Pregenerated sensors for PDE3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030671Ensembl transcript IDs: ENSMUST00000032909.9
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAAGGTCCTCAGTCCTTCCTCGATGAAGCCAGGAGAACCACACTaGACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACC | + |
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Preference number: 1 (lower is better) Translates to: TKVLSPSSMKPGEPH*TVCCHEQKSLRKAT Trigger: GGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGTGGTTCTCCTGGCTTCATCGAGGAAGGACTGAGGACCTTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR GCA 90 bp | AGAATCAGTTTCTTGTTTGTAATGAAAGTGCTTAGGAGTGAGAACTaGCAGGGTAGCCAGGATCCTCTCACAGTATTAAGGCGTGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: RISFLFVMKVLRSEN*QGSQDPLTVLRRAH Trigger: GTGGGCACGCCTTAATACTGTGAGAGGATCCTGGCTACCCTGGCAGTTCTCACTCCTAAGCACTTTCATTACAAACAAGAAACTGATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR TCA 90 bp | CCGAAGTCACTTGACTTTTCAGTTTTAGCCTTCCCTCCCTCATCATaGGAAATAAGAGCTCACTACCCAGCAAAGCAGCATTATGACACA | + |
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Preference number: 1 (lower is better) Translates to: PKSLDFSVLAFPPSS*EIRAHYPAKQHYDT Trigger: TGTGTCATAATGCTGCTTTGCTGGGTAGTGAGCTCTTATTTCTCATGATGAGGGAGGGAAGGCTAAAACTGAAAAGTCAAGTGACTTCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR TCA 90 bp | CTCATCATGAGAAATAAGAGCTCACTACCCAGCAAAGCAGCATTATaGCACACTATTTACACACCAGTGAAGGCTTTGAGGAAGGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LIMRNKSSLPSKAAL*HTIYTPVKALRKAL Trigger: CAAAGCCTTCCTCAAAGCCTTCACTGGTGTGTAAATAGTGTGTCATAATGCTGCTTTGCTGGGTAGTGAGCTCTTATTTCTCATGATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR TCA 90 bp | GAACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATaGATTCATTTTTGTATTAAGCATAGAGGTCTGTTTCTTGCACCA | + |
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Preference number: 1 (lower is better) Translates to: EQCAATSRNHSERPP*IHFCIKHRGLFLAP Trigger: TGGTGCAAGAAACAGACCTCTATGCTTAATACAAAAATGAATTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR CCA 90 bp | TCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTaGGTGTTGACATCTCCCAACAGTGTGTATGTGTGGTTAAATGTG | + |
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Preference number: 1 (lower is better) Translates to: SLCSLCLDDLLIGES*VLTSPNSVYVWLNV Trigger: CACATTTAACCACACATACACACTGTTGGGAGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGCCAGGAGAACCACACTaGACAGTGTGCTGCCACGAG | + |
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Preference number: 2 (lower is better) Translates to: ISLCSLCLDDLLIGESWVPGEPH*TVCCHE Trigger: CTCGTGGCAGCACACTGTTCAGTGTGGTTCTCCTGG...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR GCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTCACAGTATTAAGGCGTaGCCACATGGGAATGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLHSIKA*PHGNGQ Trigger: CTGACCATTCCCATGTGGGCACGCCTTAATACTGTG...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR GCA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTGTGATGTGTCATCTCTaGCATGTACTCTTGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CSLCLDDLLIGESWVLTSVMCHL*HVLLKQ Trigger: CTGCTTCAAGAGTACATGGCAGAGATGACACATCAC...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR CCA 90 bp | CTAAGAATCAGTTTCTTGTTTGTAATGAAAGTGCTTAGGAGTGAGAACTGCCAGGTGCCCACATGGGAATaGTCAGTTGAGAATCAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LRISFLFVMKVLRSENCQVPTWE*SVENQY Trigger: GTACTGATTCTCAACTGACCATTCCCATGTGGGCAC...CTGGCAGTTCTCACTCCTAAGCACTTTCATTACAAACAAGAAACTGATTCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCAGCAAAGCAGCATTATaGCACACTATTTACACACCA | + |
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Preference number: 2 (lower is better) Translates to: LACILCPFAWKIFFQPLLSKAAL*HTIYTP Trigger: TGGTGTGTAAATAGTGTGTCATAATGCTGCTTTGCT...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR TCA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCAAAAGGAAAGAAGAGTaGCAGGGAAAACGCTTTCAA | + |
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Preference number: 2 (lower is better) Translates to: LACILCPFAWKIFFQPLLKRKEE*QGKRFQ Trigger: TTGAAAGCGTTTTCCCTGTCACTCTTCTTTCCTTTT...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR GCA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTAAATGTGGGTGCCATTaGATTTGGGGGCATAGATAT | + |
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Preference number: 2 (lower is better) Translates to: CSLCLDDLLIGESWVLTSKCGCH*IWGHRY Trigger: ATATCTATGCCCCCAAATGCAATGGCACCCACATTT...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR CCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGGCTCAATCCAAACAATaGCTTCCCATTGTTTCTATC | + |
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Preference number: 2 (lower is better) Translates to: ISLCSLCLDDLLIGESWVAQSKQ*LPIVSI Trigger: GATAGAAACAATGGGAAGCCATTGTTTGGATTGAGC...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTTTCCCTCCCTCATCATaGGAAATAAGAGCTCACTAC | + |
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Preference number: 2 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLFPPSS*EIRAHY Trigger: GTAGTGAGCTCTTATTTCTCATGATGAGGGAGGGAA...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR GCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGCATCTTGTGTCCATTTaGTTGGAAAATCTTTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: ISLCSLCLDDLLIGESWVHLVSI*LENLFP Trigger: TGGAAAAAGATTTTCCAAGCAAATGGACACAAGATG...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR CCA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTCATAGATATTCAGAATaGAGATGTCATCTTGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: CSLCLDDLLIGESWVLTSHRYSE*RCHLGR Trigger: TCTACCAAGATGACATCTCCATTCTGAATATCTATG...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR TCA 72 bp | CTCAGTCCTTCCTCGATGAAGCCAGGAGAACCACACTaGACAGTGTGCTGCCACGAGCAGAAATCACTCAGA | + |
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Preference number: 3 (lower is better) Translates to: LSPSSMKPGEPH*TVCCHEQKSLR Trigger: TCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGTGGTTCTCCTGGCTTCATCGAGGAAGGACTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCCATGGGAATGGTCAGTaGAGAATCAGTACAGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: LACILCPFAWKIFFQPLLHGNGQ*RISTVS Trigger: GCTCACTGTACTGATTCTCAACTGACCATTCCCATG...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR CAA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTGCTTTGAGGAAGGCTTaGCAGCATGAGTCAACTGCA | + |
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Preference number: 3 (lower is better) Translates to: CSLCLDDLLIGESWVLTSALRKA*QHESTA Trigger: TGCAGTTGACTCATGCTGCAAAGCCTTCCTCAAAGC...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR CAA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTACACCAGTGAAGGCTTaGAGGAAGGCTTTGCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: CSLCLDDLLIGESWVLTSTPVKA*RKALQH Trigger: ATGCTGCAAAGCCTTCCTCAAAGCCTTCACTGGTGT...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR CAA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCATAGAGGTCTGTTTCTaGCACCACCCCACCCCCAAA | + |
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Preference number: 3 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIIEVCF*HHPTPK Trigger: TTTGGGGGTGGGGTGGTGCAAGAAACAGACCTCTAT...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR TCA 72 bp | CTTGACTTTTCAGTTTTAGCCTTCCCTCCCTCATCATaGGAAATAAGAGCTCACTACCCAGCAAAGCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: LDFSVLAFPPSS*EIRAHYPAKQH Trigger: ATGCTGCTTTGCTGGGTAGTGAGCTCTTATTTCTCATGATGAGGGAGGGAAGGCTAAAACTGAAAAGTCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR GCA 72 bp | TTCTTGTTTGTAATGAAAGTGCTTAGGAGTGAGAACTaGCAGGGTAGCCAGGATCCTCTCACAGTATTAAGG | + |
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Preference number: 3 (lower is better) Translates to: FLFVMKVLRSEN*QGSQDPLTVLR Trigger: CCTTAATACTGTGAGAGGATCCTGGCTACCCTGGCAGTTCTCACTCCTAAGCACTTTCATTACAAACAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR TCA 72 bp | AGAAATAAGAGCTCACTACCCAGCAAAGCAGCATTATaGCACACTATTTACACACCAGTGAAGGCTTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: RNKSSLPSKAAL*HTIYTPVKALR Trigger: CCTCAAAGCCTTCACTGGTGTGTAAATAGTGTGTCATAATGCTGCTTTGCTGGGTAGTGAGCTCTTATTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR TCA 72 bp | GCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATaGATTCATTTTTGTATTAAGCATAGAGGTCTGTTT | + |
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Preference number: 3 (lower is better) Translates to: AATSRNHSERPP*IHFCIKHRGLF Trigger: AAACAGACCTCTATGCTTAATACAAAAATGAATTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR CAA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCAAAAAGCATCAGAAATaGATGCATCTGGGTTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: LACILCPFAWKIFFQPLLKKHQK*MHLGFA Trigger: AGCAAAACCCAGATGCATCAATTTCTGATGCTTTTT...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR CCA 72 bp | AGGTATCTTTCAAAGGCAGAAGCTCAATCCAAACAATaGCTTCCCATTGTTTCTATCAGTTGTAATACAGGG | + |
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Preference number: 3 (lower is better) Translates to: RYLSKAEAQSKQ*LPIVSISCNTG Trigger: CCCTGTATTACAACTGATAGAAACAATGGGAAGCCATTGTTTGGATTGAGCTTCTGCCTTTGAAAGATACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR TCA 72 bp | TCCAGCATCACACTATATAGGAAATACTGTGGAAACTaGCAGTTAACTGTGCACAAAGTTCAATGGCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: SSITLYRKYCGN*QLTVHKVQWLQ Trigger: TTGAAGCCATTGAACTTTGTGCACAGTTAACTGTCAGTTTCCACAGTATTTCCTATATAGTGTGATGCTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR-3UTR CAA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTCTCTGCCATGTACTCTaGAAGCAGAAAGATATTAAC | + |
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Preference number: 3 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLLCHVL*KQKDIN Trigger: GTTAATATCTTTCTGCTTCAAGAGTACATGGCAGAG...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR TCA 72 bp | ATATTTAGGCAATATCTTCGATGGGATTGGTTTCATTaGTTTTCCATTAAGGCAAAAGATGGCCAGCTCCTT | + |
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Preference number: 3 (lower is better) Translates to: IFRQYLRWDWFH*FSIKAKDGQLL Trigger: AAGGAGCTGGCCATCTTTTGCCTTAATGGAAAATCAATGAAACCAATCCCATCGAAGATATTGCCTAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | ACACTGAACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATGAACCGGCGGCTCCACGTTaGAGAAGCGGCAGAGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: TLNSVLPRAEITQKGHHEPAAPR*RSGRGG Trigger: TCCACCTCTGCCGCTTCTGCAACGTGGAGCCGCCGG...TTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | GCTTTGCAGCATGAGTCAACTGCAGCAAGCTCTAAGAATCAGTTTCTTGTTTGTACGACAGCAGAGGCCTaGGCGCGGGCGGCAGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ALQHESTAASSKNQFLVCTTAEA*ARAAEP Trigger: GGGCTCTGCCGCCCGCGCTCAGGCCTCTGCTGTCGT...ACAAACAAGAAACTGATTCTTAGAGCTTGCTGCAGTTGACTCATGCTGCAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | CTAAGAATCAGTTTCTTGTTTGTAATGAAAGTGCTTAGGAGTGAGAACTGCCAGCTGCGCGGAGGGTCCTaGCGCAGCGGGCTCACGCAG | + |
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Preference number: 4 (lower is better) Translates to: LRISFLFVMKVLRSENCQLRGGS*RSGLTQ Trigger: CTGCGTGAGCCCGCTGCGGCAGGACCCTCCGCGCAG...CTGGCAGTTCTCACTCCTAAGCACTTTCATTACAAACAAGAAACTGATTCTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCGGTGGAAGAAGAAGCTaGGCGGAGGGTCCTGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: LACILCPFAWKIFFQPLLGGRRS*AEGPAA Trigger: TGCGGCAGGACCCTCCGCGCAGCTTCTTCTTCCACC...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | ACACTGAACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATGAACCTCAGCTGTGGAGTTaGGAAACTGGTTCTGCCACT | + |
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Preference number: 4 (lower is better) Translates to: TLNSVLPRAEITQKGHHEPQLWS*ETGSAT Trigger: AGTGGCAGAACCAGTTTCCCAACTCCACAGCTGAGG...TTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | ACACTGAACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATGAATCTTGTGGTTTTCAGTaGGGTGGTGCATTAGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: TLNSVLPRAEITQKGHHESCGFQ*GGALVG Trigger: GCCAACTAATGCACCACCTCACTGAAAACCACAAGA...TTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | GCTTTGCAGCATGAGTCAACTGCAGCAAGCTCTAAGAATCAGTTTCTTGTTTGTACCTCCTCCGGGGTCTaGTCACAGGCACTTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: ALQHESTAASSKNQFLVCTSSGV*SQALFP Trigger: AGGAAAAAGTGCCTGTGATCAGACCCCGGAGGAGGT...ACAAACAAGAAACTGATTCTTAGAGCTTGCTGCAGTTGACTCATGCTGCAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGGCAACGACGGTCTCCTaGACATCTTGCCACTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: ISLCSLCLDDLLIGESWVATTVS*TSCHCH Trigger: ATGGCAGTGGCAAGATGTTCAGGAGACCGTCGTTGC...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTCCGCAGAGAAGAAATaGCTTGTGGGGGAAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: ISLCSLCLDDLLIGESWVSAEKK*LVGEGL Trigger: CAAGCCTTCCCCCACAAGTCATTTCTTCTCTGCGGA...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCTCAGAAGACTGTGGCTaGGCAAAGCACCAGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LACILCPFAWKIFFQPLLSEDCG*AKHQLF Trigger: GAAGAGCTGGTGCTTTGCCCAGCCACAGTCTTCTGA...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | ACACTGAACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATGAAGAGGAAGTTGTACTCTaGGCGAGAAAGATACAGATT | + |
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Preference number: 4 (lower is better) Translates to: TLNSVLPRAEITQKGHHEEEVVL*ARKIQI Trigger: AATCTGTATCTTTCTCGCCCAGAGTACAACTTCCTC...TTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTTGGCCTACAGGAACCTaGGAAAGCACCCATCAAGCT | + |
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Preference number: 4 (lower is better) Translates to: CSLCLDDLLIGESWVLTSWPTGT*ESTHQA Trigger: AGCTTGATGGGTGCTTTCTCAGGTTCCTGTAGGCCA...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | CTAAGAATCAGTTTCTTGTTTGTAATGAAAGTGCTTAGGAGTGAGAACTGCCAGTCTGTTTCTATCCACTaGCCCGGCAGCAAGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LRISFLFVMKVLRSENCQSVSIH*PGSKPA Trigger: TGCTGGCTTGCTGCCGGGTCAGTGGATAGAAACAGA...CTGGCAGTTCTCACTCCTAAGCACTTTCATTACAAACAAGAAACTGATTCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGGTGGAGTTGGGAAACTaGTTCTGCCACTCAATCCCT | + |
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Preference number: 4 (lower is better) Translates to: ISLCSLCLDDLLIGESWVVELGN*FCHSIP Trigger: AGGGATTGAGTGGCAGAACCAGTTTCCCAACTCCAC...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCCACCTGATTTTTCACTaGGGTGGTCTGTACCATCGG | + |
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Preference number: 4 (lower is better) Translates to: LACILCPFAWKIFFQPLLHLIFH*GGLYHR Trigger: CCGATGGTACAGACCACCCCAGTGAAAAATCAGGTG...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGAATTTGATGCACACCTaGCAGACCAAGAGGCGATCG | + |
|
Preference number: 4 (lower is better) Translates to: ISLCSLCLDDLLIGESWVNLMHT*QTKRRS Trigger: CGATCGCCTCTTGGTCTGCCAGGTGTGCATCAAATT...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTGCTGTCTTCTTCACCTaGTTTTTCACTGGGGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSLCLDDLLIGESWVLTSAVFFT*FFTGVV Trigger: GACCACCCCAGTGAAAAATCAGGTGAAGAAGACAGC...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTACCTCTTACCACTGCTaGGATCCCACCTTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CSLCLDDLLIGESWVLTSTSYHC*DPTLNS Trigger: ACTGTTCAAGGTGGGATCGCAGCAGTGGTAAGAGGT...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | ACACTGAACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATGAACTTTTGAGAAAACACTaGTGTCTTCTTCACCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLNSVLPRAEITQKGHHELLRKH*CLLHLI Trigger: AATCAGGTGAAGAAGACAGCAGTGTTTTCTCAAAAG...TTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTGAGGCATTATCCACCTaGAGTTTGTTCCCCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLCLDDLLIGESWVLTSEALST*SLFPSA Trigger: AGCTGAGGGGAACAAACTGCAGGTGGATAATGCCTC...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | ACACTGAACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATGAAATGGTCTCTTCTTCTTaGGTTTCCACAATGTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TLNSVLPRAEITQKGHHEMVSSS*VSTMFN Trigger: ATTGAACATTGTGGAAACCCAAGAAGAAGAGACCAT...TTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| 3UTR CAA 72 bp | ACTATTTACACACCAGTGAAGGCTTTGAGGAAGGCTTaGCAGCATGAGTCAACTGCAGCAAGCTCTAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TIYTPVKALRKA*QHESTAASSKN Trigger: ATTCTTAGAGCTTGCTGCAGTTGACTCATGCTGCAAAGCCTTCCTCAAAGCCTTCACTGGTGTGTAAATAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCGTCAATCAGCAGGTCTaGCACCATATTGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIVNQQV*HHIASF Trigger: GAAGCTCGCAATATGGTGTCAGACCTGCTGATTGAC...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR TCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTGCTGCGATCCCACCTTaGACAGTGCTCATTAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLAAIPP*TVLISQ Trigger: CTGACTAATGAGCACTGTTCAAGGTGGGATCGCAGC...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGCACTGGTACATGGCTTaGAGAATTCAGAAGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISLCSLCLDDLLIGESWVHWYMA*RIQKTV Trigger: CACAGTCTTCTGAATTCTTCAAGCCATGTACCAGTG...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR TCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGGCCTCTTCCATCAGGTaGCTATCACCTTCCAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISLCSLCLDDLLIGESWVASSIR*LSPSKN Trigger: ATTTTTGGAAGGTGATAGTCACCTGATGGAAGAGGC...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR GCA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCGGCGATCGTTTTCACTaGTCCATTCTATACCGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LACILCPFAWKIFFQPLLGDRFH*SILYRY Trigger: GTAACGGTATAGAATGGAGCAGTGAAAACGATCGCC...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CCA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCTCCTTCCATATCTTGTaGTTTTCAGTGAGGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LACILCPFAWKIFFQPLLSFHIL*FSVRWC Trigger: GCACCACCTCACTGAAAACCACAAGATATGGAAGGA...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR GCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTAAGACCTCTTACCACTaGTGCGATCCCACCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLKTSYH*CDPTLN Trigger: GTTCAAGGTGGGATCGCAGCAGTGGTAAGAGGTCTT...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTGAATTCAGAAGACTGTaGCTGGGCAAAGCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLEFRRL*LGKAPA Trigger: AGCTGGTGCTTTGCCCAGCCACAGTCTTCTGAATTC...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCTGCAGGCTTTCTTCATaGTCTCTTCTTCTTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LACILCPFAWKIFFQPLLCRLSS*SLLLGF Trigger: AAACCCAAGAAGAAGAGACCATGAAGAAAGCCTGCA...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CCA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCAGGTGGTGCATTAGTTaGCAAAATATTCGCCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIRWCIS*QNIRRL Trigger: CAGGCGGCGAATATTTTGCCAACTAATGCACCACCT...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTGCAGCATGAGTCAACTGCAGCAAGCTCTAAGAATCAGTTTCTTGTTTGTAAAATCGAAACCGCTTaGATTCCATGTGATCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALQHESTAASSKNQFLVCKIETA*IPCDQG Trigger: ACCTTGATCACATGGAATTCAAGCGGTTTCGATTTT...ACAAACAAGAAACTGATTCTTAGAGCTTGCTGCAGTTGACTCATGCTGCAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCTGGAGTTTTGCTAGTTaGGGAGAAGAACGATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIWSFAS*GEERSM Trigger: CATGGATCGTTCTTCTCCTCAACTAGCAAAACTCCA...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR GCA 90 bp | CTAAGAATCAGTTTCTTGTTTGTAATGAAAGTGCTTAGGAGTGAGAACTGCCAGGGTCTGACACCATATTaGGAGCTTCATTTAGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRISFLFVMKVLRSENCQGLTPY*ELHLAL Trigger: CAGTGCTAAATGAAGCTCGCAATATGGTGTCAGACC...CTGGCAGTTCTCACTCCTAAGCACTTTCATTACAAACAAGAAACTGATTCTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCAGAAGAAATGACTTGTaGGGGAAGGCTTGGGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIRRNDL*GKAWVN Trigger: ATTGACCCAAGCCTTCCCCCACAAGTCATTTCTTCT...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTAGGGGGCCCACAATGTaGGTGATAAAAGATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLRGPTM*VIKDSW Trigger: CCAAGAATCTTTTATCACCCACATTGTGGGCCCCCT...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTGTGGCATCCATGACTTaGAACACTGAGTTCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLVASMT*NTEFLV Trigger: TACCAAGAACTCAGTGTTTCAAGTCATGGATGCCAC...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCTTTAGGTGGCATCCATaGCTTGAAACACTGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIFRWHP*LETLSS Trigger: AGAACTCAGTGTTTCAAGTCATGGATGCCACCTAAA...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGATGTTGAAACATATTTaGGTATTTGGTGTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ISLCSLCLDDLLIGESWVMLKHI*VFGVHS Trigger: GCTGTGGACACCAAATACTCAAATATGTTTCAACAT...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | GCTTTGCAGCATGAGTCAACTGCAGCAAGCTCTAAGAATCAGTTTCTTGTTTGTAAAGTATACATAACCTaGCTGAGAATCCTTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALQHESTAASSKNQFLVCKVYIT*LRILPD Trigger: ATCAGGAAGGATTCTCAGTCAGGTTATGTATACTTT...ACAAACAAGAAACTGATTCTTAGAGCTTGCTGCAGTTGACTCATGCTGCAAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | CTAAGAATCAGTTTCTTGTTTGTAATGAAAGTGCTTAGGAGTGAGAACTGCCAGCATTGGCCTTGGCATTaGATTCTGCAAGGAAATCAA | + |
|
Preference number: 4 (lower is better) Translates to: LRISFLFVMKVLRSENCQHWPWH*ILQGNQ Trigger: TTGATTTCCTTGCAGAATTCAATGCCAAGGCCAATG...CTGGCAGTTCTCACTCCTAAGCACTTTCATTACAAACAAGAAACTGATTCTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCCCAAAAATAACTCCCTaGAGGCTTTCTTCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIPKITP*RLSSWS Trigger: AGACCATGAAGAAAGCCTGCAGGGAGTTATTTTTGG...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | CTAAGAATCAGTTTCTTGTTTGTAATGAAAGTGCTTAGGAGTGAGAACTGCCAGAAAATATTCGCCGCCTaGCTTTCCTTCTTTGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRISFLFVMKVLRSENCQKIFAA*LSFFVV Trigger: AACCACAAAGAAGGAAAGGCAGGCGGCGAATATTTT...CTGGCAGTTCTCACTCCTAAGCACTTTCATTACAAACAAGAAACTGATTCTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTCATGTAGGACATCTGTaGCATGCACACGATTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLHVGHL*HAHDCD Trigger: ATCACAATCGTGTGCATGCCACAGATGTCCTACATG...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR TCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTATACAGATTCCAAGCTaGTGCAGCATGATGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLIQIPS*CSMMIL Trigger: GAGAATCATCATGCTGCATCAGCTTGGAATCTGTAT...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCTGGTTTTCAGTGAGGTaGTGCATTAGTTGGCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIWFSVR*CISWQN Trigger: ATTTTGCCAACTAATGCACCACCTCACTGAAAACCA...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCACAGACGATGACCTCTaGTTTGGAATTGTAAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EIMPIFDVEVSFKGRSSITDDDL*FGIVKR Trigger: TCTTTTTACAATTCCAAAGCAGAGGTCATCGTCTGT...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTCTGCACTTGATACACTaGCCAGTGATCTATGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLLHLIH*PVIYVK Trigger: TTTTACATAGATCACTGGGCAGTGTATCAAGTGCAG...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR CCA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCCATCTGAATCTGCTTTaGTTTCCGTTTCATGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIHLNLL*FPFHGY Trigger: ATAACCATGAAACGGAAACCAAAGCAGATTCAGATG...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| 3UTR CAA 72 bp | TTATTAGATATTAGAATGGCTACTCTAGCTTGCATCTaGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLDIRMATLACI*CPFAWKIFFQP Trigger: GGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAGAGTAGCCATTCTAATATCTAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| 3UTR CAA 72 bp | ATAATGTCTGTTAGTTCCATTATCTCTCTGTGTAGTTaGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: IMSVSSIISLCS*CLDDLLIGESW Trigger: CCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGATAATGGAACTAACAGACATTAT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS-3UTR GCA 90 bp | CTAAGAATCAGTTTCTTGTTTGTAATGAAAGTGCTTAGGAGTGAGAACTGCCAGTTTTCAGTGAGGTGGTaGATTAGTTGGCAAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: LRISFLFVMKVLRSENCQFSVRW*ISWQNI Trigger: AATATTTTGCCAACTAATGCACCACCTCACTGAAAA...CTGGCAGTTCTCACTCCTAAGCACTTTCATTACAAACAAGAAACTGATTCTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 90 bp | CAGCGCGGCCAGGACAAAGGCGGCCAGGACGCCGAGCGAGAGGCGTaGCCCGGCGCGGAGCGAGGCCGCCGGCGGCTCCACGTTGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QRGQDKGGQDAEREA*PGAERGRRRLHVAE Trigger: TTCTGCAACGTGGAGCCGCCGGCGGCCTCGCTCCGCGCCGGGGCACGCCTCTCGCTCGGCGTCCTGGCCGCCTTTGTCCTGGCCGCGCTG 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 90 bp | CCGGCGGCTCCACGTTGCAGAAGCGGCAGAGGTGGAAGAAGAAGCTaGGCGGAGGGTCCTGCCGCAGCGGGCTCACGCAGCTCTTCACGT | + |
|
Preference number: 5 (lower is better) Translates to: PAAPRCRSGRGGRRS*AEGPAAAGSRSSSR Trigger: ACGTGAAGAGCTGCGTGAGCCCGCTGCGGCAGGACCCTCCGCGCAGCTTCTTCTTCCACCTCTGCCGCTTCTGCAACGTGGAGCCGCCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 90 bp | CTGCGCTTTCTCCCAGCGACACGCAGCTGGACCTCCTCCGGGGTCTaGTCACAGGCACTTTTTCCTCCGCGGTACTCGCCGAGCGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LRFLPATRSWTSSGV*SQALFPPRYSPSAA Trigger: CGCCGCGCTCGGCGAGTACCGCGGAGGAAAAAGTGCCTGTGATCAGACCCCGGAGGAGGTCCAGCTGCGTGTCGCTGGGAGAAAGCGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 90 bp | CAACGACGGTCTCCTGAACATCTTGCCACTGCCATAGTAACCGGCTaGGCTTTCTCCCAGCGACACGCAGCTGGACCTCCTCCGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QRRSPEHLATAIVTG*AFSQRHAAGPPPGS Trigger: AGACCCCGGAGGAGGTCCAGCTGCGTGTCGCTGGGAGAAAGCGCAGCCGGTTACTATGGCAGTGGCAAGATGTTCAGGAGACCGTCGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CCA 90 bp | GAGCCAGCAGACACTGGTACATGGCTTGAAGAATTCAGAAGACTGTaGCTGGGCAAAGCACCAGCTCTTCTCAGACCTGCATGGTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: EPADTGTWLEEFRRL*LGKAPALLRPAWCV Trigger: GACGCACCATGCAGGTCTGAGAAGAGCTGGTGCTTTGCCCAGCCACAGTCTTCTGAATTCTTCAAGCCATGTACCAGTGTCTGCTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 90 bp | AGAGGATCATCTGTTCTCGGGAAATACAAGGCAACGACGGTCTCCTaGACATCTTGCCACTGCCATAGTAACCGGCTGCGCTTTCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGSSVLGKYKATTVS*TSCHCHSNRLRFLP Trigger: TGGGAGAAAGCGCAGCCGGTTACTATGGCAGTGGCAAGATGTTCAGGAGACCGTCGTTGCCTTGTATTTCCCGAGAACAGATGATCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CCA 90 bp | AGAAGACTGTGGCTGGGCAAAGCACCAGCTCTTCTCAGACCTGCATaGTGCGTCAGTGACACAGACGATGACCTCTGCTTTGGAATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RRLWLGKAPALLRPA*CVSDTDDDLCFGIV Trigger: TACAATTCCAAAGCAGAGGTCATCGTCTGTGTCACTGACGCACCATGCAGGTCTGAGAAGAGCTGGTGCTTTGCCCAGCCACAGTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | ACACTGAACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATGAATCCTCAGCTGTGGAGTaGGGAAACTGGTTCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TLNSVLPRAEITQKGHHESSAVE*GNWFCH Trigger: GTGGCAGAACCAGTTTCCCAACTCCACAGCTGAGGA...TTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 90 bp | AGGCTCCAGAGCTCCTCCTCAGCTGTGGAGTTGGGAAACTGGTTCTaGCACTCAATCCCTTGTGAAGTTTTCGATCTCCTTTCTCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RLQSSSSAVELGNWF*HSIPCEVFDLLSQL Trigger: CAGTTGAGAAAGGAGATCGAAAACTTCACAAGGGATTGAGTGGCAGAACCAGTTTCCCAACTCCACAGCTGAGGAGGAGCTCTGGAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTGCCGGCGGCTCCACGTaGCAGAAGCGGCAGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLAGGST*QKRQRW Trigger: CCACCTCTGCCGCTTCTGCAACGTGGAGCCGCCGGC...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CCA 90 bp | CCTATGGGTGATCGATTAGTTAGAGAGCCAGCAGACACTGGTACATaGCTTGAAGAATTCAGAAGACTGTGGCTGGGCAAAGCACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PMGDRLVREPADTGT*LEEFRRLWLGKAPA Trigger: AGCTGGTGCTTTGCCCAGCCACAGTCTTCTGAATTCTTCAAGCCATGTACCAGTGTCTGCTGGCTCTCTAACTAATCGATCACCCATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 90 bp | CTTGTGGGGGAAGGCTTGGGTCAATCAGCAGGTCTGACACCATATTaGGAGCTTCATTTAGCACTGAAAGATCAACTCCATTTCCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVGEGLGQSAGLTPY*ELHLALKDQLHFHL Trigger: GAGGTGGAAATGGAGTTGATCTTTCAGTGCTAAATGAAGCTCGCAATATGGTGTCAGACCTGCTGATTGACCCAAGCCTTCCCCCACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | ACACTGAACAGTGTGCTGCCACGAGCAGAAATCACTCAGAAAGGCCACCATGAATTGATATCTGCTAATTaGATGCACACCTGGCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TLNSVLPRAEITQKGHHELISAN*MHTWQT Trigger: GGTCTGCCAGGTGTGCATCAAATTAGCAGATATCAA...TTCATGGTGGCCTTTCTGAGTGATTTCTGCTCGTGGCAGCACACTGTTCAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 90 bp | TGTCCACAGCTGCTACACAGATTGCTGTCAGAGTTCCTAAGGTACTaGTGGAAATCTGCTGCACTTGATACACTGCCCAGTGATCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: CPQLLHRLLSEFLRY*WKSAALDTLPSDLC Trigger: ACATAGATCACTGGGCAGTGTATCAAGTGCAGCAGATTTCCATCAGTACCTTAGGAACTCTGACAGCAATCTGTGTAGCAGCTGTGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 90 bp | CACTGGGGTGGTCTGTACCATCGGGTTCACATGTTGAAACATATTTaGGTATTTGGTGTCCACAGCTGCTACACAGATTGCTGTCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HWGGLYHRVHMLKHI*VFGVHSCYTDCCQS Trigger: ACTCTGACAGCAATCTGTGTAGCAGCTGTGGACACCAAATACTCAAATATGTTTCAACATGTGAACCCGATGGTACAGACCACCCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCCTTGTGGGGGAAGGCTaGGGTCAATCAGCAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EIMPIFDVEVSFKGRSSILVGEG*GQSAGL Trigger: CAGACCTGCTGATTGACCCAAGCCTTCCCCCACAAG...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGCAGAGAAGAAATGACTaGTGGGGGAAGGCTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISLCSLCLDDLLIGESWVQRRND*WGKAWV Trigger: GACCCAAGCCTTCCCCCACAAGTCATTTCTTCTCTG...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCCAGCTGCTACACAGATaGCTGTCAGAGTTCCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LACILCPFAWKIFFQPLLQLLHR*LSEFLR Trigger: CCTTAGGAACTCTGACAGCAATCTGTGTAGCAGCTG...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 90 bp | CTTCTCAGACCTGCATGGTGCGTCAGTGACACAGACGATGACCTCTaGTTTGGAATTGTAAAAAGATTTGAACTAAAAGGCCCATTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLRPAWCVSDTDDDL*FGIVKRFELKGPFR Trigger: CCTAAATGGGCCTTTTAGTTCAAATCTTTTTACAATTCCAAAGCAGAGGTCATCGTCTGTGTCACTGACGCACCATGCAGGTCTGAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 90 bp | CCATCTGAATCTGCTTTGGTTTCCGTTTCATGGTTATTATGGATCTaGGGTAAGCCAGGAATTGGTCGGGTTGTCAAATACCAAACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSESALVSVSWLLWI*GKPGIGRVVKYQTA Trigger: TGCTGTTTGGTATTTGACAACCCGACCAATTCCTGGCTTACCTCAGATCCATAATAACCATGAAACGGAAACCAAAGCAGATTCAGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CCA 90 bp | ATTTCCTTCCATATCTTGTGGTTTTCAGTGAGGTGGTGCATTAGTTaGCAAAATATTCGCCGCCTGCCTTTCCTTCTTTGTGGTTTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ISFHILWFSVRWCIS*QNIRRLPFLLCGLG Trigger: TCCTAAACCACAAAGAAGGAAAGGCAGGCGGCGAATATTTTGCCAACTAATGCACCACCTCACTGAAAACCACAAGATATGGAAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCCAGGAATTGGTCGGGTaGTCAAATACCAAACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LACILCPFAWKIFFQPLLQELVG*SNTKQH Trigger: ATGCTGTTTGGTATTTGACAACCCGACCAATTCCTG...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 90 bp | TCCAGGAAATGGTGTAAAAGAATTAATCTTTGGCCTACAGGAACCTaGGAAAGCACCCATCAAGCTACTGATACTCCGCAGAGAAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: SRKWCKRINLWPTGT*ESTHQATDTPQRRN Trigger: ATTTCTTCTCTGCGGAGTATCAGTAGCTTGATGGGTGCTTTCTCAGGTTCCTGTAGGCCAAAGATTAATTCTTTTACACCATTTCCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CCA 90 bp | TGTAAGCAATCTGTCCAGAACCAAGTCTACCATCTGAATCTGCTTTaGTTTCCGTTTCATGGTTATTATGGATCTGAGGTAAGCCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: CKQSVQNQVYHLNLL*FPFHGYYGSEVSQE Trigger: TTCCTGGCTTACCTCAGATCCATAATAACCATGAAACGGAAACCAAAGCAGATTCAGATGGTAGACTTGGTTCTGGACAGATTGCTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGCATGGTCTCTTCTTCTaGGGTTTCCACAATGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ISLCSLCLDDLLIGESWVHGLFF*GFHNVQ Trigger: TTGAACATTGTGGAAACCCAAGAAGAAGAGACCATG...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTGAGGTAAGCCAGGAATaGGTCGGGTTGTCAAATACC | + |
|
Preference number: 5 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLEVSQE*VGLSNT Trigger: GGTATTTGACAACCCGACCAATTCCTGGCTTACCTC...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCAGGTTAAGGAGGAAGTaGTACTCTGGGCGAGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIRLRRK*YSGRER Trigger: TCTTTCTCGCCCAGAGTACAACTTCCTCCTTAACCT...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | GAGATAATGCCTATCTTTGATGTTGAGGTATCTTTCAAAGGCAGAAGCTCAATCAGGTCTGACACCATATaGCGAGCTTCATTTAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: EIMPIFDVEVSFKGRSSIRSDTI*RASFST Trigger: AGTGCTAAATGAAGCTCGCAATATGGTGTCAGACCT...GATTGAGCTTCTGCCTTTGAAAGATACCTCAACATCAAAGATAGGCATTATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCTTGCATCTTGTGTCCATTTGCTTGGAAAATCTTTTTCCAGCCCTTACTCAATCTTCTACTAACATaGGATCCAGTGACACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LACILCPFAWKIFFQPLLNLLLT*DPVTLP Trigger: AGGAAGTGTCACTGGATCCAATGTTAGTAGAAGATT...GAGTAAGGGCTGGAAAAAGATTTTCCAAGCAAATGGACACAAGATGCAAGCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCTGTGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTCTTTTGCTGGGCCATaGATATCTGCTAATTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ISLCSLCLDDLLIGESWVSFAGP*ISANLM Trigger: CATCAAATTAGCAGATATCAATGGCCCAGCAAAAGA...CACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACACAGAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTAACATATTTGAGTATTaGGTGTCCACAGCTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: CSLCLDDLLIGESWVLTSNIFEY*VSTAAT Trigger: TGTAGCAGCTGTGGACACCAAATACTCAAATATGTT...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGTTTGTGTCTGGATGATCTGTTAATTGGTGAGAGTTGGGTGTTGACATCTAAGATTCTTGGAGTTTaGCTAGTTGAGGAGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CSLCLDDLLIGESWVLTSKILGV*LVEEKN Trigger: GTTCTTCTCCTCAACTAGCAAAACTCCAAGAATCTT...AGATGTCAACACCCAACTCTCACCAATTAACAGATCATCCAGACACAAACTACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTTTATCCACCTGCAGTTaGTTCCCCTCAGCTTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLLSTCS*FPSALH Trigger: ATGTAAAGCTGAGGGGAACAAACTGCAGGTGGATAA...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS-3UTR CAA 90 bp | ATTTGGGGGCATAGATATTCAGAATGGAGATGTCATCTTGGTAGATTTTTCCTTATTTCCTTCCATATCTaGTGGTTTTCAGTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IWGHRYSEWRCHLGRFFLISFHI*WFSVRW Trigger: CCACCTCACTGAAAACCACAAGATATGGAAGGAAAT...AAGGAAAAATCTACCAAGATGACATCTCCATTCTGAATATCTATGCCCCCAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 72 bp | CAGGACAAAGGCGGCCAGGACGCCGAGCGAGAGGCGTaGCCCGGCGCGGAGCGAGGCCGCCGGCGGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QDKGGQDAEREA*PGAERGRRRLH Trigger: GTGGAGCCGCCGGCGGCCTCGCTCCGCGCCGGGGCACGCCTCTCGCTCGGCGTCCTGGCCGCCTTTGTCCTG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS TCA 72 bp | ATCCCGCGCCCCCGACCAGGCACGACAGCAGAGGCCTaGGCGCGGGCGGCAGAGCCCCGAGGCCGGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: IPRPRPGTTAEA*ARAAEPRGRRR Trigger: CCTTCTCCGGCCTCGGGGCTCTGCCGCCCGCGCTCAGGCCTCTGCTGTCGTGCCTGGTCGGGGGCGCGGGAT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 72 bp | CACACCAGGCCGGCGAAGAGCAGCACCAGGACGCCGTaGCGCAGCCTCACGCGGGGCGCGAGCGTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HTRPAKSSTRTP*RSLTRGASVSS Trigger: GCTGCTGACGCTCGCGCCCCGCGTGAGGCTGCGGCACGGCGTCCTGGTGCTGCTCTTCGCCGGCCTGGTGTG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CAA 72 bp | GCCCCGGCGCGGAGCGAGGCCGCCGGCGGCTCCACGTaGCAGAAGCGGCAGAGGTGGAAGAAGAAGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: APARSEAAGGST*QKRQRWKKKLR Trigger: GCGCAGCTTCTTCTTCCACCTCTGCCGCTTCTGCAACGTGGAGCCGCCGGCGGCCTCGCTCCGCGCCGGGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CAA 90 bp | GAGAGGCGTGCCCCGGCGCGGAGCGAGGCCGCCGGCGGCTCCACGTaGCAGAAGCGGCAGAGGTGGAAGAAGAAGCTGCGCGGAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ERRAPARSEAAGGST*QKRQRWKKKLRGGS Trigger: GGACCCTCCGCGCAGCTTCTTCTTCCACCTCTGCCGCTTCTGCAACGTGGAGCCGCCGGCGGCCTCGCTCCGCGCCGGGGCACGCCTCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS TCA 72 bp | CTCGCCGAGCGCGGCGGAGGGGAGGCTCCCCGGACGTaGAAGAAGTGGTCCAAGCCCAGGGCTAGCAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: LAERGGGEAPRT*KKWSKPRASRH Trigger: ATGCCTGCTAGCCCTGGGCTTGGACCACTTCTTTCACGTCCGGGGAGCCTCCCCTCCGCCGCGCTCGGCGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 72 bp | CCACGTTGCAGAAGCGGCAGAGGTGGAAGAAGAAGCTaGGCGGAGGGTCCTGCCGCAGCGGGCTCACGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PRCRSGRGGRRS*AEGPAAAGSRS Trigger: GCTGCGTGAGCCCGCTGCGGCAGGACCCTCCGCGCAGCTTCTTCTTCCACCTCTGCCGCTTCTGCAACGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 72 bp | CTCCCAGCGACACGCAGCTGGACCTCCTCCGGGGTCTaGTCACAGGCACTTTTTCCTCCGCGGTACTCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LPATRSWTSSGV*SQALFPPRYSP Trigger: CGGCGAGTACCGCGGAGGAAAAAGTGCCTGTGATCAGACCCCGGAGGAGGTCCAGCTGCGTGTCGCTGGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 72 bp | TCTCCTGAACATCTTGCCACTGCCATAGTAACCGGCTaGGCTTTCTCCCAGCGACACGCAGCTGGACCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPEHLATAIVTG*AFSQRHAAGPP Trigger: AGGAGGTCCAGCTGCGTGTCGCTGGGAGAAAGCGCAGCCGGTTACTATGGCAGTGGCAAGATGTTCAGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CCA 72 bp | TGGCTGGGCAAAGCACCAGCTCTTCTCAGACCTGCATaGTGCGTCAGTGACACAGACGATGACCTCTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: WLGKAPALLRPA*CVSDTDDDLCF Trigger: AAAGCAGAGGTCATCGTCTGTGTCACTGACGCACCATGCAGGTCTGAGAAGAGCTGGTGCTTTGCCCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 72 bp | TCTGTTCTCGGGAAATACAAGGCAACGACGGTCTCCTaGACATCTTGCCACTGCCATAGTAACCGGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SVLGKYKATTVS*TSCHCHSNRLR Trigger: GCGCAGCCGGTTACTATGGCAGTGGCAAGATGTTCAGGAGACCGTCGTTGCCTTGTATTTCCCGAGAACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CCA 72 bp | GACACTGGTACATGGCTTGAAGAATTCAGAAGACTGTaGCTGGGCAAAGCACCAGCTCTTCTCAGACCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: DTGTWLEEFRRL*LGKAPALLRPA Trigger: TGCAGGTCTGAGAAGAGCTGGTGCTTTGCCCAGCCACAGTCTTCTGAATTCTTCAAGCCATGTACCAGTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CAA 90 bp | CCTTCTGTCCATCTCAAATGTAGGTCCCGATCTTTTGCTGGGCCATaGATATCTGCTAATTTGATGCACACCTGGCAGACCAAGAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: PSVHLKCRSRSFAGP*ISANLMHTWQTKRR Trigger: TCGCCTCTTGGTCTGCCAGGTGTGCATCAAATTAGCAGATATCAATGGCCCAGCAAAAGATCGGGACCTACATTTGAGATGGACAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CAA 90 bp | ACTTGTGGGGGAAGGCTTGGGTCAATCAGCAGGTCTGACACCATATaGCGAGCTTCATTTAGCACTGAAAGATCAACTCCATTTCCACCT | + |
|
Preference number: 6 (lower is better) Translates to: TCGGRLGSISRSDTI*RASFSTERSTPFPP Trigger: AGGTGGAAATGGAGTTGATCTTTCAGTGCTAAATGAAGCTCGCAATATGGTGTCAGACCTGCTGATTGACCCAAGCCTTCCCCCACAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 72 bp | AAGGCCCATTTAGGTGGCATCCATGACTTGAAACACTaGGTTCTTGGTAAGACCTCTTACCACTGCTGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: KAHLGGIHDLKH*VLGKTSYHCCD Trigger: ATCGCAGCAGTGGTAAGAGGTCTTACCAAGAACTCAGTGTTTCAAGTCATGGATGCCACCTAAATGGGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 72 bp | CTGCTACACAGATTGCTGTCAGAGTTCCTAAGGTACTaGTGGAAATCTGCTGCACTTGATACACTGCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: LLHRLLSEFLRY*WKSAALDTLPS Trigger: ACTGGGCAGTGTATCAAGTGCAGCAGATTTCCATCAGTACCTTAGGAACTCTGACAGCAATCTGTGTAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CCA 72 bp | GATCGATTAGTTAGAGAGCCAGCAGACACTGGTACATaGCTTGAAGAATTCAGAAGACTGTGGCTGGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: DRLVREPADTGT*LEEFRRLWLGK Trigger: TTTGCCCAGCCACAGTCTTCTGAATTCTTCAAGCCATGTACCAGTGTCTGCTGGCTCTCTAACTAATCGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS CAA 72 bp | CATCTCAAATGTAGGTCCCGATCTTTTGCTGGGCCATaGATATCTGCTAATTTGATGCACACCTGGCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: HLKCRSRSFAGP*ISANLMHTWQT Trigger: GGTCTGCCAGGTGTGCATCAAATTAGCAGATATCAATGGCCCAGCAAAAGATCGGGACCTACATTTGAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 72 bp | GGAGTTGGGAAACTGGTTCTGCCACTCAATCCCTTGTaGAGTTTTCGATCTCCTTTCTCAACTGGATCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GVGKLVLPLNPL*SFRSPFSTGSS Trigger: AGAAGATCCAGTTGAGAAAGGAGATCGAAAACTTCACAAGGGATTGAGTGGCAGAACCAGTTTCCCAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 72 bp | TGCACACCTGGCAGACCAAGAGGCGATCGTTTTCACTaGTCCATTCTATACCGTTACTATTTACATCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: CTPGRPRGDRFH*SILYRYYLHHW Trigger: CCAATGATGTAAATAGTAACGGTATAGAATGGAGCAGTGAAAACGATCGCCTCTTGGTCTGCCAGGTGTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 72 bp | TGGTGTAAAAGAATTAATCTTTGGCCTACAGGAACCTaGGAAAGCACCCATCAAGCTACTGATACTCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WCKRINLWPTGT*ESTHQATDTPQ Trigger: CTGCGGAGTATCAGTAGCTTGATGGGTGCTTTCTCAGGTTCCTGTAGGCCAAAGATTAATTCTTTTACACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS TCA 72 bp | GGTCTGTACCATCGGGTTCACATGTTGAAACATATTTaGGTATTTGGTGTCCACAGCTGCTACACAGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLYHRVHMLKHI*VFGVHSCYTDC Trigger: GCAATCTGTGTAGCAGCTGTGGACACCAAATACTCAAATATGTTTCAACATGTGAACCCGATGGTACAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
||
| CDS GCA 72 bp | CCTGCATGGTGCGTCAGTGACACAGACGATGACCTCTaGTTTGGAATTGTAAAAAGATTTGAACTAAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PAWCVSDTDDDL*FGIVKRFELKG Trigger: GCCTTTTAGTTCAAATCTTTTTACAATTCCAAAGCAGAGGTCATCGTCTGTGTCACTGACGCACCATGCAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS GCA 72 bp | ATTTCCTTCCATATCTTGTGGTTTTCAGTGAGGTGGTaGATTAGTTGGCAAAATATTCGCCGCCTGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: ISFHILWFSVRW*ISWQNIRRLPF Trigger: GAAAGGCAGGCGGCGAATATTTTGCCAACTAATGCACCACCTCACTGAAAACCACAAGATATGGAAGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS CCA 72 bp | ACACTGCTGTCTTCTTCACCTGATTTTTCACTGGGGTaGTCTGTACCATCGGGTTCACATGTTGAAACATAT | + |
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Preference number: 6 (lower is better) Translates to: TLLSSSPDFSLG*SVPSGSHVETY Trigger: ATATGTTTCAACATGTGAACCCGATGGTACAGACCACCCCAGTGAAAAATCAGGTGAAGAAGACAGCAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS CCA 72 bp | CATATCTTGTGGTTTTCAGTGAGGTGGTGCATTAGTTaGCAAAATATTCGCCGCCTGCCTTTCCTTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: HILWFSVRWCIS*QNIRRLPFLLC Trigger: ACAAAGAAGGAAAGGCAGGCGGCGAATATTTTGCCAACTAATGCACCACCTCACTGAAAACCACAAGATATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS CAA 90 bp | TGGCAGCTGCCACATACAAAGCCATCAATTCTAATGCAGGGATGTTaGAAGATAGGCAGCCATAACTCATATCTGGAATACAGCAACTCT | + |
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Preference number: 6 (lower is better) Translates to: WQLPHTKPSILMQGC*KIGSHNSYLEYSNS Trigger: AGAGTTGCTGTATTCCAGATATGAGTTATGGCTGCCTATCTTCAAACATCCCTGCATTAGAATTGATGGCTTTGTATGTGGCAGCTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS CCA 72 bp | CACCTTCCAAAAATAACTCCCTGCAGGCTTTCTTCATaGTCTCTTCTTCTTGGGTTTCCACAATGTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: HLPKITPCRLSS*SLLLGFPQCSM Trigger: CATTGAACATTGTGGAAACCCAAGAAGAAGAGACCATGAAGAAAGCCTGCAGGGAGTTATTTTTGGAAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS CAA 90 bp | AATCTTCTACTAACATTGGATCCAGTGACACTTCCTGATCGATATTaGGTTGCTGTGCCTCTTCCATCAGGTGACTATCACCTTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: NLLLTLDPVTLPDRY*VAVPLPSGDYHLPK Trigger: TTTTGGAAGGTGATAGTCACCTGATGGAAGAGGCACAGCAACCAAATATCGATCAGGAAGTGTCACTGGATCCAATGTTAGTAGAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS CCA 72 bp | AACTCCCTGCAGGCTTTCTTCATGGTCTCTTCTTCTTaGGTTTCCACAATGTTCAATGGTTCTTTTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: NSLQAFFMVSSS*VSTMFNGSFEK Trigger: TTTCTCAAAAGAACCATTGAACATTGTGGAAACCCAAGAAGAAGAGACCATGAAGAAAGCCTGCAGGGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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| CDS CAA 72 bp | CCACATACAAAGCCATCAATTCTAATGCAGGGATGTTaGAAGATAGGCAGCCATAACTCATATCTGGAATAC | + |
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Preference number: 6 (lower is better) Translates to: PHTKPSILMQGC*KIGSHNSYLEY Trigger: GTATTCCAGATATGAGTTATGGCTGCCTATCTTCAAACATCCCTGCATTAGAATTGATGGCTTTGTATGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032909.9 |
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