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Pregenerated sensors for PDE4B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028525

Ensembl transcript IDs: ENSMUST00000030251.13, ENSMUST00000097949.11, ENSMUST00000097950.9, ENSMUST00000106901.2, ENSMUST00000106904.9, ENSMUST00000106907.9, ENSMUST00000106908.9, ENSMUST00000106911.8, ENSMUST00000172616.2, ENSMUST00000173119.8, ENSMUST00000174186.2

Found 647 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCTTGCAGGCTGACTCTGGAGACTGGAGCCTGACTAGCCGCTGGTaGCCTCTTGTTCGGCGCTCCATGAAGGTTCGTCAGCAGGGTGAA +
Preference number: 1 (lower is better)
Translates to: FLQADSGDWSLTSRW*PLVRRSMKVRQQGE
Trigger: TTCACCCTGCTGACGAACCTTCATGGAGCGCCGAACAAGAGGTCACCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGCCTGCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR CCA 90 bp CAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCACATCAAAGCATATCCAGGAGTGTCT +
Preference number: 1 (lower is better)
Translates to: QSRRRAGLRVQWAPT*RRAIFHIKAYPGVS
Trigger: AGACACTCCTGGATATGCTTTGATGTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR GCA 90 bp AGGGCAGGGGCAGATTCTGAAATGAGCCGAGCTGACTGGATTTGGTaGCGGGACTTCATGCTCCTGGATAAAGGGAGGTGTAGGGAGGTG +
Preference number: 1 (lower is better)
Translates to: RAGADSEMSRADWIW*RDFMLLDKGRCREV
Trigger: CACCTCCCTACACCTCCCTTTATCCAGGAGCATGAAGTCCCGGCACCAAATCCAGTCAGCTCGGCTCATTTCAGAATCTGCCCCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR CCA 90 bp GGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTaGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTA +
Preference number: 1 (lower is better)
Translates to: GLAFWLQTQVTGKAR*PLSCAGLGHGRLTL
Trigger: TAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR CCA 90 bp GGCATGAAGTACCAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGGGCCATTTTCCACATCAAAGCATAT +
Preference number: 1 (lower is better)
Translates to: GMKYQSRRRAGLRVQ*APTWRRAIFHIKAY
Trigger: ATATGCTTTGATGTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTGGTACTTCATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR GCA 90 bp GCGGGTCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTaGTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTA +
Preference number: 1 (lower is better)
Translates to: AGLRQACRQGKTAWN*YLLHGLAFWLQTQV
Trigger: TACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR GCA 90 bp AACTGGCCTCTACTACCACATACAGCTGCGGGTCTCCGCCAAGCTTaGAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGC +
Preference number: 1 (lower is better)
Translates to: NWPLLPHTAAGLRQA*RQGKTAWNCYLLHG
Trigger: GCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGCAGCTGTATGTGGTAGTAGAGGCCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR CCA 90 bp AACAGGGCAGGGGCAGATTCTGAAATGAGCCGAGCTGACTGGATTTaGTGCCGGGACTTCATGCTCCTGGATAAAGGGAGGTGTAGGGAG +
Preference number: 1 (lower is better)
Translates to: NRAGADSEMSRADWI*CRDFMLLDKGRCRE
Trigger: CTCCCTACACCTCCCTTTATCCAGGAGCATGAAGTCCCGGCACCAAATCCAGTCAGCTCGGCTCATTTCAGAATCTGCCCCTGCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR TCA 90 bp CTGGTGACCTCTTGTTCGGCGCTCCATGAAGGTTCGTCAGCAGGGTaGAGTTGTTTCTTACACTTCGCAAGCTGGCAAGAACCTGGGCAA +
Preference number: 1 (lower is better)
Translates to: LVTSCSALHEGSSAG*SCFLHFASWQEPGQ
Trigger: TTGCCCAGGTTCTTGCCAGCTTGCGAAGTGTAAGAAACAACTTCACCCTGCTGACGAACCTTCATGGAGCGCCGAACAAGAGGTCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR CCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTaGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTGGCCTTTGTCC +
Preference number: 1 (lower is better)
Translates to: GKTAWNCYLLHGLAF*LQTQVTGKARWPLS
Trigger: GGACAAAGGCCACCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR TCA 90 bp CCAGGTAGAGGTACCCACAGGCAGAAGGGCAGGGCTCACATGAAATaGAAAAGCAGGGAGCAGACAGATTGCACACAGGACTTAGTGTTG +
Preference number: 1 (lower is better)
Translates to: PGRGTHRQKGRAHMK*KSREQTDCTQDLVL
Trigger: CAACACTAAGTCCTGTGTGCAATCTGTCTGCTCCCTGCTTTTTCATTTCATGTGAGCCCTGCCCTTCTGCCTGTGGGTACCTCTACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR CCA 90 bp AAGAAAAACAGGGCAGGGGCAGATTCTGAAATGAGCCGAGCTGACTaGATTTGGTGCCGGGACTTCATGCTCCTGGATAAAGGGAGGTGT +
Preference number: 1 (lower is better)
Translates to: KKNRAGADSEMSRAD*IWCRDFMLLDKGRC
Trigger: ACACCTCCCTTTATCCAGGAGCATGAAGTCCCGGCACCAAATCCAGTCAGCTCGGCTCATTTCAGAATCTGCCCCTGCCCTGTTTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR GCA 90 bp GCATGGATTGCCACAGAGGAGTCCTGCACGTCCGGACACATTCACTaGCTTCTGATTGGCTCCTGGAGAAACGTCAGCAACAAGTATTTA +
Preference number: 1 (lower is better)
Translates to: AWIATEESCTSGHIH*LLIGSWRNVSNKYL
Trigger: TAAATACTTGTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTGAATGTGTCCGGACGTGCAGGACTCCTCTGTGGCAATCCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
3UTR GCA 90 bp CCTGAGTATAAGGACCTCACAGTGGATTACAATGGGGAGAGCAAATaGTTTAGTGGGCAAAGGACTCTGTCCTGGCTGCCCTCGAGGATT +
Preference number: 1 (lower is better)
Translates to: PEYKDLTVDYNGESK*FSGQRTLSWLPSRI
Trigger: AATCCTCGAGGGCAGCCAGGACAGAGTCCTTTGCCCACTAAAGCATTTGCTCTCCCCATTGTAATCCACTGTGAGGTCCTTATACTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR CCA 90 bp AGCTTTGTGTCCTCTGTTTTCAAGCCATTTAGCTTTGATGGGAACTaGCCTCTACTACCACATACAGCTGCGGGTCTCCGCCAAGCTTGC +
Preference number: 1 (lower is better)
Translates to: SFVSSVFKPFSFDGN*PLLPHTAAGLRQAC
Trigger: GCAAGCTTGGCGGAGACCCGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAGAGGACACAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR CCA 90 bp GCTCCTAGATGGAGAAGGGATGAGGAGAAATCTAGGCATGGGAGATaGAGAGTACAGGTGCTCATGTGTCCACCAAATCTGATGAGGTCT +
Preference number: 1 (lower is better)
Translates to: APRWRRDEEKSRHGR*RVQVLMCPPNLMRS
Trigger: AGACCTCATCAGATTTGGTGGACACATGAGCACCTGTACTCTCCATCTCCCATGCCTAGATTTCTCCTCATCCCTTCTCCATCTAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR TCA 90 bp AGAACTAGGGACTCAAGACAAGGAAAGGGCAGACCCTTGGAACAATaGCCATTCCTGTCCTTAACTGCTGATGGGGCTCCATGTTTCTCT +
Preference number: 1 (lower is better)
Translates to: RTRDSRQGKGRPLEQ*PFLSLTADGAPCFS
Trigger: AGAGAAACATGGAGCCCCATCAGCAGTTAAGGACAGGAATGGTCATTGTTCCAAGGGTCTGCCCTTTCCTTGTCTTGAGTCCCTAGTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR CCA 90 bp ATCGAATATGATAATCCTGTTTGCAAAACCAGCTCATCAAAGGGTTaGGCAGAACTAGGGACTCAAGACAAGGAAAGGGCAGACCCTTGG +
Preference number: 1 (lower is better)
Translates to: IEYDNPVCKTSSSKG*AELGTQDKERADPW
Trigger: CCAAGGGTCTGCCCTTTCCTTGTCTTGAGTCCCTAGTTCTGCCCAACCCTTTGATGAGCTGGTTTTGCAAACAGGATTATCATATTCGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR GCA 90 bp CATGTGTCCACCAAATCTGATGAGGTCTTAGATAACTGGAAACTTTaGTTAATACCTCACTTGAGAGCCCATGCGTGGAGAAAGCAAAGG +
Preference number: 1 (lower is better)
Translates to: HVSTKSDEVLDNWKL*LIPHLRAHAWRKQR
Trigger: CCTTTGCTTTCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGCAAAGTTTCCAGTTATCTAAGACCTCATCAGATTTGGTGGACACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR CCA 90 bp CTGCTCGTGAGCAGTATGGAGACTAGCTCTTCCAAGTCAGTAGTTTaGGGATACTCAGTATCATCTGTGATCAAATGTAGTGTTGTTTAT +
Preference number: 1 (lower is better)
Translates to: LLVSSMETSSSKSVV*GYSVSSVIKCSVVY
Trigger: ATAAACAACACTACATTTGATCACAGATGATACTGAGTATCCCCAAACTACTGACTTGGAAGAGCTAGTCTCCATACTGCTCACGAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR GCA 90 bp CACCTGGAACAATGCAGTGTTACAGACGTACGAACCCATTGGTCATaGACATTTTGTGCCATTTTCTTTAACTATTGTCACAATGCTGAA +
Preference number: 1 (lower is better)
Translates to: HLEQCSVTDVRTHWS*TFCAIFFNYCHNAE
Trigger: TTCAGCATTGTGACAATAGTTAAAGAAAATGGCACAAAATGTGCATGACCAATGGGTTCGTACGTCTGTAACACTGCATTGTTCCAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR GCA 90 bp AAACTTCAGTATAAACCATTTAGTATCGAATATGATAATCCTGTTTaGAAAACCAGCTCATCAAAGGGTTGGGCAGAACTAGGGACTCAA +
Preference number: 1 (lower is better)
Translates to: KLQYKPFSIEYDNPV*KTSSSKGWAELGTQ
Trigger: TTGAGTCCCTAGTTCTGCCCAACCCTTTGATGAGCTGGTTTTGCAAACAGGATTATCATATTCGATACTAAATGGTTTATACTGAAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR CCA 90 bp GATAACTGGAAACTTTGCTTAATACCTCACTTGAGAGCCCATGCGTaGAGAAAGCAAAGGAATGATACATATGATGGAATTAAATGTATC +
Preference number: 1 (lower is better)
Translates to: DNWKLCLIPHLRAHA*RKQRNDTYDGIKCI
Trigger: GATACATTTAATTCCATCATATGTATCATTCCTTTGCTTTCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGCAAAGTTTCCAGTTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR TCA 90 bp TGGCTTCCTCTAATTCTAAATGTTAAAAGCCTATGCGCCAAAGACTaGGGTACTATAAAAAGGGTGACATTTATATATAACCATCAGCTG +
Preference number: 1 (lower is better)
Translates to: WLPLILNVKSLCAKD*GTIKRVTFIYNHQL
Trigger: CAGCTGATGGTTATATATAAATGTCACCCTTTTTATAGTACCTCAGTCTTTGGCGCATAGGCTTTTAACATTTAGAATTAGAGGAAGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR TCA 90 bp TTATTGACAGCTCATGCTTTAAGTGTGACATTATATTCACTTCTTTaGATAGTTTTCCCTGGACAATGTTCTCTGAGAATCCTTATGGAC +
Preference number: 1 (lower is better)
Translates to: LLTAHALSVTLYSLL*IVFPGQCSLRILMD
Trigger: GTCCATAAGGATTCTCAGAGAACATTGTCCAGGGAAAACTATTCAAAGAAGTGAATATAATGTCACACTTAAAGCATGAGCTGTCAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR CAA 90 bp CCCAGGAAAGGCGGCATGAAGTACCAGTCCCGACGAAGAGCCGGCTaGAGGGTCCAGTGGGCTCCGACCTGGAGAAGGGCCATTTTCCAC +
Preference number: 2 (lower is better)
Translates to: PRKGGMKYQSRRRAG*RVQWAPTWRRAIFH
Trigger: GTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTGGTACTTCATGCCGCCTTTCCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR-3UTR CCA 90 bp TGGGCAAAGGACTCTGTCCTGGCTGCCCTCGAGGATTATGTGGCCTGGGAGGGGGCTGACTCTGGAGACTaGAGCCTGACTAGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: WAKDSVLAALEDYVAWEGADSGD*SLTSRW
Trigger: CCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGC...CCCCTCCCAGGCCACATAATCCTCGAGGGCAGCCAGGACAGAGTCCTTTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR CCA 90 bp CCTGCGCTGGCTGTGCCCAGGAAAGGCGGCATGAAGTACCAGTCCCGACGAAGACAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCAC +
Preference number: 2 (lower is better)
Translates to: PALAVPRKGGMKYQSRRRQWAPT*RRAIFH
Trigger: GTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTG...TCTTCGTCGGGACTGGTACTTCATGCCGCCTTTCCTGGGCACAGCCAGCGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR-3UTR CCA 90 bp CCTGCGCTGGCTGTGCCCAGGAAAGGCGGCATGAAGTACCAGTCCCGACGAAGATCCAGGAGTGTCTCCTaGGAGGAGGCAAGTCGTTCA +
Preference number: 2 (lower is better)
Translates to: PALAVPRKGGMKYQSRRRSRSVS*EEASRS
Trigger: TGAACGACTTGCCTCCTCCCAGGAGACACTCCTGGA...TCTTCGTCGGGACTGGTACTTCATGCCGCCTTTCCTGGGCACAGCCAGCGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR-3UTR GCA 90 bp TGCGCTGGCTGTGCCCAGGAAAGGCGGCATGAAGTACCAGTCCCGACGAAGAGCCTTAGCTCATCTCCGTaGGTTTCTCTGTGTTCTCGC +
Preference number: 2 (lower is better)
Translates to: CAGCAQERRHEVPVPTKSLSSSP*VSLCSR
Trigger: GCGAGAACACAGAGAAACGCACGGAGATGAGCTAAG...GCTCTTCGTCGGGACTGGTACTTCATGCCGCCTTTCCTGGGCACAGCCAGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR CAA 90 bp GCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTGGCCTTaGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTC +
Preference number: 2 (lower is better)
Translates to: AFWLQTQVTGKARWP*SCAGLGHGRLTLPL
Trigger: GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR CAA 90 bp GAACTGGCCTCTACTACCACATACAGCTGCGGGTCTCCGCCAAGCTaGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGG +
Preference number: 2 (lower is better)
Translates to: ELASTTTYSCGSPPS*QARQDSMELLFASR
Trigger: CCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGCAGCTGTATGTGGTAGTAGAGGCCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTaGAATGTTCATCTCCACACA +
Preference number: 2 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGHARQG*NVHLHT
Trigger: TGTGTGGAGATGAACATTCCACCCTTGACGAGCATG...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp AAGGGCCATTTTCCACATCAAAGCATATCCAGGAGTGTCTCCTGGGAGGAGGCAGCTGACTCTGGAGACTaGAGCCTGACTAGCCGCTGG +
Preference number: 2 (lower is better)
Translates to: KGHFPHQSISRSVSWEEAADSGD*SLTSRW
Trigger: CCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGC...TGCCTCCTCCCAGGAGACACTCCTGGATATGCTTTGATGTGGAAAATGGCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR-3UTR CCA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCCATGCTCGTCAAGGGTaGAATGTTCATCTCCACACA +
Preference number: 2 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLHARQG*NVHLHT
Trigger: TGTGTGGAGATGAACATTCCACCCTTGACGAGCATG...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR CAA 90 bp CTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTaGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGA +
Preference number: 2 (lower is better)
Translates to: LRQACRQGKTAWNCY*LHGLAFWLQTQVTG
Trigger: TCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR GCA 90 bp CCTGATTCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGATCCGGACACATTCACTaGCTTCTGATTGGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: PDSHVTTGLRVSLQGMDRSGHIH*LLIGSW
Trigger: CCAGGAGCCAATCAGAAGGCAGTGAATGTGTCCGGA...TCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGAATCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
3UTR-3UTR GCA 90 bp GGTGGACAAGAAATGGTGAATGGGACAGGAAAGGACGGCCTGAGTATAAGGACCGGTGCCGGGACTTCATaGTCCTGGATAAAGGGAGGT +
Preference number: 2 (lower is better)
Translates to: GGQEMVNGTGKDGLSIRTGAGTS*SWIKGG
Trigger: ACCTCCCTTTATCCAGGAGCATGAAGTCCCGGCACC...GGTCCTTATACTCAGGCCGTCCTTTCCTGTCCCATTCACCATTTCTTGTCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR CCA 90 bp GCGGGTCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCATGCTCGTCAAGGGTaGAATGTTCATCTCCACACA +
Preference number: 2 (lower is better)
Translates to: AGLRQACRQGKTAWNCYLHARQG*NVHLHT
Trigger: TGTGTGGAGATGAACATTCCACCCTTGACGAGCATG...CAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp AATGACTCATCATCTGTAAGAAAGGCCACTGAAATTGCTAGGGCCTTGAGGAGTAGGTGTAGGGAGGTGTaGGGAGGAGGAAAGCCGGGG +
Preference number: 2 (lower is better)
Translates to: NDSSSVRKATEIARALRSRCREV*GGGKPG
Trigger: CCCCGGCTTTCCTCCTCCCCACACCTCCCTACACCT...ACTCCTCAAGGCCCTAGCAATTTCAGTGGCCTTTCTTACAGATGATGAGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR TCA 90 bp GATTCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTACATTCACTGCCTTCTaGTTGGCTCCTGGAGAAACG +
Preference number: 2 (lower is better)
Translates to: DSHVTTGLRVSLQGMDRTTFTAF*LAPGET
Trigger: CGTTTCTCCAGGAGCCAATCAGAAGGCAGTGAATGT...AGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
3UTR-3UTR TCA 90 bp GGACAAGAAATGGTGAATGGGACAGGAAAGGACGGCCTGAGTATAAGGACCTCAAGGGCAGGGCTCACATaGAATGAAAAAGCAGGGAGC +
Preference number: 2 (lower is better)
Translates to: GQEMVNGTGKDGLSIRTSRAGLT*NEKAGS
Trigger: GCTCCCTGCTTTTTCATTTCATGTGAGCCCTGCCCT...TGAGGTCCTTATACTCAGGCCGTCCTTTCCTGTCCCATTCACCATTTCTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR GCA 90 bp TCCTCTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATGGTCTCCGCCAAGCTTaGAGGCAAGGCAAGACAGCA +
Preference number: 2 (lower is better)
Translates to: SSVFKPFSFDGNWPLLPHGLRQA*RQGKTA
Trigger: TGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACC...ATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR GCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGGGTCTCCGCCAAGCTTaGAGGCAAGGCAAGACAGCA +
Preference number: 2 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQGLRQA*RQGKTA
Trigger: TGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACC...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGACTGGAAAGGCCAGGTaGCCTTTGTCCTGTGCAGGC +
Preference number: 2 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQTGKAR*PLSCAG
Trigger: GCCTGCACAGGACAAAGGCCACCTGGCCTTTCCAGT...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACCAAACTCAAGTAACTaGAAAGGCCAGGTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: SPPSLQARQDSMELLFASPNSSN*KGQVAF
Trigger: AAAGGCCACCTGGCCTTTCCAGTTACTTGAGTTTGG...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp AATGACTCATCATCTGTAAGAAAGGCCACTGAAATTGCTAGGGCCTTGAGGAGTGAGGATTATGTGGCCTaGGAGGGGCACAGAAAGGAG +
Preference number: 2 (lower is better)
Translates to: NDSSSVRKATEIARALRSEDYVA*EGHRKE
Trigger: CTCCTTTCTGTGCCCCTCCCAGGCCACATAATCCTC...ACTCCTCAAGGCCCTAGCAATTTCAGTGGCCTTTCTTACAGATGATGAGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR CCA 90 bp CCAGCCCTCTTCTTACACTGTGACTCTCATGACTCCCATACTGCACCTTTCCTTACAAGAAATGGTGAATaGGACAGGAAAGGACGGCCT +
Preference number: 2 (lower is better)
Translates to: PALFLHCDSHDSHTAPFLTRNGE*DRKGRP
Trigger: AGGCCGTCCTTTCCTGTCCCATTCACCATTTCTTGT...AAGGAAAGGTGCAGTATGGGAGTCATGAGAGTCACAGTGTAAGAAGAGGGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR GCA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGCATGGAACTGCTATTTaGTTCACGGCCTGGCATTCT +
Preference number: 2 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAAHGTAI*FTAWHS
Trigger: AGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATG...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR GCA 90 bp ATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGGGTCTCCGCCAAGCTTaGAGGCAAGGCAAGACAGCA +
Preference number: 2 (lower is better)
Translates to: MGWVVRFIDEVVSEFSHLGLRQA*RQGKTA
Trigger: TGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACC...CAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp AATGACTCATCATCTGTAAGAAAGGCCACTGAAATTGCTAGGGCCTTGAGGAGTCAAAGGACTCTGTCCTaGCTGCCCTCGAGGATTATG +
Preference number: 2 (lower is better)
Translates to: NDSSSVRKATEIARALRSQRTLS*LPSRIM
Trigger: CATAATCCTCGAGGGCAGCCAGGACAGAGTCCTTTG...ACTCCTCAAGGCCCTAGCAATTTCAGTGGCCTTTCTTACAGATGATGAGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR CCA 90 bp TTGTTAGTGAGTTCAGTCATCTGTCAGGACAGCTTCCCAACACCTAGTGCAGAGCAAGGCAAGACAGCATaGAACTGCTATTTGCTTCAC +
Preference number: 2 (lower is better)
Translates to: LLVSSVICQDSFPTPSAEQGKTA*NCYLLH
Trigger: GTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTG...CTCTGCACTAGGTGTTGGGAAGCTGTCCTGACAGATGACTGAACTCACTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp GACAACTGGGTCACTAAGAAGTTGACAAACTGGACCAAGAGGACAGCTGTTTATTCTAGGCATGGGAGATaGAGAGTACAGGTGCTCATG +
Preference number: 2 (lower is better)
Translates to: DNWVTKKLTNWTKRTAVYSRHGR*RVQVLM
Trigger: CATGAGCACCTGTACTCTCCATCTCCCATGCCTAGA...ATAAACAGCTGTCCTCTTGGTCCAGTTTGTCAACTTCTTAGTGACCCAGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR-3UTR TCA 90 bp AGAAAGGACAACTGGGTCACTAAGAAGTTGACAAACTGGACCAAGAGGACAGCTTGCTTGATTAAGGATTaGAACAGATGTGTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: RKDNWVTKKLTNWTKRTACLIKD*NRCVGS
Trigger: GCTCCCCACACATCTGTTTCAATCCTTAATCAAGCA...AGCTGTCCTCTTGGTCCAGTTTGTCAACTTCTTAGTGACCCAGTTGTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR-3UTR TCA 90 bp AATGACTCATCATCTGTAAGAAAGGCCACTGAAATTGCTAGGGCCTTGAGGAGTGGGCAATTGGAACAGTaGGCATATTTAAGGGGCTCT +
Preference number: 2 (lower is better)
Translates to: NDSSSVRKATEIARALRSGQLEQ*AYLRGS
Trigger: AGAGCCCCTTAAATATGCTCACTGTTCCAATTGCCC...ACTCCTCAAGGCCCTAGCAATTTCAGTGGCCTTTCTTACAGATGATGAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR TCA 90 bp AATGACTCATCATCTGTAAGAAAGGCCACTGAAATTGCTAGGGCCTTGAGGAGTAGGGCTCACATGAAATaGAAAAGCAGGGAGCAGACA +
Preference number: 2 (lower is better)
Translates to: NDSSSVRKATEIARALRSRAHMK*KSREQT
Trigger: TGTCTGCTCCCTGCTTTTTCATTTCATGTGAGCCCT...ACTCCTCAAGGCCCTAGCAATTTCAGTGGCCTTTCTTACAGATGATGAGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR GCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCATGGAACTGCTATTTaGTTCACGGCCTGGCATTCT +
Preference number: 2 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQHGTAI*FTAWHS
Trigger: AGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATG...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp ATTGTCTTCTTGTTGCCTTTGATGAATTTGAACATGGCTCCACTGCTCGTGAGCCCAAACTCAAGTAACTaGAAAGGCCAGGTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: IVFLLPLMNLNMAPLLVSPNSSN*KGQVAF
Trigger: AAAGGCCACCTGGCCTTTCCAGTTACTTGAGTTTGG...GCTCACGAGCAGTGGAGCCATGTTCAAATTCATCAAAGGCAACAAGAAGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR-3UTR CCA 90 bp ATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGCACGGCCTGGCATTCTaGCTCCAAACTCAAGTAACT +
Preference number: 2 (lower is better)
Translates to: MGWVVRFIDEVVSEFSHLHGLAF*LQTQVT
Trigger: AGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTG...CAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CCA 90 bp CATAGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCTTGAGAGCCCATGCGTaGAGAAAGCAAAGGAATGAT +
Preference number: 2 (lower is better)
Translates to: HRMFSRAHELNSSVDEDILRAHA*RKQRND
Trigger: ATCATTCCTTTGCTTTCTCCACGCATGGGCTCTCAA...GATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR CAA 90 bp GAAGTTGACAAACTGGACCAAGAGGACAGCTGTTTATGTATTTGTTaGTTTGCTTGCCTTGCCTTACACTGGGAAGATACTTTGGCCACA +
Preference number: 2 (lower is better)
Translates to: EVDKLDQEDSCLCIC*FACLALHWEDTLAT
Trigger: TGTGGCCAAAGTATCTTCCCAGTGTAAGGCAAGGCAAGCAAACAAACAAATACATAAACAGCTGTCCTCTTGGTCCAGTTTGTCAACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR-3UTR CCA 90 bp TGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGTCAGGACATGCTCGTCAAGGGTaGAATGTTCATCTCCACACA +
Preference number: 2 (lower is better)
Translates to: WVVRFIDEVVSEFSHLSGHARQG*NVHLHT
Trigger: TGTGTGGAGATGAACATTCCACCCTTGACGAGCATG...TCCTGACAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR CAA 90 bp TCTACGATAAAAATTCACATTGTCTTCTTGTTGCCTTTGATGAATTaGAACATGGCTCCACTGCTCGTGAGCAGTATGGAGACTAGCTCT +
Preference number: 2 (lower is better)
Translates to: STIKIHIVFLLPLMN*NMAPLLVSSMETSS
Trigger: AGAGCTAGTCTCCATACTGCTCACGAGCAGTGGAGCCATGTTCAAATTCATCAAAGGCAACAAGAAGACAATGTGAATTTTTATCGTAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR CAA 90 bp CTGACACCAGGAAGAGGCCTGACAAGTGTTATCAGAAGCTTCACATaGCGTCATTTACGACATCAGTTCACATTCTACGATAAAAATTCA +
Preference number: 2 (lower is better)
Translates to: LTPGRGLTSVIRSFT*RHLRHQFTFYDKNS
Trigger: TGAATTTTTATCGTAGAATGTGAACTGATGTCGTAAATGACGCAATGTGAAGCTTCTGATAACACTTGTCAGGCCTCTTCCTGGTGTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR-3UTR GCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATTCCTTATGGACATCTTaGAGGTACTCAAGGGCTGTG +
Preference number: 2 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDSLWTS*RYSRAV
Trigger: CACAGCCCTTGAGTACCTGCAAGATGTCCATAAGGA...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR CAA 90 bp TCTGATGAGGTCTTAGATAACTGGAAACTTTGCTTAATACCTCACTaGAGAGCCCATGCGTGGAGAAAGCAAAGGAATGATACATATGAT +
Preference number: 2 (lower is better)
Translates to: SDEVLDNWKLCLIPH*RAHAWRKQRNDTYD
Trigger: ATCATATGTATCATTCCTTTGCTTTCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGCAAAGTTTCCAGTTATCTAAGACCTCATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR-3UTR TCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATCTGGACAATGTTCTCTaGGAATCCTTATGGACATCT +
Preference number: 2 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDLDNVL*ESLWTS
Trigger: AGATGTCCATAAGGATTCTCAGAGAACATTGTCCAG...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR-3UTR CCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATCTCAAGGGCTGTGGTTaGATGTTAGTTCAATGTTTC +
Preference number: 2 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDLKGCG*MLVQCF
Trigger: GAAACATTGAACTAACATCCAACCACAGCCCTTGAG...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR-3UTR GCA 90 bp TGTGCCATTTTCTTTAACTATTGTCACAATGCTGAACTGAAGCATGACACGTATTATGATAATCCTGTTTaGAAAACCAGCTCATCAAAG +
Preference number: 2 (lower is better)
Translates to: CAIFFNYCHNAELKHDTYYDNPV*KTSSSK
Trigger: CTTTGATGAGCTGGTTTTGCAAACAGGATTATCATA...ATACGTGTCATGCTTCAGTTCAGCATTGTGACAATAGTTAAAGAAAATGGCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR-3UTR CCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATTTGAATAGTTTTCCCTaGACAATGTTCTCTGAGAAT +
Preference number: 2 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDLNSFP*TMFSEN
Trigger: ATTCTCAGAGAACATTGTCCAGGGAAAACTATTCAA...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR TCA 72 bp GGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTaGCCCTACCACTCAGCGGGCATGCTCGTCAAGGGT +
Preference number: 3 (lower is better)
Translates to: GLCPVQALAMVG*PYHSAGMLVKG
Trigger: ACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR TCA 72 bp GCTGACTCTGGAGACTGGAGCCTGACTAGCCGCTGGTaGCCTCTTGTTCGGCGCTCCATGAAGGTTCGTCAG +
Preference number: 3 (lower is better)
Translates to: ADSGDWSLTSRW*PLVRRSMKVRQ
Trigger: CTGACGAACCTTCATGGAGCGCCGAACAAGAGGTCACCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000173119.8
ENSMUST00000174186.2
3UTR TCA 72 bp GCTGATTCTTGCAGGCTGACTCTGGAGACTGGAGCCTaGCTAGCCGCTGGTGACCTCTTGTTCGGCGCTCCA +
Preference number: 3 (lower is better)
Translates to: ADSCRLTLETGA*LAAGDLLFGAP
Trigger: TGGAGCGCCGAACAAGAGGTCACCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGCCTGCAAGAATCAGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR TCA 72 bp TCCTGGGAGGAGGCAAGTCGTTCACGTGCAACATCCTaGACCGGTACCCTGTCAGCCCACCGCTCAGCAACT +
Preference number: 3 (lower is better)
Translates to: SWEEASRSRATS*TGTLSAHRSAT
Trigger: AGTTGCTGAGCGGTGGGCTGACAGGGTACCGGTTCAGGATGTTGCACGTGAACGACTTGCCTCCTCCCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR-3UTR CAA 90 bp TCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGAAGGCCAGGTGGCCTTaGTCCTGTGCAGGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: SAKLAGKARQHGTAICFTKARWP*SCAGLG
Trigger: GCCAAGGCCTGCACAGGACAAAGGCCACCTGGCCTT...CGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR GCA 72 bp GCAAATGCTTTAGTGGGCAAAGGACTCTGTCCTGGCTaGCCTCGAGGATTATGTGGCCTGGGAGGGGCACAG +
Preference number: 3 (lower is better)
Translates to: ANALVGKGLCPG*PRGLCGLGGAQ
Trigger: CTGTGCCCCTCCCAGGCCACATAATCCTCGAGGGCAGCCAGGACAGAGTCCTTTGCCCACTAAAGCATTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR CCA 72 bp GAGAGCAAATGCTTTAGTGGGCAAAGGACTCTGTCCTaGCTGCCCTCGAGGATTATGTGGCCTGGGAGGGGC +
Preference number: 3 (lower is better)
Translates to: ESKCFSGQRTLS*LPSRIMWPGRG
Trigger: GCCCCTCCCAGGCCACATAATCCTCGAGGGCAGCCAGGACAGAGTCCTTTGCCCACTAAAGCATTTGCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR GCA 72 bp GCCACAGAGGAGTCCTGCACGTCCGGACACATTCACTaGCTTCTGATTGGCTCCTGGAGAAACGTCAGCAAC +
Preference number: 3 (lower is better)
Translates to: ATEESCTSGHIH*LLIGSWRNVSN
Trigger: GTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTGAATGTGTCCGGACGTGCAGGACTCCTCTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
3UTR CCA 72 bp CAAAGGACTCTGTCCTGGCTGCCCTCGAGGATTATGTaGCCTGGGAGGGGCACAGAAAGGAGCACAGAACAT +
Preference number: 3 (lower is better)
Translates to: QRTLSWLPSRIM*PGRGTERSTEH
Trigger: ATGTTCTGTGCTCCTTTCTGTGCCCCTCCCAGGCCACATAATCCTCGAGGGCAGCCAGGACAGAGTCCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR CAA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAAAGGCCAGGTGGCCTTaGTCCTGTGCAGGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQKARWP*SCAGLG
Trigger: GCCAAGGCCTGCACAGGACAAAGGCCACCTGGCCTT...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR TCA 72 bp CTGGGGGCTGGATGCAGCCATACACACGGCCTTGTGTaGCTGAGCACTTCTAGACTGATGGGAAACATCAGC +
Preference number: 3 (lower is better)
Translates to: LGAGCSHTHGLV*LSTSRLMGNIS
Trigger: GCTGATGTTTCCCATCAGTCTAGAAGTGCTCAGTCACACAAGGCCGTGTGTATGGCTGCATCCAGCCCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR CCA 72 bp TTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTaGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGG +
Preference number: 3 (lower is better)
Translates to: FWLQTQVTGKAR*PLSCAGLGHGR
Trigger: CCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR-3UTR CAA 90 bp GCTTCCCAACACCTAGTGCAGAGCAATCTCTCAGCTTTGTGTCCTCTGTTTTCAAAGGCCAGGTGGCCTTaGTCCTGTGCAGGCCTTGGC +
Preference number: 3 (lower is better)
Translates to: ASQHLVQSNLSALCPLFSKARWP*SCAGLG
Trigger: GCCAAGGCCTGCACAGGACAAAGGCCACCTGGCCTT...TGAAAACAGAGGACACAAAGCTGAGAGATTGCTCTGCACTAGGTGTTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR TCA 72 bp GGTACCCACAGGCAGAAGGGCAGGGCTCACATGAAATaGAAAAGCAGGGAGCAGACAGATTGCACACAGGAC +
Preference number: 3 (lower is better)
Translates to: GTHRQKGRAHMK*KSREQTDCTQD
Trigger: GTCCTGTGTGCAATCTGTCTGCTCCCTGCTTTTTCATTTCATGTGAGCCCTGCCCTTCTGCCTGTGGGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR TCA 72 bp CACTTCGCAAGCTGGCAAGAACCTGGGCAAAAGGAGTaGCAATCAGGTCATCGCCGTGTTGCTCACTGGGAA +
Preference number: 3 (lower is better)
Translates to: HFASWQEPGQKE*QSGHRRVAHWE
Trigger: TTCCCAGTGAGCAACACGGCGATGACCTGATTGTCACTCCTTTTGCCCAGGTTCTTGCCAGCTTGCGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR GCA 72 bp CTACTACCACATACAGCTGCGGGTCTCCGCCAAGCTTaGAGGCAAGGCAAGACAGCATGGAACTGCTATTTG +
Preference number: 3 (lower is better)
Translates to: LLPHTAAGLRQA*RQGKTAWNCYL
Trigger: CAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGCAGCTGTATGTGGTAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR TCA 72 bp ACCAGTGGAAAGATGCCCAGACAACGTGACATGGCCTaGTTCCCATGTAACCACAGGGTTGAGGGTGAGTCT +
Preference number: 3 (lower is better)
Translates to: TSGKMPRQRDMA*FPCNHRVEGES
Trigger: AGACTCACCCTCAACCCTGTGGTTACATGGGAATCAGGCCATGTCACGTTGTCTGGGCATCTTTCCACTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
3UTR TCA 72 bp GTAGAGGTACCCACAGGCAGAAGGGCAGGGCTCACATaGAATGAAAAAGCAGGGAGCAGACAGATTGCACAC +
Preference number: 3 (lower is better)
Translates to: VEVPTGRRAGLT*NEKAGSRQIAH
Trigger: GTGTGCAATCTGTCTGCTCCCTGCTTTTTCATTTCATGTGAGCCCTGCCCTTCTGCCTGTGGGTACCTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR GCA 72 bp AAGGACCTCACAGTGGATTACAATGGGGAGAGCAAATaGTTTAGTGGGCAAAGGACTCTGTCCTGGCTGCCC +
Preference number: 3 (lower is better)
Translates to: KDLTVDYNGESK*FSGQRTLSWLP
Trigger: GGGCAGCCAGGACAGAGTCCTTTGCCCACTAAAGCATTTGCTCTCCCCATTGTAATCCACTGTGAGGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR GCA 72 bp TGGGCAAAAGGAGTGACAATCAGGTCATCGCCGTGTTaGTCACTGGGAAGTGATGAGTTCCTGGACATCGCT +
Preference number: 3 (lower is better)
Translates to: WAKGVTIRSSPC*SLGSDEFLDIA
Trigger: AGCGATGTCCAGGAACTCATCACTTCCCAGTGAGCAACACGGCGATGACCTGATTGTCACTCCTTTTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR TCA 72 bp GACTCAAGACAAGGAAAGGGCAGACCCTTGGAACAATaGCCATTCCTGTCCTTAACTGCTGATGGGGCTCCA +
Preference number: 3 (lower is better)
Translates to: DSRQGKGRPLEQ*PFLSLTADGAP
Trigger: TGGAGCCCCATCAGCAGTTAAGGACAGGAATGGTCATTGTTCCAAGGGTCTGCCCTTTCCTTGTCTTGAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR TCA 72 bp AGGAGTCCTGCACGTCCGGACACATTCACTGCCTTCTaGTTGGCTCCTGGAGAAACGTCAGCAACAAGTATT +
Preference number: 3 (lower is better)
Translates to: RSPARPDTFTAF*LAPGETSATSI
Trigger: AATACTTGTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTGAATGTGTCCGGACGTGCAGGACTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
3UTR CCA 72 bp TCCTCTGTTTTCAAGCCATTTAGCTTTGATGGGAACTaGCCTCTACTACCACATACAGCTGCGGGTCTCCGC +
Preference number: 3 (lower is better)
Translates to: SSVFKPFSFDGN*PLLPHTAAGLR
Trigger: GCGGAGACCCGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR TCA 72 bp TCTTGTTCGGCGCTCCATGAAGGTTCGTCAGCAGGGTaGAGTTGTTTCTTACACTTCGCAAGCTGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: SCSALHEGSSAG*SCFLHFASWQE
Trigger: TTCTTGCCAGCTTGCGAAGTGTAAGAAACAACTTCACCCTGCTGACGAACCTTCATGGAGCGCCGAACAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
3UTR CCA 72 bp TGGAGAAGGGATGAGGAGAAATCTAGGCATGGGAGATaGAGAGTACAGGTGCTCATGTGTCCACCAAATCTG +
Preference number: 3 (lower is better)
Translates to: WRRDEEKSRHGR*RVQVLMCPPNL
Trigger: CAGATTTGGTGGACACATGAGCACCTGTACTCTCCATCTCCCATGCCTAGATTTCTCCTCATCCCTTCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR-3UTR CAA 90 bp CCAGCCCTCTTCTTACACTGTGACTCTCATGACTCCCATACTGCACCTTTCCTTACACAGGACTTAGTGTaGAAGAAAAACAGGGCAGGG +
Preference number: 3 (lower is better)
Translates to: PALFLHCDSHDSHTAPFLTQDLV*KKNRAG
Trigger: CCCTGCCCTGTTTTTCTTCAACACTAAGTCCTGTGT...AAGGAAAGGTGCAGTATGGGAGTCATGAGAGTCACAGTGTAAGAAGAGGGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR TCA 72 bp TATAAGAGATGGGGAACACAAGAGATGAAAGGGAGGTaGGTGACCAGTGGAAAGATGCCCAGACAACGTGAC +
Preference number: 3 (lower is better)
Translates to: YKRWGTQEMKGR*VTSGKMPRQRD
Trigger: GTCACGTTGTCTGGGCATCTTTCCACTGGTCACTCACCTCCCTTTCATCTCTTGTGTTCCCCATCTCTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
3UTR TCA 72 bp ACCCTTGGAACAATGACCATTCCTGTCCTTAACTGCTaGTGGGGCTCCATGTTTCTCTTAAGCAATGTCTGG +
Preference number: 3 (lower is better)
Translates to: TLGTMTIPVLNC*WGSMFLLSNVW
Trigger: CCAGACATTGCTTAAGAGAAACATGGAGCCCCATCAGCAGTTAAGGACAGGAATGGTCATTGTTCCAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR CCA 72 bp GATAATCCTGTTTGCAAAACCAGCTCATCAAAGGGTTaGGCAGAACTAGGGACTCAAGACAAGGAAAGGGCA +
Preference number: 3 (lower is better)
Translates to: DNPVCKTSSSKG*AELGTQDKERA
Trigger: TGCCCTTTCCTTGTCTTGAGTCCCTAGTTCTGCCCAACCCTTTGATGAGCTGGTTTTGCAAACAGGATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR CCA 72 bp ACGTCCGGACACATTCACTGCCTTCTGATTGGCTCCTaGAGAAACGTCAGCAACAAGTATTTACAGATGATC +
Preference number: 3 (lower is better)
Translates to: TSGHIHCLLIGS*RNVSNKYLQMI
Trigger: GATCATCTGTAAATACTTGTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTGAATGTGTCCGGACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
3UTR-3UTR CAA 90 bp GACAACTGGGTCACTAAGAAGTTGACAAACTGGACCAAGAGGACAGCTGTTTATGTTTGTTTGCTTGCCTaGCCTTACACTGGGAAGATA +
Preference number: 3 (lower is better)
Translates to: DNWVTKKLTNWTKRTAVYVCLLA*PYTGKI
Trigger: TATCTTCCCAGTGTAAGGCAAGGCAAGCAAACAAAC...ATAAACAGCTGTCCTCTTGGTCCAGTTTGTCAACTTCTTAGTGACCCAGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR-3UTR CAA 90 bp CATAGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCTATTTGTTTGTTTGCTaGCCTTGCCTTACACTGGGA +
Preference number: 3 (lower is better)
Translates to: HRMFSRAHELNSSVDEDIYLFVC*PCLTLG
Trigger: TCCCAGTGTAAGGCAAGGCAAGCAAACAAACAAATA...GATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR GCA 72 bp ACCAAATCTGATGAGGTCTTAGATAACTGGAAACTTTaGTTAATACCTCACTTGAGAGCCCATGCGTGGAGA +
Preference number: 3 (lower is better)
Translates to: TKSDEVLDNWKL*LIPHLRAHAWR
Trigger: TCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGCAAAGTTTCCAGTTATCTAAGACCTCATCAGATTTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR CCA 72 bp CAGAGTCAGATTGGACAAAGAGAAGGAAGTAGCCTGTaGTTAGAACTGCATCTGTCCTGTCTATTTGCAAAA +
Preference number: 3 (lower is better)
Translates to: QSQIGQREGSSL*LELHLSCLFAK
Trigger: TTTTGCAAATAGACAGGACAGATGCAGTTCTAACCACAGGCTACTTCCTTCTCTTTGTCCAATCTGACTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR-3UTR CAA 90 bp AGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGTATGTATTTGTTTGTTaGCTTGCCTTGCCTTACACT +
Preference number: 3 (lower is better)
Translates to: RMFSRAHELNSSVDEDIRYVFVC*LALPYT
Trigger: AGTGTAAGGCAAGGCAAGCAAACAAACAAATACATA...CCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR TCA 72 bp TCATCTGAAATGGTGACATCATGCTTGATTAAGGATTaGAACAGATGTGTGGGGAGCACCAATAAGGTGTTG +
Preference number: 3 (lower is better)
Translates to: SSEMVTSCLIKD*NRCVGSTNKVL
Trigger: CAACACCTTATTGGTGCTCCCCACACATCTGTTTCAATCCTTAATCAAGCATGATGTCACCATTTCAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR TCA 72 bp TACATGACAGAAAGGACAACTGGGTCACTAAGAAGTTaGCAAACTGGACCAAGAGGACAGCTGTTTATGTAT +
Preference number: 3 (lower is better)
Translates to: YMTERTTGSLRS*QTGPRGQLFMY
Trigger: ATACATAAACAGCTGTCCTCTTGGTCCAGTTTGTCAACTTCTTAGTGACCCAGTTGTCCTTTCTGTCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR CCA 72 bp AGCAGTATGGAGACTAGCTCTTCCAAGTCAGTAGTTTaGGGATACTCAGTATCATCTGTGATCAAATGTAGT +
Preference number: 3 (lower is better)
Translates to: SSMETSSSKSVV*GYSVSSVIKCS
Trigger: ACTACATTTGATCACAGATGATACTGAGTATCCCCAAACTACTGACTTGGAAGAGCTAGTCTCCATACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR CCA 72 bp CATGTGTCCACCAAATCTGATGAGGTCTTAGATAACTaGAAACTTTGCTTAATACCTCACTTGAGAGCCCAT +
Preference number: 3 (lower is better)
Translates to: HVSTKSDEVLDN*KLCLIPHLRAH
Trigger: ATGGGCTCTCAAGTGAGGTATTAAGCAAAGTTTCCAGTTATCTAAGACCTCATCAGATTTGGTGGACACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
3UTR CCA 72 bp AATCCTTATGGACATCTTGCAGGTACTCAAGGGCTGTaGTTGGATGTTAGTTCAATGTTTCCTTCATTTCCA +
Preference number: 3 (lower is better)
Translates to: NPYGHLAGTQGL*LDVSSMFPSFP
Trigger: TGGAAATGAAGGAAACATTGAACTAACATCCAACCACAGCCCTTGAGTACCTGCAAGATGTCCATAAGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR TCA 72 bp TTTACTGAATTCAGTTTCTTCATTGGCTGGATTTCTTaGCTGAATGAGTTGTGGCTGCACTCTGAACGATCT +
Preference number: 3 (lower is better)
Translates to: FTEFSFFIGWIS*LNELWLHSERS
Trigger: AGATCGTTCAGAGTGCAGCCACAACTCATTCAGTCAAGAAATCCAGCCAATGAAGAAACTGAATTCAGTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR-3UTR CAA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATACTCAAGGGCTGTGGTaGGATGTTAGTTCAATGTTT +
Preference number: 3 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDTQGLW*DVSSMF
Trigger: AAACATTGAACTAACATCCAACCACAGCCCTTGAGT...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR GCA 72 bp GAACGCTTTCCTCATGTACAGATAGATGCAAGGAGATaGATTAACATAATGCAATTTGTAGAGCTGAGTATA +
Preference number: 3 (lower is better)
Translates to: ERFPHVQIDARR*INIMQFVELSI
Trigger: TATACTCAGCTCTACAAATTGCATTATGTTAATGCATCTCCTTGCATCTATCTGTACATGAGGAAAGCGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR TCA 72 bp GTGCCATTTTCTTTAACTATTGTCACAATGCTGAACTaGAGCATGACACGTATTTTACAAACTGAAACTGAC +
Preference number: 3 (lower is better)
Translates to: VPFSLTIVTMLN*SMTRILQTETD
Trigger: GTCAGTTTCAGTTTGTAAAATACGTGTCATGCTTCAGTTCAGCATTGTGACAATAGTTAAAGAAAATGGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR TCA 72 bp GCTCATGCTTTAAGTGTGACATTATATTCACTTCTTTaGATAGTTTTCCCTGGACAATGTTCTCTGAGAATC +
Preference number: 3 (lower is better)
Translates to: AHALSVTLYSLL*IVFPGQCSLRI
Trigger: GATTCTCAGAGAACATTGTCCAGGGAAAACTATTCAAAGAAGTGAATATAATGTCACACTTAAAGCATGAGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR GCA 72 bp TATAAACCATTTAGTATCGAATATGATAATCCTGTTTaGAAAACCAGCTCATCAAAGGGTTGGGCAGAACTA +
Preference number: 3 (lower is better)
Translates to: YKPFSIEYDNPV*KTSSSKGWAEL
Trigger: TAGTTCTGCCCAACCCTTTGATGAGCTGGTTTTGCAAACAGGATTATCATATTCGATACTAAATGGTTTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR TCA 72 bp TTTCTGAGTTACAGCTTCATTCTTGCAAACTTTTACTaGATTCAGTTTCTTCATTGGCTGGATTTCTTGACT +
Preference number: 3 (lower is better)
Translates to: FLSYSFILANFY*IQFLHWLDFLT
Trigger: AGTCAAGAAATCCAGCCAATGAAGAAACTGAATTCAGTAAAAGTTTGCAAGAATGAAGCTGTAACTCAGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR CAA 72 bp GGCGGCATGAAGTACCAGTCCCGACGAAGAGCCGGCTaGAGGGTCCAGTGGGCTCCGACCTGGAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GGMKYQSRRRAG*RVQWAPTWRRA
Trigger: GGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTGGTACTTCATGCCGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR TCA 90 bp TCCCGACGAAGAGCCGGCTTGAGGGTCCAGTGGGCTCCGACCTGGAGAAGGGCCAGTAGCTTCCATGTATaGGCCACCGTGAAGCGACGC +
Preference number: 4 (lower is better)
Translates to: SRRRAGLRVQWAPTWRRASSFHV*ATVKRR
Trigger: GCGTCGCTTCACGGTGGCTCATACATGGAAGCTACT...GGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGGCTCCTCTCATCCAGTaGCGGGGAAGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGAPLIQ*RGRALG
Trigger: CCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGC...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGAACGACTCCCTGCGCTaGCTGTGCCCAGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGNDSLR*LCPGKA
Trigger: CGCCTTTCCTGGGCACAGCCAGCGCAGGGAGTCGTT...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CAGGAAAGGCGGCATGAAGTACCAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAATGTATGAGCCACCGTaGAGCGACGCCGCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: QERRHEVPVPTKSRLEGPMYEPP*SDAAVG
Trigger: TCCGACAGCGGCGTCGCTTCACGGTGGCTCATACAT...TGGACCCTCAAGCCGGCTCTTCGTCGGGACTGGTACTTCATGCCGCCTTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR GCA 90 bp CCTGCAGAGGCCCAGGGTGAGAAGCAGGCGGGTAGTAGAGGTGCTGATTCTTGCTGGTTGGCCTGGAAATaGCATCTCCCTCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PAEAQGEKQAGSRGADSCWLAWK*HLPRGS
Trigger: GGACCCCCGAGGGAGATGGCATTTCCAGGCCAACCA...GCAAGAATCAGCACCTCTACTACCCGCCTGCTTCTCACCCTGGGCCTCTGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR CCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGGCTCCTCTCATCCAGTaGCGGGGAAGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGEAPLIQ*RGRALG
Trigger: CCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGC...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLGLRVQ*APTWRR
Trigger: CCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCC...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR CAA 72 bp TGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTaGACCCTACCACTCAGCGGGCATGCTCGTCAAGGG +
Preference number: 4 (lower is better)
Translates to: WPLSCAGLGHGR*TLPLSGHARQG
Trigger: CCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGGTAGTTAGGCTGCAGTaGCTGCAGGCTGGCCATAGC +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGVVRLQ*LQAGHS
Trigger: GCTATGGCCAGCCTGCAGCCACTGCAGCCTAACTAC...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000097950.9
CDS-3UTR CCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGAACGACTCCCTGCGCTaGCTGTGCCCAGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGRENDSLR*LCPGKA
Trigger: CGCCTTTCCTGGGCACAGCCAGCGCAGGGAGTCGTT...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACCGGTTGAACCAGGTCTaGCCAGGTCTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: DPTTQRACSSRVECSSPHRLNQV*PGLPQW
Trigger: CCACTGTGGGAGACCTGGGCAGACCTGGTTCAACCG...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GCGGGTCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCGGTTGAACCAGGTCTaGCCAGGTCTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: AGLRQACRQGKTAWNCYLRLNQV*PGLPQW
Trigger: CCACTGTGGGAGACCTGGGCAGACCTGGTTCAACCG...CAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGTGGTTGGCCTGGAAATaGCATCTCCCTCGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGWLAWK*HLPRGS
Trigger: GGACCCCCGAGGGAGATGGCATTTCCAGGCCAACCA...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRGLRVQ*APTWRR
Trigger: CCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCC...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TGCACGTCCGGACACATTCACTGCCTTCTGATTGGCTCCTGGAGAAACGTCAGCAACGACTCCCTGCGCTaGCTGTGCCCAGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: CTSGHIHCLLIGSWRNVSNDSLR*LCPGKA
Trigger: CGCCTTTCCTGGGCACAGCCAGCGCAGGGAGTCGTT...GCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTGAATGTGTCCGGACGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CCA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACGCTGACTCTGGAGACTaGAGCCTGACTAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: DPTTQRACSSRVECSSPHADSGD*SLTSRW
Trigger: CCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGC...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGGCTGACTCTGGAGACTaGAGCCTGACTAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGEADSGD*SLTSRW
Trigger: CCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGC...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGAAGGAGAACGTGAGTTaGCTGGGCCACGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGREKENVS*LGHVSS
Trigger: GCTGCTGACGTGGCCCAGTCAACTCACGTTCTCCTT...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAAGGAGAACGTGAGTTaGCTGGGCCACGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DPTTQRACSSRVECSSPHKENVS*LGHVSS
Trigger: GCTGCTGACGTGGCCCAGTCAACTCACGTTCTCCTT...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGGTAGAAAGGAGAACGTaGGTTGACTGGGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGVERRT*VDWATS
Trigger: TGACGTGGCCCAGTCAACTCACGTTCTCCTTTCTAC...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCCCTGGGCAAAAGGAGTaGCAATCAGGTCATCGCCGT +
Preference number: 4 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLPGQKE*QSGHRR
Trigger: ACGGCGATGACCTGATTGTCACTCCTTTTGCCCAGG...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCCGGTTGAACCAGGTCTaGCCAGGTCTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: GKARQHGTAICFTAWHSGRLNQV*PGLPQW
Trigger: CCACTGTGGGAGACCTGGGCAGACCTGGTTCAACCG...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTTAGGCTGCAGTGGCTaGAGGCTGGCCATAGCCGAG +
Preference number: 4 (lower is better)
Translates to: GKARQHGTAICFTAWHSGLGCSG*RLAIAE
Trigger: CTCGGCTATGGCCAGCCTGCAGCCACTGCAGCCTAA...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097950.9
CDS-3UTR GCA 90 bp CCTGCAGAGGCCCAGGGTGAGAAGCAGGCGGGTAGTAGAGGTGCTGATTCTTGCCTGAACAGCACCTTCTaGCTCTCCAGAGGTCAATCC +
Preference number: 4 (lower is better)
Translates to: PAEAQGEKQAGSRGADSCLNSTF*LSRGQS
Trigger: GGATTGACCTCTGGAGAGGCAGAAGGTGCTGTTCAG...GCAAGAATCAGCACCTCTACTACCCGCCTGCTTCTCACCCTGGGCCTCTGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGCCCTGTCCTTCTGCGTaGGAGATGGGATTTCCACAT +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGPCPSA*EMGFPH
Trigger: ATGTGGAAATCCCATCTCCCACGCAGAAGGACAGGG...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCAACGACTCCCTGCGCTaGCTGTGCCCAGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFNDSLR*LCPGKA
Trigger: CGCCTTTCCTGGGCACAGCCAGCGCAGGGAGTCGTT...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGAAGGAGAACGTGAGTTaGCTGGGCCACGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRKENVS*LGHVSS
Trigger: GCTGCTGACGTGGCCCAGTCAACTCACGTTCTCCTT...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTCAGATGTATGAGCCACCGTaGAGCGACGCCGCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: SHVTTGLRVSLQGMDRTQMYEPP*SDAAVG
Trigger: TCCGACAGCGGCGTCGCTTCACGGTGGCTCATACAT...CTGAGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR TCA 90 bp CCTGCAGAGGCCCAGGGTGAGAAGCAGGCGGGTAGTAGAGGTGCTGATTCTTGCGGACATCGCTTTTGGTaGCAAGTCATAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: PAEAQGEKQAGSRGADSCGHRFW*QVIVAV
Trigger: GACAGCGACTATGACTTGTCACCAAAAGCGATGTCC...GCAAGAATCAGCACCTCTACTACCCGCCTGCTTCTCACCCTGGGCCTCTGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR GCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAACGGTTGAACCAGGTCTaGCCAGGTCTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQRLNQV*PGLPQW
Trigger: CCACTGTGGGAGACCTGGGCAGACCTGGTTCAACCG...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGCTTCTGCGTGGGAGATaGGATTTCCACATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGLLRGR*DFHIVL
Trigger: CAGAACGATGTGGAAATCCCATCTCCCACGCAGAAG...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACTTCTCCATCAGGCCTTaGCAGTCCCTGCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: DPTTQRACSSRVECSSPHFSIRP*QSLLLS
Trigger: TGAGAGGAGCAGGGACTGCCAAGGCCTGATGGAGAA...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGCGGTAGGTCTGGATaGTCTCTAGCTGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGSGRSG*SLAGLG
Trigger: GCCTAGACCAGCTAGAGACCATCCAGACCTACCGCT...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGCAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRQWAPT*RRAIFH
Trigger: GTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTG...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQGLRVQ*APTWRR
Trigger: CCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCC...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTCAGGCTGACTCTGGAGACTaGAGCCTGACTAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SHVTTGLRVSLQGMDRTQADSGD*SLTSRW
Trigger: CCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGC...CTGAGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CCA 90 bp CCTGCAGAGGCCCAGGGTGAGAAGCAGGCGGGTAGTAGAGGTGCTGATTCTTGCCTTTCACTCTGTCTCTaGGACAATGGTGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: PAEAQGEKQAGSRGADSCLSLCL*DNGGSC
Trigger: ACAGCTGCCACCATTGTCCCAGAGACAGAGTGAAAG...GCAAGAATCAGCACCTCTACTACCCGCCTGCTTCTCACCCTGGGCCTCTGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR CCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGGTAGTGTGGTTGGCCTaGAAATGCCATCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGEVVWLA*KCHLPR
Trigger: CCGAGGGAGATGGCATTTCCAGGCCAACCACACTAC...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGCCTCATTTTCCGTGTTaGCTCCGAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGREPHFPC*LRSVRC
Trigger: GCATCTCACGCTTCGGAGTCAACACGGAAAATGAGG...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGAAGGAGAACGTGAGTTaGCTGGGCCACGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SAKLAGKARQHGTAICFTKENVS*LGHVSS
Trigger: GCTGCTGACGTGGCCCAGTCAACTCACGTTCTCCTT...CGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGGTAGAAAGGAGAACGTaGGTTGACTGGGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGREVERRT*VDWATS
Trigger: TGACGTGGCCCAGTCAACTCACGTTCTCCTTTCTAC...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGGCGTCTTTGTGCTGCTaGAATAGCTGTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGREASLCC*NSCGLL
Trigger: GAGAAGGCCACAGCTATTTCAGCAGCACAAAGACGC...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGGCGTCTTTGTGCTGCTaGAATAGCTGTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGEASLCC*NSCGLL
Trigger: GAGAAGGCCACAGCTATTTCAGCAGCACAAAGACGC...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGTTCTCCCTGTCCTTCTaGGTGGGAGATGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGFSLSF*VGDGIS
Trigger: GGAAATCCCATCTCCCACGCAGAAGGACAGGGAGAA...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGTTCTCCCTGTCCTTCTaGGTGGGAGATGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGREFSLSF*VGDGIS
Trigger: GGAAATCCCATCTCCCACGCAGAAGGACAGGGAGAA...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGATCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGIMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAT...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGTTGAACCAGGTCTaGCCAGGTCTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: SPPSLQARQDSMELLFASRLNQV*PGLPQW
Trigger: CCACTGTGGGAGACCTGGGCAGACCTGGTTCAACCG...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACGGTTGAACCAGGTCTaGCCAGGTCTCCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKRLNQV*PGLPQW
Trigger: CCACTGTGGGAGACCTGGGCAGACCTGGTTCAACCG...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGGTCATCGCCGTGTTaGTCACTGGGAAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGRSSPC*SLGSDE
Trigger: CTCATCACTTCCCAGTGAGCAACACGGCGATGACCT...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGCTGAACAGCACCTTCTaGCTCTCCAGAGGTCAATCC +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGELNSTF*LSRGQS
Trigger: GGATTGACCTCTGGAGAGGCAGAAGGTGCTGTTCAG...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTCCCTCGGGGGTCCTTaGCCTTTCACTCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFSLGGP*PFTLSL
Trigger: CAGAGACAGAGTGAAAGGGCAAGGACCCCCGAGGGA...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGCCCTGTCCTTCTGCGTaGGAGATGGGATTTCCACAT +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGPCPSA*EMGFPH
Trigger: ATGTGGAAATCCCATCTCCCACGCAGAAGGACAGGG...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGFTPLI*VMSCCF
Trigger: GAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGGATCGACATCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGDRHHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGATGTCGATC...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GCTTCCCAACACCTAGTGCAGAGCAATCTCTCAGCTTTGTGTCCTCTGTTTTCAGCTCCTCTCATCCAGTaGCGGGGAAGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: ASQHLVQSNLSALCPLFSAPLIQ*RGRALG
Trigger: CCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGC...TGAAAACAGAGGACACAAAGCTGAGAGATTGCTCTGCACTAGGTGTTGGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCAGCGGTAGGTCTGGATaGTCTCTAGCTGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: GKARQHGTAICFTAWHSGSGRSG*SLAGLG
Trigger: GCCTAGACCAGCTAGAGACCATCCAGACCTACCGCT...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGATGCCCAGACAACGTGACATGGCCTGATTCCCATGTAACCACAGGGTTGAGGCAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: RCPDNVTWPDSHVTTGLRQWAPT*RRAIFH
Trigger: GTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTG...CCTCAACCCTGTGGTTACATGGGAATCAGGCCATGTCACGTTGTCTGGGCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CCA 90 bp GCAGACAGATTGCACACAGGACTTAGTGTTGAAGAAAAACAGGGCAGGGGCAGAGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: ADRLHTGLSVEEKQGRGRGLRVQ*APTWRR
Trigger: CCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCC...TCTGCCCCTGCCCTGTTTTTCTTCAACACTAAGTCCTGTGTGCAATCTGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGTTACACTTCGCAAGCTaGCAAGAACCTGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGLHFAS*QEPGQK
Trigger: CTTTTGCCCAGGTTCTTGCCAGCTTGCGAAGTGTAA...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGCCTCATTTTCCGTGTTaGCTCCGAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRPHFPC*LRSVRC
Trigger: GCATCTCACGCTTCGGAGTCAACACGGAAAATGAGG...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATGTAGAAAGGAGAACGTaGGTTGACTGGGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHVERRT*VDWATS
Trigger: TGACGTGGCCCAGTCAACTCACGTTCTCCTTTCTAC...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGAATCCCACAGCAAGGTaGTGGTTTTCCAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGNPTAR*WFSRTD
Trigger: ATCTGTTCTGGAAAACCATCACCTTGCTGTGGGATT...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGCCTCTTGTAGCAATTTaGATCCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGPLVAI*IPQQGD
Trigger: ATCACCTTGCTGTGGGATTCAAATTGCTACAAGAGG...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGCGTCTTTGTGCTGCTaGAATAGCTGTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRASLCC*NSCGLL
Trigger: GAGAAGGCCACAGCTATTTCAGCAGCACAAAGACGC...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGGGACATCGCTTTTGGTaGCAAGTCATAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGGHRFW*QVIVAV
Trigger: GACAGCGACTATGACTTGTCACCAAAAGCGATGTCC...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GCGGGTCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGGGACATCGCTTTTGGTaGCAAGTCATAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: AGLRQACRQGKTAWNCYLGHRFW*QVIVAV
Trigger: GACAGCGACTATGACTTGTCACCAAAAGCGATGTCC...CAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTCAGCCTGGGCAAAAGGAGTaGCAATCAGGTCATCGCCGT +
Preference number: 4 (lower is better)
Translates to: SHVTTGLRVSLQGMDRTQPGQKE*QSGHRR
Trigger: ACGGCGATGACCTGATTGTCACTCCTTTTGCCCAGG...CTGAGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR TCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGATTCTTCTTGCAGGCTaGCTCTGGAGACTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRILLAG*LWRLEP
Trigger: AGGCTCCAGTCTCCAGAGTCAGCCTGCAAGAAGAAT...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCCACAGTGTACCATGTTaGGAAGAACCTGTATCCGGT +
Preference number: 4 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLHSVPC*EEPVSG
Trigger: ACCGGATACAGGTTCTTCGCAACATGGTACACTGTG...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCCGTTCTTTGTCTCCCTaGTGGAAAAACTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLRSLSP*WKNSSM
Trigger: CATGGAGGAGTTTTTCCAGCAGGGAGACAAAGAACG...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ATGAAGTACCAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTGGGCTCCGACCAGTTCCAAGCGCATCTaGTCCTTGAAAGTCTTTATG +
Preference number: 4 (lower is better)
Translates to: MKYQSRRRAGLRVQWAPTSSKRI*SLKVFM
Trigger: CATAAAGACTTTCAAGGAGCAGATGCGCTTGGAACT...GGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTGGTACTTCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR GCA 90 bp TGCACGTCCGGACACATTCACTGCCTTCTGATTGGCTCCTGGAGAAACGTCAGCAGGTCATCGCCGTGTTaGTCACTGGGAAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: CTSGHIHCLLIGSWRNVSRSSPC*SLGSDE
Trigger: CTCATCACTTCCCAGTGAGCAACACGGCGATGACCT...GCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTGAATGTGTCCGGACGTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR GCA 90 bp AGATGCCCAGACAACGTGACATGGCCTGATTCCCATGTAACCACAGGGTTGAGGCTGTGGTCGCACACTTaGAGGCTGACTCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: RCPDNVTWPDSHVTTGLRLWSHT*RLTLET
Trigger: AGTCTCCAGAGTCAGCCTGCAAGTGTGCGACCACAG...CCTCAACCCTGTGGTTACATGGGAATCAGGCCATGTCACGTTGTCTGGGCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CCA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCCCCTGTCCTTCTGCGTaGGAGATGGGATTTCCACAT +
Preference number: 4 (lower is better)
Translates to: GKARQHGTAICFTAWHSGPCPSA*EMGFPH
Trigger: ATGTGGAAATCCCATCTCCCACGCAGAAGGACAGGG...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLFTPLI*VMSCCF
Trigger: GAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGETIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAAGCGGTAGGTCTGGATaGTCTCTAGCTGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQSGRSG*SLAGLG
Trigger: GCCTAGACCAGCTAGAGACCATCCAGACCTACCGCT...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGAGCGGTAGGTCTGGATaGTCTCTAGCTGGTCTAGGC +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARSGRSG*SLAGLG
Trigger: GCCTAGACCAGCTAGAGACCATCCAGACCTACCGCT...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGCTGACTCTGGAGACTaGAGCCTGACTAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQADSGD*SLTSRW
Trigger: CCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGC...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAATCCAGGAGTGTCTCCTaGGAGGAGGCAAGTCGTTCA +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQSRSVS*EEASRS
Trigger: TGAACGACTTGCCTCCTCCCAGGAGACACTCCTGGA...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106904.9
CDS-3UTR TCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAACCTCATTTTCCGTGTTaGCTCCGAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQPHFPC*LRSVRC
Trigger: GCATCTCACGCTTCGGAGTCAACACGGAAAATGAGG...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGTAGAAAGGAGAACGTaGGTTGACTGGGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: SAKLAGKARQHGTAICFTVERRT*VDWATS
Trigger: TGACGTGGCCCAGTCAACTCACGTTCTCCTTTCTAC...CGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGAGGGTCAGTTCAAACTaGAACTTCTCCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGRERVSSN*NFSIRP
Trigger: AGGCCTGATGGAGAAGTTTCAGTTTGAACTGACCCT...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCGCGTCTTTGTGCTGCTaGAATAGCTGTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFASLCC*NSCGLL
Trigger: GAGAAGGCCACAGCTATTTCAGCAGCACAAAGACGC...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGGGTTCGTCAGCAGGGTaGAGTTGTTTCTTACACTTC +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGEGSSAG*SCFLHF
Trigger: GAAGTGTAAGAAACAACTTCACCCTGCTGACGAACC...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTTCTCCCTGTCCTTCTaGGTGGGAGATGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFFSLSF*VGDGIS
Trigger: GGAAATCCCATCTCCCACGCAGAAGGACAGGGAGAA...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAATTCTCCCTGTCCTTCTaGGTGGGAGATGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQFSLSF*VGDGIS
Trigger: GGAAATCCCATCTCCCACGCAGAAGGACAGGGAGAA...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCTTCAGGCTTGAGCTGTaGATCAGTTTCTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLFRLEL*ISFFTP
Trigger: TGGAGTGAAGAAACTGATGCACAGCTCAAGCCTGAA...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGCTCCGAAGCGTGAGATaGTTGTGTTGTTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRLRSVR*LCCSGL
Trigger: CAAGCCTGAACAACACAAGCATCTCACGCTTCGGAG...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACATCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: DPTTQRACSSRVECSSPHIMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAT...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACCACAGTGTACCATGTTaGGAAGAACCTGTATCCGGT +
Preference number: 4 (lower is better)
Translates to: DPTTQRACSSRVECSSPHHSVPC*EEPVSG
Trigger: ACCGGATACAGGTTCTTCGCAACATGGTACACTGTG...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGCACAGTGTACCATGTTaGGAAGAACCTGTATCCGGT +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGHSVPC*EEPVSG
Trigger: ACCGGATACAGGTTCTTCGCAACATGGTACACTGTG...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GGACAAGAAATGGTGAATGGGACAGGAAAGGACGGCCTGAGTATAAGGACCTCATCCCTCGGGGGTCCTTaGCCTTTCACTCTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GQEMVNGTGKDGLSIRTSSLGGP*PFTLSL
Trigger: CAGAGACAGAGTGAAAGGGCAAGGACCCCCGAGGGA...TGAGGTCCTTATACTCAGGCCGTCCTTTCCTGTCCCATTCACCATTTCTTGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR CCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGATGTACTCAGACACCTaGTTCCCTGATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGMYSDT*FPDLLI
Trigger: GATGAGCAGATCAGGGAACCAGGTGTCTGAGTACAT...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGCTTCTGCGTGGGAGATaGGATTTCCACATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRLLRGR*DFHIVL
Trigger: CAGAACGATGTGGAAATCCCATCTCCCACGCAGAAG...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGFTPLI*VMSCCF
Trigger: GAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCGGAGGCTCATGTGTTTaGACATATCAGTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLGGSCV*TYQLPT
Trigger: TGTTGGCAACTGATATGTCCAAACACATGAGCCTCC...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RQDSMELLFASRPGILAPIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GKARQHGTAICFTAWHSGTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGGCTCCTCTCATCCAGTaGCGGGGAAGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQAPLIQ*RGRALG
Trigger: CCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGC...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGTTCTCCATCAGGCCTTaGCAGTCCCTGCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQFSIRP*QSLLLS
Trigger: TGAGAGGAGCAGGGACTGCCAAGGCCTGATGGAGAA...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAATTCTCCATCAGGCCTTaGCAGTCCCTGCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKFSIRP*QSLLLS
Trigger: TGAGAGGAGCAGGGACTGCCAAGGCCTGATGGAGAA...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTCAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSQWAPT*RRAIFH
Trigger: GTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTG...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGACAAGAAATGGTGAATGGGACAGGAAAGGACGGCCTGAGTATAAGGACCTCACAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GQEMVNGTGKDGLSIRTSQWAPT*RRAIFH
Trigger: GTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTG...TGAGGTCCTTATACTCAGGCCGTCCTTTCCTGTCCCATTCACCATTTCTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR CCA 90 bp CACTGCCTTCTGATTGGCTCCTGGAGAAACGTCAGCAACAAGTATTTACAGATGGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: HCLLIGSWRNVSNKYLQMGLRVQ*APTWRR
Trigger: CCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCC...CATCTGTAAATACTTGTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAAGCTGGCAAGAACCTaGGCAAAAGGAGTGACAATC +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGKLART*AKGVTI
Trigger: GATTGTCACTCCTTTTGCCCAGGTTCTTGCCAGCTT...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR CAA 72 bp GCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTaGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAA +
Preference number: 4 (lower is better)
Translates to: ACRQGKTAWNCY*LHGLAFWLQTQ
Trigger: TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
3UTR CAA 72 bp AACGTGACATGGCCTGATTCCCATGTAACCACAGGGTaGAGGGTGAGTCTTCAGGGAATGGACCGAACTCAG +
Preference number: 4 (lower is better)
Translates to: NVTWPDSHVTTG*RVSLQGMDRTQ
Trigger: CTGAGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGAATCAGGCCATGTCACGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR TCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGTGTGTTGTTCAGGCTTaGGCTGTGCATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGCVVQA*AVHQFL
Trigger: AAGAAACTGATGCACAGCTCAAGCCTGAACAACACA...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACTGTGTTGTTCAGGCTTaGGCTGTGCATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: DPTTQRACSSRVECSSPHCVVQA*AVHQFL
Trigger: AAGAAACTGATGCACAGCTCAAGCCTGAACAACACA...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGCCTCATTTTCCGTGTTaGCTCCGAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQPHFPC*LRSVRC
Trigger: GCATCTCACGCTTCGGAGTCAACACGGAAAATGAGG...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAGCATGCAGGCTGTTGTaGTATGCCACATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQACRLL*YATSEW
Trigger: CCATTCTGATGTGGCATATCACAACAGCCTGCATGC...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGGCATGCAGGCTGTTGTaGTATGCCACATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARACRLL*YATSEW
Trigger: CCATTCTGATGTGGCATATCACAACAGCCTGCATGC...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCATGCAGGCTGTTGTaGTATGCCACATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: SAKLAGKARQHGTAICFTACRLL*YATSEW
Trigger: CCATTCTGATGTGGCATATCACAACAGCCTGCATGC...CGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GCTTCCCAACACCTAGTGCAGAGCAATCTCTCAGCTTTGTGTCCTCTGTTTTCAAAGGAGAACGTGAGTTaGCTGGGCCACGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ASQHLVQSNLSALCPLFSKENVS*LGHVSS
Trigger: GCTGCTGACGTGGCCCAGTCAACTCACGTTCTCCTT...TGAAAACAGAGGACACAAAGCTGAGAGATTGCTCTGCACTAGGTGTTGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGAAGGAGAACGTGAGTTaGCTGGGCCACGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAAKENVS*LGHVSS
Trigger: GCTGCTGACGTGGCCCAGTCAACTCACGTTCTCCTT...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAATTGGAGACTCCAGGATaGTCGACATCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQLETPG*STSWMA
Trigger: TGCCATCCATGATGTCGATCATCCTGGAGTCTCCAA...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTTGGAGACTCCAGGATaGTCGACATCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARLETPG*STSWMA
Trigger: TGCCATCCATGATGTCGATCATCCTGGAGTCTCCAA...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCAGGGTCAGTTCAAACTaGAACTTCTCCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GKARQHGTAICFTAWHSGRVSSN*NFSIRP
Trigger: AGGCCTGATGGAGAAGTTTCAGTTTGAACTGACCCT...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGCGTCTTTGTGCTGCTaGAATAGCTGTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQASLCC*NSCGLL
Trigger: GAGAAGGCCACAGCTATTTCAGCAGCACAAAGACGC...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTCAGGGACATCGCTTTTGGTaGCAAGTCATAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: SHVTTGLRVSLQGMDRTQGHRFW*QVIVAV
Trigger: GACAGCGACTATGACTTGTCACCAAAAGCGATGTCC...CTGAGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR TCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTCCTGGGCAAAAGGAGTaGCAATCAGGTCATCGCCGT +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSPGQKE*QSGHRR
Trigger: ACGGCGATGACCTGATTGTCACTCCTTTTGCCCAGG...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CACTGCCTTCTGATTGGCTCCTGGAGAAACGTCAGCAACAAGTATTTACAGATGCGCACACTTGCAGGCTaGCTCTGGAGACTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: HCLLIGSWRNVSNKYLQMRTLAG*LWRLEP
Trigger: AGGCTCCAGTCTCCAGAGTCAGCCTGCAAGTGTGCG...CATCTGTAAATACTTGTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR TCA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAAATTCTTCTTGCAGGCTaGCTCTGGAGACTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKILLAG*LWRLEP
Trigger: AGGCTCCAGTCTCCAGAGTCAGCCTGCAAGAAGAAT...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGTCCATTGCTAGTTTCTaGTATGATTCTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGSIASF*YDSSCR
Trigger: CCTGCAAGAAGAATCATATCAGAAACTAGCAATGGA...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GGAGAAGGGATGAGGAGAAATCTAGGCATGGGAGATGGAGAGTACAGGTGCTCATTCTCCCTGTCCTTCTaGGTGGGAGATGGGATTTCC +
Preference number: 4 (lower is better)
Translates to: GEGMRRNLGMGDGEYRCSFSLSF*VGDGIS
Trigger: GGAAATCCCATCTCCCACGCAGAAGGACAGGGAGAA...TGAGCACCTGTACTCTCCATCTCCCATGCCTAGATTTCTCCTCATCCCTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR GCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGTTCAGGCTTGAGCTGTaGATCAGTTTCTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGREFRLEL*ISFFTP
Trigger: TGGAGTGAAGAAACTGATGCACAGCTCAAGCCTGAA...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGTTCAGGCTTGAGCTGTaGATCAGTTTCTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGEFRLEL*ISFFTP
Trigger: TGGAGTGAAGAAACTGATGCACAGCTCAAGCCTGAA...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACATACGATCGGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: DPTTQRACSSRVECSSPHIRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACCGATCGTAT...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGTCCACAGAAGCTGTGTaGTTATCACACATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGESTEAV*LSHIGL
Trigger: TAGCCCAATGTGTGATAAGCACACAGCTTCTGTGGA...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGTCCACAGAAGCTGTGTaGTTATCACACATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGRESTEAV*LSHIGL
Trigger: TAGCCCAATGTGTGATAAGCACACAGCTTCTGTGGA...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CCTGATTCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAGACGCCGCTGTCGGATaGTTTTATTCACCAGCAACT +
Preference number: 4 (lower is better)
Translates to: PDSHVTTGLRVSLQGMDRDAAVG*FYSPAT
Trigger: AGTTGCTGGTGAATAAAAGCATCCGACAGCGGCGTC...TCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR GCA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAGACGCCGCTGTCGGATaGTTTTATTCACCAGCAACT +
Preference number: 4 (lower is better)
Translates to: RQDSMELLFASRPGILAPDAAVG*FYSPAT
Trigger: AGTTGCTGGTGAATAAAAGCATCCGACAGCGGCGTC...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CCA 90 bp TCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGCTTCTGCGTGGGAGATaGGATTTCCACATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: SAKLAGKARQHGTAICFTLLRGR*DFHIVL
Trigger: CAGAACGATGTGGAAATCCCATCTCCCACGCAGAAG...CGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCTTCTGCGTGGGAGATaGGATTTCCACATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: ARQDSMELLFASRPGILALLRGR*DFHIVL
Trigger: CAGAACGATGTGGAAATCCCATCTCCCACGCAGAAG...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGAGAAGGGATGAGGAGAAATCTAGGCATGGGAGATGGAGAGTACAGGTGCTCACCCTGTCCTTCTGCGTaGGAGATGGGATTTCCACAT +
Preference number: 4 (lower is better)
Translates to: GEGMRRNLGMGDGEYRCSPCPSA*EMGFPH
Trigger: ATGTGGAAATCCCATCTCCCACGCAGAAGGACAGGG...TGAGCACCTGTACTCTCCATCTCCCATGCCTAGATTTCTCCTCATCCCTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHFTPLI*VMSCCF
Trigger: GAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRFTPLI*VMSCCF
Trigger: GAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGATCGACATCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRDRHHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGATGTCGATC...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGGGAGGCTCATGTGTTTaGACATATCAGTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGGGSCV*TYQLPT
Trigger: TGTTGGCAACTGATATGTCCAAACACATGAGCCTCC...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: KARQHGTAICFTAWHSGSTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...GGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGGTGCTTATCACACATTaGGCTAATCTCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGREVLITH*ANLHSP
Trigger: AGGGGAATGGAGATTAGCCCAATGTGTGATAAGCAC...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTTTCTCCATCAGGCCTTaGCAGTCCCTGCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSFSIRP*QSLLLS
Trigger: TGAGAGGAGCAGGGACTGCCAAGGCCTGATGGAGAA...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AATGACTCATCATCTGTAAGAAAGGCCACTGAAATTGCTAGGGCCTTGAGGAGTAACGACTCCCTGCGCTaGCTGTGCCCAGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: NDSSSVRKATEIARALRSNDSLR*LCPGKA
Trigger: CGCCTTTCCTGGGCACAGCCAGCGCAGGGAGTCGTT...ACTCCTCAAGGCCCTAGCAATTTCAGTGGCCTTTCTTACAGATGATGAGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR CCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGAAGCTGGCAAGAACCTaGGCAAAAGGAGTGACAATC +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRKLART*AKGVTI
Trigger: GATTGTCACTCCTTTTGCCCAGGTTCTTGCCAGCTT...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCCTTTCACTCTGTCTCTaGGACAATGGTGGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: KARQHGTAICFTAWHSGSLSLCL*DNGGSC
Trigger: ACAGCTGCCACCATTGTCCCAGAGACAGAGTGAAAG...GGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGACAAGAAATGGTGAATGGGACAGGAAAGGACGGCCTGAGTATAAGGACCTCAGTAGTGTGGTTGGCCTaGAAATGCCATCTCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GQEMVNGTGKDGLSIRTSVVWLA*KCHLPR
Trigger: CCGAGGGAGATGGCATTTCCAGGCCAACCACACTAC...TGAGGTCCTTATACTCAGGCCGTCCTTTCCTGTCCCATTCACCATTTCTTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR TCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGCATGCAGGCTGTTGTaGTATGCCACATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQACRLL*YATSEW
Trigger: CCATTCTGATGTGGCATATCACAACAGCCTGCATGC...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp AGAAAGGACAACTGGGTCACTAAGAAGTTGACAAACTGGACCAAGAGGACAGCTAAGGAGAACGTGAGTTaGCTGGGCCACGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKDNWVTKKLTNWTKRTAKENVS*LGHVSS
Trigger: GCTGCTGACGTGGCCCAGTCAACTCACGTTCTCCTT...AGCTGTCCTCTTGGTCCAGTTTGTCAACTTCTTAGTGACCCAGTTGTCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATAATCCCACAGCAAGGTaGTGGTTTTCCAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHNPTAR*WFSRTD
Trigger: ATCTGTTCTGGAAAACCATCACCTTGCTGTGGGATT...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGAGGGTCAGTTCAAACTaGAACTTCTCCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARRVSSN*NFSIRP
Trigger: AGGCCTGATGGAGAAGTTTCAGTTTGAACTGACCCT...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCAGGGTCAGTTCAAACTaGAACTTCTCCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFRVSSN*NFSIRP
Trigger: AGGCCTGATGGAGAAGTTTCAGTTTGAACTGACCCT...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTCAGGGTTCGTCAGCAGGGTaGAGTTGTTTCTTACACTTC +
Preference number: 4 (lower is better)
Translates to: SHVTTGLRVSLQGMDRTQGSSAG*SCFLHF
Trigger: GAAGTGTAAGAAACAACTTCACCCTGCTGACGAACC...CTGAGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR TCA 90 bp AAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCGGTTCGTCAGCAGGGTaGAGTTGTTTCTTACACTTC +
Preference number: 4 (lower is better)
Translates to: KARQHGTAICFTAWHSGSGSSAG*SCFLHF
Trigger: GAAGTGTAAGAAACAACTTCACCCTGCTGACGAACC...GGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTATTCTTCTTGCAGGCTaGCTCTGGAGACTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSILLAG*LWRLEP
Trigger: AGGCTCCAGTCTCCAGAGTCAGCCTGCAAGAAGAAT...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCCGAAGCGTGAGATaGTTGTGTTGTTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKLRSVR*LCCSGL
Trigger: CAAGCCTGAACAACACAAGCATCTCACGCTTCGGAG...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGCTCCGAAGCGTGAGATaGTTGTGTTGTTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQLRSVR*LCCSGL
Trigger: CAAGCCTGAACAACACAAGCATCTCACGCTTCGGAG...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACTCCGAAGCGTGAGATaGTTGTGTTGTTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SPPSLQARQDSMELLFASLRSVR*LCCSGL
Trigger: CAAGCCTGAACAACACAAGCATCTCACGCTTCGGAG...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGATCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: SAKLAGKARQHGTAICFTIMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAT...CGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGATCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARIMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAT...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCATCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFIMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAT...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATATACGATCGGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHIRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACCGATCGTAT...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCCGTTCTTTGTCTCCCTaGTGGAAAAACTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFRSLSP*WKNSSM
Trigger: CATGGAGGAGTTTTTCCAGCAGGGAGACAAAGAACG...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCACAGAAGCTGTGTaGTTATCACACATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: GKARQHGTAICFTAWHSGSTEAV*LSHIGL
Trigger: TAGCCCAATGTGTGATAAGCACACAGCTTCTGTGGA...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTTCTGCGTGGGAGATaGGATTTCCACATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKLLRGR*DFHIVL
Trigger: CAGAACGATGTGGAAATCCCATCTCCCACGCAGAAG...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGAGAAGGTCTCTTTCCTaGAATATTGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGRRSLS*NIAYMM
Trigger: CATCATGTATGCAATATTCCAGGAAAGAGACCTTCT...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAGATCGACATCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQDRHHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGATGTCGATC...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAGATCGACATCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: RQDSMELLFASRPGILAPDRHHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGATGTCGATC...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCGATCGACATCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFDRHHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGATGTCGATC...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGAGAAGGGATGAGGAGAAATCTAGGCATGGGAGATGGAGAGTACAGGTGCTCAACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GEGMRRNLGMGDGEYRCSTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...TGAGCACCTGTACTCTCCATCTCCCATGCCTAGATTTCTCCTCATCCCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp ATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGGCTCCTCTCATCCAGTaGCGGGGAAGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: MGWVVRFIDEVVSEFSHLAPLIQ*RGRALG
Trigger: CCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGC...CAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGAATCCCTGTTCTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGERIPVL*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAGAACAGGGATTCT...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGAGAATCCCTGTTCTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: QRACSSRVECSSPHRGRERIPVL*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAGAACAGGGATTCT...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAATCCCTGTTCTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: DPTTQRACSSRVECSSPHRIPVL*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAGAACAGGGATTCT...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAATCCCTGTTCTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGRIPVL*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAGAACAGGGATTCT...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTCAGGCATGGATAAGCTGGCAAGAACCTaGGCAAAAGGAGTGACAATC +
Preference number: 4 (lower is better)
Translates to: NHRVEGESSGNGPNSGMDKLART*AKGVTI
Trigger: GATTGTCACTCCTTTTGCCCAGGTTCTTGCCAGCTT...ATCCATGCCTGAGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAAAGCTGGCAAGAACCTaGGCAAAAGGAGTGACAATC +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQKLART*AKGVTI
Trigger: GATTGTCACTCCTTTTGCCCAGGTTCTTGCCAGCTT...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTTTACACTTCGCAAGCTaGCAAGAACCTGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: ARQDSMELLFASRPGILALHFAS*QEPGQK
Trigger: CTTTTGCCCAGGTTCTTGCCAGCTTGCGAAGTGTAA...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGTTGTCAAAGGTAGTGTaGTTGGCCTGGAAATGCCAT +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRLSKVV*LAWKCH
Trigger: ATGGCATTTCCAGGCCAACCACACTACCTTTGACAA...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAATGTGTTGTTCAGGCTTaGGCTGTGCATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQCVVQA*AVHQFL
Trigger: AAGAAACTGATGCACAGCTCAAGCCTGAACAACACA...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTGTGTTGTTCAGGCTTaGGCTGTGCATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARCVVQA*AVHQFL
Trigger: AAGAAACTGATGCACAGCTCAAGCCTGAACAACACA...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCTACAAAGGTGTCAGATaGGATTTTAAACGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLYKGVR*DFKRLQ
Trigger: CTGAAGACGTTTAAAATCTCATCTGACACCTTTGTA...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTGCATGCAGGCTGTTGTaGTATGCCACATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSACRLL*YATSEW
Trigger: CCATTCTGATGTGGCATATCACAACAGCCTGCATGC...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTTCTTGGTAAGATTCTaGAAGATGTCGCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: GKARQHGTAICFTAWHSGFLVRF*KMSQCS
Trigger: GGAACACTGCGACATCTTTCAGAATCTTACCAAGAA...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGGCGTCTTTGTGCTGCTaGAATAGCTGTGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAAASLCC*NSCGLL
Trigger: GAGAAGGCCACAGCTATTTCAGCAGCACAAAGACGC...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCGGTTCAGCATCCTTTTaGACTTGTTTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: GKARQHGTAICFTAWHSGGSASF*TCLKPS
Trigger: AGATGGCTTCAAACAAGTTCAAAAGGATGCTGAACC...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCATTCAGGCTTGAGCTGTaGATCAGTTTCTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: RQDSMELLFASRPGILAPFRLEL*ISFFTP
Trigger: TGGAGTGAAGAAACTGATGCACAGCTCAAGCCTGAA...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAACTCCGAAGCGTGAGATaGTTGTGTTGTTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQLRSVR*LCCSGL
Trigger: CAAGCCTGAACAACACAAGCATCTCACGCTTCGGAG...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGCACAGTGTACCATGTTaGGAAGAACCTGTATCCGGT +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQHSVPC*EEPVSG
Trigger: ACCGGATACAGGTTCTTCGCAACATGGTACACTGTG...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACGTTCTTTGTCTCCCTaGTGGAAAAACTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKRSLSP*WKNSSM
Trigger: CATGGAGGAGTTTTTCCAGCAGGGAGACAAAGAACG...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTTCCACAGAAGCTGTGTaGTTATCACACATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: ARQDSMELLFASRPGILASTEAV*LSHIGL
Trigger: TAGCCCAATGTGTGATAAGCACACAGCTTCTGTGGA...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TTQRACSSRVECSSPHRGRLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCT...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGATGTACTCAGACACCTaGTTCCCTGATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQMYSDT*FPDLLI
Trigger: GATGAGCAGATCAGGGAACCAGGTGTCTGAGTACAT...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQFTPLI*VMSCCF
Trigger: GAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAGGAGGCTCATGTGTTTaGACATATCAGTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: RQDSMELLFASRPGILAPGGSCV*TYQLPT
Trigger: TGTTGGCAACTGATATGTCCAAACACATGAGCCTCC...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGGAGGCTCATGTGTTTaGACATATCAGTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: SAKLAGKARQHGTAICFTGGSCV*TYQLPT
Trigger: TGTTGGCAACTGATATGTCCAAACACATGAGCCTCC...CGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGGTGCTTATCACACATTaGGCTAATCTCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARVLITH*ANLHSP
Trigger: AGGGGAATGGAGATTAGCCCAATGTGTGATAAGCAC...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAGTGCTTATCACACATTaGGCTAATCTCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: RQDSMELLFASRPGILAPVLITH*ANLHSP
Trigger: AGGGGAATGGAGATTAGCCCAATGTGTGATAAGCAC...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGTCAATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGESMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATTGA...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGTGGACAAGAAATGGTGAATGGGACAGGAAAGGACGGCCTGAGTATAAGGACCTCCCGAGGGTGTAACTaGAAGAGCTGTAGGATTTAC +
Preference number: 4 (lower is better)
Translates to: GGQEMVNGTGKDGLSIRTSRGCN*KSCRIY
Trigger: GTAAATCCTACAGCTCTTCCAGTTACACCCTCGGGA...GGTCCTTATACTCAGGCCGTCCTTTCCTGTCCCATTCACCATTTCTTGTCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR TCA 90 bp TTGTTAGTGAGTTCAGTCATCTGTCAGGACAGCTTCCCAACACCTAGTGCAGAGTTGGAGACTCCAGGATaGTCGACATCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: LLVSSVICQDSFPTPSAELETPG*STSWMA
Trigger: TGCCATCCATGATGTCGATCATCCTGGAGTCTCCAA...CTCTGCACTAGGTGTTGGGAAGCTGTCCTGACAGATGACTGAACTCACTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCATTCTTGGTAAGATTCTaGAAGATGTCGCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: RQDSMELLFASRPGILAPFLVRF*KMSQCS
Trigger: GGAACACTGCGACATCTTTCAGAATCTTACCAAGAA...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGTTCTTGGTAAGATTCTaGAAGATGTCGCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SAKLAGKARQHGTAICFTFLVRF*KMSQCS
Trigger: GGAACACTGCGACATCTTTCAGAATCTTACCAAGAA...CGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAGGGTCAGTTCAAACTaGAACTTCTCCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSRVSSN*NFSIRP
Trigger: AGGCCTGATGGAGAAGTTTCAGTTTGAACTGACCCT...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTGGTTCAGCATCCTTTTaGACTTGTTTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: ARQDSMELLFASRPGILAGSASF*TCLKPS
Trigger: AGATGGCTTCAAACAAGTTCAAAAGGATGCTGAACC...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GATTCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTAGCGCATCTGCTCCTTaGAAGTCTTTATGCAAACCT +
Preference number: 4 (lower is better)
Translates to: DSHVTTGLRVSLQGMDRTSASAP*KSLCKP
Trigger: AGGTTTGCATAAAGACTTTCAAGGAGCAGATGCGCT...AGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR TCA 90 bp AGATGCCCAGACAACGTGACATGGCCTGATTCCCATGTAACCACAGGGTTGAGGTCACCAGCAACTTTCTaGAAAAGCATGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: RCPDNVTWPDSHVTTGLRSPATF*KSMVNS
Trigger: GGAATTCACCATGCTTTTTCAGAAAGTTGCTGGTGA...CCTCAACCCTGTGGTTACATGGGAATCAGGCCATGTCACGTTGTCTGGGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR TCA 90 bp CGTCAGCAGGGTGAAGTTGTTTCTTACACTTCGCAAGCTGGCAAGAACCTGGGCTCACCAGCAACTTTCTaGAAAAGCATGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: RQQGEVVSYTSQAGKNLGSPATF*KSMVNS
Trigger: GGAATTCACCATGCTTTTTCAGAAAGTTGCTGGTGA...GCCCAGGTTCTTGCCAGCTTGCGAAGTGTAAGAAACAACTTCACCCTGCTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR GCA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCATTCAGGCTTGAGCTGTaGATCAGTTTCTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: SPPSLQARQDSMELLFASFRLEL*ISFFTP
Trigger: TGGAGTGAAGAAACTGATGCACAGCTCAAGCCTGAA...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTCACAGTGTACCATGTTaGGAAGAACCTGTATCCGGT +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSHSVPC*EEPVSG
Trigger: ACCGGATACAGGTTCTTCGCAACATGGTACACTGTG...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGATACGATCGGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FASRPGILAPNSSNWKGQIRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACCGATCGTAT...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CCTGATTCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAAGTTCCAAGCGCATCTaGTCCTTGAAAGTCTTTATG +
Preference number: 4 (lower is better)
Translates to: PDSHVTTGLRVSLQGMDRSSKRI*SLKVFM
Trigger: CATAAAGACTTTCAAGGAGCAGATGCGCTTGGAACT...TCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGAATCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR GCA 90 bp GTTGCTCACTGGGAAGTGATGAGTTCCTGGACATCGCTTTTGGTGACAAGTCATGACGCCGCTGTCGGATaGTTTTATTCACCAGCAACT +
Preference number: 4 (lower is better)
Translates to: VAHWEVMSSWTSLLVTSHDAAVG*FYSPAT
Trigger: AGTTGCTGGTGAATAAAAGCATCCGACAGCGGCGTC...ATGACTTGTCACCAAAAGCGATGTCCAGGAACTCATCACTTCCCAGTGAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR GCA 90 bp GATTCCCATGTAACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTATCTCTTGCTCTCTCTaGATTTCGTCAGTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: DSHVTTGLRVSLQGMDRTISCSL*ISSVSC
Trigger: ACAGGAGACTGACGAAATGCAGAGAGAGCAAGAGAT...AGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTTACATGGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAATGTACTCAGACACCTaGTTCCCTGATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQMYSDT*FPDLLI
Trigger: GATGAGCAGATCAGGGAACCAGGTGTCTGAGTACAT...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGAAGGTCTCTTTCCTaGAATATTGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: LSGHARQGWNVHLHTEGERRSLS*NIAYMM
Trigger: CATCATGTATGCAATATTCCAGGAAAGAGACCTTCT...CTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGATTTTCCTGAGTGTCTaGCGTTGCTTCTTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARIFLSV*RCFLVR
Trigger: TCTTACCAAGAAGCAACGCCAGACACTCAGGAAAAT...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTATTTTCCTGAGTGTCTaGCGTTGCTTCTTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: ARQDSMELLFASRPGILAIFLSV*RCFLVR
Trigger: TCTTACCAAGAAGCAACGCCAGACACTCAGGAAAAT...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAATTTTCCTGAGTGTCTaGCGTTGCTTCTTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: RQDSMELLFASRPGILAPIFLSV*RCFLVR
Trigger: TCTTACCAAGAAGCAACGCCAGACACTCAGGAAAAT...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGAGAAGGGATGAGGAGAAATCTAGGCATGGGAGATGGAGAGTACAGGTGCTCAGGAGGCTCATGTGTTTaGACATATCAGTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: GEGMRRNLGMGDGEYRCSGGSCV*TYQLPT
Trigger: TGTTGGCAACTGATATGTCCAAACACATGAGCCTCC...TGAGCACCTGTACTCTCCATCTCCCATGCCTAGATTTCTCCTCATCCCTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCAGGAGGCTCATGTGTTTaGACATATCAGTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: SPPSLQARQDSMELLFASGGSCV*TYQLPT
Trigger: TGTTGGCAACTGATATGTCCAAACACATGAGCCTCC...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGATTCCAAGGACTTGGTaGGGTTGCTCAGGTCTGCAC +
Preference number: 4 (lower is better)
Translates to: RMFSRAHELNSSVDEDIRIPRTW*GCSGLH
Trigger: GTGCAGACCTGAGCAACCCCACCAAGTCCTTGGAAT...CCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAAGAATCCCTGTTCTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQRIPVL*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAGAACAGGGATTCT...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTTTACACTTCGCAAGCTaGCAAGAACCTGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSLHFAS*QEPGQK
Trigger: CTTTTGCCCAGGTTCTTGCCAGCTTGCGAAGTGTAA...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGTACAAAGGTGTCAGATaGGATTTTAAACGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRYKGVR*DFKRLQ
Trigger: CTGAAGACGTTTAAAATCTCATCTGACACCTTTGTA...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAAATCCCACAGCAAGGTaGTGGTTTTCCAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQNPTAR*WFSRTD
Trigger: ATCTGTTCTGGAAAACCATCACCTTGCTGTGGGATT...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTCCTCTTGTAGCAATTTaGATCCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSPLVAI*IPQQGD
Trigger: ATCACCTTGCTGTGGGATTCAAATTGCTACAAGAGG...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAACCTCTTGTAGCAATTTaGATCCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQPLVAI*IPQQGD
Trigger: ATCACCTTGCTGTGGGATTCAAATTGCTACAAGAGG...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CTGCTGATGGGGCTCCATGTTTCTCTTAAGCAATGTCTGGGATATATAATACACCCTGGGCAAAAGGAGTaGCAATCAGGTCATCGCCGT +
Preference number: 4 (lower is better)
Translates to: LLMGLHVSLKQCLGYIIHPGQKE*QSGHRR
Trigger: ACGGCGATGACCTGATTGTCACTCCTTTTGCCCAGG...GTGTATTATATATCCCAGACATTGCTTAAGAGAAACATGGAGCCCCATCAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR TCA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCATCCATTGCTAGTTTCTaGTATGATTCTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: RQDSMELLFASRPGILAPSIASF*YDSSCR
Trigger: CCTGCAAGAAGAATCATATCAGAAACTAGCAATGGA...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TTGTTAGTGAGTTCAGTCATCTGTCAGGACAGCTTCCCAACACCTAGTGCAGAGATCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LLVSSVICQDSFPTPSAEIMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAT...CTCTGCACTAGGTGTTGGGAAGCTGTCCTGACAGATGACTGAACTCACTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAATACGATCGGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQIRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACCGATCGTAT...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GCTTCCCAACACCTAGTGCAGAGCAATCTCTCAGCTTTGTGTCCTCTGTTTTCACGTTCTTTGTCTCCCTaGTGGAAAAACTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: ASQHLVQSNLSALCPLFSRSLSP*WKNSSM
Trigger: CATGGAGGAGTTTTTCCAGCAGGGAGACAAAGAACG...TGAAAACAGAGGACACAAAGCTGAGAGATTGCTCTGCACTAGGTGTTGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTTCCACAGAAGCTGTGTaGTTATCACACATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSSTEAV*LSHIGL
Trigger: TAGCCCAATGTGTGATAAGCACACAGCTTCTGTGGA...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTAGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: ARQDSMELLFASRPGILARLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCT...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: KARQHGTAICFTAWHSGSRLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCT...GGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCAAATTCCTTGGTGAACTaGGTGGAGAAATTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: SPPSLQARQDSMELLFASNSLVN*VEKFWE
Trigger: CTCCCAAAATTTCTCCACGCAGTTCACCAAGGAATT...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR GCA 90 bp GGCCATTTTCCACATCAAAGCATATCCAGGAGTGTCTCCTGGGAGGAGGCAAGTAATTCCTTGGTGAACTaGGTGGAGAAATTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GHFPHQSISRSVSWEEASNSLVN*VEKFWE
Trigger: CTCCCAAAATTTCTCCACGCAGTTCACCAAGGAATT...ACTTGCCTCCTCCCAGGAGACACTCCTGGATATGCTTTGATGTGGAAAATGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR GCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGAGGTCATCGCCGTGTTaGTCACTGGGAAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQRSSPC*SLGSDE
Trigger: CTCATCACTTCCCAGTGAGCAACACGGCGATGACCT...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCCCTGTCCTTCTGCGTaGGAGATGGGATTTCCACAT +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQPCPSA*EMGFPH
Trigger: ATGTGGAAATCCCATCTCCCACGCAGAAGGACAGGG...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGAGAAGGTCTCTTTCCTaGAATATTGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRRRSLS*NIAYMM
Trigger: CATCATGTATGCAATATTCCAGGAAAGAGACCTTCT...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GGAGAAGGGATGAGGAGAAATCTAGGCATGGGAGATGGAGAGTACAGGTGCTCAATTTTCCTGAGTGTCTaGCGTTGCTTCTTGGTAAGA +
Preference number: 4 (lower is better)
Translates to: GEGMRRNLGMGDGEYRCSIFLSV*RCFLVR
Trigger: TCTTACCAAGAAGCAACGCCAGACACTCAGGAAAAT...TGAGCACCTGTACTCTCCATCTCCCATGCCTAGATTTCTCCTCATCCCTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGGAGGCTCATGTGTTTaGACATATCAGTTGCCAACA +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQGGSCV*TYQLPT
Trigger: TGTTGGCAACTGATATGTCCAAACACATGAGCCTCC...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTGTGCTTATCACACATTaGGCTAATCTCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSVLITH*ANLHSP
Trigger: AGGGGAATGGAGATTAGCCCAATGTGTGATAAGCAC...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTCAATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARSMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATTGA...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GAAGCTTCACATTGCGTCATTTACGACATCAGTTCACATTCTACGATAAAAATTGCTCCTCTCATCCAGTaGCGGGGAAGGGCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: EASHCVIYDISSHSTIKIAPLIQ*RGRALG
Trigger: CCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGC...AATTTTTATCGTAGAATGTGAACTGATGTCGTAAATGACGCAATGTGAAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CCA 90 bp TGGCAGACAATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCTTCTCCATCAGGCCTTaGCAGTCCCTGCTCCTCTCA +
Preference number: 4 (lower is better)
Translates to: WQTMGWVVRFIDEVVSEFFSIRP*QSLLLS
Trigger: TGAGAGGAGCAGGGACTGCCAAGGCCTGATGGAGAA...GAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCATTGTCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDGLRVQ*APTWRR
Trigger: CCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCC...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR CCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATAACGACTCCCTGCGCTaGCTGTGCCCAGGAAAGGCG +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDNDSLR*LCPGKA
Trigger: CGCCTTTCCTGGGCACAGCCAGCGCAGGGAGTCGTT...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR CCA 90 bp GGACAAGAAATGGTGAATGGGACAGGAAAGGACGGCCTGAGTATAAGGACCTCATTGTCAAAGGTAGTGTaGTTGGCCTGGAAATGCCAT +
Preference number: 4 (lower is better)
Translates to: GQEMVNGTGKDGLSIRTSLSKVV*LAWKCH
Trigger: ATGGCATTTCCAGGCCAACCACACTACCTTTGACAA...TGAGGTCCTTATACTCAGGCCGTCCTTTCCTGTCCCATTCACCATTTCTTGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR TCA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTACAAAGGTGTCAGATaGGATTTTAAACGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFYKGVR*DFKRLQ
Trigger: CTGAAGACGTTTAAAATCTCATCTGACACCTTTGTA...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTTACAAAGGTGTCAGATaGGATTTTAAACGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: ARQDSMELLFASRPGILAYKGVR*DFKRLQ
Trigger: CTGAAGACGTTTAAAATCTCATCTGACACCTTTGTA...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TGCTTAATACCTCACTTGAGAGCCCATGCGTGGAGAAAGCAAAGGAATGATACAGCATGCAGGCTGTTGTaGTATGCCACATCAGAATGG +
Preference number: 4 (lower is better)
Translates to: CLIPHLRAHAWRKQRNDTACRLL*YATSEW
Trigger: CCATTCTGATGTGGCATATCACAACAGCCTGCATGC...TGTATCATTCCTTTGCTTTCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGTTGGAGACTCCAGGATaGTCGACATCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQLETPG*STSWMA
Trigger: TGCCATCCATGATGTCGATCATCCTGGAGTCTCCAA...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp ATTGTCTTCTTGTTGCCTTTGATGAATTTGAACATGGCTCCACTGCTCGTGAGCTTGGAGACTCCAGGATaGTCGACATCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: IVFLLPLMNLNMAPLLVSLETPG*STSWMA
Trigger: TGCCATCCATGATGTCGATCATCCTGGAGTCTCCAA...GCTCACGAGCAGTGGAGCCATGTTCAAATTCATCAAAGGCAACAAGAAGACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR TCA 90 bp GCTTCCCAACACCTAGTGCAGAGCAATCTCTCAGCTTTGTGTCCTCTGTTTTCACCTCTTGTAGCAATTTaGATCCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: ASQHLVQSNLSALCPLFSPLVAI*IPQQGD
Trigger: ATCACCTTGCTGTGGGATTCAAATTGCTACAAGAGG...TGAAAACAGAGGACACAAAGCTGAGAGATTGCTCTGCACTAGGTGTTGGGAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGCCTCTTGTAGCAATTTaGATCCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAAPLVAI*IPQQGD
Trigger: ATCACCTTGCTGTGGGATTCAAATTGCTACAAGAGG...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTTTCTTGGTAAGATTCTaGAAGATGTCGCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSFLVRF*KMSQCS
Trigger: GGAACACTGCGACATCTTTCAGAATCTTACCAAGAA...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTCCATTGCTAGTTTCTaGTATGATTCTTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARSIASF*YDSSGN
Trigger: GTTTCCAGAAGAATCATATCAGAAACTAGCAATGGA...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097950.9
CDS-3UTR TCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTGGTTCAGCATCCTTTTaGACTTGTTTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSGSASF*TCLKPS
Trigger: AGATGGCTTCAAACAAGTTCAAAAGGATGCTGAACC...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GTTGCTCACTGGGAAGTGATGAGTTCCTGGACATCGCTTTTGGTGACAAGTCATAGCGCATCTGCTCCTTaGAAGTCTTTATGCAAACCT +
Preference number: 4 (lower is better)
Translates to: VAHWEVMSSWTSLLVTSHSASAP*KSLCKP
Trigger: AGGTTTGCATAAAGACTTTCAAGGAGCAGATGCGCT...ATGACTTGTCACCAAAAGCGATGTCCAGGAACTCATCACTTCCCAGTGAGCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR TCA 90 bp TGTGCCATTTTCTTTAACTATTGTCACAATGCTGAACTGAAGCATGACACGTATATGTATGAGCCACCGTaGAGCGACGCCGCTGTCGGA +
Preference number: 4 (lower is better)
Translates to: CAIFFNYCHNAELKHDTYMYEPP*SDAAVG
Trigger: TCCGACAGCGGCGTCGCTTCACGGTGGCTCATACAT...ATACGTGTCATGCTTCAGTTCAGCATTGTGACAATAGTTAAAGAAAATGGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR TCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGGGACATCGCTTTTGGTaGCAAGTCATAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQGHRFW*QVIVAV
Trigger: GACAGCGACTATGACTTGTCACCAAAAGCGATGTCC...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TCCTCTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATCTCCGAAGCGTGAGATaGTTGTGTTGTTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSVFKPFSFDGNWPLLPHLRSVR*LCCSGL
Trigger: CAAGCCTGAACAACACAAGCATCTCACGCTTCGGAG...ATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CATAGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCCTCCGAAGCGTGAGATaGTTGTGTTGTTCAGGCTTG +
Preference number: 4 (lower is better)
Translates to: HRMFSRAHELNSSVDEDILRSVR*LCCSGL
Trigger: CAAGCCTGAACAACACAAGCATCTCACGCTTCGGAG...GATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR GCA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGATACGATCGGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAAIRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACCGATCGTAT...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AATGACTCATCATCTGTAAGAAAGGCCACTGAAATTGCTAGGGCCTTGAGGAGTCAAGCTGGCAAGAACTaGTCACTGGGAAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: NDSSSVRKATEIARALRSQAGKN*SLGSDE
Trigger: CTCATCACTTCCCAGTGAGCAGTTCTTGCCAGCTTG...ACTCCTCAAGGCCCTAGCAATTTCAGTGGCCTTTCTTACAGATGATGAGTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR CCA 90 bp CATAGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCCTTCTGCGTGGGAGATaGGATTTCCACATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: HRMFSRAHELNSSVDEDILLRGR*DFHIVL
Trigger: CAGAACGATGTGGAAATCCCATCTCCCACGCAGAAG...GATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCTATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp AGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGTTCACTCCACTTATCTaGGTCATGAGCTGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RMFSRAHELNSSVDEDIRFTPLI*VMSCCF
Trigger: GAAGCAGCAGCTCATGACCCAGATAAGTGGAGTGAA...CCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp GTTTGCTTGCCTTGCCTTACACTGGGAAGATACTTTGGCCACATTGTAAAGGTGGATCGACATCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: VCLPCLTLGRYFGHIVKVDRHHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGATGTCGATC...CACCTTTACAATGTGGCCAAAGTATCTTCCCAGTGTAAGGCAAGGCAAGCAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTGTTAGTGAGTTCAGTCATCTGTCAGGACAGCTTCCCAACACCTAGTGCAGAGGTGCTTATCACACATTaGGCTAATCTCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LLVSSVICQDSFPTPSAEVLITH*ANLHSP
Trigger: AGGGGAATGGAGATTAGCCCAATGTGTGATAAGCAC...CTCTGCACTAGGTGTTGGGAAGCTGTCCTGACAGATGACTGAACTCACTAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CACTGCCTTCTGATTGGCTCCTGGAGAAACGTCAGCAACAAGTATTTACAGATGTTACACTTCGCAAGCTaGCAAGAACCTGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: HCLLIGSWRNVSNKYLQMLHFAS*QEPGQK
Trigger: CTTTTGCCCAGGTTCTTGCCAGCTTGCGAAGTGTAA...CATCTGTAAATACTTGTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATGCTGACTCTGGAGACTaGAGCCTGACTAGCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDADSGD*SLTSRW
Trigger: CCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGC...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR CAA 72 bp GGGAAACATCAGCTTTTCCACAGACCTCCTGGTGTGTaGAGCATGAGTTTAAAGCAAAGCAGAGAGACTTGC +
Preference number: 4 (lower is better)
Translates to: GKHQLFHRPPGV*SMSLKQSRETC
Trigger: GCAAGTCTCTCTGCTTTGCTTTAAACTCATGCTCAACACACCAGGAGGTCTGTGGAAAAGCTGATGTTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
3UTR CAA 72 bp ACTGTGACTCTCATGACTCCCATACTGCACCTTTCCTaGGGGAGGGAATATGGATTTGAGCTGGAGATGATT +
Preference number: 4 (lower is better)
Translates to: TVTLMTPILHLS*GREYGFELEMI
Trigger: AATCATCTCCAGCTCAAATCCATATTCCCTCCCCAAGGAAAGGTGCAGTATGGGAGTCATGAGAGTCACAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR TCA 90 bp ACTGGGAAGATACTTTGGCCACATTGTAAAGGTGGGTCTTTTTCTCATCTGAAACCTCATTTTCCGTGTTaGCTCCGAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: TGKILWPHCKGGSFSHLKPHFPC*LRSVRC
Trigger: GCATCTCACGCTTCGGAGTCAACACGGAAAATGAGG...TTTCAGATGAGAAAAAGACCCACCTTTACAATGTGGCCAAAGTATCTTCCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp ATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGCCTCATTTTCCGTGTTaGCTCCGAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: MGWVVRFIDEVVSEFSHLPHFPC*LRSVRC
Trigger: GCATCTCACGCTTCGGAGTCAACACGGAAAATGAGG...CAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTGTTAGTGAGTTCAGTCATCTGTCAGGACAGCTTCCCAACACCTAGTGCAGAGTTCTTGGTAAGATTCTaGAAGATGTCGCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLVSSVICQDSFPTPSAEFLVRF*KMSQCS
Trigger: GGAACACTGCGACATCTTTCAGAATCTTACCAAGAA...CTCTGCACTAGGTGTTGGGAAGCTGTCCTGACAGATGACTGAACTCACTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGAGGGTCAGTTCAAACTaGAACTTCTCCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQRVSSN*NFSIRP
Trigger: AGGCCTGATGGAGAAGTTTCAGTTTGAACTGACCCT...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATTCTCCACTTGCAGGCTaGCTCTGGAGACTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDSPLAG*LWRLEP
Trigger: AGGCTCCAGTCTCCAGAGTCAGCCTGCAAGTGGAGA...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR GCA 90 bp AAAACGAAAGCCACAATTAGAGCAGAGCCCAGTGACAAACTCAACTCATGCATCCACAGTGTACCATGTTaGGAAGAACCTGTATCCGGT +
Preference number: 4 (lower is better)
Translates to: KTKATIRAEPSDKLNSCIHSVPC*EEPVSG
Trigger: ACCGGATACAGGTTCTTCGCAACATGGTACACTGTG...GATGCATGAGTTGAGTTTGTCACTGGGCTCTGCTCTAATTGTGGCTTTCGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR GCA 90 bp CATAGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCCGTTCTTTGTCTCCCTaGTGGAAAAACTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: HRMFSRAHELNSSVDEDIRSLSP*WKNSSM
Trigger: CATGGAGGAGTTTTTCCAGCAGGGAGACAAAGAACG...GATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR GCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCGTTCTTTGTCTCCCTaGTGGAAAAACTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQRSLSP*WKNSSM
Trigger: CATGGAGGAGTTTTTCCAGCAGGGAGACAAAGAACG...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAAGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQRLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCT...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSRLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCT...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TCCTCTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATATGTACTCAGACACCTaGTTCCCTGATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SSVFKPFSFDGNWPLLPHMYSDT*FPDLLI
Trigger: GATGAGCAGATCAGGGAACCAGGTGTCTGAGTACAT...ATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CATAGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCATGTACTCAGACACCTaGTTCCCTGATCTGCTCATC +
Preference number: 4 (lower is better)
Translates to: HRMFSRAHELNSSVDEDIMYSDT*FPDLLI
Trigger: GATGAGCAGATCAGGGAACCAGGTGTCTGAGTACAT...GATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCAAGAAGGTCTCTTTCCTaGAATATTGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: SPPSLQARQDSMELLFASRRSLS*NIAYMM
Trigger: CATCATGTATGCAATATTCCAGGAAAGAGACCTTCT...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAATCAATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQSMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATTGA...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTTCAATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSSMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATTGA...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp GCTTCCCAACACCTAGTGCAGAGCAATCTCTCAGCTTTGTGTCCTCTGTTTTCAAGAATCCCTGTTCTCTaGATCAATCACACAAAGCGT +
Preference number: 4 (lower is better)
Translates to: ASQHLVQSNLSALCPLFSRIPVL*INHTKR
Trigger: ACGCTTTGTGTGATTGATCCAGAGAACAGGGATTCT...TGAAAACAGAGGACACAAAGCTGAGAGATTGCTCTGCACTAGGTGTTGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATCAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCAC +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDQWAPT*RRAIFH
Trigger: GTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTG...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR CAA 72 bp GGCTCACATGAAATGAAAAAGCAGGGAGCAGACAGATaGCACACAGGACTTAGTGTTGAAGAAAAACAGGGC +
Preference number: 4 (lower is better)
Translates to: GSHEMKKQGADR*HTGLSVEEKQG
Trigger: GCCCTGTTTTTCTTCAACACTAAGTCCTGTGTGCAATCTGTCTGCTCCCTGCTTTTTCATTTCATGTGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
3UTR CAA 72 bp CCTGGACAATGTTCTCTGAGAATCCTTATGGACATCTaGCAGGTACTCAAGGGCTGTGGTTGGATGTTAGTT +
Preference number: 4 (lower is better)
Translates to: PGQCSLRILMDI*QVLKGCGWMLV
Trigger: AACTAACATCCAACCACAGCCCTTGAGTACCTGCAAGATGTCCATAAGGATTCTCAGAGAACATTGTCCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR TCA 90 bp TGCTTAATACCTCACTTGAGAGCCCATGCGTGGAGAAAGCAAAGGAATGATACATGTGTTGTTCAGGCTTaGGCTGTGCATCAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: CLIPHLRAHAWRKQRNDTCVVQA*AVHQFL
Trigger: AAGAAACTGATGCACAGCTCAAGCCTGAACAACACA...TGTATCATTCCTTTGCTTTCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp TCTTCCAAGTCAGTAGTTTGGGGATACTCAGTATCATCTGTGATCAAATGTAGTCCTCATTTTCCGTGTTaGCTCCGAAGCGTGAGATGC +
Preference number: 4 (lower is better)
Translates to: SSKSVVWGYSVSSVIKCSPHFPC*LRSVRC
Trigger: GCATCTCACGCTTCGGAGTCAACACGGAAAATGAGG...ACTACATTTGATCACAGATGATACTGAGTATCCCCAAACTACTGACTTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR TCA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAATACAAAGGTGTCAGATaGGATTTTAAACGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQYKGVR*DFKRLQ
Trigger: CTGAAGACGTTTAAAATCTCATCTGACACCTTTGTA...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GTGTCCACCAAATCTGATGAGGTCTTAGATAACTGGAAACTTTGCTTAATACCTGTAGAAAGGAGAACGTaGGTTGACTGGGCCACGTCA +
Preference number: 4 (lower is better)
Translates to: VSTKSDEVLDNWKLCLIPVERRT*VDWATS
Trigger: TGACGTGGCCCAGTCAACTCACGTTCTCCTTTCTAC...AGGTATTAAGCAAAGTTTCCAGTTATCTAAGACCTCATCAGATTTGGTGGACAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp CATAGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAATCCCACAGCAAGGTaGTGGTTTTCCAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: HRMFSRAHELNSSVDEDINPTAR*WFSRTD
Trigger: ATCTGTTCTGGAAAACCATCACCTTGCTGTGGGATT...GATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp ATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGACACCTCTTGTAGCAATTTaGATCCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: MFSRAHELNSSVDEDIRTPLVAI*IPQQGD
Trigger: ATCACCTTGCTGTGGGATTCAAATTGCTACAAGAGG...TGTCCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp GTTTGCTTGCCTTGCCTTACACTGGGAAGATACTTTGGCCACATTGTAAAGGTGTTCTTGGTAAGATTCTaGAAGATGTCGCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: VCLPCLTLGRYFGHIVKVFLVRF*KMSQCS
Trigger: GGAACACTGCGACATCTTTCAGAATCTTACCAAGAA...CACCTTTACAATGTGGCCAAAGTATCTTCCCAGTGTAAGGCAAGGCAAGCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp AAAACGAAAGCCACAATTAGAGCAGAGCCCAGTGACAAACTCAACTCATGCATCAGCGCATCTGCTCCTTaGAAGTCTTTATGCAAACCT +
Preference number: 4 (lower is better)
Translates to: KTKATIRAEPSDKLNSCISASAP*KSLCKP
Trigger: AGGTTTGCATAAAGACTTTCAAGGAGCAGATGCGCT...GATGCATGAGTTGAGTTTGTCACTGGGCTCTGCTCTAATTGTGGCTTTCGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR TCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATCCTGGGCAAAAGGAGTaGCAATCAGGTCATCGCCGT +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDPGQKE*QSGHRR
Trigger: ACGGCGATGACCTGATTGTCACTCCTTTTGCCCAGG...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR GCA 90 bp ATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGACATTCAGGCTTGAGCTGTaGATCAGTTTCTTCACTCCA +
Preference number: 4 (lower is better)
Translates to: MFSRAHELNSSVDEDIRTFRLEL*ISFFTP
Trigger: TGGAGTGAAGAAACTGATGCACAGCTCAAGCCTGAA...TGTCCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR GCA 90 bp AGTACAGGTGCTCATGTGTCCACCAAATCTGATGAGGTCTTAGATAACTGGAAAATCATGGATGGCAGCTaGAAAAATGGCAGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: STGAHVSTKSDEVLDNWKIMDGS*KNGSQD
Trigger: ATCCTGGCTGCCATTTTTGCAGCTGCCATCCATGAT...TTTCCAGTTATCTAAGACCTCATCAGATTTGGTGGACACATGAGCACCTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR GCA 90 bp AGTACAGGTGCTCATGTGTCCACCAAATCTGATGAGGTCTTAGATAACTGGAAACACAGTGTACCATGTTaGGAAGAACCTGTATCCGGT +
Preference number: 4 (lower is better)
Translates to: STGAHVSTKSDEVLDNWKHSVPC*EEPVSG
Trigger: ACCGGATACAGGTTCTTCGCAACATGGTACACTGTG...TTTCCAGTTATCTAAGACCTCATCAGATTTGGTGGACACATGAGCACCTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR GCA 90 bp TGGCAGACAATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCCGTTCTTTGTCTCCCTaGTGGAAAAACTCCTCCATG +
Preference number: 4 (lower is better)
Translates to: WQTMGWVVRFIDEVVSEFRSLSP*WKNSSM
Trigger: CATGGAGGAGTTTTTCCAGCAGGGAGACAAAGAACG...GAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCATTGTCTGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp ATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGACATCCACAGAAGCTGTGTaGTTATCACACATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: MFSRAHELNSSVDEDIRTSTEAV*LSHIGL
Trigger: TAGCCCAATGTGTGATAAGCACACAGCTTCTGTGGA...TGTCCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAGAAGGTCTCTTTCCTaGAATATTGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: SMELLFASRPGILAPNSSRRSLS*NIAYMM
Trigger: CATCATGTATGCAATATTCCAGGAAAGAGACCTTCT...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CGTATTTTACAAACTGAAACTGACACCAGGAAGAGGCCTGACAAGTGTTATCAGGATCGACATCATGGATaGCAGCTGCAAAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: RILQTETDTRKRPDKCYQDRHHG*QLQKWQ
Trigger: CTGCCATTTTTGCAGCTGCCATCCATGATGTCGATC...CTGATAACACTTGTCAGGCCTCTTCCTGGTGTCAGTTTCAGTTTGTAAAATACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CCA 90 bp TGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGTCAGGAACAATTCCAAGGACTTaGTGGGGTTGCTCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: WVVRFIDEVVSEFSHLSGTIPRT*WGCSGL
Trigger: CAGACCTGAGCAACCCCACCAAGTCCTTGGAATTGT...TCCTGACAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGGTGCTTATCACACATTaGGCTAATCTCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQVLITH*ANLHSP
Trigger: AGGGGAATGGAGATTAGCCCAATGTGTGATAAGCAC...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp GTGTCCACCAAATCTGATGAGGTCTTAGATAACTGGAAACTTTGCTTAATACCTTTGGAGACTCCAGGATaGTCGACATCATGGATGGCA +
Preference number: 4 (lower is better)
Translates to: VSTKSDEVLDNWKLCLIPLETPG*STSWMA
Trigger: TGCCATCCATGATGTCGATCATCCTGGAGTCTCCAA...AGGTATTAAGCAAAGTTTCCAGTTATCTAAGACCTCATCAGATTTGGTGGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp TGGCAGACAATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAATCCCACAGCAAGGTaGTGGTTTTCCAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: WQTMGWVVRFIDEVVSEFNPTAR*WFSRTD
Trigger: ATCTGTTCTGGAAAACCATCACCTTGCTGTGGGATT...GAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCATTGTCTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CGTATTTTACAAACTGAAACTGACACCAGGAAGAGGCCTGACAAGTGTTATCAGCCTCTTGTAGCAATTTaGATCCCACAGCAAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RILQTETDTRKRPDKCYQPLVAI*IPQQGD
Trigger: ATCACCTTGCTGTGGGATTCAAATTGCTACAAGAGG...CTGATAACACTTGTCAGGCCTCTTCCTGGTGTCAGTTTCAGTTTGTAAAATACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR TCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGTTCTTGGTAAGATTCTaGAAGATGTCGCAGTGTTCC +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQFLVRF*KMSQCS
Trigger: GGAACACTGCGACATCTTTCAGAATCTTACCAAGAA...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp AGTACAGGTGCTCATGTGTCCACCAAATCTGATGAGGTCTTAGATAACTGGAAAATACGATCGGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: STGAHVSTKSDEVLDNWKIRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACCGATCGTAT...TTTCCAGTTATCTAAGACCTCATCAGATTTGGTGGACACATGAGCACCTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR GCA 90 bp CTGCCTTCTGATTGGCTCCTGGAGAAACGTCAGCAACAAGTATTTACAGATGATAATTCCTTGGTGAACTaGGTGGAGAAATTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LPSDWLLEKRQQQVFTDDNSLVN*VEKFWE
Trigger: CTCCCAAAATTTCTCCACGCAGTTCACCAAGGAATT...ATCATCTGTAAATACTTGTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR GCA 90 bp TGTGCCATTTTCTTTAACTATTGTCACAATGCTGAACTGAAGCATGACACGTATAGGTCATCGCCGTGTTaGTCACTGGGAAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: CAIFFNYCHNAELKHDTYRSSPC*SLGSDE
Trigger: CTCATCACTTCCCAGTGAGCAACACGGCGATGACCT...ATACGTGTCATGCTTCAGTTCAGCATTGTGACAATAGTTAAAGAAAATGGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR GCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATAGGTCATCGCCGTGTTaGTCACTGGGAAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDRSSPC*SLGSDE
Trigger: CTCATCACTTCCCAGTGAGCAACACGGCGATGACCT...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR CCA 90 bp TGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGTCAGGATCCCGAGGGTGTAACTaGAAGAGCTGTAGGATTTAC +
Preference number: 4 (lower is better)
Translates to: WVVRFIDEVVSEFSHLSGSRGCN*KSCRIY
Trigger: GTAAATCCTACAGCTCTTCCAGTTACACCCTCGGGA...TCCTGACAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp ATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGAATCCCACAGCAAGGTaGTGGTTTTCCAGAACAGAT +
Preference number: 4 (lower is better)
Translates to: MGWVVRFIDEVVSEFSHLNPTAR*WFSRTD
Trigger: ATCTGTTCTGGAAAACCATCACCTTGCTGTGGGATT...CAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CTGCTGATGGGGCTCCATGTTTCTCTTAAGCAATGTCTGGGATATATAATACACTCACCAGCAACTTTCTaGAAAAGCATGGTGAATTCC +
Preference number: 4 (lower is better)
Translates to: LLMGLHVSLKQCLGYIIHSPATF*KSMVNS
Trigger: GGAATTCACCATGCTTTTTCAGAAAGTTGCTGGTGA...GTGTATTATATATCCCAGACATTGCTTAAGAGAAACATGGAGCCCCATCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR TCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATGGACATCGCTTTTGGTaGCAAGTCATAGTCGCTGTC +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDGHRFW*QVIVAV
Trigger: GACAGCGACTATGACTTGTCACCAAAAGCGATGTCC...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR TCA 90 bp TCTTCCAAGTCAGTAGTTTGGGGATACTCAGTATCATCTGTGATCAAATGTAGTGGTTCGTCAGCAGGGTaGAGTTGTTTCTTACACTTC +
Preference number: 4 (lower is better)
Translates to: SSKSVVWGYSVSSVIKCSGSSAG*SCFLHF
Trigger: GAAGTGTAAGAAACAACTTCACCCTGCTGACGAACC...ACTACATTTGATCACAGATGATACTGAGTATCCCCAAACTACTGACTTGGAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR TCA 90 bp TCCTCTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATTCCATTGCTAGTTTCTaGTATGATTCTTCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSVFKPFSFDGNWPLLPHSIASF*YDSSCR
Trigger: CCTGCAAGAAGAATCATATCAGAAACTAGCAATGGA...ATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGTCAGGATCCACAGAAGCTGTGTaGTTATCACACATTGGGCTA +
Preference number: 4 (lower is better)
Translates to: WVVRFIDEVVSEFSHLSGSTEAV*LSHIGL
Trigger: TAGCCCAATGTGTGATAAGCACACAGCTTCTGTGGA...TCCTGACAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp CGTATTTTACAAACTGAAACTGACACCAGGAAGAGGCCTGACAAGTGTTATCAGAGTTCCAAGCGCATCTaGTCCTTGAAAGTCTTTATG +
Preference number: 4 (lower is better)
Translates to: RILQTETDTRKRPDKCYQSSKRI*SLKVFM
Trigger: CATAAAGACTTTCAAGGAGCAGATGCGCTTGGAACT...CTGATAACACTTGTCAGGCCTCTTCCTGGTGTCAGTTTCAGTTTGTAAAATACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CCA 90 bp GAAGCTTCACATTGCGTCATTTACGACATCAGTTCACATTCTACGATAAAAATTCCCTGTCCTTCTGCGTaGGAGATGGGATTTCCACAT +
Preference number: 4 (lower is better)
Translates to: EASHCVIYDISSHSTIKIPCPSA*EMGFPH
Trigger: ATGTGGAAATCCCATCTCCCACGCAGAAGGACAGGG...AATTTTTATCGTAGAATGTGAACTGATGTCGTAAATGACGCAATGTGAAGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CCA 90 bp ACTGGGAAGATACTTTGGCCACATTGTAAAGGTGGGTCTTTTTCTCATCTGAAAGTGCTTATCACACATTaGGCTAATCTCCATTCCCCT +
Preference number: 4 (lower is better)
Translates to: TGKILWPHCKGGSFSHLKVLITH*ANLHSP
Trigger: AGGGGAATGGAGATTAGCCCAATGTGTGATAAGCAC...TTTCAGATGAGAAAAAGACCCACCTTTACAATGTGGCCAAAGTATCTTCCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATTGGGTTCCTCTTTTCTaGCTGCAAGTCCCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDWVPLF*LQVPFF
Trigger: GAAGAAGGGGACTTGCAGCCAGAAAAGAGGAACCCA...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
3UTR CAA 72 bp GTCTTAGATAACTGGAAACTTTGCTTAATACCTCACTaGAGAGCCCATGCGTGGAGAAAGCAAAGGAATGAT +
Preference number: 4 (lower is better)
Translates to: VLDNWKLCLIPH*RAHAWRKQRND
Trigger: ATCATTCCTTTGCTTTCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGCAAAGTTTCCAGTTATCTAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGTACAAAGGTGTCAGATaGGATTTTAAACGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQYKGVR*DFKRLQ
Trigger: CTGAAGACGTTTAAAATCTCATCTGACACCTTTGTA...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR TCA 90 bp CATAGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCTACAAAGGTGTCAGATaGGATTTTAAACGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HRMFSRAHELNSSVDEDIYKGVR*DFKRLQ
Trigger: CTGAAGACGTTTAAAATCTCATCTGACACCTTTGTA...GATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR TCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATGGTTCGTCAGCAGGGTaGAGTTGTTTCTTACACTTC +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDGSSAG*SCFLHF
Trigger: GAAGTGTAAGAAACAACTTCACCCTGCTGACGAACC...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR TCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATCGGATGCTTCCCCTTTaGTTTTTCTTGAGCTGGGTT +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDRMLPL*FFLSWV
Trigger: AACCCAGCTCAAGAAAAATCAAAGGGGAAGCATCCG...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR GCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATTCATTTCTCTCCACTTaGAGGCTGACTCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDSFLST*RLTLET
Trigger: AGTCTCCAGAGTCAGCCTGCAAGTGGAGAGAAATGA...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR CCA 90 bp GAAGCTTCACATTGCGTCATTTACGACATCAGTTCACATTCTACGATAAAAATTCTTCTGCGTGGGAGATaGGATTTCCACATCGTTCTG +
Preference number: 4 (lower is better)
Translates to: EASHCVIYDISSHSTIKILLRGR*DFHIVL
Trigger: CAGAACGATGTGGAAATCCCATCTCCCACGCAGAAG...AATTTTTATCGTAGAATGTGAACTGATGTCGTAAATGACGCAATGTGAAGCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CCA 90 bp TCCTCTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATAGAAGGTCTCTTTCCTaGAATATTGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: SSVFKPFSFDGNWPLLPHRRSLS*NIAYMM
Trigger: CATCATGTATGCAATATTCCAGGAAAGAGACCTTCT...ATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CCA 90 bp TGCTTAATACCTCACTTGAGAGCCCATGCGTGGAGAAAGCAAAGGAATGATACAAGAAGGTCTCTTTCCTaGAATATTGCATACATGATG +
Preference number: 4 (lower is better)
Translates to: CLIPHLRAHAWRKQRNDTRRSLS*NIAYMM
Trigger: CATCATGTATGCAATATTCCAGGAAAGAGACCTTCT...TGTATCATTCCTTTGCTTTCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CCA 90 bp CGTATTTTACAAACTGAAACTGACACCAGGAAGAGGCCTGACAAGTGTTATCAGTCAATGAAACCAACCTaGGATTTTTCCACAGAAGCT +
Preference number: 4 (lower is better)
Translates to: RILQTETDTRKRPDKCYQSMKPT*DFSTEA
Trigger: AGCTTCTGTGGAAAAATCCCAGGTTGGTTTCATTGA...CTGATAACACTTGTCAGGCCTCTTCCTGGTGTCAGTTTCAGTTTGTAAAATACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATAAGCTGGCAAGAACCTaGGCAAAAGGAGTGACAATC +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDKLART*AKGVTI
Trigger: GATTGTCACTCCTTTTGCCCAGGTTCTTGCCAGCTT...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR CCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATTTACACTTCGCAAGCTaGCAAGAACCTGGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDLHFAS*QEPGQK
Trigger: CTTTTGCCCAGGTTCTTGCCAGCTTGCGAAGTGTAA...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR GCA 90 bp ATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGAGACTTGTCTTCTGTTaGAATGTCTATGTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: MGWVVRFIDEVVSEFSHLRLVFC*NVYVSL
Trigger: GAGACTGACATAGACATTGCAACAGAAGACAAGTCT...CAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR GCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATTTCCTCTTTTCTGGCTaGAAGTCCCCTTCTTCATGT +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDFLFSG*KSPSSC
Trigger: ACATGAAGAAGGGGACTTGCAGCCAGAAAAGAGGAA...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR TCA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATCCCTTTGATTTTTCTTaGGCTGGGTTCCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDPFDFS*AGFLFS
Trigger: AGAAAAGAGGAACCCAGCTCAAGAAAAATCAAAGGG...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR GCA 90 bp GAAGCTTCACATTGCGTCATTTACGACATCAGTTCACATTCTACGATAAAAATTATACGATCGGTCCATTaGCGATACAATTCCAAGGAC +
Preference number: 4 (lower is better)
Translates to: EASHCVIYDISSHSTIKIIRSVH*RYNSKD
Trigger: GTCCTTGGAATTGTATCGGCAATGGACCGATCGTAT...AATTTTTATCGTAGAATGTGAACTGATGTCGTAAATGACGCAATGTGAAGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS CCA 90 bp CAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCACATCAAAGCTAGCCACCCGGATGCT +
Preference number: 5 (lower is better)
Translates to: QSRRRAGLRVQWAPT*RRAIFHIKASHPDA
Trigger: AGCATCCGGGTGGCTAGCTTTGATGTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS CCA 90 bp CAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCACATCAAAGCACTCCTGGCTCACAGT +
Preference number: 5 (lower is better)
Translates to: QSRRRAGLRVQWAPT*RRAIFHIKALLAHS
Trigger: ACTGTGAGCCAGGAGTGCTTTGATGTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106911.8
ENSMUST00000173119.8
CDS TCA 90 bp CACTTGCAGGCTGACTCTGGAGACTGGAGCCTGACTAGCCGCTGGTaGCCTCTTGTTCGGCGCTCCATGAAGGTTCGTCAGCAGGGTGAA +
Preference number: 5 (lower is better)
Translates to: HLQADSGDWSLTSRW*PLVRRSMKVRQQGE
Trigger: TTCACCCTGCTGACGAACCTTCATGGAGCGCCGAACAAGAGGTCACCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGCCTGCAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106907.9
ENSMUST00000172616.2
CDS CCA 90 bp CAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTGGGCTCCGACCTaGAGAAGGGCCATTTTCCACATCAAAGCATGTATGAGCCACCGT +
Preference number: 5 (lower is better)
Translates to: QSRRRAGLRVQWAPT*RRAIFHIKACMSHR
Trigger: ACGGTGGCTCATACATGCTTTGATGTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106907.9
ENSMUST00000106908.9
CDS CCA 90 bp GGCATGAAGTACCAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGGGCCATTTTCCACATCAAAGCACTC +
Preference number: 5 (lower is better)
Translates to: GMKYQSRRRAGLRVQ*APTWRRAIFHIKAL
Trigger: GAGTGCTTTGATGTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTGGTACTTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106911.8
ENSMUST00000173119.8
CDS CCA 90 bp GGCATGAAGTACCAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGGGCCATTTTCCACATCAAAGCTAGC +
Preference number: 5 (lower is better)
Translates to: GMKYQSRRRAGLRVQ*APTWRRAIFHIKAS
Trigger: GCTAGCTTTGATGTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTGGTACTTCATGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS CCA 90 bp GGCATGAAGTACCAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTaGGCTCCGACCTGGAGAAGGGCCATTTTCCACATCAAAGCATGT +
Preference number: 5 (lower is better)
Translates to: GMKYQSRRRAGLRVQ*APTWRRAIFHIKAC
Trigger: ACATGCTTTGATGTGGAAAATGGCCCTTCTCCAGGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTGGTACTTCATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106907.9
ENSMUST00000106908.9
CDS GCA 90 bp GGGTCAGTTCAAACTGAAACTTCTCCATCAGGCCTTGGCAGTCCCTaGTCCTCTCATCCAGTGGCGGGGAAGGGCTCTGGGGTATCATAC +
Preference number: 5 (lower is better)
Translates to: GSVQTETSPSGLGSP*SSHPVAGKGSGVSY
Trigger: GTATGATACCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGCAGGGACTGCCAAGGCCTGATGGAGAAGTTTCAGTTTGAACTGACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AGGTGGCCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCCGTGAGATGCTTGTGTaGTTCAGGCTTGAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: RWPLSCAGLGHGRLTLPLREMLV*FRLELC
Trigger: GCACAGCTCAAGCCTGAACAACACAAGCATCTCACG...GAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGGCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp CCTTTGTCCTGTGCAGGCCTTGGCCATGGTAGGTTGACCCTACCACTCAGCGGGATGTTAAGGCCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PLSCAGLGHGRLTLPLSGMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGCCTTAACAT...CCCGCTGAGTGGTAGGGTCAACCTACCATGGCCAAGGCCTGCACAGGACAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGCCCCTCTCCCGTTCTTaGTCTCCCTGCTGGAAAAAC +
Preference number: 5 (lower is better)
Translates to: TTQRACSSRVECSSPHRGPLSRS*SPCWKN
Trigger: GTTTTTCCAGCAGGGAGACAAAGAACGGGAGAGGGG...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ATGAAGTACCAGTCCCGACGAAGAGCCGGCTTGAGGGTCCAGTGGGCTCCGACCTGTTTCCTGGTAGCTTaGGAAGCTCAAGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: MKYQSRRRAGLRVQWAPTCFLVA*EAQVPS
Trigger: GCTTGGAACTTGAGCTTCCAAAGCTACCAGGAAACA...GGTCGGAGCCCACTGGACCCTCAAGCCGGCTCTTCGTCGGGACTGGTACTTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR CAA 90 bp TGGGCAAAGGACTCTGTCCTGGCTGCCCTCGAGGATTATGTGGCCTGGGAGGGGCAATGCTGGGAAGTGTaGTCAAAGGTAGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: WAKDSVLAALEDYVAWEGQCWEV*SKVVWL
Trigger: CAACCACACTACCTTTGACAACACTTCCCAGCATTG...CCCCTCCCAGGCCACATAATCCTCGAGGGCAGCCAGGACAGAGTCCTTTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS GCA 90 bp CAATGCTGGGAAGTGTTGTCAAAGGTAGTGTGGTTGGCCTGGAAATaGCATCTCCCTCGGGGGTCCTTGCCCTTTCACTCTGTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: QCWEVLSKVVWLAWK*HLPRGSLPFHSVSG
Trigger: CCCAGAGACAGAGTGAAAGGGCAAGGACCCCCGAGGGAGATGGCATTTCCAGGCCAACCACACTACCTTTGACAACACTTCCCAGCATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106911.8
ENSMUST00000173119.8
CDS-3UTR CAA 90 bp GCGGGTCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCGTGAGATGCTTGTGTaGTTCAGGCTTGAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: AGLRQACRQGKTAWNCYLREMLV*FRLELC
Trigger: GCACAGCTCAAGCCTGAACAACACAAGCATCTCACG...CAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACCGAAGCGTGAGATGCTaGTGTTGTTCAGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: DPTTQRACSSRVECSSPHRSVRC*CCSGLS
Trigger: GCTCAAGCCTGAACAACACAAGCATCTCACGCTTCG...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS CCA 90 bp CCTTGGCAGTCCCTGCTCCTCTCATCCAGTGGCGGGGAAGGGCTCTaGGGTATCATACTCTGGTACCAGTTCCTGTTATCTTCTAGTGTA +
Preference number: 5 (lower is better)
Translates to: PWQSLLLSSSGGEGL*GIILWYQFLLSSSV
Trigger: TACACTAGAAGATAACAGGAACTGGTACCAGAGTATGATACCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGCAGGGACTGCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGCGTGAGATGCTTGTGTaGTTCAGGCTTGAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRREMLV*FRLELC
Trigger: GCACAGCTCAAGCCTGAACAACACAAGCATCTCACG...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCCGAAGCGTGAGATGCTaGTGTTGTTCAGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: GKARQHGTAICFTAWHSGRSVRC*CCSGLS
Trigger: GCTCAAGCCTGAACAACACAAGCATCTCACGCTTCG...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACTCCTCATTTTCCGTGTaGACTCCGAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: DPTTQRACSSRVECSSPHSSFSV*TPKREM
Trigger: CATCTCACGCTTCGGAGTCAACACGGAAAATGAGGA...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCGGGTCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGTCCTCATTTTCCGTGTaGACTCCGAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: AGLRQACRQGKTAWNCYLSSFSV*TPKREM
Trigger: CATCTCACGCTTCGGAGTCAACACGGAAAATGAGGA...CAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGATGTTAAGGCCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TTQRACSSRVECSSPHRGMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGCCTTAACAT...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGGAGTACCCAGCCACATaGAAGATGTTAAGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: QRACSSRVECSSPHRGREEYPAT*KMLRPH
Trigger: ATGGGGCCTTAACATCTTCAATGTGGCTGGGTACTC...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACGGAGAACACCGGAGCTaGTCACCTTCTTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: DPTTQRACSSRVECSSPHGEHRS*SPSWFL
Trigger: TAGAAACCAAGAAGGTGACAAGCTCCGGTGTTCTCC...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp CAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGAGAGAGGGAGAACACCGGAGCTaGTCACCTTCTTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: QRACSSRVECSSPHRGREGEHRS*SPSWFL
Trigger: TAGAAACCAAGAAGGTGACAAGCTCCGGTGTTCTCC...CTCTCTCCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATGCACAGTGTACCATGTaGCGAAGAACCTGTATCCGG +
Preference number: 5 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHAQCTM*RRTCIR
Trigger: CCGGATACAGGTTCTTCGCAACATGGTACACTGTGC...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCGCACAGTGTACCATGTaGCGAAGAACCTGTATCCGG +
Preference number: 5 (lower is better)
Translates to: GKARQHGTAICFTAWHSGAQCTM*RRTCIR
Trigger: CCGGATACAGGTTCTTCGCAACATGGTACACTGTGC...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACTACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: DPTTQRACSSRVECSSPHYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS TCA 90 bp GGTTGCAGAGGACCATCGCAAGTAGCTTCCATGTATGAGCCACCGTaGAGCGACGCCGCTGTCGGATGCTTTTATTCACCAGCAACTTTC +
Preference number: 5 (lower is better)
Translates to: GCRGPSQVASMYEPP*SDAAVGCFYSPATF
Trigger: GAAAGTTGCTGGTGAATAAAAGCATCCGACAGCGGCGTCGCTTCACGGTGGCTCATACATGGAAGCTACTTGCGATGGTCCTCTGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR CAA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCGTGAGATGCTTGTGTaGTTCAGGCTTGAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: ARQDSMELLFASRPGILAREMLV*FRLELC
Trigger: GCACAGCTCAAGCCTGAACAACACAAGCATCTCACG...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCCGAAGCGTGAGATGCTaGTGTTGTTCAGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFRSVRC*CCSGLS
Trigger: GCTCAAGCCTGAACAACACAAGCATCTCACGCTTCG...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCGAGTACCCAGCCACATaGAAGATGTTAAGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: GKARQHGTAICFTAWHSGEYPAT*KMLRPH
Trigger: ATGGGGCCTTAACATCTTCAATGTGGCTGGGTACTC...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGCCTGAGTGTCTGGCGTaGCTTCTTGGTAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: YHSAGMLVKGGMFISTQRPECLA*LLGKIL
Trigger: CAGAATCTTACCAAGAAGCAACGCCAGACACTCAGG...CCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAGCACAGTGTACCATGTaGCGAAGAACCTGTATCCGG +
Preference number: 5 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQAQCTM*RRTCIR
Trigger: CCGGATACAGGTTCTTCGCAACATGGTACACTGTGC...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACGATACGATCGGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: DPTTQRACSSRVECSSPHDTIGP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACCGATCGTATC...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACGTGTCGATCGGAGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: DPTTQRACSSRVECSSPHVSIGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCTCCGATCGACAC...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACTGTTTCCTGGTAGCTTaGGAAGCTCAAGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: DPTTQRACSSRVECSSPHCFLVA*EAQVPS
Trigger: GCTTGGAACTTGAGCTTCCAAAGCTACCAGGAAACA...GTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CAA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGCTCCCTCGGGGGTCCTaGCCCTTTCACTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAALPRGS*PFHSVS
Trigger: AGAGACAGAGTGAAAGGGCAAGGACCCCCGAGGGAG...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGTTGTGTTGTTCAGGCTaGAGCTGTGCATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: TTQRACSSRVECSSPHRGLCCSG*SCASVS
Trigger: AGAAACTGATGCACAGCTCAAGCCTGAACAACACAA...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGCGTGAGATGCTTGTGTaGTTCAGGCTTGAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: FASRPGILAPNSSNWKGQREMLV*FRLELC
Trigger: GCACAGCTCAAGCCTGAACAACACAAGCATCTCACG...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTCCTCATTTTCCGTGTaGACTCCGAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARSSFSV*TPKREM
Trigger: CATCTCACGCTTCGGAGTCAACACGGAAAATGAGGA...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTTCCTCATTTTCCGTGTaGACTCCGAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: ARQDSMELLFASRPGILASSFSV*TPKREM
Trigger: CATCTCACGCTTCGGAGTCAACACGGAAAATGAGGA...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCATCCTCATTTTCCGTGTaGACTCCGAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: RQDSMELLFASRPGILAPSSFSV*TPKREM
Trigger: CATCTCACGCTTCGGAGTCAACACGGAAAATGAGGA...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGGAGTACCCAGCCACATaGAAGATGTTAAGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: LLHGLAFWLQTQVTGKAREYPAT*KMLRPH
Trigger: ATGGGGCCTTAACATCTTCAATGTGGCTGGGTACTC...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCGAGTACCCAGCCACATaGAAGATGTTAAGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: KARQHGTAICFTAWHSGSEYPAT*KMLRPH
Trigger: ATGGGGCCTTAACATCTTCAATGTGGCTGGGTACTC...GGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAACCTGAGTGTCTGGCGTaGCTTCTTGGTAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQPECLA*LLGKIL
Trigger: CAGAATCTTACCAAGAAGCAACGCCAGACACTCAGG...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCGGAGAACACCGGAGCTaGTCACCTTCTTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: KARQHGTAICFTAWHSGSGEHRS*SPSWFL
Trigger: TAGAAACCAAGAAGGTGACAAGCTCCGGTGTTCTCC...GGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCAGCACAGTGTACCATGTaGCGAAGAACCTGTATCCGG +
Preference number: 5 (lower is better)
Translates to: SPPSLQARQDSMELLFASAQCTM*RRTCIR
Trigger: CCGGATACAGGTTCTTCGCAACATGGTACACTGTGC...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCATACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RQDSMELLFASRPGILAPYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAACCCCTCTCCCGTTCTTaGTCTCCCTGCTGGAAAAAC +
Preference number: 5 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQPLSRS*SPCWKN
Trigger: GTTTTTCCAGCAGGGAGACAAAGAACGGGAGAGGGG...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCGGGTCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGAGCATCCTTTTGAACTaGTTTGAAGCCATCTCGCTG +
Preference number: 5 (lower is better)
Translates to: AGLRQACRQGKTAWNCYLSILLN*FEAISL
Trigger: CAGCGAGATGGCTTCAAACAAGTTCAAAAGGATGCT...CAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGACCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCTCCACACAGAGGGCGGTTCAGCATCCTTTaGAACTTGTTTGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: TTQRACSSRVECSSPHRGRFSIL*NLFEAI
Trigger: GATGGCTTCAAACAAGTTCAAAAGGATGCTGAACCG...CCCTCTGTGTGGAGATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TGCACGTCCGGACACATTCACTGCCTTCTGATTGGCTCCTGGAGAAACGTCAGCTGTTTCCTGGTAGCTTaGGAAGCTCAAGTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: CTSGHIHCLLIGSWRNVSCFLVA*EAQVPS
Trigger: GCTTGGAACTTGAGCTTCCAAAGCTACCAGGAAACA...GCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTGAATGTGTCCGGACGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CAA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCATCAAAGGTAGTGTGGTaGGCCTGGAAATGCCATCTC +
Preference number: 5 (lower is better)
Translates to: RQDSMELLFASRPGILAPSKVVW*AWKCHL
Trigger: GAGATGGCATTTCCAGGCCAACCACACTACCTTTGA...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AAGGGCCATTTTCCACATCAAAGCATATCCAGGAGTGTCTCCTGGGAGGAGGCAGCATGCCACTCTCCATaGCGGAGTAGAGATCATTCC +
Preference number: 5 (lower is better)
Translates to: KGHFPHQSISRSVSWEEAACHSP*RSRDHS
Trigger: GGAATGATCTCTACTCCGCAATGGAGAGTGGCATGC...TGCCTCCTCCCAGGAGACACTCCTGGATATGCTTTGATGTGGAAAATGGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR CAA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAACGAAGCGTGAGATGCTaGTGTTGTTCAGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQRSVRC*CCSGLS
Trigger: GCTCAAGCCTGAACAACACAAGCATCTCACGCTTCG...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAAGAGTACCCAGCCACATaGAAGATGTTAAGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKEYPAT*KMLRPH
Trigger: ATGGGGCCTTAACATCTTCAATGTGGCTGGGTACTC...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGAGAAGGGATGAGGAGAAATCTAGGCATGGGAGATGGAGAGTACAGGTGCTCAGAGTACCCAGCCACATaGAAGATGTTAAGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: GEGMRRNLGMGDGEYRCSEYPAT*KMLRPH
Trigger: ATGGGGCCTTAACATCTTCAATGTGGCTGGGTACTC...TGAGCACCTGTACTCTCCATCTCCCATGCCTAGATTTCTCCTCATCCCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp GGAGAAGGGATGAGGAGAAATCTAGGCATGGGAGATGGAGAGTACAGGTGCTCACCTGAGTGTCTGGCGTaGCTTCTTGGTAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: GEGMRRNLGMGDGEYRCSPECLA*LLGKIL
Trigger: CAGAATCTTACCAAGAAGCAACGCCAGACACTCAGG...TGAGCACCTGTACTCTCCATCTCCCATGCCTAGATTTCTCCTCATCCCTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp AAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCGATACGATCGGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: KARQHGTAICFTAWHSGSDTIGP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACCGATCGTATC...GGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTGATACGATCGGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: ARQDSMELLFASRPGILADTIGP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACCGATCGTATC...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTGTTAGTGAGTTCAGTCATCTGTCAGGACAGCTTCCCAACACCTAGTGCAGAGCCCCTCTCCCGTTCTTaGTCTCCCTGCTGGAAAAAC +
Preference number: 5 (lower is better)
Translates to: LLVSSVICQDSFPTPSAEPLSRS*SPCWKN
Trigger: GTTTTTCCAGCAGGGAGACAAAGAACGGGAGAGGGG...CTCTGCACTAGGTGTTGGGAAGCTGTCCTGACAGATGACTGAACTCACTAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGCCCCTCTCCCGTTCTTaGTCTCCCTGCTGGAAAAAC +
Preference number: 5 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAAPLSRS*SPCWKN
Trigger: GTTTTTCCAGCAGGGAGACAAAGAACGGGAGAGGGG...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAGTGTCGATCGGAGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQVSIGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCTCCGATCGACAC...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGGTGTCGATCGGAGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARVSIGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCTCCGATCGACAC...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCCCTCCAGCGTCTCCATaGCTAGTTTCTGATATGATT +
Preference number: 5 (lower is better)
Translates to: GKARQHGTAICFTAWHSGPPASP*LVSDMI
Trigger: AATCATATCAGAAACTAGCAATGGAGACGCTGGAGG...GCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATCGGTTCAGCATCCTTTaGAACTTGTTTGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHRFSIL*NLFEAI
Trigger: GATGGCTTCAAACAAGTTCAAAAGGATGCTGAACCG...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AACCACAGGGTTGAGGGTGAGTCTTCAGGGAATGGACCGAACTCAGGCATGGATAGCATGGTGAATTCCTaGGTGAACTGCGTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: NHRVEGESSGNGPNSGMDSMVNS*VNCVEK
Trigger: TTTCTCCACGCAGTTCACCAAGGAATTCACCATGCT...ATCCATGCCTGAGTTCGGTCCATTCCCTGAAGACTCACCCTCAACCCTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CAA 90 bp CGTCAGCAGGGTGAAGTTGTTTCTTACACTTCGCAAGCTGGCAAGAACCTGGGCAGCATGGTGAATTCCTaGGTGAACTGCGTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: RQQGEVVSYTSQAGKNLGSMVNS*VNCVEK
Trigger: TTTCTCCACGCAGTTCACCAAGGAATTCACCATGCT...GCCCAGGTTCTTGCCAGCTTGCGAAGTGTAAGAAACAACTTCACCCTGCTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR CAA 90 bp AAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCGTCAGCAGGGTGAAGTaGTTTCTTACACTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: KARQHGTAICFTAWHSGSVSRVK*FLTLRK
Trigger: CTTGCGAAGTGTAAGAAACAACTTCACCCTGCTGAC...GGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AATGACTCATCATCTGTAAGAAAGGCCACTGAAATTGCTAGGGCCTTGAGGAGTCTCCCTCGGGGGTCCTaGCCCTTTCACTCTGTCTCT +
Preference number: 5 (lower is better)
Translates to: NDSSSVRKATEIARALRSLPRGS*PFHSVS
Trigger: AGAGACAGAGTGAAAGGGCAAGGACCCCCGAGGGAG...ACTCCTCAAGGCCCTAGCAATTTCAGTGGCCTTTCTTACAGATGATGAGTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS TCA 90 bp TCAGGTCTTCCAGCTCCTTGGCTAGATGATCCTCATTTTCCGTGTTaGCTCCGAAGCGTGAGATGCTTGTGTTGTTCAGGCTTGAGCTGT +
Preference number: 5 (lower is better)
Translates to: SGLPAPWLDDPHFPC*LRSVRCLCCSGLSC
Trigger: ACAGCTCAAGCCTGAACAACACAAGCATCTCACGCTTCGGAGTCAACACGGAAAATGAGGATCATCTAGCCAAGGAGCTGGAAGACCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106901.2
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS GCA 90 bp TTGACTCCGAAGCGTGAGATGCTTGTGTTGTTCAGGCTTGAGCTGTaGATCAGTTTCTTCACTCCACTTATCTGGGTCATGAGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LTPKREMLVLFRLEL*ISFFTPLIWVMSCC
Trigger: GCAGCAGCTCATGACCCAGATAAGTGGAGTGAAGAAACTGATGCACAGCTCAAGCCTGAACAACACAAGCATCTCACGCTTCGGAGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106901.2
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATTCCACATCGTTCTGCTaGTCTAAGAACGTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHSTSFC*SKNVFE
Trigger: TTCAAACACGTTCTTAGACAAGCAGAACGATGTGGA...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCATTGTGTTGTTCAGGCTaGAGCTGTGCATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: RQDSMELLFASRPGILAPLCCSG*SCASVS
Trigger: AGAAACTGATGCACAGCTCAAGCCTGAACAACACAA...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCTTGTGTTGTTCAGGCTaGAGCTGTGCATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: KARQHGTAICFTAWHSGSLCCSG*SCASVS
Trigger: AGAAACTGATGCACAGCTCAAGCCTGAACAACACAA...GGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTATGTTAAGGCCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SMELLFASRPGILAPNSSMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGCCTTAACAT...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAATGTTAAGGCCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGCCTTAACAT...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCAGATACGATCGGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: SPPSLQARQDSMELLFASDTIGP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACCGATCGTATC...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTGTATCCAGAATATCTaGAGCATCCGGTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARCIQNI*SIRLNQ
Trigger: CTGGTTCAACCGGATGCTCAAGATATTCTGGATACA...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGTGTATCCAGAATATCTaGAGCATCCGGTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: SAKLAGKARQHGTAICFTCIQNI*SIRLNQ
Trigger: CTGGTTCAACCGGATGCTCAAGATATTCTGGATACA...CGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCAGTGTCGATCGGAGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: SPPSLQARQDSMELLFASVSIGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCTCCGATCGACAC...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAAGTGTCGATCGGAGACTaGTCTTCTGTTGCAATGTCT +
Preference number: 5 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKVSIGD*SSVAMS
Trigger: AGACATTGCAACAGAAGACAAGTCTCCGATCGACAC...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCTCCAGCGTCTCCATaGCTAGTTTCTGATATGATT +
Preference number: 5 (lower is better)
Translates to: ARQDSMELLFASRPGILAPPASP*LVSDMI
Trigger: AATCATATCAGAAACTAGCAATGGAGACGCTGGAGG...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAACCTCCAGCGTCTCCATaGCTAGTTTCTGATATGATT +
Preference number: 5 (lower is better)
Translates to: GKTAWNCYLLHGLAFWLQPPASP*LVSDMI
Trigger: AATCATATCAGAAACTAGCAATGGAGACGCTGGAGG...TTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAGCATCCTTTTGAACTaGTTTGAAGCCATCTCGCTG +
Preference number: 5 (lower is better)
Translates to: RQDSMELLFASRPGILAPSILLN*FEAISL
Trigger: CAGCGAGATGGCTTCAAACAAGTTCAAAAGGATGCT...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTCAGCAGGGTGAAGTaGTTTCTTACACTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: FASRPGILAPNSSNWKGQVSRVK*FLTLRK
Trigger: CTTGCGAAGTGTAAGAAACAACTTCACCCTGCTGAC...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCAGTCAGCAGGGTGAAGTaGTTTCTTACACTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: SPPSLQARQDSMELLFASVSRVK*FLTLRK
Trigger: CTTGCGAAGTGTAAGAAACAACTTCACCCTGCTGAC...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGACAAGAAATGGTGAATGGGACAGGAAAGGACGGCCTGAGTATAAGGACCTCATCAAAGGTAGTGTGGTaGGCCTGGAAATGCCATCTC +
Preference number: 5 (lower is better)
Translates to: GQEMVNGTGKDGLSIRTSSKVVW*AWKCHL
Trigger: GAGATGGCATTTCCAGGCCAACCACACTACCTTTGA...TGAGGTCCTTATACTCAGGCCGTCCTTTCCTGTCCCATTCACCATTTCTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000173119.8
CDS-3UTR CAA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACAATGCTGGGAAGTGTaGTCAAAGGTAGTGTGGTTG +
Preference number: 5 (lower is better)
Translates to: SPPSLQARQDSMELLFASQCWEV*SKVVWL
Trigger: CAACCACACTACCTTTGACAACACTTCCCAGCATTG...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106911.8
CDS TCA 90 bp AATCCCTGTTCTCTGGATCAATCACACAAAGCGTCTTTGTGCTGCTaGAATAGCTGTGGCCTTCTCCCTCCTTTTCCGGTCCCTCAGAAT +
Preference number: 5 (lower is better)
Translates to: NPCSLDQSHKASLCC*NSCGLLPPFPVPQN
Trigger: ATTCTGAGGGACCGGAAAAGGAGGGAGAAGGCCACAGCTATTTCAGCAGCACAAAGACGCTTTGTGTGATTGATCCAGAGAACAGGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GGTAGGTTGACCCTACCACTCAGCGGGCATGCTCGTCAAGGGTGGAATGTTCATTGTCTAAGAACGTGTTaGAAATGTACTCAGACACCT +
Preference number: 5 (lower is better)
Translates to: GRLTLPLSGHARQGWNVHCLRTC*KCTQTP
Trigger: AGGTGTCTGAGTACATTTCAAACACGTTCTTAGACA...ATGAACATTCCACCCTTGACGAGCATGCCCGCTGAGTGGTAGGGTCAACCTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGGTCCACATCGTTCTGCTaGTCTAAGAACGTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: LLHGLAFWLQTQVTGKARSTSFC*SKNVFE
Trigger: TTCAAACACGTTCTTAGACAAGCAGAACGATGTGGA...CCTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCATCCACATCGTTCTGCTaGTCTAAGAACGTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: RQDSMELLFASRPGILAPSTSFC*SKNVFE
Trigger: TTCAAACACGTTCTTAGACAAGCAGAACGATGTGGA...TGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGTTGTGTTGTTCAGGCTaGAGCTGTGCATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: FASRPGILAPNSSNWKGQLCCSG*SCASVS
Trigger: AGAAACTGATGCACAGCTCAAGCCTGAACAACACAA...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GTTTGCTTGCCTTGCCTTACACTGGGAAGATACTTTGGCCACATTGTAAAGGTGCGTGAGATGCTTGTGTaGTTCAGGCTTGAGCTGTGC +
Preference number: 5 (lower is better)
Translates to: VCLPCLTLGRYFGHIVKVREMLV*FRLELC
Trigger: GCACAGCTCAAGCCTGAACAACACAAGCATCTCACG...CACCTTTACAATGTGGCCAAAGTATCTTCCCAGTGTAAGGCAAGGCAAGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp AGAAAGGACAACTGGGTCACTAAGAAGTTGACAAACTGGACCAAGAGGACAGCTCGAAGCGTGAGATGCTaGTGTTGTTCAGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: RKDNWVTKKLTNWTKRTARSVRC*CCSGLS
Trigger: GCTCAAGCCTGAACAACACAAGCATCTCACGCTTCG...AGCTGTCCTCTTGGTCCAGTTTGTCAACTTCTTAGTGACCCAGTTGTCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp TTGTTAGTGAGTTCAGTCATCTGTCAGGACAGCTTCCCAACACCTAGTGCAGAGCCTGAGTGTCTGGCGTaGCTTCTTGGTAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: LLVSSVICQDSFPTPSAEPECLA*LLGKIL
Trigger: CAGAATCTTACCAAGAAGCAACGCCAGACACTCAGG...CTCTGCACTAGGTGTTGGGAAGCTGTCCTGACAGATGACTGAACTCACTAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGCCTGAGTGTCTGGCGTaGCTTCTTGGTAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAAPECLA*LLGKIL
Trigger: CAGAATCTTACCAAGAAGCAACGCCAGACACTCAGG...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCCCCTCTCCCGTTCTTaGTCTCCCTGCTGGAAAAAC +
Preference number: 5 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQPLSRS*SPCWKN
Trigger: GTTTTTCCAGCAGGGAGACAAAGAACGGGAGAGGGG...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GACAACTGGGTCACTAAGAAGTTGACAAACTGGACCAAGAGGACAGCTGTTTATCCCCTCTCCCGTTCTTaGTCTCCCTGCTGGAAAAAC +
Preference number: 5 (lower is better)
Translates to: DNWVTKKLTNWTKRTAVYPLSRS*SPCWKN
Trigger: GTTTTTCCAGCAGGGAGACAAAGAACGGGAGAGGGG...ATAAACAGCTGTCCTCTTGGTCCAGTTTGTCAACTTCTTAGTGACCCAGTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp TTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTAACTGGAAAGGCCAGTGTATCCAGAATATCTaGAGCATCCGGTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: FASRPGILAPNSSNWKGQCIQNI*SIRLNQ
Trigger: CTGGTTCAACCGGATGCTCAAGATATTCTGGATACA...CTGGCCTTTCCAGTTACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACCTCCAGCGTCTCCATaGCTAGTTTCTGATATGATT +
Preference number: 5 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKPPASP*LVSDMI
Trigger: AATCATATCAGAAACTAGCAATGGAGACGCTGGAGG...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAAAGCATCCTTTTGAACTaGTTTGAAGCCATCTCGCTG +
Preference number: 5 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKSILLN*FEAISL
Trigger: CAGCGAGATGGCTTCAAACAAGTTCAAAAGGATGCT...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACGGTTCAGCATCCTTTaGAACTTGTTTGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKRFSIL*NLFEAI
Trigger: GATGGCTTCAAACAAGTTCAAAAGGATGCTGAACCG...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AAGGGCCATTTTCCACATCAAAGCATATCCAGGAGTGTCTCCTGGGAGGAGGCACTGCGTGGAGAAATTTaGGGAGATGTAGGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: KGHFPHQSISRSVSWEEALRGEI*GDVGLF
Trigger: AAACAGACCTACATCTCCCAAAATTTCTCCACGCAG...TGCCTCCTCCCAGGAGACACTCCTGGATATGCTTTGATGTGGAAAATGGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS-3UTR CAA 90 bp GCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTTGTCTAAGAACGTGTTaGAAATGTACTCAGACACCT +
Preference number: 5 (lower is better)
Translates to: ARQDSMELLFASRPGILACLRTC*KCTQTP
Trigger: AGGTGTCTGAGTACATTTCAAACACGTTCTTAGACA...AGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGTCTAAGAACGTGTTaGAAATGTACTCAGACACCT +
Preference number: 5 (lower is better)
Translates to: CRQGKTAWNCYLLHGLAFCLRTC*KCTQTP
Trigger: AGGTGTCTGAGTACATTTCAAACACGTTCTTAGACA...GAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TCTCCGCCAAGCTTGCAGGCAAGGCAAGACAGCATGGAACTGCTATTTGCTTCATCCACATCGTTCTGCTaGTCTAAGAACGTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: SPPSLQARQDSMELLFASSTSFC*SKNVFE
Trigger: TTCAAACACGTTCTTAGACAAGCAGAACGATGTGGA...TGAAGCAAATAGCAGTTCCATGCTGTCTTGCCTTGCCTGCAAGCTTGGCGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCAAGACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAATCCACATCGTTCTGCTaGTCTAAGAACGTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: ARQHGTAICFTAWHSGSKSTSFC*SKNVFE
Trigger: TTCAAACACGTTCTTAGACAAGCAGAACGATGTGGA...TTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGTCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ACAGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAATTGTGTTGTTCAGGCTaGAGCTGTGCATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: TAWNCYLLHGLAFWLQTQLCCSG*SCASVS
Trigger: AGAAACTGATGCACAGCTCAAGCCTGAACAACACAA...TTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCGAAGCGTGAGATGCTaGTGTTGTTCAGGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQRSVRC*CCSGLS
Trigger: GCTCAAGCCTGAACAACACAAGCATCTCACGCTTCG...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AGGATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGTACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RMFSRAHELNSSVDEDIRYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...CCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTTGTATCCAGAATATCTaGAGCATCCGGTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: SMELLFASRPGILAPNSSCIQNI*SIRLNQ
Trigger: CTGGTTCAACCGGATGCTCAAGATATTCTGGATACA...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTCTGCGTGGAGAAATTTaGGGAGATGTAGGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: SMELLFASRPGILAPNSSLRGEI*GDVGLF
Trigger: AAACAGACCTACATCTCCCAAAATTTCTCCACGCAG...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS CCA 90 bp AACAGCACCTTCTGCCTCTCCAGAGGTCAATCCCGAGGGTGTAACTaGAAGAGCTGTAGGATTTACTCAAGCTACATTCAAAATAGTCCT +
Preference number: 5 (lower is better)
Translates to: NSTFCLSRGQSRGCN*KSCRIYSSYIQNSP
Trigger: AGGACTATTTTGAATGTAGCTTGAGTAAATCCTACAGCTCTTCCAGTTACACCCTCGGGATTGACCTCTGGAGAGGCAGAAGGTGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000106911.8
ENSMUST00000173119.8
CDS-3UTR CAA 90 bp TGCTTAATACCTCACTTGAGAGCCCATGCGTGGAGAAAGCAAAGGAATGATACATCCTCATTTTCCGTGTaGACTCCGAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: CLIPHLRAHAWRKQRNDTSSFSV*TPKREM
Trigger: CATCTCACGCTTCGGAGTCAACACGGAAAATGAGGA...TGTATCATTCCTTTGCTTTCTCCACGCATGGGCTCTCAAGTGAGGTATTAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGATGTTAAGGCCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGCCTTAACAT...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TCCTCTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATATGTTAAGGCCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SSVFKPFSFDGNWPLLPHMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGCCTTAACAT...ATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TCCTCTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATGAGTACCCAGCCACATaGAAGATGTTAAGGCCCCAT +
Preference number: 5 (lower is better)
Translates to: SSVFKPFSFDGNWPLLPHEYPAT*KMLRPH
Trigger: ATGGGGCCTTAACATCTTCAATGTGGCTGGGTACTC...ATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ATTGTCTTCTTGTTGCCTTTGATGAATTTGAACATGGCTCCACTGCTCGTGAGCCCTGAGTGTCTGGCGTaGCTTCTTGGTAAGATTCTG +
Preference number: 5 (lower is better)
Translates to: IVFLLPLMNLNMAPLLVSPECLA*LLGKIL
Trigger: CAGAATCTTACCAAGAAGCAACGCCAGACACTCAGG...GCTCACGAGCAGTGGAGCCATGTTCAAATTCATCAAAGGCAACAAGAAGACAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CAA 90 bp AAAACGAAAGCCACAATTAGAGCAGAGCCCAGTGACAAACTCAACTCATGCATCTACAATTCCAAGGACTaGGTGGGGTTGCTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: KTKATIRAEPSDKLNSCIYNSKD*VGLLRS
Trigger: AGACCTGAGCAACCCCACCAAGTCCTTGGAATTGTA...GATGCATGAGTTGAGTTTGTCACTGGGCTCTGCTCTAATTGTGGCTTTCGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CAA 90 bp TGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGTCAGGACCCCTCTCCCGTTCTTaGTCTCCCTGCTGGAAAAAC +
Preference number: 5 (lower is better)
Translates to: WVVRFIDEVVSEFSHLSGPLSRS*SPCWKN
Trigger: GTTTTTCCAGCAGGGAGACAAAGAACGGGAGAGGGG...TCCTGACAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGAGCATCCTTTTGAACTaGTTTGAAGCCATCTCGCTG +
Preference number: 5 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAASILLN*FEAISL
Trigger: CAGCGAGATGGCTTCAAACAAGTTCAAAAGGATGCT...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGCTGCGCGGTTCAGCATCCTTTaGAACTTGTTTGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: FKPFSFDGNWPLLPHTAARFSIL*NLFEAI
Trigger: GATGGCTTCAAACAAGTTCAAAAGGATGCTGAACCG...CGCAGCTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp CACTGCCTTCTGATTGGCTCCTGGAGAAACGTCAGCAACAAGTATTTACAGATGGTCAGCAGGGTGAAGTaGTTTCTTACACTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: HCLLIGSWRNVSNKYLQMVSRVK*FLTLRK
Trigger: CTTGCGAAGTGTAAGAAACAACTTCACCCTGCTGAC...CATCTGTAAATACTTGTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CAA 90 bp AGCATGGAACTGCTATTTGCTTCACGGCCTGGCATTCTGGCTCCAAACTCAAGTTGTCTAAGAACGTGTTaGAAATGTACTCAGACACCT +
Preference number: 5 (lower is better)
Translates to: SMELLFASRPGILAPNSSCLRTC*KCTQTP
Trigger: AGGTGTCTGAGTACATTTCAAACACGTTCTTAGACA...ACTTGAGTTTGGAGCCAGAATGCCAGGCCGTGAAGCAAATAGCAGTTCCATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GCTTCCCAACACCTAGTGCAGAGCAATCTCTCAGCTTTGTGTCCTCTGTTTTCATCCACATCGTTCTGCTaGTCTAAGAACGTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: ASQHLVQSNLSALCPLFSSTSFC*SKNVFE
Trigger: TTCAAACACGTTCTTAGACAAGCAGAACGATGTGGA...TGAAAACAGAGGACACAAAGCTGAGAGATTGCTCTGCACTAGGTGTTGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TGGCAGACAATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCTCCTCATTTTCCGTGTaGACTCCGAAGCGTGAGATG +
Preference number: 5 (lower is better)
Translates to: WQTMGWVVRFIDEVVSEFSSFSV*TPKREM
Trigger: CATCTCACGCTTCGGAGTCAACACGGAAAATGAGGA...GAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCATTGTCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp CTGCTGATGGGGCTCCATGTTTCTCTTAAGCAATGTCTGGGATATATAATACACGGAGAACACCGGAGCTaGTCACCTTCTTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: LLMGLHVSLKQCLGYIIHGEHRS*SPSWFL
Trigger: TAGAAACCAAGAAGGTGACAAGCTCCGGTGTTCTCC...GTGTATTATATATCCCAGACATTGCTTAAGAGAAACATGGAGCCCCATCAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS-3UTR CAA 90 bp ACTGGGAAGATACTTTGGCCACATTGTAAAGGTGGGTCTTTTTCTCATCTGAAAGCACAGTGTACCATGTaGCGAAGAACCTGTATCCGG +
Preference number: 5 (lower is better)
Translates to: TGKILWPHCKGGSFSHLKAQCTM*RRTCIR
Trigger: CCGGATACAGGTTCTTCGCAACATGGTACACTGTGC...TTTCAGATGAGAAAAAGACCCACCTTTACAATGTGGCCAAAGTATCTTCCCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp CTGTTTTCAAGCCATTTAGCTTTGATGGGAACTGGCCTCTACTACCACATACAGGATACGATCGGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: LFSSHLALMGTGLYYHIQDTIGP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACCGATCGTATC...CTGTATGTGGTAGTAGAGGCCAGTTCCCATCAAAGCTAAATGGCTTGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGACAGATACGATCGGTCCATaGCCGATACAATTCCAAGGA +
Preference number: 5 (lower is better)
Translates to: MFSRAHELNSSVDEDIRTDTIGP*PIQFQG
Trigger: TCCTTGGAATTGTATCGGCAATGGACCGATCGTATC...TGTCCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp ATTGTCTTCTTGTTGCCTTTGATGAATTTGAACATGGCTCCACTGCTCGTGAGCAGCATGGTGAATTCCTaGGTGAACTGCGTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: IVFLLPLMNLNMAPLLVSSMVNS*VNCVEK
Trigger: TTTCTCCACGCAGTTCACCAAGGAATTCACCATGCT...GCTCACGAGCAGTGGAGCCATGTTCAAATTCATCAAAGGCAACAAGAAGACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106908.9
CDS CCA 90 bp TGTTGCAATGTCTATGTCAGTCTCTTCCAGAGAATCCCTGTTCTCTaGATCAATCACACAAAGCGTCTTTGTGCTGCTGAAATAGCTGTG +
Preference number: 5 (lower is better)
Translates to: CCNVYVSLFQRIPVL*INHTKRLCAAEIAV
Trigger: CACAGCTATTTCAGCAGCACAAAGACGCTTTGTGTGATTGATCCAGAGAACAGGGATTCTCTGGAAGAGACTGACATAGACATTGCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp ATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGACATTGTGTTGTTCAGGCTaGAGCTGTGCATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: MFSRAHELNSSVDEDIRTLCCSG*SCASVS
Trigger: AGAAACTGATGCACAGCTCAAGCCTGAACAACACAA...TGTCCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp ATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGGGAGAACACCGGAGCTaGTCACCTTCTTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: MGWVVRFIDEVVSEFSHLGEHRS*SPSWFL
Trigger: TAGAAACCAAGAAGGTGACAAGCTCCGGTGTTCTCC...CAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TGGGTCACTAAGAAGTTGACAAACTGGACCAAGAGGACAGCTGTTTATGTATTTGGAGAACACCGGAGCTaGTCACCTTCTTGGTTTCTA +
Preference number: 5 (lower is better)
Translates to: WVTKKLTNWTKRTAVYVFGEHRS*SPSWFL
Trigger: TAGAAACCAAGAAGGTGACAAGCTCCGGTGTTCTCC...AAATACATAAACAGCTGTCCTCTTGGTCCAGTTTGTCAACTTCTTAGTGACCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp CTGCCTTCTGATTGGCTCCTGGAGAAACGTCAGCAACAAGTATTTACAGATGATCTGCGTGGAGAAATTTaGGGAGATGTAGGTCTGTTT +
Preference number: 5 (lower is better)
Translates to: LPSDWLLEKRQQQVFTDDLRGEI*GDVGLF
Trigger: AAACAGACCTACATCTCCCAAAATTTCTCCACGCAG...ATCATCTGTAAATACTTGTTGCTGACGTTTCTCCAGGAGCCAATCAGAAGGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS-3UTR CAA 90 bp ATGTTCAGCAGAGCCCATGAATTAAACAGCAGTGTGGATGAAGACATCAGGACATCCACATCGTTCTGCTaGTCTAAGAACGTGTTTGAA +
Preference number: 5 (lower is better)
Translates to: MFSRAHELNSSVDEDIRTSTSFC*SKNVFE
Trigger: TTCAAACACGTTCTTAGACAAGCAGAACGATGTGGA...TGTCCTGATGTCTTCATCCACACTGCTGTTTAATTCATGGGCTCTGCTGAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp TGGCAGACAATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCTTGTGTTGTTCAGGCTaGAGCTGTGCATCAGTTTCT +
Preference number: 5 (lower is better)
Translates to: WQTMGWVVRFIDEVVSEFLCCSG*SCASVS
Trigger: AGAAACTGATGCACAGCTCAAGCCTGAACAACACAA...GAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCATTGTCTGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp GTGTCCACCAAATCTGATGAGGTCTTAGATAACTGGAAACTTTGCTTAATACCTATGTTAAGGCCCCATTaGTTCAGGTCTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: VSTKSDEVLDNWKLCLIPMLRPH*FRSSSS
Trigger: GGAGCTGGAAGACCTGAACAAATGGGGCCTTAACAT...AGGTATTAAGCAAAGTTTCCAGTTATCTAAGACCTCATCAGATTTGGTGGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS-3UTR CAA 90 bp ATGGGTTGGGTGGTGAGATTTATAGATGAAGTTGTTAGTGAGTTCAGTCATCTGTGTATCCAGAATATCTaGAGCATCCGGTTGAACCAG +
Preference number: 5 (lower is better)
Translates to: MGWVVRFIDEVVSEFSHLCIQNI*SIRLNQ
Trigger: CTGGTTCAACCGGATGCTCAAGATATTCTGGATACA...CAGATGACTGAACTCACTAACAACTTCATCTATAAATCTCACCACCCAACCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATCCGGATGCTTCCCCTTaGATTTTTCTTGAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDPDASP*IFLELG
Trigger: ACCCAGCTCAAGAAAAATCAAAGGGGAAGCATCCGG...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS-3UTR CAA 90 bp TTTATTTTCTGGATTTTCATTCATGTGAAACAAAGGACTGGGCATCACCGTGATGTCAGCAGGGTGAAGTaGTTTCTTACACTTCGCAAG +
Preference number: 5 (lower is better)
Translates to: FIFWIFIHVKQRTGHHRDVSRVK*FLTLRK
Trigger: CTTGCGAAGTGTAAGAAACAACTTCACCCTGCTGAC...ATCACGGTGATGCCCAGTCCTTTGTTTCACATGAATGAAAATCCAGAAAATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000172616.2
CDS TCA 90 bp ATGTCGCAGTGTTCCTCTTGTAGCAATTTGAATCCCACAGCAAGGTaGTGGTTTTCCAGAACAGATTCATCATTATACATCAAAGCAAGT +
Preference number: 5 (lower is better)
Translates to: MSQCSSCSNLNPTAR*WFSRTDSSLYIKAS
Trigger: ACTTGCTTTGATGTATAATGATGAATCTGTTCTGGAAAACCATCACCTTGCTGTGGGATTCAAATTGCTACAAGAGGAACACTGCGACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106901.2
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS-3UTR CAA 90 bp TGGGTCACTAAGAAGTTGACAAACTGGACCAAGAGGACAGCTGTTTATGTATTTTGTCTAAGAACGTGTTaGAAATGTACTCAGACACCT +
Preference number: 5 (lower is better)
Translates to: WVTKKLTNWTKRTAVYVFCLRTC*KCTQTP
Trigger: AGGTGTCTGAGTACATTTCAAACACGTTCTTAGACA...AAATACATAAACAGCTGTCCTCTTGGTCCAGTTTGTCAACTTCTTAGTGACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000106901.2
CDS TCA 72 bp TCGCACACTTGCAGGCTGACTCTGGAGACTGGAGCCTaGCTAGCCGCTGGTGACCTCTTGTTCGGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: SHTCRLTLETGA*LAAGDLLFGAP
Trigger: TGGAGCGCCGAACAAGAGGTCACCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGCCTGCAAGTGTGCGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS GCA 72 bp CAAACTGAAACTTCTCCATCAGGCCTTGGCAGTCCCTaGTCCTCTCATCCAGTGGCGGGGAAGGGCTCTGGG +
Preference number: 6 (lower is better)
Translates to: QTETSPSGLGSP*SSHPVAGKGSG
Trigger: CCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGCAGGGACTGCCAAGGCCTGATGGAGAAGTTTCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS CCA 72 bp CATCAGGCCTTGGCAGTCCCTGCTCCTCTCATCCAGTaGCGGGGAAGGGCTCTGGGGTATCATACTCTGGTA +
Preference number: 6 (lower is better)
Translates to: HQALAVPAPLIQ*RGRALGYHTLV
Trigger: TACCAGAGTATGATACCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGCAGGGACTGCCAAGGCCTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS TCA 72 bp GATTCTTCTTGCAGGCTGACTCTGGAGACTGGAGCCTaGCTAGCCGCTGGTGACCTCTTGTTCGGCGCTCCA +
Preference number: 6 (lower is better)
Translates to: DSSCRLTLETGA*LAAGDLLFGAP
Trigger: TGGAGCGCCGAACAAGAGGTCACCAGCGGCTAGTCAGGCTCCAGTCTCCAGAGTCAGCCTGCAAGAAGAATC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS CAA 72 bp TGGTTGGCCTGGAAATGCCATCTCCCTCGGGGGTCCTaGCCCTTTCACTCTGTCTCTGGGACAATGGTGGCA +
Preference number: 6 (lower is better)
Translates to: WLAWKCHLPRGS*PFHSVSGTMVA
Trigger: TGCCACCATTGTCCCAGAGACAGAGTGAAAGGGCAAGGACCCCCGAGGGAGATGGCATTTCCAGGCCAACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106911.8
ENSMUST00000173119.8
CDS CAA 90 bp CTCTTCCTCAAGGGTCAGTTCAAACTGAAACTTCTCCATCAGGCCTaGGCAGTCCCTGCTCCTCTCATCCAGTGGCGGGGAAGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: LFLKGQFKLKLLHQA*AVPAPLIQWRGRAL
Trigger: CAGAGCCCTTCCCCGCCACTGGATGAGAGGAGCAGGGACTGCCAAGGCCTGATGGAGAAGTTTCAGTTTGAACTGACCCTTGAGGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS CCA 72 bp TGGAAACAAACACACAGACAGGTAGTTAGGCTGCAGTaGCTGCAGGCTGGCCATAGCCGAGTCTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: WKQTHRQVVRLQ*LQAGHSRVSST
Trigger: GGTGGAGGAGACTCGGCTATGGCCAGCCTGCAGCCACTGCAGCCTAACTACCTGTCTGTGTGTTTGTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000097950.9
CDS CAA 72 bp CTCTCTGCATTTCGTCAGTCTCCTGTGGTCGCACACTaGCAGGCTGACTCTGGAGACTGGAGCCTGACTAGC +
Preference number: 6 (lower is better)
Translates to: LSAFRQSPVVAH*QADSGDWSLTS
Trigger: GCTAGTCAGGCTCCAGTCTCCAGAGTCAGCCTGCAAGTGTGCGACCACAGGAGACTGACGAAATGCAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000106907.9
CDS CAA 90 bp AAGGTAGTGTGGTTGGCCTGGAAATGCCATCTCCCTCGGGGGTCCTaGCCCTTTCACTCTGTCTCTGGGACAATGGTGGCAGCTGTAAGT +
Preference number: 6 (lower is better)
Translates to: KVVWLAWKCHLPRGS*PFHSVSGTMVAAVS
Trigger: ACTTACAGCTGCCACCATTGTCCCAGAGACAGAGTGAAAGGGCAAGGACCCCCGAGGGAGATGGCATTTCCAGGCCAACCACACTACCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106911.8
ENSMUST00000173119.8
CDS CCA 72 bp TCCCTGCTCCTCTCATCCAGTGGCGGGGAAGGGCTCTaGGGTATCATACTCTGGTACCAGTTCCTGTTATCT +
Preference number: 6 (lower is better)
Translates to: SLLLSSSGGEGL*GIILWYQFLLS
Trigger: AGATAACAGGAACTGGTACCAGAGTATGATACCCCAGAGCCCTTCCCCGCCACTGGATGAGAGGAGCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS CCA 72 bp TGCTGGGAAGTGTTGTCAAAGGTAGTGTGGTTGGCCTaGAAATGCCATCTCCCTCGGGGGTCCTTGCCCTTT +
Preference number: 6 (lower is better)
Translates to: CWEVLSKVVWLA*KCHLPRGSLPF
Trigger: AAAGGGCAAGGACCCCCGAGGGAGATGGCATTTCCAGGCCAACCACACTACCTTTGACAACACTTCCCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106911.8
ENSMUST00000173119.8
CDS GCA 72 bp GAAGTGTTGTCAAAGGTAGTGTGGTTGGCCTGGAAATaGCATCTCCCTCGGGGGTCCTTGCCCTTTCACTCT +
Preference number: 6 (lower is better)
Translates to: EVLSKVVWLAWK*HLPRGSLPFHS
Trigger: AGAGTGAAAGGGCAAGGACCCCCGAGGGAGATGGCATTTCCAGGCCAACCACACTACCTTTGACAACACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000106911.8
ENSMUST00000173119.8
CDS TCA 72 bp CCCTCAGAATCCTCTTCCTCAAGGGTCAGTTCAAACTaGAACTTCTCCATCAGGCCTTGGCAGTCCCTGCTC +
Preference number: 6 (lower is better)
Translates to: PSESSSSRVSSN*NFSIRPWQSLL
Trigger: GAGCAGGGACTGCCAAGGCCTGATGGAGAAGTTTCAGTTTGAACTGACCCTTGAGGAAGAGGATTCTGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS TCA 72 bp GGCCATTTTCCACATCAAAGCATGTATGAGCCACCGTaGAGCGACGCCGCTGTCGGATGCTTTTATTCACCA +
Preference number: 6 (lower is better)
Translates to: GHFPHQSMYEPP*SDAAVGCFYSP
Trigger: TGGTGAATAAAAGCATCCGACAGCGGCGTCGCTTCACGGTGGCTCATACATGCTTTGATGTGGAAAATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000106907.9
ENSMUST00000106908.9
CDS TCA 72 bp TCTCTGGATCAATCACACAAAGCGTCTTTGTGCTGCTaGAATAGCTGTGGCCTTCTCCCTCCTTTTCCGGTC +
Preference number: 6 (lower is better)
Translates to: SLDQSHKASLCC*NSCGLLPPFPV
Trigger: GACCGGAAAAGGAGGGAGAAGGCCACAGCTATTTCAGCAGCACAAAGACGCTTTGTGTGATTGATCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS GCA 72 bp GTGAGAAGCAATGACTTAGCAGTCGACACACGAGGTTaGAGAGGACCATCGCAAGTAGCTTCCATGTATGAG +
Preference number: 6 (lower is better)
Translates to: VRSNDLAVDTRG*RGPSQVASMYE
Trigger: CTCATACATGGAAGCTACTTGCGATGGTCCTCTGCAACCTCGTGTGTCGACTGCTAAGTCATTGCTTCTCAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000174186.2
CDS CAA 72 bp CACGTAAGGGGCCGATTATGTGAGTACCCAGCCACATaGAAGATGTTAAGGCCCCATTTGTTCAGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: HVRGRLCEYPAT*KMLRPHLFRSS
Trigger: GGAAGACCTGAACAAATGGGGCCTTAACATCTTCAATGTGGCTGGGTACTCACATAATCGGCCCCTTACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106901.2
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS CAA 90 bp TACATGATGCACGTAAGGGGCCGATTATGTGAGTACCCAGCCACATaGAAGATGTTAAGGCCCCATTTGTTCAGGTCTTCCAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: YMMHVRGRLCEYPAT*KMLRPHLFRSSSSL
Trigger: CAAGGAGCTGGAAGACCTGAACAAATGGGGCCTTAACATCTTCAATGTGGCTGGGTACTCACATAATCGGCCCCTTACGTGCATCATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106901.2
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS TCA 72 bp TATTGCATACATGATGCACGTAAGGGGCCGATTATGTaGGTACCCAGCCACATTGAAGATGTTAAGGCCCCA +
Preference number: 6 (lower is better)
Translates to: YCIHDARKGPIM*VPSHIEDVKAP
Trigger: TGGGGCCTTAACATCTTCAATGTGGCTGGGTACTCACATAATCGGCCCCTTACGTGCATCATGTATGCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106901.2
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS TCA 72 bp GCTTTGGAAGCTCAAGTTCCAAGCGCATCTGCTCCTTaGAAGTCTTTATGCAAACCTCAGATTCCGAAGCAG +
Preference number: 6 (lower is better)
Translates to: ALEAQVPSASAP*KSLCKPQIPKQ
Trigger: CTGCTTCGGAATCTGAGGTTTGCATAAAGACTTTCAAGGAGCAGATGCGCTTGGAACTTGAGCTTCCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106907.9
ENSMUST00000106908.9
ENSMUST00000174186.2
CDS GCA 72 bp AAGCGTGAGATGCTTGTGTTGTTCAGGCTTGAGCTGTaGATCAGTTTCTTCACTCCACTTATCTGGGTCATG +
Preference number: 6 (lower is better)
Translates to: KREMLVLFRLEL*ISFFTPLIWVM
Trigger: CATGACCCAGATAAGTGGAGTGAAGAAACTGATGCACAGCTCAAGCCTGAACAACACAAGCATCTCACGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106901.2
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS GCA 72 bp CCTGGTAGCTTTGGAAGCTCAAGTTCCAAGCGCATCTaGTCCTTGAAAGTCTTTATGCAAACCTCAGATTCC +
Preference number: 6 (lower is better)
Translates to: PGSFGSSSSKRI*SLKVFMQTSDS
Trigger: GGAATCTGAGGTTTGCATAAAGACTTTCAAGGAGCAGATGCGCTTGGAACTTGAGCTTCCAAAGCTACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106907.9
ENSMUST00000106908.9
ENSMUST00000174186.2
CDS CCA 72 bp GTCTATGTCAGTCTCTTCCAGAGAATCCCTGTTCTCTaGATCAATCACACAAAGCGTCTTTGTGCTGCTGAA +
Preference number: 6 (lower is better)
Translates to: VYVSLFQRIPVL*INHTKRLCAAE
Trigger: TTCAGCAGCACAAAGACGCTTTGTGTGATTGATCCAGAGAACAGGGATTCTCTGGAAGAGACTGACATAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8
CDS CAA 72 bp AGCTTTGGAAGCTCAAGTTCCAAGCGCATCTGCTCCTaGAAAGTCTTTATGCAAACCTCAGATTCCGAAGCA +
Preference number: 6 (lower is better)
Translates to: SFGSSSSKRICS*KVFMQTSDSEA
Trigger: TGCTTCGGAATCTGAGGTTTGCATAAAGACTTTCAAGGAGCAGATGCGCTTGGAACTTGAGCTTCCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106907.9
ENSMUST00000106908.9
ENSMUST00000174186.2
CDS CAA 90 bp TTTCCTGGTAGCTTTGGAAGCTCAAGTTCCAAGCGCATCTGCTCCTaGAAAGTCTTTATGCAAACCTCAGATTCCGAAGCAGTAAATTCT +
Preference number: 6 (lower is better)
Translates to: FPGSFGSSSSKRICS*KVFMQTSDSEAVNS
Trigger: AGAATTTACTGCTTCGGAATCTGAGGTTTGCATAAAGACTTTCAAGGAGCAGATGCGCTTGGAACTTGAGCTTCCAAAGCTACCAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000106907.9
ENSMUST00000106908.9
ENSMUST00000174186.2
CDS TCA 72 bp TGTTCCTCTTGTAGCAATTTGAATCCCACAGCAAGGTaGTGGTTTTCCAGAACAGATTCATCATTATACATC +
Preference number: 6 (lower is better)
Translates to: CSSCSNLNPTAR*WFSRTDSSLYI
Trigger: GATGTATAATGATGAATCTGTTCTGGAAAACCATCACCTTGCTGTGGGATTCAAATTGCTACAAGAGGAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000030251.13
ENSMUST00000097949.11
ENSMUST00000097950.9
ENSMUST00000106901.2
ENSMUST00000106904.9
ENSMUST00000106908.9
ENSMUST00000106911.8