACGTCAGCTTGGCAGAGCTGACAAAGCGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS-3UTR CAA 90 bp | GGGGGTGGGGTGGGTGAGAGAACTGGTTACAATATTCCTGAGCGCCAGACTGAGCTGTGCATCAACTTCTaGACCCCACTGATCTGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GGGVGERTGYNIPERQTELCINF*TPLICD Trigger: GTCGCAGATCAGTGGGGTCAAGAAGTTGATGCACAG...CTCAGTCTGGCGCTCAGGAATATTGTAACCAGTTCTCTCACCCACCCCACCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS-3UTR CAA 90 bp | ATCCGCTTTGTCAGCTCTGCCAAGCTGACGTCACGTCCACGTCCTGTACGTGAAGGAGGACGCCGGAGCTaGTCACCTTCTTGGTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: IRFVSSAKLTSRPRPVREGGRRS*SPSWFQ Trigger: TTGAAACCAAGAAGGTGACAAGCTCCGGCGTCCTCC...TTCACGTACAGGACGTGGACGTGACGTCAGCTTGGCAGAGCTGACAAAGCGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
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| CDS CCA 90 bp | TTCGCTTCGCAAGTCTGCTTGTTCCAACTGTCTGAAGGCCAGAGGTaGAAGCTGAATGCTGCGGGAAGAAAGTCGCCGTACGAGATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FASQVCLFQLSEGQR*KLNAAGRKSPYEIG Trigger: CCCTATCTCGTACGGCGACTTTCTTCCCGCAGCATTCAGCTTCCACCTCTGGCCTTCAGACAGTTGGAACAAGCAGACTTGCGAAGCGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122041.8 ENSMUST00000177907.8 |
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| CDS-3UTR CAA 90 bp | GGGGGTGGGGTGGGTGAGAGAACTGGTTACAATATTCCTGAGCGCCAGACTGAGGGTCCACATCATGTATaGCACTGGCAAAAATGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GGGVGERTGYNIPERQTEGPHHV*HWQKWP Trigger: CGGCCATTTTTGCCAGTGCAATACATGATGTGGACC...CTCAGTCTGGCGCTCAGGAATATTGTAACCAGTTCTCTCACCCACCCCACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS TCA 90 bp | AGGCAGGATTTTCAAGGGGAGGCTAGTTGGCCGAGGGATGTTCTCTaGTTCGCTTCGCAAGTCTGCTTGTTCCAACTGTCTGAAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQDFQGEASWPRDVL*FASQVCLFQLSEGQ Trigger: CTGGCCTTCAGACAGTTGGAACAAGCAGACTTGCGAAGCGAATCAGAGAACATCCCTCGGCCAACTAGCCTCCCCTTGAAAATCCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122041.8 ENSMUST00000177907.8 |
||
| CDS GCA 90 bp | CGCAGGGATTTCACAAGATCCTCATTGAGCCATGGGTTTGGAACATaGGGATTATCCACTTCAGGGACTGTAAGGGTGTCCGGGCTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRDFTRSSLSHGFGT*GLSTSGTVRVSGLV Trigger: GACAAGCCCGGACACCCTTACAGTCCCTGAAGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAAATCCCTGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
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| CDS-3UTR CAA 90 bp | ATCCGCTTTGTCAGCTCTGCCAAGCTGACGTCACGTCCACGTCCTGTACGTGAAATCCTTTTGAACTTGTaGGAGGCCATCTCACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: IRFVSSAKLTSRPRPVREILLNL*EAISLT Trigger: CGTCAGTGAGATGGCCTCCAACAAGTTCAAAAGGAT...TTCACGTACAGGACGTGGACGTGACGTCAGCTTGGCAGAGCTGACAAAGCGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS TCA 90 bp | CGTGCTGCAACAGGTTTTCCCGCAGGGATTTCACAAGATCCTCATTaGGCCATGGGTTTGGAACATGCGGATTATCCACTTCAGGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: RAATGFPAGISQDPH*AMGLEHADYPLQGL Trigger: CAGTCCCTGAAGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAAATCCCTGCGGGAAAACCTGTTGCAGCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CCA 90 bp | GTTTTCCCGCAGGGATTTCACAAGATCCTCATTGAGCCATGGGTTTaGAACATGCGGATTATCCACTTCAGGGACTGTAAGGGTGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VFPQGFHKILIEPWV*NMRIIHFRDCKGVR Trigger: CCGGACACCCTTACAGTCCCTGAAGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAAATCCCTGCGGGAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS-3UTR CAA 90 bp | GTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGCTGTGTCCAGCATCCTTTTGAACTaGTTGGAGGCCATCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: VCNFCGSSSSRGQIQAVSSILLN*LEAISL Trigger: CAGTGAGATGGCCTCCAACAAGTTCAAAAGGATGCT...GGACACAGCTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTACTGCCGGCCCTCCTCTaGGTCATCAGGTGCAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLLPALL*VIRCRG Trigger: TCCCCTGCACCTGATGACCAAGAGGAGGGCCGGCAG...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS CCA 90 bp | GTTCCGAGTCTGGAAAGAAGAGCAGCAGCAGGTCACCAAAGCTGTTaGCTTAATGTCTTGCCTCACTGCCAGCACTCCAGAGATTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VPSLERRAAAGHQSC*LNVLPHCQHSRDCI Trigger: AATACAATCTCTGGAGTGCTGGCAGTGAGGCAAGACATTAAGCCAACAGCTTTGGTGACCTGCTGCTGCTCTTCTTTCCAGACTCGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGTGTTGGCTTAATGTCTaGCCTCACTGCCAGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LENVTVFFLEQLKAHRQVCWLNV*PHCQHS Trigger: GGAGTGCTGGCAGTGAGGCAAGACATTAAGCCAACA...CACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
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| CDS GCA 90 bp | AGCTTGGGAGAAACGGATTTCCTCGCTGTCTTTGACTTTTCGTGCTaGAACAGGTTTTCCCGCAGGGATTTCACAAGATCCTCATTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLGETDFLAVFDFSC*NRFSRRDFTRSSLS Trigger: GCTCAATGAGGATCTTGTGAAATCCCTGCGGGAAAACCTGTTGCAGCACGAAAAGTCAAAGACAGCGAGGAAATCCGTTTCTCCCAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS GCA 90 bp | GAGAGCTTGGGAGAAACGGATTTCCTCGCTGTCTTTGACTTTTCGTaGTGCAACAGGTTTTCCCGCAGGGATTTCACAAGATCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: ESLGETDFLAVFDFS*CNRFSRRDFTRSSL Trigger: CAATGAGGATCTTGTGAAATCCCTGCGGGAAAACCTGTTGCAGCACGAAAAGTCAAAGACAGCGAGGAAATCCGTTTCTCCCAAGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CCA 90 bp | CAACAGGTTTTCCCGCAGGGATTTCACAAGATCCTCATTGAGCCATaGGTTTGGAACATGCGGATTATCCACTTCAGGGACTGTAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QQVFPQGFHKILIEP*VWNMRIIHFRDCKG Trigger: ACCCTTACAGTCCCTGAAGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAAATCCCTGCGGGAAAACCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS-3UTR CAA 90 bp | GAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGCTGTGCATCAACTTCTaGACCCCACTGATCTGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: ENVTVFFLEQLKAHRQVMLCINF*TPLICD Trigger: GTCGCAGATCAGTGGGGTCAAGAAGTTGATGCACAG...CATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR CAA 90 bp | GAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGATGACGTGGAGGCCCCACTaGTTCACATCTTCTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ENVTVFFLEQLKAHRQVMTWRPH*FTSSSS Trigger: GGAACTAGAAGATGTGAACAAGTGGGGCCTCCACGT...CATCACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAAAATGTCACAGTTTTCTTCCTGGAGCAACTTAAAGCCCACCGCCAAGTGGGTCCACATCATGTATaGCACTGGCAAAAATGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LENVTVFFLEQLKAHRQVGPHHV*HWQKWP Trigger: CGGCCATTTTTGCCAGTGCAATACATGATGTGGACC...CACTTGGCGGTGGGCTTTAAGTTGCTCCAGGAAGAAAACTGTGACATTTTCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS TCA 90 bp | TCTCCTCTGTGGCTTAATATCAATTGGCTTGTTGATGGCATAAGGTaGTCCGTGAACATAAGCGCTTCGGAATCTAGCCACCTTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPLWLNINWLVDGIR*SVNISASESSHLPQ Trigger: CTGGGGAAGGTGGCTAGATTCCGAAGCGCTTATGTTCACGGATCACCTTATGCCATCAACAAGCCAATTGATATTAAGCCACAGAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079975.11 |
||
| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGAAGGACTCCCGGCGTaGACTGTGGACAAAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLEGLPA*TVDKVC Trigger: GCAAACTTTGTCCACAGTCAACGCCGGGAGTCCTTC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
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| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATACTCCGACACCTGGTaGCCAGACCGACTCATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLYSDTW*PDRLIS Trigger: TGAGATGAGTCGGTCTGGCAACCAGGTGTCGGAGTA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGGAGGACGCCGGAGCTaGTCACCTTCTTGGTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLGGRRS*SPSWFQ Trigger: TTGAAACCAAGAAGGTGACAAGCTCCGGCGTCCTCC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGTGGACAAAGTTTGCTaGGAGAATCAGCCCAGACCC | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLVDKVC*ENQPRP Trigger: GGGTCTGGGCTGATTCTCCAAGCAAACTTTGTCCAC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTACTGTGCATCAACTTCTaGACCCCACTGATCTGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLLCINF*TPLICD Trigger: GTCGCAGATCAGTGGGGTCAAGAAGTTGATGCACAG...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAACGTGGAGGCCCCACTaGTTCACATCTTCTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLTWRPH*FTSSSS Trigger: GGAACTAGAAGATGTGAACAAGTGGGGCCTCCACGT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CAA 90 bp | AAAGGAAAATTAGCATGGGCTCCAAACCTTACACCAAGAAGACAACTAAGGTCTACGTGGAGGCCCCACTaGTTCACATCTTCTAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KGKLAWAPNLTPRRQLRSTWRPH*FTSSSS Trigger: GGAACTAGAAGATGTGAACAAGTGGGGCCTCCACGT...AGACCTTAGTTGTCTTCTTGGTGTAAGGTTTGGAGCCCATGCTAATTTTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGCTTCGCAAGTCTGCTaGTTCCAACTGTCTGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLASQVC*FQLSEG Trigger: GCCTTCAGACAGTTGGAACAAGCAGACTTGCGAAGC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122041.8 |
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| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGACTGTGGACAAAGTTaGCTTGGAGAATCAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLDCGQS*LGESAQ Trigger: CTGGGCTGATTCTCCAAGCAAACTTTGTCCACAGTC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
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| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGGTCCACATCATGTATaGCACTGGCAAAAATGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLGPHHV*HWQKWP Trigger: CGGCCATTTTTGCCAGTGCAATACATGATGTGGACC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATCTGTGATGGTGGCTTaGTTGATGGATGGTTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLSVMVA*LMDGWL Trigger: CAACCAACCATCCATCAACAAAGCCACCATCACAGA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
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| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAATCCTTTTGAACTTGTaGGAGGCCATCTCACTGACG | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLILLNL*EAISLT Trigger: CGTCAGTGAGATGGCCTCCAACAAGTTCAAAAGGAT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAAGCATCCTTTTGAACTaGTTGGAGGCCATCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLSILLN*LEAISL Trigger: CAGTGAGATGGCCTCCAACAAGTTCAAAAGGATGCT...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS GCA 90 bp | TCGAAACATATCCAGGAATGCCTTCTGAAAGGGAAGGTATTCACATaGATCATGTTCGCAGCTCTTCCGTCATTAATATTTTCCTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SKHIQECLLKGKVFT*IMFAALPSLIFSSS Trigger: AGACGAGGAAAATATTAATGACGGAAGAGCTGCGAACATGATGCATGTGAATACCTTCCCTTTCAGAAGGCATTCCTGGATATGTTTCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119507.8 |
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| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATTGATGGATGGTTGGTaGCACATGGGTGATCTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLLMDGW*HMGDLL Trigger: CAAAAGATCACCCATGTGCAACCAACCATCCATCAA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000074103.12 ENSMUST00000122041.8 |
||
| CDS-3UTR CAA 90 bp | GACAAGCTGATGGAGCAAGAAGAATCAATAGCAAAGTCCACATGTTACCAGACTTATCGAGAAATGTGTTaGAGATGTACTCCGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: DKLMEQEESIAKSTCYQTYREMC*RCTPTP Trigger: AGGTGTCGGAGTACATCTCAAACACATTTCTCGATA...AGTCTGGTAACATGTGGACTTTGCTATTGATTCTTCTTGCTCCATCAGCTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CAA 90 bp | TTAGAAAAGTATGCAATTTCTGTGGCTCATCCTCCTCCAGGGGACAGATCCAAGGATTTCCACTTCATGTaGCTTATCGAGAAATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LEKYAISVAHPPPGDRSKDFHFM*LIEKCV Trigger: AACACATTTCTCGATAAGCAACATGAAGTGGAAATC...CTTGGATCTGTCCCCTGGAGGAGGATGAGCCACAGAAATTGCATACTTTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTATATCGAGAAATGTGTTaGAGATGTACTCCGACACCT | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLYREMC*RCTPTP Trigger: AGGTGTCGGAGTACATCTCAAACACATTTCTCGATA...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
||
| CDS-3UTR CAA 90 bp | GGTGTGACCATGGTTGTGGCATGTGACATGCACTTTGGAAACAATATTTTTCTAGATTTCCACTTCATGTaGCTTATCGAGAAATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVTMVVACDMHFGNNIFLDFHFM*LIEKCV Trigger: AACACATTTCTCGATAAGCAACATGAAGTGGAAATC...TAGAAAAATATTGTTTCCAAAGTGCATGTCACATGCCACAACCATGGTCACACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074103.12 ENSMUST00000120664.8 ENSMUST00000122041.8 |
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| CDS TCA 72 bp | CGAGTAGCCGCGGTGCCGGACGCGGCTGGCCCCGCTTaGGGCGTAGCGACCACGGGTAGCTCCGGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RVAAVPDAAGPA*GVATTGSSGWW Trigger: CCACCACCCGGAGCTACCCGTGGTCGCTACGCCTCAAGCGGGGCCAGCCGCGTCCGGCACCGCGGCTACTCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
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| CDS GCA 72 bp | GGCCCGGCCGGTGACCTGTCTCCACCGCGTAGGAGGTaGGGTCCATGGCACGGCAGTACAGGTAGCGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GPAGDLSPPRRR*GPWHGSTGSAR Trigger: CCGAGCGCTACCTGTACTGCCGTGCCATGGACCGCACCTCCTACGCGGTGGAGACAGGTCACCGGCCGGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS CAA 72 bp | TTAGGGGCTTTGAGAGCGGCCCCGCCAGCGCTGTCATaGCCCTCTTCGCTGACCGCCCGGGCCGGCACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGALRAAPPALS*PSSLTARAGTL Trigger: CAGCGTGCCGGCCCGGGCGGTCAGCGAAGAGGGCAATGACAGCGCTGGCGGGGCCGCTCTCAAAGCCCCTAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS CAA 90 bp | CAGAGATGCTTAGGGGCTTTGAGAGCGGCCCCGCCAGCGCTGTCATaGCCCTCTTCGCTGACCGCCCGGGCCGGCACGCTGCTGCCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QRCLGALRAAPPALS*PSSLTARAGTLLPS Trigger: AGAGGGCAGCAGCGTGCCGGCCCGGGCGGTCAGCGAAGAGGGCAATGACAGCGCTGGCGGGGCCGCTCTCAAAGCCCCTAAGCATCTCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS GCA 72 bp | TCACGGGACCACCAGCGAGTTCAAAGGGGGCCATCCTaGCGTACCCCGCCATGCTCGGATGCCCGGTGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRDHQRVQRGPS*RTPPCSDARCP Trigger: CGGGCACCGGGCATCCGAGCATGGCGGGGTACGGCAGGATGGCCCCCTTTGAACTCGCTGGTGGTCCCGTGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS GCA 72 bp | CGAGTTCAAAGGGGGCCATCCTGCCGTACCCCGCCATaGTCGGATGCCCGGTGCCCGCACATGAGGGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RVQRGPSCRTPP*SDARCPHMRAA Trigger: AGCAGCCCTCATGTGCGGGCACCGGGCATCCGAGCATGGCGGGGTACGGCAGGATGGCCCCCTTTGAACTCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120664.8 |
||
| CDS GCA 72 bp | AGCGGGTACTGGTGGTGCTGCTCGTGCCTCCAGAGATaGTTAGGGGCTTTGAGAGCGGCCCCGCCAGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGYWWCCSCLQR*LGALRAAPPAL Trigger: CAGCGCTGGCGGGGCCGCTCTCAAAGCCCCTAAGCATCTCTGGAGGCACGAGCAGCACCACCAGTACCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS GCA 72 bp | AGGCGGAACTGGGGCTGCCGGAGCGGGTACTGGTGGTaGTGCTCGTGCCTCCAGAGATGCTTAGGGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRNWGCRSGYWW*CSCLQRCLGAL Trigger: CAAAGCCCCTAAGCATCTCTGGAGGCACGAGCAGCACCACCAGTACCCGCTCCGGCAGCCCCAGTTCCGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS CCA 72 bp | AAGAGGCGGAACTGGGGCTGCCGGAGCGGGTACTGGTaGTGCTGCTCGTGCCTCCAGAGATGCTTAGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KRRNWGCRSGYW*CCSCLQRCLGA Trigger: AGCCCCTAAGCATCTCTGGAGGCACGAGCAGCACCACCAGTACCCGCTCCGGCAGCCCCAGTTCCGCCTCTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS CCA 72 bp | GGTGACCTGTCTCCACCGCGTAGGAGGTGCGGTCCATaGCACGGCAGTACAGGTAGCGCTCGGTGTCCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: GDLSPPRRRCGP*HGSTGSARCPS Trigger: ACTCGGACACCGAGCGCTACCTGTACTGCCGTGCCATGGACCGCACCTCCTACGCGGTGGAGACAGGTCACC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS CAA 90 bp | GGGTACTGGTGGTGCTGCTCGTGCCTCCAGAGATGCTTAGGGGCTTaGAGAGCGGCCCCGCCAGCGCTGTCATTGCCCTCTTCGCTGACC | + |
|
Preference number: 6 (lower is better) Translates to: GYWWCCSCLQRCLGA*RAAPPALSLPSSLT Trigger: GGTCAGCGAAGAGGGCAATGACAGCGCTGGCGGGGCCGCTCTCAAAGCCCCTAAGCATCTCTGGAGGCACGAGCAGCACCACCAGTACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS GCA 72 bp | CGGAACTGGGGCTGCCGGAGCGGGTACTGGTGGTGCTaGTCGTGCCTCCAGAGATGCTTAGGGGCTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RNWGCRSGYWWC*SCLQRCLGALR Trigger: TCTCAAAGCCCCTAAGCATCTCTGGAGGCACGAGCAGCACCACCAGTACCCGCTCCGGCAGCCCCAGTTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS CCA 72 bp | TTGCTTGGAGAATCAGCCCAGACCCTGGGCTGGTCATaGGATCCAAGGGACTCCGTCCCGCTGATGTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LLGESAQTLGWS*DPRDSVPLMCH Trigger: ATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCAGGGTCTGGGCTGATTCTCCAAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000074103.12 ENSMUST00000079975.11 ENSMUST00000119507.8 ENSMUST00000120671.8 ENSMUST00000122041.8 ENSMUST00000135275.8 ENSMUST00000153234.8 ENSMUST00000177907.8 |
||
| CDS CAA 72 bp | GTATGTGCCACTGTGAAGCGGCGCTGTTTGGGGATGTaGCTACTCAGAAGCATCCTGCGCAGGAGCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VCATVKRRCLGM*LLRSILRRSLG Trigger: CCCCAGGCTCCTGCGCAGGATGCTTCTGAGTAGCAACATCCCCAAACAGCGCCGCTTCACAGTGGCACATAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CAA 90 bp | GGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTGATGTGCCATaGTCCACATCGAAACCACTTGAGTCTGCAGATGTGACGGCGATC | + |
|
Preference number: 6 (lower is better) Translates to: GLVMGSKGLRPADVP*STSKPLESADVTAI Trigger: GATCGCCGTCACATCTGCAGACTCAAGTGGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122041.8 ENSMUST00000177907.8 |
||
| CDS TCA 72 bp | TGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACGTCTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: WAGHGIQGTPSR*CAIVHIETSPL Trigger: CAGAGGAGACGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079975.11 |
||
| CDS TCA 72 bp | TGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACGTCTGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: WAGHGIQGTPSR*CAIVHIETSES Trigger: GGACTCAGACGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS CAA 90 bp | GGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTGATGTGCCATaGTCCACATCGAAACAAACTGCCTCCGTTGTCCTCAGGGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: GLVMGSKGLRPADVP*STSKQTASVVLREL Trigger: AAGTTCCCTGAGGACAACGGAGGCAGTTTGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074103.12 |
||
| CDS TCA 72 bp | TGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACAAACTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WAGHGIQGTPSR*CAIVHIETNCL Trigger: GAGGCAGTTTGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074103.12 |
||
| CDS GCA 72 bp | CAGGAAGGACTCCCGGCGTTGACTGTGGACAAAGTTTaGTTGGAGAATCAGCCCAGACCCTGGGCTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QEGLPALTVDKV*LENQPRPWAGH Trigger: ATGACCAGCCCAGGGTCTGGGCTGATTCTCCAAGCAAACTTTGTCCACAGTCAACGCCGGGAGTCCTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000074103.12 ENSMUST00000079975.11 ENSMUST00000119507.8 ENSMUST00000120671.8 ENSMUST00000122041.8 ENSMUST00000135275.8 ENSMUST00000153234.8 ENSMUST00000177907.8 |
||
| CDS GCA 72 bp | TGGTCATGGGATCCAAGGGACTCCGTCCCGCTGATGTaGCATTGTCCACATCGAAACGTCTCCTCTGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WSWDPRDSVPLM*HCPHRNVSSVA Trigger: AGCCACAGAGGAGACGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079975.11 |
||
| CDS GCA 72 bp | GGCGCTGTTTGGGGATGTTGCTACTCAGAAGCATCCTaGGCAGGAGCCTGGGGGAATTCCTGGGAGAAATCA | + |
|
Preference number: 6 (lower is better) Translates to: GAVWGCCYSEAS*AGAWGNSWEKS Trigger: TGATTTCTCCCAGGAATTCCCCCAGGCTCCTGCGCAGGATGCTTCTGAGTAGCAACATCCCCAAACAGCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CAA 72 bp | ACAGGAAGGACTCCCGGCGTTGACTGTGGACAAAGTTaGCTTGGAGAATCAGCCCAGACCCTGGGCTGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TGRTPGVDCGQS*LGESAQTLGWS Trigger: TGACCAGCCCAGGGTCTGGGCTGATTCTCCAAGCAAACTTTGTCCACAGTCAACGCCGGGAGTCCTTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000074103.12 ENSMUST00000079975.11 ENSMUST00000119507.8 ENSMUST00000120671.8 ENSMUST00000122041.8 ENSMUST00000135275.8 ENSMUST00000153234.8 ENSMUST00000177907.8 |
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| CDS CAA 90 bp | TCGAAACATGTATGTGCCACTGTGAAGCGGCGCTGTTTGGGGATGTaGCTACTCAGAAGCATCCTGCGCAGGAGCCTGGGGGAATTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SKHVCATVKRRCLGM*LLRSILRRSLGEFL Trigger: CAGGAATTCCCCCAGGCTCCTGCGCAGGATGCTTCTGAGTAGCAACATCCCCAAACAGCGCCGCTTCACAGTGGCACATACATGTTTCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CAA 90 bp | TTGTCCACATCGAAACATGTATGTGCCACTGTGAAGCGGCGCTGTTaGGGGATGTTGCTACTCAGAAGCATCCTGCGCAGGAGCCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSTSKHVCATVKRRC*GMLLLRSILRRSLG Trigger: CCCCAGGCTCCTGCGCAGGATGCTTCTGAGTAGCAACATCCCCAAACAGCGCCGCTTCACAGTGGCACATACATGTTTCGATGTGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS TCA 72 bp | TGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACATATCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WAGHGIQGTPSR*CAIVHIETYPG Trigger: TCCTGGATATGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119507.8 |
||
| CDS TCA 72 bp | TGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACTGTAGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: WAGHGIQGTPSR*CAIVHIETVGL Trigger: AAGTCCTACAGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135275.8 |
||
| CDS TCA 72 bp | TGGGCTGGTCATGGGATCCAAGGGACTCCGTCCCGCTaGTGTGCCATTGTCCACATCGAAACATGTATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: WAGHGIQGTPSR*CAIVHIETCMC Trigger: GCACATACATGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS GCA 72 bp | TGGTCATGGGATCCAAGGGACTCCGTCCCGCTGATGTaGCATTGTCCACATCGAAACAAACTGCCTCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: WSWDPRDSVPLM*HCPHRNKLPPL Trigger: CAACGGAGGCAGTTTGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074103.12 |
||
| CDS GCA 72 bp | TGGTCATGGGATCCAAGGGACTCCGTCCCGCTGATGTaGCATTGTCCACATCGAAACCACTTGAGTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WSWDPRDSVPLM*HCPHRNHLSLQ Trigger: CTGCAGACTCAAGTGGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122041.8 ENSMUST00000177907.8 |
||
| CDS CAA 72 bp | ATGGGATCCAAGGGACTCCGTCCCGCTGATGTGCCATaGTCCACATCGAAACAAACTGCCTCCGTTGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: MGSKGLRPADVP*STSKQTASVVL Trigger: GAGGACAACGGAGGCAGTTTGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000074103.12 |
||
| CDS CAA 72 bp | ATGGGATCCAAGGGACTCCGTCCCGCTGATGTGCCATaGTCCACATCGAAACGTCTGAGTCCCTGGAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: MGSKGLRPADVP*STSKRLSPWKD Trigger: GTCTTTCCAGGGACTCAGACGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS GCA 72 bp | TGGTCATGGGATCCAAGGGACTCCGTCCCGCTGATGTaGCATTGTCCACATCGAAACATATCCAGGAATGCC | + |
|
Preference number: 6 (lower is better) Translates to: WSWDPRDSVPLM*HCPHRNISRNA Trigger: GGCATTCCTGGATATGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119507.8 |
||
| CDS GCA 72 bp | TGGTCATGGGATCCAAGGGACTCCGTCCCGCTGATGTaGCATTGTCCACATCGAAACATGTATGTGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: WSWDPRDSVPLM*HCPHRNMYVPL Trigger: CAGTGGCACATACATGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CCA 72 bp | GCCTCCTCTGTGATGGTGGCTTTGTTGATGGATGGTTaGTTGCACATGGGTGATCTTTTGCTGGGTGCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: ASSVMVALLMDG*LHMGDLLLGAR Trigger: CCGAGCACCCAGCAAAAGATCACCCATGTGCAACCAACCATCCATCAACAAAGCCACCATCACAGAGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000074103.12 ENSMUST00000079975.11 ENSMUST00000119507.8 ENSMUST00000120671.8 ENSMUST00000122041.8 ENSMUST00000135275.8 ENSMUST00000153234.8 ENSMUST00000177907.8 |
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| CDS CAA 72 bp | ATGGGATCCAAGGGACTCCGTCCCGCTGATGTGCCATaGTCCACATCGAAACCACTTGAGTCTGCAGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: MGSKGLRPADVP*STSKPLESADV Trigger: CACATCTGCAGACTCAAGTGGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122041.8 ENSMUST00000177907.8 |
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| CDS CAA 72 bp | GGGAGAGCTTGGGAGAAACGGATTTCCTCGCTGTCTTaGACTTTTCGTGCTGCAACAGGTTTTCCCGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRAWEKRISSLS*TFRAATGFPAG Trigger: CCCTGCGGGAAAACCTGTTGCAGCACGAAAAGTCAAAGACAGCGAGGAAATCCGTTTCTCCCAAGCTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CAA 72 bp | TCGAAACATGTATGTGCCACTGTGAAGCGGCGCTGTTaGGGGATGTTGCTACTCAGAAGCATCCTGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SKHVCATVKRRC*GMLLLRSILRR Trigger: CCTGCGCAGGATGCTTCTGAGTAGCAACATCCCCAAACAGCGCCGCTTCACAGTGGCACATACATGTTTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
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| CDS GCA 72 bp | TGGTCATGGGATCCAAGGGACTCCGTCCCGCTGATGTaGCATTGTCCACATCGAAACTGTAGGACTTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WSWDPRDSVPLM*HCPHRNCRTLR Trigger: TCTCAAAGTCCTACAGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCATGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135275.8 |
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| CDS CCA 72 bp | GAAACGCAATCTTGTTCTAGTTCTTGGAGATGGTCCTaGCACTGCGACTCCCAGGGGATCCCAGACAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: ETQSCSSSWRWS*HCDSQGIPDKS Trigger: GCTTTTGTCTGGGATCCCCTGGGAGTCGCAGTGCCAGGACCATCTCCAAGAACTAGAACAAGATTGCGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135275.8 |
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| CDS CAA 72 bp | ATGGGATCCAAGGGACTCCGTCCCGCTGATGTGCCATaGTCCACATCGAAACGTCTCCTCTGTGGCTTAATA | + |
|
Preference number: 6 (lower is better) Translates to: MGSKGLRPADVP*STSKRLLCGLI Trigger: TATTAAGCCACAGAGGAGACGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079975.11 |
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| CDS CAA 72 bp | ATGGGATCCAAGGGACTCCGTCCCGCTGATGTGCCATaGTCCACATCGAAACATATCCAGGAATGCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: MGSKGLRPADVP*STSKHIQECLL Trigger: CAGAAGGCATTCCTGGATATGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119507.8 |
||
| CDS CAA 72 bp | CTGGGGGAATTCCTGGGAGAAATCACCGGGGAGAGCTaGGGAGAAACGGATTTCCTCGCTGTCTTTGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGEFLGEITGES*GETDFLAVFDF Trigger: AAAGTCAAAGACAGCGAGGAAATCCGTTTCTCCCAAGCTCTCCCCGGTGATTTCTCCCAGGAATTCCCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
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| CDS CAA 72 bp | ATGGGATCCAAGGGACTCCGTCCCGCTGATGTGCCATaGTCCACATCGAAACATGTATGTGCCACTGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MGSKGLRPADVP*STSKHVCATVK Trigger: CTTCACAGTGGCACATACATGTTTCGATGTGGACAATGGCACATCAGCGGGACGGAGTCCCTTGGATCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS TCA 72 bp | TTTCAAGGGGAGGCTAGTTGGCCGAGGGATGTTCTCTaGTTCGCTTCGCAAGTCTGCTTGTTCCAACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FQGEASWPRDVL*FASQVCLFQLS Trigger: AGACAGTTGGAACAAGCAGACTTGCGAAGCGAATCAGAGAACATCCCTCGGCCAACTAGCCTCCCCTTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000122041.8 ENSMUST00000177907.8 |
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| CDS GCA 72 bp | CAATCTTGTTCTAGTTCTTGGAGATGGTCCTGGCACTaGGACTCCCAGGGGATCCCAGACAAAAGCCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: QSCSSSWRWSWH*DSQGIPDKSHL Trigger: CAAATGGCTTTTGTCTGGGATCCCCTGGGAGTCGCAGTGCCAGGACCATCTCCAAGAACTAGAACAAGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135275.8 |
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| CDS CCA 72 bp | GATGTGCCATTGTCCACATCGAAACGTCTGAGTCCCTaGAAAGACGAGGGCCAGGACATCCTAGATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DVPLSTSKRLSP*KDEGQDILDFF Trigger: GAAGAAATCTAGGATGTCCTGGCCCTCGTCTTTCCAGGGACTCAGACGTTTCGATGTGGACAATGGCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120671.8 |
||
| CDS CCA 72 bp | TGGGGGAATTCCTGGGAGAAATCACCGGGGAGAGCTTaGGAGAAACGGATTTCCTCGCTGTCTTTGACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: WGNSWEKSPGRA*EKRISSLSLTF Trigger: AAAAGTCAAAGACAGCGAGGAAATCCGTTTCTCCCAAGCTCTCCCCGGTGATTTCTCCCAGGAATTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CAA 72 bp | TCCTCTGTGATGGTGGCTTTGTTGATGGATGGTTGGTaGCACATGGGTGATCTTTTGCTGGGTGCTCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSVMVALLMDGW*HMGDLLLGARS Trigger: AGACCGAGCACCCAGCAAAAGATCACCCATGTGCAACCAACCATCCATCAACAAAGCCACCATCACAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000074103.12 ENSMUST00000079975.11 ENSMUST00000119507.8 ENSMUST00000120671.8 ENSMUST00000122041.8 ENSMUST00000135275.8 ENSMUST00000153234.8 ENSMUST00000177907.8 |
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| CDS CAA 90 bp | TCGTGCTGCAACAGGTTTTCCCGCAGGGATTTCACAAGATCCTCATaGAGCCATGGGTTTGGAACATGCGGATTATCCACTTCAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SCCNRFSRRDFTRSS*SHGFGTCGLSTSGT Trigger: AGTCCCTGAAGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAAATCCCTGCGGGAAAACCTGTTGCAGCACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
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| CDS GCA 72 bp | CAGCAGCAGGTCACCAAAGCTGTTGGCTTAATGTCTTaGCTCACTGCCAGCACTCCAGAGATTGTATTGATC | + |
|
Preference number: 6 (lower is better) Translates to: QQQVTKAVGLMS*LTASTPEIVLI Trigger: GATCAATACAATCTCTGGAGTGCTGGCAGTGAGGCAAGACATTAAGCCAACAGCTTTGGTGACCTGCTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS CCA 72 bp | TTCCCGCAGGGATTTCACAAGATCCTCATTGAGCCATaGGTTTGGAACATGCGGATTATCCACTTCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FPQGFHKILIEP*VWNMRIIHFRD Trigger: GTCCCTGAAGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAAATCCCTGCGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CAA 72 bp | TCATTACAGGAGTGCAGTGTTTCCTCAGAGGCACTTTaGCTCCGAGAGAGTACATCACAAGTGTCCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLQECSVSSEAL*LRESTSQVSLS Trigger: GGAGAGGGACACTTGTGATGTACTCTCTCGGAGCAAAAGTGCCTCTGAGGAAACACTGCACTCCTGTAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000122041.8 ENSMUST00000177907.8 |
||
| CDS CAA 72 bp | GCAGCAGCAGGTCACCAAAGCTGTTGGCTTAATGTCTaGCCTCACTGCCAGCACTCCAGAGATTGTATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: AAAGHQSCWLNV*PHCQHSRDCID Trigger: ATCAATACAATCTCTGGAGTGCTGGCAGTGAGGCAAGACATTAAGCCAACAGCTTTGGTGACCTGCTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155459.2 |
||
| CDS GCA 72 bp | TTGCACATGGGTGATCTTTTGCTGGGTGCTCGGTCTTaGAAATTCGTTAACGCAGCAAAGTTGTTCCGTACG | + |
|
Preference number: 6 (lower is better) Translates to: LHMGDLLLGARS*KFVNAAKLFRT Trigger: CGTACGGAACAACTTTGCTGCGTTAACGAATTTGCAAGACCGAGCACCCAGCAAAAGATCACCCATGTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000074103.12 ENSMUST00000079975.11 ENSMUST00000119507.8 ENSMUST00000120671.8 ENSMUST00000122041.8 ENSMUST00000135275.8 ENSMUST00000153234.8 ENSMUST00000177907.8 |
||
| CDS GCA 72 bp | ATTCCACGAAAAGGGTCCTCTTCTTCATTACAGGAGTaGAGTGTTTCCTCAGAGGCACTTTTGCTCCGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IPRKGSSSSLQE*SVSSEALLLRE Trigger: CTCTCGGAGCAAAAGTGCCTCTGAGGAAACACTGCACTCCTGTAATGAAGAAGAGGACCCTTTTCGTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000122041.8 ENSMUST00000177907.8 |
||
| CDS GCA 72 bp | TTCACAAGATCCTCATTGAGCCATGGGTTTGGAACATaGGGATTATCCACTTCAGGGACTGTAAGGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FTRSSLSHGFGT*GLSTSGTVRVS Trigger: GGACACCCTTACAGTCCCTGAAGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS GCA 72 bp | GAAACGGATTTCCTCGCTGTCTTTGACTTTTCGTGCTaGAACAGGTTTTCCCGCAGGGATTTCACAAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: ETDFLAVFDFSC*NRFSRRDFTRS Trigger: GGATCTTGTGAAATCCCTGCGGGAAAACCTGTTGCAGCACGAAAAGTCAAAGACAGCGAGGAAATCCGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS GCA 72 bp | GGAGAAACGGATTTCCTCGCTGTCTTTGACTTTTCGTaGTGCAACAGGTTTTCCCGCAGGGATTTCACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GETDFLAVFDFS*CNRFSRRDFTR Trigger: TCTTGTGAAATCCCTGCGGGAAAACCTGTTGCAGCACGAAAAGTCAAAGACAGCGAGGAAATCCGTTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS TCA 72 bp | ACAGGTTTTCCCGCAGGGATTTCACAAGATCCTCATTaGGCCATGGGTTTGGAACATGCGGATTATCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: TGFPAGISQDPH*AMGLEHADYPL Trigger: AAGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAAATCCCTGCGGGAAAACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CCA 72 bp | CAGGGATTTCACAAGATCCTCATTGAGCCATGGGTTTaGAACATGCGGATTATCCACTTCAGGGACTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: QGFHKILIEPWV*NMRIIHFRDCK Trigger: CTTACAGTCCCTGAAGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAAATCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
||
| CDS CAA 72 bp | AACAGGTTTTCCCGCAGGGATTTCACAAGATCCTCATaGAGCCATGGGTTTGGAACATGCGGATTATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: NRFSRRDFTRSS*SHGFGTCGLST Trigger: AGTGGATAATCCGCATGTTCCAAACCCATGGCTCAATGAGGATCTTGTGAAATCCCTGCGGGAAAACCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153234.8 |
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| CDS TCA 72 bp | TGGCTTAATATCAATTGGCTTGTTGATGGCATAAGGTaGTCCGTGAACATAAGCGCTTCGGAATCTAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: WLNINWLVDGIR*SVNISASESSH Trigger: GTGGCTAGATTCCGAAGCGCTTATGTTCACGGATCACCTTATGCCATCAACAAGCCAATTGATATTAAGCCA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079975.11 |
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| CDS GCA 72 bp | GATGTGCCATTGTCCACATCGAAACATATCCAGGAATaGCTTCTGAAAGGGAAGGTATTCACATGCATCATG | + |
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Preference number: 6 (lower is better) Translates to: DVPLSTSKHIQE*LLKGKVFTCIM Trigger: CATGATGCATGTGAATACCTTCCCTTTCAGAAGGCATTCCTGGATATGTTTCGATGTGGACAATGGCACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119507.8 |
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| CDS GCA 72 bp | ATCCAGGAATGCCTTCTGAAAGGGAAGGTATTCACATaGATCATGTTCGCAGCTCTTCCGTCATTAATATTT | + |
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Preference number: 6 (lower is better) Translates to: IQECLLKGKVFT*IMFAALPSLIF Trigger: AAATATTAATGACGGAAGAGCTGCGAACATGATGCATGTGAATACCTTCCCTTTCAGAAGGCATTCCTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119507.8 |
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| CDS CAA 90 bp | ATGTTCGCAGCTCTTCCGTCATTAATATTTTCCTCGTCTCCTATGTaGCATGTAGTGATTTTCACAGATGAATCCCAACACTCTGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: MFAALPSLIFSSSPM*HVVIFTDESQHSGL Trigger: CAAACCAGAGTGTTGGGATTCATCTGTGAAAATCACTACATGCAACATAGGAGACGAGGAAAATATTAATGACGGAAGAGCTGCGAACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119507.8 |
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