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Pregenerated sensors for PDE3A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000041741

Ensembl transcript IDs: ENSMUST00000043259.10

Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGACCAGAAAGCCTTAGTCTTCTGAGTGTGAGGCTGGTGGTAGAGTaGCCCCAAGTGGCAGGTAGCAGTGGTACCAATCATATGACCCAG +
Preference number: 1 (lower is better)
Translates to: RPESLSLLSVRLVVE*PQVAGSSGTNHMTQ
Trigger: CTGGGTCATATGATTGGTACCACTGCTACCTGCCACTTGGGGGCACTCTACCACCAGCCTCACACTCAGAAGACTAAGGCTTTCTGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 90 bp CTAAGAAGCCTCTCTTTATGCTTCCAAGACCCTAAGGAAGATCAATaGAGGTGCCCGCCTCAAGGAGGCACCAAGAGTGTGTCCTCAAGC +
Preference number: 1 (lower is better)
Translates to: LRSLSLCFQDPKEDQ*RCPPQGGTKSVSSS
Trigger: GCTTGAGGACACACTCTTGGTGCCTCCTTGAGGCGGGCACCTCCATTGATCTTCCTTAGGGTCTTGGAAGCATAAAGAGAGGCTTCTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 90 bp CCATGGACCAGGCTGCAAAACCATGCTATGCTTTCACACAGTGTATaGAAGACCACAACAGGGAGGTCAGAGCTAACAATCTTCAACAGT +
Preference number: 1 (lower is better)
Translates to: PWTRLQNHAMLSHSV*KTTTGRSELTIFNS
Trigger: ACTGTTGAAGATTGTTAGCTCTGACCTCCCTGTTGTGGTCTTCCATACACTGTGTGAAAGCATAGCATGGTTTTGCAGCCTGGTCCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 90 bp AGAGGACACAGGGAAATTGCAAATATCTACAGCTACCAAAGAGTCTaGAGGGCATTCATTCACTTCCTTCTCCTCAGCTTTCCTGGGACT +
Preference number: 1 (lower is better)
Translates to: RGHREIANIYSYQRV*RAFIHFLLLSFPGT
Trigger: AGTCCCAGGAAAGCTGAGGAGAAGGAAGTGAATGAATGCCCTGCAGACTCTTTGGTAGCTGTAGATATTTGCAATTTCCCTGTGTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 90 bp GTAATCTACAGTGTTGTGTCTAAGTGTGCTGGCTTAGAAAATGTCTaGGACGAGTCATTCTGTCTGCAAACACAGCTCGCTCTACCCATG +
Preference number: 1 (lower is better)
Translates to: VIYSVVSKCAGLENV*DESFCLQTQLALPM
Trigger: CATGGGTAGAGCGAGCTGTGTTTGCAGACAGAATGACTCGTCTCAGACATTTTCTAAGCCAGCACACTTAGACACAACACTGTAGATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 90 bp GGAGAACAAAAGGTGCTCAGTCTGGAGCCTGTTTCCTCTCTAAGCTaGACAGTTCCTCATGAGTTCTTGTCCTTTATGACTTTCTATGTC +
Preference number: 1 (lower is better)
Translates to: GEQKVLSLEPVSSLS*TVPHEFLSFMTFYV
Trigger: GACATAGAAAGTCATAAAGGACAAGAACTCATGAGGAACTGTGCAGCTTAGAGAGGAAACAGGCTCCAGACTGAGCACCTTTTGTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 90 bp ATTCAGAATCTGCTAACTGCCGAAGCCCTGGCACTATCTCAGAAATaGATAGAAACACATTCTAATTGTCTGGGTGAGGCCCGAATCCTT +
Preference number: 1 (lower is better)
Translates to: IQNLLTAEALALSQK*IETHSNCLGEARIL
Trigger: AAGGATTCGGGCCTCACCCAGACAATTAGAATGTGTTTCTATGCATTTCTGAGATAGTGCCAGGGCTTCGGCAGTTAGCAGATTCTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 90 bp CTGTCTCTCTCTCTCTCTCTCTCACACACACACAACACACACAGTTaGCAGTATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACC +
Preference number: 1 (lower is better)
Translates to: LSLSLSLSHTHNTHS*QYALEFQPCSEMLT
Trigger: GGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATACTGCCAACTGTGTGTGTTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 90 bp TACGCTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTaGGTTTCCACCCTTCCATTCAGTTTGTTGCCTTTTGGGTTGAGA +
Preference number: 1 (lower is better)
Translates to: YASRIIRWLFRSHTW*VSTLPFSLLPFGLR
Trigger: TCTCAACCCAAAAGGCAACAAACTGAATGGAAGGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAGCGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 90 bp GCTTTGATGATTAAAGAGCCGCTTCTTAATGCAAACCAACGAGTCTaGGTTACACACGGCCCCAGTGAACATTTATCTATTAGAGGAAGG +
Preference number: 1 (lower is better)
Translates to: ALMIKEPLLNANQRV*VTHGPSEHLSIRGR
Trigger: CCTTCCTCTAATAGATAAATGTTCACTGGGGCCGTGTGTAACCCAGACTCGTTGGTTTGCATTAAGAAGCGGCTCTTTAATCATCAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 90 bp TGTACTTTAAAACAAGAAAATCTAGGCAGTTTGCTGAGATCCTCATaGTGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTC +
Preference number: 1 (lower is better)
Translates to: CTLKQENLGSLLRSS*CNQPDSYSDSAALF
Trigger: GAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATCATGAGGATCTCAGCAAACTGCCTAGATTTTCTTGTTTTAAAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 90 bp TGTCAGATCCCCTGGAACTGGTGTTACAGGCTACGTGAGCTGCCCTaGGGACACTTAAATTCTTCATGTACTTTATTAAATGTACACTTA +
Preference number: 1 (lower is better)
Translates to: CQIPWNWCYRLRELP*GHLNSSCTLLNVHL
Trigger: TAAGTGTACATTTAATAAAGTACATGAAGAATTTAAGTGTCCTCAGGGCAGCTCACGTAGCCTGTAACACCAGTTCCAGGGGATCTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 90 bp CTAGGAATAACTAAAGTCAAAGTCATAAACATCTCCCTTTTCTCATaGACACATGTACAAGACCAACCCCTCTGTCTGTCTGTCTGTCTC +
Preference number: 1 (lower is better)
Translates to: LGITKVKVINISLFS*THVQDQPLCLSVCL
Trigger: GAGACAGACAGACAGACAGAGGGGTTGGTCTTGTACATGTGTGCATGAGAAAAGGGAGATGTTTATGACTTTGACTTTAGTTATTCCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 90 bp TCATTCAAAGACACTGCAGAAAGGATTTCCCTCTGTGTGTTCACATaGACTTCATCACCTGCTACAGCTATTCTAGGAATAACTAAAGTC +
Preference number: 1 (lower is better)
Translates to: SFKDTAERISLCVFT*TSSPATAILGITKV
Trigger: GACTTTAGTTATTCCTAGAATAGCTGTAGCAGGTGATGAAGTCCATGTGAACACACAGAGGGAAATCCTTTCTGCAGTGTCTTTGAATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTAGGCTGGTGGTAGAGTaGCCCCAAGTGGCAGGTAGC +
Preference number: 2 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIRLVVE*PQVAGS
Trigger: GCTACCTGCCACTTGGGGGCACTCTACCACCAGCCT...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGTATCTTTTCCCTAAGTaGGTAGAGACCCCTCCACTG +
Preference number: 2 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSYLFPK*VETPPL
Trigger: CAGTGGAGGGGTCTCTACCCACTTAGGGAAAAGATA...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCCCTAAGGAAGATCAATaGAGGTGCCCGCCTCAAGGA +
Preference number: 2 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSPKEDQ*RCPPQG
Trigger: TCCTTGAGGCGGGCACCTCCATTGATCTTCCTTAGG...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCATTCCAACCATGTTCTaGAATGCTCACCCCTCGGCA +
Preference number: 2 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSIPTMF*NAHPSA
Trigger: TGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAAT...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCTTTCAAAAAGGGGCATaGCCATGGACCAGGCTGCAA +
Preference number: 2 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPFQKGA*PWTRLQ
Trigger: TTGCAGCCTGGTCCATGGTCATGCCCCTTTTTGAAA...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGATCAATCTGCCTGGATaGATGAGCACAATTCTAGAA +
Preference number: 2 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSINLPG*MSTILE
Trigger: TTCTAGAATTGTGCTCATTCATCCAGGCAGATTGAT...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGGAGGATGAATTAACATaGCATAAATTTGGGGTCCAG +
Preference number: 2 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSEDELT*HKFGVQ
Trigger: CTGGACCCCAAATTTATGTCATGTTAATTCATCCTC...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 90 bp ATGGAAGACCACAACAGGGAGGTCAGAGCTAACAATCTTCAACAGTaGCCAAGGAGTAGTTTTCCCCAGGCCAACTTCCAAACCCTAAGT +
Preference number: 2 (lower is better)
Translates to: MEDHNREVRANNLQQ*PRSSFPQANFQTLS
Trigger: ACTTAGGGTTTGGAAGTTGGCCTGGGGAAAACTACTCCTTGGCAACTGTTGAAGATTGTTAGCTCTGACCTCCCTGTTGTGGTCTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAAACGAGTCATTCTGTCTaGAAACACAGCTCGCTCTAC +
Preference number: 2 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQTSHSV*KHSSLY
Trigger: GTAGAGCGAGCTGTGTTTGCAGACAGAATGACTCGT...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCCACATTCTAATTGTCTaGGTGAGGCCCGAATCCTTC +
Preference number: 2 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSHILIV*VRPESF
Trigger: GAAGGATTCGGGCCTCACCCAGACAATTAGAATGTG...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTAGGTCACACACTTGGTaGGTTTCCACCCTTCCATTC +
Preference number: 2 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIRSHTW*VSTLPF
Trigger: GAATGGAAGGGTGGAAACCCACCAAGTGTGTGACCT...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCAAGGGAGGCATCCAATaGGATTCAGGATTAGAGAGA +
Preference number: 2 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSKGGIQ*DSGLER
Trigger: TCTCTCTAATCCTGAATCTCATTGGATGCCTCCCTT...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCCAGGCTGCAAAACCATaGTATGCTTTCACACAGTGT +
Preference number: 2 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPQAAKP*YAFTQC
Trigger: ACACTGTGTGAAAGCATAGCATGGTTTTGCAGCCTG...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTCTCCTACTCAGACTCTaGAGCTTTGTTCAGACTTCC +
Preference number: 2 (lower is better)
Translates to: TCRTHLGFYSTESSWFPILLLRL*SFVQTS
Trigger: GGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAG...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAACTCTGTGTGTTCACATaGACTTCATCACCTGCTACA +
Preference number: 2 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQLCVFT*TSSPAT
Trigger: TGTAGCAGGTGATGAAGTCCATGTGAACACACAGAG...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTCCCTCTAGCTCCTCTTaGGTATCCACCAGTAAAGAA +
Preference number: 2 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIPSSSS*VSTSKE
Trigger: TTCTTTACTGGTGGATACCCAAGAGGAGCTAGAGGG...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGCAAAATGCAAGAGAATaGTGGGTGATTCAAGAATTT +
Preference number: 2 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSQNARE*WVIQEF
Trigger: AAATTCTTGAATCACCCACCATTCTCTTGCATTTTG...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp TATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACCCCTCGGCAGGGAGAACTGCACAGTTCCTCATaGGTTCTTGTCCTTTATGAC +
Preference number: 2 (lower is better)
Translates to: YALEFQPCSEMLTPRQGELHSSS*VLVLYD
Trigger: GTCATAAAGGACAAGAACTCATGAGGAACTGTGCAG...TTCTCCCTGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 90 bp TCAAGAAAGTTCTCTGGGAAAGAAAGGCCAGAGGACACAGGGAAATaGCAAATATCTACAGCTACCAAAGAGTCTGCAGGGCATTCATTC +
Preference number: 2 (lower is better)
Translates to: SRKFSGKERPEDTGK*QISTATKESAGHSF
Trigger: GAATGAATGCCCTGCAGACTCTTTGGTAGCTGTAGATATTTGCAATTTCCCTGTGTCCTCTGGCCTTTCTTTCCCAGAGAACTTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCATCTCCCTTTTCTCATaGACACATGTACAAGACCAA +
Preference number: 2 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPISLFS*THVQDQ
Trigger: TTGGTCTTGTACATGTGTGCATGAGAAAAGGGAGAT...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCTTCATTCAAAGACACTaGAGAAAGGATTTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPFIQRH*RKDFPL
Trigger: CAGAGGGAAATCCTTTCTGCAGTGTCTTTGAATGAA...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTACAAGACTTTTCCAGTaGCCTGTTAGAACTCTTACC +
Preference number: 2 (lower is better)
Translates to: TCRTHLGFYSTESSWFPITRLFQ*PVRTLT
Trigger: GGTAAGAGTTCTAACAGGGCACTGGAAAAGTCTTGT...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCCCTAAGTTGACATTTTaGCTTCATCCCTTTGTCTCA +
Preference number: 2 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPPKLTF*LHPFVS
Trigger: TGAGACAAAGGGATGAAGGCAAAATGTCAACTTAGG...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACATGCCTCCCTGTGCACTaGGGTAACTCGGAGGAACTT +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTCLPVH*GNSEEL
Trigger: AAGTTCCTCCGAGTTACCCCAGTGCACAGGGAGGCA...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 90 bp CTGGAGCCTGTTTCCTCTCTAAGCTGCACAGTTCCTCATGAGTTCTaGTCCTTTATGACTTTCTATGTCACAGTGACCTCTACATATCTT +
Preference number: 2 (lower is better)
Translates to: LEPVSSLSCTVPHEF*SFMTFYVTVTSTYL
Trigger: AAGATATGTAGAGGTCACTGTGACATAGAAAGTCATAAAGGACAAGAACTCATGAGGAACTGTGCAGCTTAGAGAGGAAACAGGCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAAGGCAGGTGGATTTCTaGGTTCGAGGCCAACTTGGT +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTRQVDF*VRGQLG
Trigger: ACCAAGTTGGCCTCGAACTCAGAAATCCACCTGCCT...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 90 bp AAGTCACATCAAACACATTGGCACCACAGGAAGTTAACTCTGAAGTaGGAGGTGAATACAGTAATATTGCTGTCACCAAGAAGGTGGACA +
Preference number: 2 (lower is better)
Translates to: KSHQTHWHHRKLTLK*EVNTVILLSPRRWT
Trigger: TGTCCACCTTCTTGGTGACAGCAATATTACTGTATTCACCTCCAACTTCAGAGTTAACTTCCTGTGGTGCCAATGTGTTTGATGTGACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 90 bp GTCCTCAAGCAGAACAGACAGAAATTCCAGATTCTTCTTTTCCTATaGGCCAGGAGTTGTTCACCACACAAACACTCCACTTCTATAAAG +
Preference number: 2 (lower is better)
Translates to: VLKQNRQKFQILLFL*ARSCSPHKHSTSIK
Trigger: CTTTATAGAAGTGGAGTGTTTGTGTGGTGAACAACTCCTGGCCAATAGGAAAAGAAGAATCTGGAATTTCTGTCTGTTCTGCTTGAGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTCCTAACTACTGTGCTTaGAGAAAGCTACAATGTATA +
Preference number: 2 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIPNYCA*RKLQCI
Trigger: TATACATTGTAGCTTTCTCCAAGCACAGTAGTTAGG...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 90 bp GTGCTCTGTCTATCATTCCTATTGCAGGGCAAGAGTTACATTTATTaGCCTTCACTGAAGAAGGATTCTTGCTTCGGAGTAGATTTACCA +
Preference number: 2 (lower is better)
Translates to: VLCLSFLLQGKSYIY*PSLKKDSCFGVDLP
Trigger: TGGTAAATCTACTCCGAAGCAAGAATCCTTCTTCAGTGAAGGCAAATAAATGTAACTCTTGCCCTGCAATAGGAATGATAGACAGAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACATCTACCCTACTGTTATaGCAGATGAACACAGTGGGG +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTSTLLL*QMNTVG
Trigger: CCCCACTGTGTTCATCTGTCATAACAGTAGGGTAGA...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACACCCTATCCCCCAAAATaGAAGAGAATGGTGGGTGAT +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTPYPPK*KRMVGD
Trigger: ATCACCCACCATTCTCTTGCATTTTGGGGGATAGGG...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTTTACATGAGCCTATGTaGGAATTTATACACACACAT +
Preference number: 2 (lower is better)
Translates to: TCRTHLGFYSTESSWFPILHEPM*EFIHTH
Trigger: ATGTGTGTGTATAAATTCCCACATAGGCTCATGTAA...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 90 bp CACCACAGGAAGTTAACTCTGAAGTTGGAGGTGAATACAGTAATATaGCTGTCACCAAGAAGGTGGACAACATCATTCATGGAAAATACT +
Preference number: 2 (lower is better)
Translates to: HHRKLTLKLEVNTVI*LSPRRWTTSFMENT
Trigger: AGTATTTTCCATGAATGATGTTGTCCACCTTCTTGGTGACAGCAATATTACTGTATTCACCTCCAACTTCAGAGTTAACTTCCTGTGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 90 bp GAACTCTGTTGCAGTAGCCTTCAGACAATTGTAAAGGCAATTAAATaGCTAATGACACAAAAACCAAGGGAGGCATCCAATGAGATTCAG +
Preference number: 2 (lower is better)
Translates to: ELCCSSLQTIVKAIK*LMTQKPREASNEIQ
Trigger: CTGAATCTCATTGGATGCCTCCCTTGGTTTTTGTGTCATTAGCAATTTAATTGCCTTTACAATTGTCTGAAGGCTACTGCAACAGAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 90 bp GAACAGACAGAAATTCCAGATTCTTCTTTTCCTATTGGCCAGGAGTaGTTCACCACACAAACACTCCACTTCTATAAAGAAGTCATTTCA +
Preference number: 2 (lower is better)
Translates to: EQTEIPDSSFPIGQE*FTTQTLHFYKEVIS
Trigger: TGAAATGACTTCTTTATAGAAGTGGAGTGTTTGTGTGGTGAACAACTCCTGGCCAATAGGAAAAGAAGAATCTGGAATTTCTGTCTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACATTCCAAACCCTAAGTTaGCATTTTGCCTTCATCCCT +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTFQTLS*HFAFIP
Trigger: AGGGATGAAGGCAAAATGTCAACTTAGGGTTTGGAA...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR GCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACACGGAGGAACTTAGATTaGAATTTGGGCACTTGCATT +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTRRNLD*NLGTCI
Trigger: AATGCAAGTGCCCAAATTGCAATCTAAGTTCCTCCG...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACACACAACACACACAGTTaGCAGTATGCATTAGAATTC +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTHNTHS*QYALEF
Trigger: GAATTCTAATGCATACTGCCAACTGTGTGTGTTGTG...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACACCTGAGTTTATCAAATaGCACCTGTATAGGCTCATA +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTPEFIK*HLYRLI
Trigger: TATGAGCCTATACAGGTGCCATTTGATAAACTCAGG...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR TCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAGATGATGCAAGAAAATaGCTTCAGTTTCAAAGCACA +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTDDARK*LQFQST
Trigger: TGTGCTTTGAAACTGAAGTCATTTTCTTGCATCATC...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACATTATGGTTCCCTCATTaGAGGCATAAAAATACTCAC +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTLWFPH*RHKNTH
Trigger: GTGAGTATTTTTATGCCTCCAATGAGGGAACCATAA...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACATTTATTTTATGCAGATaGGTGTTTTGCCTGAAGAGA +
Preference number: 2 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTFILCR*VFCLKR
Trigger: TCTCTTCAGGCAAAACACCCATCTGCATAAAATAAA...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGAATGTTGAAAATACCATaGATAACATGCAGAACACAC +
Preference number: 2 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRMLKIP*ITCRTH
Trigger: GTGTGTTCTGCATGTTATCCATGGTATTTTCAACAT...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 72 bp AGCCTTAGTCTTCTGAGTGTGAGGCTGGTGGTAGAGTaGCCCCAAGTGGCAGGTAGCAGTGGTACCAATCAT +
Preference number: 3 (lower is better)
Translates to: SLSLLSVRLVVE*PQVAGSSGTNH
Trigger: ATGATTGGTACCACTGCTACCTGCCACTTGGGGGCACTCTACCACCAGCCTCACACTCAGAAGACTAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp ATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTaGGTTCGAGGCCAACTTGGTCTACAAAATGAGTTC +
Preference number: 3 (lower is better)
Translates to: IPALGRQRQVDF*VRGQLGLQNEF
Trigger: GAACTCATTTTGTAGACCAAGTTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 72 bp TTATGCTTCCAAGACCCTAAGGAAGATCAATGGAGGTaGCCGCCTCAAGGAGGCACCAAGAGTGTGTCCTCA +
Preference number: 3 (lower is better)
Translates to: LCFQDPKEDQWR*PPQGGTKSVSS
Trigger: TGAGGACACACTCTTGGTGCCTCCTTGAGGCGGGCACCTCCATTGATCTTCCTTAGGGTCTTGGAAGCATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp CTCTCTTTATGCTTCCAAGACCCTAAGGAAGATCAATaGAGGTGCCCGCCTCAAGGAGGCACCAAGAGTGTG +
Preference number: 3 (lower is better)
Translates to: LSLCFQDPKEDQ*RCPPQGGTKSV
Trigger: CACACTCTTGGTGCCTCCTTGAGGCGGGCACCTCCATTGATCTTCCTTAGGGTCTTGGAAGCATAAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGGAGGACACAGGGAAATaGCAAATATCTACAGCTACC +
Preference number: 3 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSEDTGK*QISTAT
Trigger: GGTAGCTGTAGATATTTGCAATTTCCCTGTGTCCTC...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp GTGTCAGATCCCCTGGAACTGGTGTTACAGGCTACGTaGGCTGCCCTGAGGACACTTAAATTCTTCATGTAC +
Preference number: 3 (lower is better)
Translates to: VSDPLELVLQAT*AALRTLKFFMY
Trigger: GTACATGAAGAATTTAAGTGTCCTCAGGGCAGCTCACGTAGCCTGTAACACCAGTTCCAGGGGATCTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 72 bp ACGGCCCCAGTGAACATTTATCTATTAGAGGAAGGGTaGTTTTCCCTCTGTGTTCCACACCAGTTTGAGGGG +
Preference number: 3 (lower is better)
Translates to: TAPVNIYLLEEG*FSLCVPHQFEG
Trigger: CCCCTCAAACTGGTGTGGAACACAGAGGGAAAAGCACCCTTCCTCTAATAGATAAATGTTCACTGGGGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp TACCACACATATGCAGTGTCCAAGGAGGTCAGAAGATaGTGTCAGATCCCCTGGAACTGGTGTTACAGGCTA +
Preference number: 3 (lower is better)
Translates to: YHTYAVSKEVRR*CQIPWNWCYRL
Trigger: TAGCCTGTAACACCAGTTCCAGGGGATCTGACACCATCTTCTGACCTCCTTGGACACTGCATATGTGTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp TACAAGGCCATTTCACTCCAGAGCAAACAACTGAGCTaGTTTGTGAGAAGGCTCGACAGGTGTGCATCAGAG +
Preference number: 3 (lower is better)
Translates to: YKAISLQSKQLS*FVRRLDRCASE
Trigger: CTCTGATGCACACCTGTCGAGCCTTCTCACAAACCAGCTCAGTTGTTTGCTCTGGAGTGAAATGGCCTTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp TATGCACAGGTCTCAGAGGCTATGACTAGGAGTCTGTaGACACAGCACTGGACCAGAATCTACAAGCAACAG +
Preference number: 3 (lower is better)
Translates to: YAQVSEAMTRSL*TQHWTRIYKQQ
Trigger: CTGTTGCTTGTAGATTCTGGTCCAGTGCTGTGTTCACAGACTCCTAGTCATAGCCTCTGAGACCTGTGCATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 72 bp CTGCTAACTGCCGAAGCCCTGGCACTATCTCAGAAATaGATAGAAACACATTCTAATTGTCTGGGTGAGGCC +
Preference number: 3 (lower is better)
Translates to: LLTAEALALSQK*IETHSNCLGEA
Trigger: GGCCTCACCCAGACAATTAGAATGTGTTTCTATGCATTTCTGAGATAGTGCCAGGGCTTCGGCAGTTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGCCACCAACTACATTTTaGCATCTGCAGACATATTTA +
Preference number: 3 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSPPTTF*HLQTYL
Trigger: TAAATATGTCTGCAGATGCAAAAATGTAGTTGGTGG...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCCTTCCAAACCCTAAGTaGACATTTTGCCTTCATCCC +
Preference number: 3 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPLPNPK*TFCLHP
Trigger: GGGATGAAGGCAAAATGTCAACTTAGGGTTTGGAAG...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCACCCTTCCATTCAGTTaGTTGCCTTTTGGGTTGAGA +
Preference number: 3 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSTLPFS*LPFGLR
Trigger: TCTCAACCCAAAAGGCAACAAACTGAATGGAAGGGT...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 72 bp ACAACAGGGAGGTCAGAGCTAACAATCTTCAACAGTTaGCAAGGAGTAGTTTTCCCCAGGCCAACTTCCAAA +
Preference number: 3 (lower is better)
Translates to: TTGRSELTIFNS*QGVVFPRPTSK
Trigger: TTTGGAAGTTGGCCTGGGGAAAACTACTCCTTGGCAACTGTTGAAGATTGTTAGCTCTGACCTCCCTGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp AGGCTGCAAAACCATGCTATGCTTTCACACAGTGTATaGAAGACCACAACAGGGAGGTCAGAGCTAACAATC +
Preference number: 3 (lower is better)
Translates to: RLQNHAMLSHSV*KTTTGRSELTI
Trigger: GATTGTTAGCTCTGACCTCCCTGTTGTGGTCTTCCATACACTGTGTGAAAGCATAGCATGGTTTTGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp AGTGTTGTGTCTAAGTGTGCTGGCTTAGAAAATGTCTaGGACGAGTCATTCTGTCTGCAAACACAGCTCGCT +
Preference number: 3 (lower is better)
Translates to: SVVSKCAGLENV*DESFCLQTQLA
Trigger: AGCGAGCTGTGTTTGCAGACAGAATGACTCGTCTCAGACATTTTCTAAGCCAGCACACTTAGACACAACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 72 bp ATGTATTGTGATAAATCTCTGGATGGTGCCTCCCTGTaGACTGGGGTAACTCGGAGGAACTTAGATTGCAAT +
Preference number: 3 (lower is better)
Translates to: MYCDKSLDGASL*TGVTRRNLDCN
Trigger: ATTGCAATCTAAGTTCCTCCGAGTTACCCCAGTGCACAGGGAGGCACCATCCAGAGATTTATCACAATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAATGTCTATCATTCCTATaGCAGGGCAAGAGTTACATT +
Preference number: 3 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQCLSFL*QGKSYI
Trigger: AATGTAACTCTTGCCCTGCAATAGGAATGATAGACA...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCTTGTTGCCTTTTGGGTaGAGAACAACAACAACTTGT +
Preference number: 3 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPLLPFG*RTTTTC
Trigger: ACAAGTTGTTGTTGTTCTCAACCCAAAAGGCAACAA...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp GGAGCCTGTTTCCTCTCTAAGCTGCACAGTTCCTCATaGGTTCTTGTCCTTTATGACTTTCTATGTCACAGT +
Preference number: 3 (lower is better)
Translates to: GACFLSKLHSSS*VLVLYDFLCHS
Trigger: ACTGTGACATAGAAAGTCATAAAGGACAAGAACTCATGAGGAACTGTGCAGCTTAGAGAGGAAACAGGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp AAACAAGAAAATCTAGGCAGTTTGCTGAGATCCTCATaGTGTAACCAGCCTGACTCCTACTCAGACTCTGCA +
Preference number: 3 (lower is better)
Translates to: KQENLGSLLRSS*CNQPDSYSDSA
Trigger: TGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATCATGAGGATCTCAGCAAACTGCCTAGATTTTCTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp GACACTGCAGAAAGGATTTCCCTCTGTGTGTTCACATaGACTTCATCACCTGCTACAGCTATTCTAGGAATA +
Preference number: 3 (lower is better)
Translates to: DTAERISLCVFT*TSSPATAILGI
Trigger: TATTCCTAGAATAGCTGTAGCAGGTGATGAAGTCCATGTGAACACACAGAGGGAAATCCTTTCTGCAGTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp CTGTATCAGATCATGAATCAAATTAGAGTAGGCAGATaGCTGGTGGCTCTCAAACTCCACAATAAACCCGCA +
Preference number: 3 (lower is better)
Translates to: LYQIMNQIRVGR*LVALKLHNKPA
Trigger: TGCGGGTTTATTGTGGAGTTTGAGAGCCACCAGCCATCTGCCTACTCTAATTTGATTCATGATCTGATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTACACAACACACACAGTaGGCAGTATGCATTAGAATT +
Preference number: 3 (lower is better)
Translates to: TCRTHLGFYSTESSWFPITQHTQ*AVCIRI
Trigger: AATTCTAATGCATACTGCCAACTGTGTGTGTTGTGT...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp ATTGCTAATGACACAAAAACCAAGGGAGGCATCCAATaGGATTCAGGATTAGAGAGAAGGCTAAGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: IANDTKTKGGIQ*DSGLERRLRSL
Trigger: GAGGCTTCTTAGCCTTCTCTCTAATCCTGAATCTCATTGGATGCCTCCCTTGGTTTTTGTGTCATTAGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp CCCTGGAACTGGTGTTACAGGCTACGTGAGCTGCCCTaGGGACACTTAAATTCTTCATGTACTTTATTAAAT +
Preference number: 3 (lower is better)
Translates to: PWNWCYRLRELP*GHLNSSCTLLN
Trigger: ATTTAATAAAGTACATGAAGAATTTAAGTGTCCTCAGGGCAGCTCACGTAGCCTGTAACACCAGTTCCAGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp TCTCTCTCTCTCTCACACACACACAACACACACAGTTaGCAGTATGCATTAGAATTCCAACCATGTTCTGAA +
Preference number: 3 (lower is better)
Translates to: SLSLSHTHNTHS*QYALEFQPCSE
Trigger: TTCAGAACATGGTTGGAATTCTAATGCATACTGCCAACTGTGTGTGTTGTGTGTGTGTGAGAGAGAGAGAGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp ATTAAAGAGCCGCTTCTTAATGCAAACCAACGAGTCTaGGTTACACACGGCCCCAGTGAACATTTATCTATT +
Preference number: 3 (lower is better)
Translates to: IKEPLLNANQRV*VTHGPSEHLSI
Trigger: AATAGATAAATGTTCACTGGGGCCGTGTGTAACCCAGACTCGTTGGTTTGCATTAAGAAGCGGCTCTTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTGTTCCTCATGAGTTCTaGTCCTTTATGACTTTCTAT +
Preference number: 3 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIVPHEF*SFMTFY
Trigger: ATAGAAAGTCATAAAGGACAAGAACTCATGAGGAAC...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTCCTACGGTGAGTTTGTaGACTTTCTTCTTTATTACA +
Preference number: 3 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIPTVSL*TFFFIT
Trigger: TGTAATAAAGAAGAAAGTCAACAAACTCACCGTAGG...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 72 bp ACTAAAGTCAAAGTCATAAACATCTCCCTTTTCTCATaGACACATGTACAAGACCAACCCCTCTGTCTGTCT +
Preference number: 3 (lower is better)
Translates to: TKVKVINISLFS*THVQDQPLCLS
Trigger: AGACAGACAGAGGGGTTGGTCTTGTACATGTGTGCATGAGAAAAGGGAGATGTTTATGACTTTGACTTTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp AGAACAGACAGAAATTCCAGATTCTTCTTTTCCTATTaGCCAGGAGTTGTTCACCACACAAACACTCCACTT +
Preference number: 3 (lower is better)
Translates to: RTDRNSRFFFSY*PGVVHHTNTPL
Trigger: AAGTGGAGTGTTTGTGTGGTGAACAACTCCTGGCCAATAGGAAAAGAAGAATCTGGAATTTCTGTCTGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp GAACTCCTGCTGGTGATTAGGGTAACTCACAGGAACTaGGCTATAGACAATGTATCATCTTTGAATGTATTG +
Preference number: 3 (lower is better)
Translates to: ELLLVIRVTHRN*AIDNVSSLNVL
Trigger: CAATACATTCAAAGATGATACATTGTCTATAGCTCAGTTCCTGTGAGTTACCCTAATCACCAGCAGGAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR TCA 72 bp TGTACAAATTTATTTTATGCAGATGGGTGTTTTGCCTaGAGAGATGTCTGTGTACCACACATATGCAGTGTC +
Preference number: 3 (lower is better)
Translates to: CTNLFYADGCFA*RDVCVPHICSV
Trigger: GACACTGCATATGTGTGGTACACAGACATCTCTTCAGGCAAAACACCCATCTGCATAAAATAAATTTGTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR GCA 72 bp CATTCCATTATTATGTTGAAAATACCATGGATAACATaGAGAACACACTTAGGCTTTTACTCCACAGAGAGC +
Preference number: 3 (lower is better)
Translates to: HSIIMLKIPWIT*RTHLGFYSTES
Trigger: GCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGTTATCCATGGTATTTTCAACATAATAATGGAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp AAACTCCACAATAAACCCGCACCTAACTACTGTGCTTaGAGAAAGCTACAATGTATAAAAACGGTGATTAAA +
Preference number: 3 (lower is better)
Translates to: KLHNKPAPNYCA*RKLQCIKTVIK
Trigger: TTTAATCACCGTTTTTATACATTGTAGCTTTCTCCAAGCACAGTAGTTAGGTGCGGGTTTATTGTGGAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CCA 72 bp GAGGTGAATACAGTAATATTGCTGTCACCAAGAAGGTaGACAACATCATTCATGGAAAATACTTTTGATGTC +
Preference number: 3 (lower is better)
Translates to: EVNTVILLSPRR*TTSFMENTFDV
Trigger: GACATCAAAAGTATTTTCCATGAATGATGTTGTCCACCTTCTTGGTGACAGCAATATTACTGTATTCACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR-3UTR CAA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGATTTGCTTTTATCTCTTaGTACCACGCTGTGGAAATA +
Preference number: 3 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRFAFIS*YHAVEI
Trigger: TATTTCCACAGCGTGGTACAAAGAGATAAAAGCAAA...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCGAGCGCCGGAGCGGCTaGAGCGCCAGGGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSERRSG*SARALQ
Trigger: TTGGAGAGCCCTGGCGCTGCAGCCGCTCCGGCGCTC...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAAAACTCGCTGGCGATaGCCTCTGTCCACCGCAGGT +
Preference number: 4 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSKTRWR*PLSTAG
Trigger: ACCTGCGGTGGACAGAGGGCATCGCCAGCGAGTTTT...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTGCGGTCCCTCCGCACTaGCGCAGGCTCCAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIAVPPH*RRLQGG
Trigger: CCCACCTTGGAGCCTGCGCCAGTGCGGAGGGACCGC...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCAGGGAGGTCCTCCGGTaGGACTTGCCACTGCAGCCG +
Preference number: 4 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSREVLR*DLPLQP
Trigger: CGGCTGCAGTGGCAAGTCTCACCGGAGGACCTCCCT...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCGCTTTATGCTGGCACTaGGGTCCCTCCGCACTGGCG +
Preference number: 4 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPALCWH*GPSALA
Trigger: CGCCAGTGCGGAGGGACCGCAGTGCCAGCATAAAGC...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCGTCCTCGCGCTCAACTaGGACCCAAACCGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPVLALN*DPNRSL
Trigger: CAGGGAGCGGTTTGGGTCCCAGTTGAGCGCGAGGAC...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGTATAGTTCTCACTaGAGGTCACGGTGGGGTTCA +
Preference number: 4 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSRYSSH*RSRWGS
Trigger: TGAACCCCACCGTGACCTTCAGTGAGAACTATACCT...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTGGTGAGACTTGCCACTaGAGCCGGACATCTCGCCGG +
Preference number: 4 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIGETCH*SRTSRR
Trigger: CCGGCGAGATGTCCGGCTGCAGTGGCAAGTCTCACC...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCGGCTTGTGGATGGCCTaGAAGGTGAGCTGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSGLWMA*KVSWVL
Trigger: CAGCACCCAGCTCACCTTCCAGGCCATCCACAAGCC...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAACGGTGGGGTTCACTCTaGGCTTGTGGATGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQRWGSL*ACGWPG
Trigger: TCCAGGCCATCCACAAGCCCAGAGTGAACCCCACCG...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGACGCCACCTAGGCAGCTaGGCAGGACCCCCGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRRHLGS*AGPPRR
Trigger: CCGCCGCGGGGGTCCTGCTCAGCTGCCTAGGTGGCG...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTAGTGATGCTGGTTCCTaGCTGGGATCCTCGTGGCCC +
Preference number: 4 (lower is better)
Translates to: TCRTHLGFYSTESSWFPISDAGS*LGSSWP
Trigger: GGGCCACGAGGATCCCAGTCAGGAACCAGCATCACT...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp TATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACCCCTCGGCAGGGAGAACACGGCCGCCAAGTATaGCAGGTAAGGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: YALEFQPCSEMLTPRQGEHGRQV*QVRSPG
Trigger: GCCTGGAGACCTTACCTGGCATACTTGGCGGCCGTG...TTCTCCCTGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCATCTGCTCTGAGGGATaGTGCAGAGGGACCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPICSEG*CRGTWS
Trigger: GGACCAGGTCCCTCTGCAGCATCCCTCAGAGCAGAT...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAACCCAAACCGCTCCCTaGGCGGAGCCGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTTQTAP*AEPARS
Trigger: GCTCCGGGCCGGCTCCGCCCAGGGAGCGGTTTGGGT...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAACGTGGCCCTCTCTTGTaGTCCCATTCTGAATGGCCC +
Preference number: 4 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQRGPLL*SHSEWP
Trigger: GGGCCATTCAGAATGGGACCACAAGAGAGGGCCACG...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCTGCTGCAGAGGGACCTaGTCCAGGGACTGGTTCTCT +
Preference number: 4 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSCCRGT*SRDWFS
Trigger: AGAGAACCAGTCCCTGGACCAGGTCCCTCTGCAGCA...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGAAGCGCCGAGGAGAGTTaGGGCGAGCGCCGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRSAEES*GERRSG
Trigger: GCCGCTCCGGCGCTCGCCTCAACTCTCCTCGGCGCT...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAATCCAAGAGTCAGGATTaGCAGCACTGGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQSKSQD*QHWVKG
Trigger: CCCCTTCACCCAGTGCTGTCAATCCTGACTCTTGGA...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp TATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACCCCTCGGCAGGGAGAAACTCTGGCCGGGACATaGAGAGATTCCAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: YALEFQPCSEMLTPRQGETLAGT*RDSRLQ
Trigger: CTGCAGCCTGGAATCTCTTCATGTCCCGGCCAGAGT...TTCTCCCTGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAAGCAGCGCGGCCGGCTaGAGCCAAGGGCTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTSSAAG*SQGLSC
Trigger: GCAGCTCAGCCCTTGGCTGCAGCCGGCCGCGCTGCT...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTTATGACAGACGGGGGTaGGATCTGAGGGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIYDRRG*DLRGQV
Trigger: GACCTGTCCCCTCAGATCCCACCCCCGTCTGTCATA...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCGCCGATGCTTTCCTCTaGGGTTCTCTCTGGCACTCA +
Preference number: 4 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPADAFL*GSLWHS
Trigger: TGAGTGCCAGAGAGAACCCCAGAGGAAAGCATCGGC...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 72 bp AGGAAGGGTGCTTTTCCCTCTGTGTTCCACACCAGTTaGAGGGGGAGGCATACACCTAAGATGCCAGAACAT +
Preference number: 4 (lower is better)
Translates to: RKGAFPSVFHTS*RGRHTPKMPEH
Trigger: ATGTTCTGGCATCTTAGGTGTATGCCTCCCCCTCAAACTGGTGTGGAACACAGAGGGAAAAGCACCCTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAAGGCGCACAGGAGACTaGAGAGCAGCGCGGCCGGCT +
Preference number: 4 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTRRTGD*RAARPA
Trigger: AGCCGGCCGCGCTGCTCTTCAGTCTCCTGTGCGCCT...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp TATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACCCCTCGGCAGGGAGAACTTGTGGTCCCATTCTaGATGGCCCATGAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: YALEFQPCSEMLTPRQGELVVPF*MAHELL
Trigger: GAGCAGCTCATGGGCCATTCAGAATGGGACCACAAG...TTCTCCCTGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCCAGCAATATCCACAGTaGTGCTGGTTCCTGACTGGG +
Preference number: 4 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPQQYPQ*CWFLTG
Trigger: CCCAGTCAGGAACCAGCATCACTGTGGATATTGCTG...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTCACAGCTGCTACATATaGCAGACGGGGGTGGGATCT +
Preference number: 4 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIHSCYI*QTGVGS
Trigger: AGATCCCACCCCCGTCTGTCATATGTAGCAGCTGTG...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp TATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACCCCTCGGCAGGGAGAATGGGCCACTTCTCTCTaGGGGTCCATCAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: YALEFQPCSEMLTPRQGEWATSL*GSISRI
Trigger: AATCCTGCTGATGGACCCTCAGAGAGAAGTGGCCCA...TTCTCCCTGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAAGAGATAAAGGATTCCTaGAGATTGGCCAGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQEIKDS*RLASCG
Trigger: CCCGCAGCTGGCCAATCTTCAGGAATCCTTTATCTC...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGATCGGCCGCCGCCTCCTaGCTCTTCTCCAGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRSAAAS*LFSSSP
Trigger: AGGCGAGCTGGAGAAGAGTCAGGAGGCGGCGGCCGA...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTAGTCCAGGTTATCCATaGCCAGGGGTTCTGGAGCAA +
Preference number: 4 (lower is better)
Translates to: TCRTHLGFYSTESSWFPISPGYP*PGVLEQ
Trigger: TTGCTCCAGAACCCCTGGTCATGGATAACCTGGACT...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAAGTAGTCATGCATGGCTaGAGCAACGTACAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQVVMHG*SNVQSH
Trigger: ATGGCTCTGTACGTTGCTGCAGCCATGCATGACTAC...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp ACACTTAAGCCATTTGCCAATCTTCTGGTAATCTACAGTGTTGTGTCTAAGTGTTCTGCTCGGCGTACCTaGCCAGCAGCAGCCCAAGCA +
Preference number: 4 (lower is better)
Translates to: TLKPFANLLVIYSVVSKCSARRT*PAAAQA
Trigger: TGCTTGGGCTGCTGCTGGCCAGGTACGCCGAGCAGA...ACACTTAGACACAACACTGTAGATTACCAGAAGATTGGCAAATGGCTTAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAATGTTTGGTTTCAGCATaGCTGGGCCACTTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQCLVSA*LGHFSL
Trigger: CAGAGAGAAGTGGCCCAGCCATGCTGAAACCAAACA...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCAGGACCCACGATGTGTaGGATAAAGGATTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPRTHDV*DKGFLK
Trigger: CTTCAGGAATCCTTTATCTCACACATCGTGGGTCCT...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAAGGGACTGGTTCTCTGTaGCTGATAAACACTGTTCCT +
Preference number: 4 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQGTGSL*LINTVP
Trigger: AGGAACAGTGTTTATCAGGCACAGAGAACCAGTCCC...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp TATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACCCCTCGGCAGGGAGAATCAGGCGCTTGGAAATaGCCTGCTTGTCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: YALEFQPCSEMLTPRQGESGAWK*PACLSP
Trigger: TGGAGAAAGACAAGCAGGCCATTTCCAAGCGCCTGA...TTCTCCCTGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGAGCGCAGGCTCCAAGGTaGGCAGACCTGTGGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRAQAPR*ADLWQR
Trigger: CCTCTGCCACAGGTCTGCCCACCTTGGAGCCTGCGC...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCTGTCCAGGAAGATCATaGTCTGGGAAGTATAGGTGC +
Preference number: 4 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPCPGRS*SGKYRC
Trigger: GCACCTATACTTCCCAGACCATGATCTTCCTGGACA...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCCATGACCAGGGGTTCTaGAGCAAGAATTGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSHDQGF*SKNWFV
Trigger: GACAAACCAATTCTTGCTCCAGAACCCCTGGTCATG...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAATCTGCAGAATGTCACTaGTGTCACTGTTGTTGTTGG +
Preference number: 4 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQSAECH*CHCCCW
Trigger: CCAACAACAACAGTGACAGCAGTGACATTCTGCAGA...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCGACGGTCGTTTTCATTaGTCCAATCTATCCCGACAT +
Preference number: 4 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPDGRFH*SNLSRH
Trigger: ATGTCGGGATAGATTGGACCAATGAAAACGACCGTC...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp ACACTTAAGCCATTTGCCAATCTTCTGGTAATCTACAGTGTTGTGTCTAAGTGTAGGATCTGCTTTTGGTaGGAGTCGTCAACCCTGGGG +
Preference number: 4 (lower is better)
Translates to: TLKPFANLLVIYSVVSKCRICFW*ESSTLG
Trigger: CCCCAGGGTTGACGACTCTCACCAAAAGCAGATCCT...ACACTTAGACACAACACTGTAGATTACCAGAAGATTGGCAAATGGCTTAAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAGTGAAGCACTGTTGCTaGCAGGACTGCTGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTVKHCC*QDCWQV
Trigger: CACCTGCCAGCAGTCCTGTCAGCAACAGTGCTTCAC...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp TATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACCCCTCGGCAGGGAGAATTTAGCAAGGCCACCTaGCCTGTTTTGCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: YALEFQPCSEMLTPRQGEFSKAT*PVLLFS
Trigger: GCTAAAAAGCAAAACAGGCCAGGTGGCCTTGCTAAA...TTCTCCCTGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAAGGATTCCTGAAGATTaGCCAGCTGCGGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTRIPED*PAAGQS
Trigger: GCTCTGCCCCGCAGCTGGCCAATCTTCAGGAATCCT...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGATCACAGGTCTGGCTGTaGAGCCAGGGTCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRSQVWL*SQGLLC
Trigger: GCAGAGGAGACCCTGGCTCCACAGCCAGACCTGTGA...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp TATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACCCCTCGGCAGGGAGAACAACTGATCCATAATTaGGTCCAGGTTATCCATGAC +
Preference number: 4 (lower is better)
Translates to: YALEFQPCSEMLTPRQGEQLIHN*VQVIHD
Trigger: GTCATGGATAACCTGGACTCAATTATGGATCAGTTG...TTCTCCCTGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGATCCTCCGGTGAGACTTaGCACTGCAGCCGGACATCT +
Preference number: 4 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRSSGET*HCSRTS
Trigger: AGATGTCCGGCTGCAGTGGCAAGTCTCACCGGAGGA...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp ACACTTAAGCCATTTGCCAATCTTCTGGTAATCTACAGTGTTGTGTCTAAGTGTCTCTGGGGTTCTCTCTaGCACTCAGCTTCCTCTTCA +
Preference number: 4 (lower is better)
Translates to: TLKPFANLLVIYSVVSKCLWGSL*HSASSS
Trigger: TGAAGAGGAAGCTGAGTGCCAGAGAGAACCCCAGAG...ACACTTAGACACAACACTGTAGATTACCAGAAGATTGGCAAATGGCTTAAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTCGTGTAGAACATCGGTaGCATGGATTCTGTTATGAT +
Preference number: 4 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIRVEHR*HGFCYD
Trigger: ATCATAACAGAATCCATGCCACCGATGTTCTACACG...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp CTTCGAGAATTATTAGGTGGCTCTTTAGGTCACACACTTGGTGGGTTTCCACCCCACGTGATACATTTTTaGAAACACATATCCCATGTG +
Preference number: 4 (lower is better)
Translates to: LRELLGGSLGHTLGGFPPHVIHF*KHISHV
Trigger: CACATGGGATATGTGTTTTCAAAAATGTATCACGTG...GGGTGGAAACCCACCAAGTGTGTGACCTAAAGAGCCACCTAATAATTCTCGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp ACACTTAAGCCATTTGCCAATCTTCTGGTAATCTACAGTGTTGTGTCTAAGTGTTTCGGGGAGCTATACTaGTTTCACAGGCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: TLKPFANLLVIYSVVSKCFGELY*FHRLRP
Trigger: AGGACGAAGCCTGTGAAAGCAGTATAGCTCCCCGAA...ACACTTAGACACAACACTGTAGATTACCAGAAGATTGGCAAATGGCTTAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGATTCACTCTGGGCTTGTaGATGGCCTGGAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRFTLGL*MAWKVS
Trigger: GCTCACCTTCCAGGCCATCCACAAGCCCAGAGTGAA...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCTTTTTAGCTTTTACATaGTTAGCTGCAGAGACAGCA +
Preference number: 4 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSFLAFT*LAAETA
Trigger: TGCTGTCTCTGCAGCTAACCATGTAAAAGCTAAAAA...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp TATGCATTAGAATTCCAACCATGTTCTGAAATGCTCACCCCTCGGCAGGGAGAATTCTGGAGCAAGAATTaGTTTGTCCAGGAAGATCAT +
Preference number: 4 (lower is better)
Translates to: YALEFQPCSEMLTPRQGEFWSKN*FVQEDH
Trigger: ATGATCTTCCTGGACAAACCAATTCTTGCTCCAGAA...TTCTCCCTGCCGAGGGGTGAGCATTTCAGAACATGGTTGGAATTCTAATGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 72 bp GTTTCCTCTCTAAGCTGCACAGTTCCTCATGAGTTCTaGTCCTTTATGACTTTCTATGTCACAGTGACCTCT +
Preference number: 4 (lower is better)
Translates to: VSSLSCTVPHEF*SFMTFYVTVTS
Trigger: AGAGGTCACTGTGACATAGAAAGTCATAAAGGACAAGAACTCATGAGGAACTGTGCAGCTTAGAGAGGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 72 bp CACACTTGGTGGGTTTCCACCCTTCCATTCAGTTTGTaGCCTTTTGGGTTGAGAACAACAACAACTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HTWWVSTLPFSL*PFGLRTTTTCF
Trigger: AAAACAAGTTGTTGTTGTTCTCAACCCAAAAGGCAACAAACTGAATGGAAGGGTGGAAACCCACCAAGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 72 bp CAGAACAGACAGAAATTCCAGATTCTTCTTTTCCTATaGGCCAGGAGTTGTTCACCACACAAACACTCCACT +
Preference number: 4 (lower is better)
Translates to: QNRQKFQILLFL*ARSCSPHKHST
Trigger: AGTGGAGTGTTTGTGTGGTGAACAACTCCTGGCCAATAGGAAAAGAAGAATCTGGAATTTCTGTCTGTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTTTGTCATCTGGCACGTaGTACATTTTTGAAAACACA +
Preference number: 4 (lower is better)
Translates to: TCRTHLGFYSTESSWFPILSSGT*YIFENT
Trigger: TGTGTTTTCAAAAATGTATCACGTGCCAGATGACAA...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR GCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACATTGATAGCCTGGATCTaGTCTGAGGGATGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTLIAWI*SEGCCR
Trigger: TCTGCAGCATCCCTCAGAGCAGATCCAGGCTATCAA...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAGGCATTTGTCCTCCCTaGGTGATCGTAGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTGICPP*VIVVMH
Trigger: ATGCATGACTACGATCACCCAGGGAGGACAAATGCC...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 72 bp ATGACTACAAATTCATTATCAACAGAGATAGAAACATaGCCATGGAAATTCAACCCCATCCAGGACCTCGGG +
Preference number: 4 (lower is better)
Translates to: MTTNSLSTEIET*PWKFNPIQDLG
Trigger: CCCGAGGTCCTGGATGGGGTTGAATTTCCATGGCAATGTTTCTATCTCTGTTGATAATGAATTTGTAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGAGTCATCTGTTCTGTTTaGTTTCAGCATGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRVICSV*FQHGWA
Trigger: GGCCCAGCCATGCTGAAACCAAACAGAACAGATGAC...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACATTCCAGGTGTTCAACTaGTCCATAATTGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTFQVFN*SIIESR
Trigger: CCTGGACTCAATTATGGATCAGTTGAACACCTGGAA...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 72 bp CTATCATTCCTATTGCAGGGCAAGAGTTACATTTATTaGCCTTCACTGAAGAAGGATTCTTGCTTCGGAGTA +
Preference number: 4 (lower is better)
Translates to: LSFLLQGKSYIY*PSLKKDSCFGV
Trigger: TACTCCGAAGCAAGAATCCTTCTTCAGTGAAGGCAAATAAATGTAACTCTTGCCCTGCAATAGGAATGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 72 bp GAGTTACATTTATTTGCCTTCACTGAAGAAGGATTCTaGCTTCGGAGTAGATTTACCAACAGAGACATATGG +
Preference number: 4 (lower is better)
Translates to: ELHLFAFTEEGF*LRSRFTNRDIW
Trigger: CCATATGTCTCTGTTGGTAAATCTACTCCGAAGCAAGAATCCTTCTTCAGTGAAGGCAAATAAATGTAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 72 bp GAAATTCCAGATTCTTCTTTTCCTATTGGCCAGGAGTaGTTCACCACACAAACACTCCACTTCTATAAAGAA +
Preference number: 4 (lower is better)
Translates to: EIPDSSFPIGQE*FTTQTLHFYKE
Trigger: TTCTTTATAGAAGTGGAGTGTTTGTGTGGTGAACAACTCCTGGCCAATAGGAAAAGAAGAATCTGGAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
3UTR CAA 72 bp TGCAGTAGCCTTCAGACAATTGTAAAGGCAATTAAATaGCTAATGACACAAAAACCAAGGGAGGCATCCAAT +
Preference number: 4 (lower is better)
Translates to: CSSLQTIVKAIK*LMTQKPREASN
Trigger: ATTGGATGCCTCCCTTGGTTTTTGTGTCATTAGCAATTTAATTGCCTTTACAATTGTCTGAAGGCTACTGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR TCA 90 bp CCTTTTCACAAAGAAGCAATAAGGATCAAATCAACTGTTCAATCAGGAATCAGAAGAGACAGCATAGGATaGAGTGAAGGATCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: PFHKEAIRIKSTVQSGIRRDSIG*SEGSAF
Trigger: AAAAGCAGATCCTTCACTTCATCCTATGCTGTCTCT...TCTGATTCCTGATTGAACAGTTGATTTGATCCTTATTGCTTCTTTGTGAAAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 90 bp AGGAGACTGAAGAGCAGCGCGGCCGGCTGCAGCCAAGGGCTGAGCTaGGCGCCGCCCCCGGGAGCACCTCCCCGAGGGCCCGGGAAGACG +
Preference number: 5 (lower is better)
Translates to: RRLKSSAAGCSQGLS*APPPGAPPRGPGKT
Trigger: CGTCTTCCCGGGCCCTCGGGGAGGTGCTCCCGGGGGCGGCGCGCAGCTCAGCCCTTGGCTGCAGCCGGCCGCGCTGCTCTTCAGTCTCCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 90 bp GCGGGCAGCGACAGCAGGCGACCGTCCCCCACGCCCAAGGAGAGCTaGACCAGCGCTTCCCCGGCGCAGCAGGCGGCCAACAGCGCGACG +
Preference number: 5 (lower is better)
Translates to: AGSDSRRPSPTPKES*TSASPAQQAANSAT
Trigger: CGTCGCGCTGTTGGCCGCCTGCTGCGCCGGGGAAGCGCTGGTGCAGCTCTCCTTGGGCGTGGGGGACGGTCGCCTGCTGTCGCTGCCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 90 bp CCAGCCTCAGCCTCAGCACCAGCCATGTCGCGCCACCTAGGCAGCTaGGCAGGACCCCCGCGGCGGGCAGCGACAGCAGGCGACCGTCCC +
Preference number: 5 (lower is better)
Translates to: PASASAPAMSRHLGS*AGPPRRAATAGDRP
Trigger: GGGACGGTCGCCTGCTGTCGCTGCCCGCCGCGGGGGTCCTGCTCAGCTGCCTAGGTGGCGCGACATGGCTGGTGCTGAGGCTGAGGCTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 90 bp CCCTGGGTATGCAGGGCAGGGAGGTCCTCCGGTGAGACTTGCCACTaGAGCCGGACATCTCGCCGGCCACCACCGAGCTGGACCGCCTCC +
Preference number: 5 (lower is better)
Translates to: PWVCRAGRSSGETCH*SRTSRRPPPSWTAS
Trigger: GGAGGCGGTCCAGCTCGGTGGTGGCCGGCGAGATGTCCGGCTGCAGTGGCAAGTCTCACCGGAGGACCTCCCTGCCCTGCATACCCAGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 90 bp CTCCTCTTCCACCCCGGAATCTCTTCCTTGGTCCTCGCGCTCAACTaGGACCCAAACCGCTCCCTGGGCGGAGCCGGCCCGGAGCACTGC +
Preference number: 5 (lower is better)
Translates to: LLFHPGISSLVLALN*DPNRSLGGAGPEHC
Trigger: GCAGTGCTCCGGGCCGGCTCCGCCCAGGGAGCGGTTTGGGTCCCAGTTGAGCGCGAGGACCAAGGAAGAGATTCCGGGGTGGAAGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 90 bp CCGAGCTGGACCGCCTCCTCCTCTTCCACCCCGGAATCTCTTCCTTaGTCCTCGCGCTCAACTGGGACCCAAACCGCTCCCTGGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PSWTASSSSTPESLP*SSRSTGTQTAPWAE
Trigger: CTCCGCCCAGGGAGCGGTTTGGGTCCCAGTTGAGCGCGAGGACCAAGGAAGAGATTCCGGGGTGGAAGAGGAGGAGGCGGTCCAGCTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 90 bp AGGGGCTTCGTGCGGCTTTATGCTGGCACTGCGGTCCCTCCGCACTaGCGCAGGCTCCAAGGTGGGCAGACCTGTGGCAGAGGTGGTAGT +
Preference number: 5 (lower is better)
Translates to: RGFVRLYAGTAVPPH*RRLQGGQTCGRGGS
Trigger: ACTACCACCTCTGCCACAGGTCTGCCCACCTTGGAGCCTGCGCCAGTGCGGAGGGACCGCAGTGCCAGCATAAAGCCGCACGAAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 90 bp CTCGGCGTACCTGGCCAGCAGCAGCCCAAGCACGGCCGCCAAGTATaGCAGGTAAGGTCTCCAGGCGACCTTGAACCTCTCCAGAGAAAC +
Preference number: 5 (lower is better)
Translates to: LGVPGQQQPKHGRQV*QVRSPGDLEPLQRN
Trigger: GTTTCTCTGGAGAGGTTCAAGGTCGCCTGGAGACCTTACCTGGCATACTTGGCGGCCGTGCTTGGGCTGCTGCTGGCCAGGTACGCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 90 bp ACAGTGATGCTGGTTCCTGACTGGGATCCTCGTGGCCCTCTCTTGTaGTCCCATTCTGAATGGCCCATGAGCTGCTCCCTGGGTATGCAG +
Preference number: 5 (lower is better)
Translates to: TVMLVPDWDPRGPLL*SHSEWPMSCSLGMQ
Trigger: CTGCATACCCAGGGAGCAGCTCATGGGCCATTCAGAATGGGACCACAAGAGAGGGCCACGAGGATCCCAGTCAGGAACCAGCATCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 90 bp ACGGTGGGGTTCACTCTGGGCTTGTGGATGGCCTGGAAGGTGAGCTaGGTGCTGAGCAAGTTGCTTACGGCCCTCAAGGATGTACACACA +
Preference number: 5 (lower is better)
Translates to: TVGFTLGLWMAWKVS*VLSKLLTALKDVHT
Trigger: TGTGTGTACATCCTTGAGGGCCGTAAGCAACTTGCTCAGCACCCAGCTCACCTTCCAGGCCATCCACAAGCCCAGAGTGAACCCCACCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGCCTCGTGGCCCTCTCTaGTGGTCCCATTCTGAATGG +
Preference number: 5 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSPRGPL*WSHSEW
Trigger: CCATTCAGAATGGGACCACAAGAGAGGGCCACGAGG...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 90 bp CCGTGTGTAAATCCACTGTCAGAATCGGAGTCGCTTGCTGAGCCGTaGTCACCAATCACACTTGGGAGGCCAGGAATCGGCTGTGTTGTG +
Preference number: 5 (lower is better)
Translates to: PCVNPLSESESLAEP*SPITLGRPGIGCVV
Trigger: CACAACACAGCCGATTCCTGGCCTCCCAAGTGTGATTGGTGATCACGGCTCAGCAAGCGACTCCGATTCTGACAGTGGATTTACACACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 90 bp CATGTGTCCGTGTGTAAATCCACTGTCAGAATCGGAGTCGCTTGCTaGGCCGTGATCACCAATCACACTTGGGAGGCCAGGAATCGGCTG +
Preference number: 5 (lower is better)
Translates to: HVSVCKSTVRIGVAC*AVITNHTWEARNRL
Trigger: CAGCCGATTCCTGGCCTCCCAAGTGTGATTGGTGATCACGGCTCAGCAAGCGACTCCGATTCTGACAGTGGATTTACACACGGACACATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 90 bp CGGTGTCTCCGGAATCATCACTGTCATCTACCCATTTTCCTGGCATaGGTCCCGCAGAGTCATAGGAGTGGCAGAGAGGACCCACGATGT +
Preference number: 5 (lower is better)
Translates to: RCLRNHHCHLPIFLA*VPQSHRSGREDPRC
Trigger: ACATCGTGGGTCCTCTCTGCCACTCCTATGACTCTGCGGGACTCATGCCAGGAAAATGGGTAGATGACAGTGATGATTCCGGAGACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 90 bp TCTTCCTCTTCCTCCTTGATAGCCTGGATCTGCTCTGAGGGATGCTaGAGAGGGACCTGGTCCAGGGACTGGTTCTCTGTGCCTGATAAA +
Preference number: 5 (lower is better)
Translates to: SSSSSLIAWICSEGC*RGTWSRDWFSVPDK
Trigger: TTTATCAGGCACAGAGAACCAGTCCCTGGACCAGGTCCCTCTGCAGCATCCCTCAGAGCAGATCCAGGCTATCAAGGAGGAAGAGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 90 bp GTCATCGGTGTCTCCGGAATCATCACTGTCATCTACCCATTTTCCTaGCATGAGTCCCGCAGAGTCATAGGAGTGGCAGAGAGGACCCAC +
Preference number: 5 (lower is better)
Translates to: VIGVSGIITVIYPFS*HESRRVIGVAERTH
Trigger: GTGGGTCCTCTCTGCCACTCCTATGACTCTGCGGGACTCATGCCAGGAAAATGGGTAGATGACAGTGATGATTCCGGAGACACCGATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 90 bp TCCTTGATAGCCTGGATCTGCTCTGAGGGATGCTGCAGAGGGACCTaGTCCAGGGACTGGTTCTCTGTGCCTGATAAACACTGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: SLIAWICSEGCCRGT*SRDWFSVPDKHCSS
Trigger: AGAGGAACAGTGTTTATCAGGCACAGAGAACCAGTCCCTGGACCAGGTCCCTCTGCAGCATCCCTCAGAGCAGATCCAGGCTATCAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGGTGAAGGATCTGCTTTaGGTGAGAGTCGTCAACCCT +
Preference number: 5 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSVKDLL*VRVVNP
Trigger: AGGGTTGACGACTCTCACCAAAAGCAGATCCTTCAC...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp CACACCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGTGTCATCTGTTCTGTTaGGTTTCAGCATGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: HTFNPSTREAEAGGFLSSCHLFC*VSAWLG
Trigger: GCCCAGCCATGCTGAAACCAAACAGAACAGATGACA...CGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 90 bp GTCATCTGTTCTGTTTGGTTTCAGCATGGCTGGGCCACTTCTCTCTaGGGGTCCATCAGCAGGATTCCCTTGCGAATAAGGTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: VICSVWFQHGWATSL*GSISRIPLRIRSAT
Trigger: TGTGGCAGACCTTATTCGCAAGGGAATCCTGCTGATGGACCCTCAGAGAGAAGTGGCCCAGCCATGCTGAAACCAAACAGAACAGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 90 bp CGTGATCACCAATCACACTTGGGAGGCCAGGAATCGGCTGTGTTGTaGGATACCACACAGCGTGTAGAACATCGGTGGCATGGATTCTGT +
Preference number: 5 (lower is better)
Translates to: RDHQSHLGGQESAVL*DTTQRVEHRWHGFC
Trigger: ACAGAATCCATGCCACCGATGTTCTACACGCTGTGTGGTATCTCACAACACAGCCGATTCCTGGCCTCCCAAGTGTGATTGGTGATCACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 90 bp GTCCAGGAAGATCATGGTCTGGGAAGTATAGGTGCCACAAGCCGATaGTTTCCTCTGGGGTTCTCTCTGGCACTCAGCTTCCTCTTCATT +
Preference number: 5 (lower is better)
Translates to: VQEDHGLGSIGATSR*FPLGFSLALSFLFI
Trigger: AATGAAGAGGAAGCTGAGTGCCAGAGAGAACCCCAGAGGAAAGCATCGGCTTGTGGCACCTATACTTCCCAGACCATGATCTTCCTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 90 bp TGGATCTGCTCTGAGGGATGCTGCAGAGGGACCTGGTCCAGGGACTaGTTCTCTGTGCCTGATAAACACTGTTCCTCTTCAATCACTTTC +
Preference number: 5 (lower is better)
Translates to: WICSEGCCRGTWSRD*FSVPDKHCSSSITF
Trigger: GAAAGTGATTGAAGAGGAACAGTGTTTATCAGGCACAGAGAACCAGTCCCTGGACCAGGTCCCTCTGCAGCATCCCTCAGAGCAGATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 90 bp CTGAGGGATGCTGCAGAGGGACCTGGTCCAGGGACTGGTTCTCTGTaGCTGATAAACACTGTTCCTCTTCAATCACTTTCTTCCACATCA +
Preference number: 5 (lower is better)
Translates to: LRDAAEGPGPGTGSL*LINTVPLQSLSSTS
Trigger: TGATGTGGAAGAAAGTGATTGAAGAGGAACAGTGTTTATCAGGCACAGAGAACCAGTCCCTGGACCAGGTCCCTCTGCAGCATCCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp GATGTAACCAGCCTGACTCCTACTCAGACTCTGCAGCTTTGTTCAGACTTCCAACGCAGGTGGAGTTCTTaGCATTTAGCAGGCCCGTTG +
Preference number: 5 (lower is better)
Translates to: DVTSLTPTQTLQLCSDFQRRWSS*HLAGPL
Trigger: CAACGGGCCTGCTAAATGCAAAGAACTCCACCTGCG...TTGGAAGTCTGAACAAAGCTGCAGAGTCTGAGTAGGAGTCAGGCTGGTTACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTTGGGTGCTGAGCAAGTaGCTTACGGCCCTCAAGGAT +
Preference number: 5 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIWVLSK*LTALKD
Trigger: ATCCTTGAGGGCCGTAAGCAACTTGCTCAGCACCCA...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 90 bp TTGCATTTAGCAGGCCCGTTGATGTCAGCCAGCTTTATACACATCTaGCACACCAGGAGACGGTCGTTTTCATTGGTCCAATCTATCCCG +
Preference number: 5 (lower is better)
Translates to: LHLAGPLMSASFIHI*HTRRRSFSLVQSIP
Trigger: CGGGATAGATTGGACCAATGAAAACGACCGTCTCCTGGTGTGTCAGATGTGTATAAAGCTGGCTGACATCAACGGGCCTGCTAAATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTATCAGCAGGATTCCCTaGCGAATAAGGTCTGCCACA +
Preference number: 5 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIISRIP*RIRSAT
Trigger: TGTGGCAGACCTTATTCGCAAGGGAATCCTGCTGAT...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCAGACGGTCGTTTTCATaGGTCCAATCTATCCCGACA +
Preference number: 5 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSRRSFS*VQSIPT
Trigger: TGTCGGGATAGATTGGACCAATGAAAACGACCGTCT...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp CCACGCTGTGGAAATAGAGTTGGGGAGATTTGGACCCTGGCATTAAAAACTTCCGCCACCTGGCCTGTTTaGCTTTTTAGCTTTTACATG +
Preference number: 5 (lower is better)
Translates to: PRCGNRVGEIWTLALKTSATWPV*LFSFYM
Trigger: CATGTAAAAGCTAAAAAGCAAAACAGGCCAGGTGGC...GGAAGTTTTTAATGCCAGGGTCCAAATCTCCCCAACTCTATTTCCACAGCGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAGGTCTCCAGGCGACCTaGAACCTCTCCAGAGAAACC +
Preference number: 5 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTGLQAT*NLSRET
Trigger: GGTTTCTCTGGAGAGGTTCAAGGTCGCCTGGAGACC...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp ACACTTAAGCCATTTGCCAATCTTCTGGTAATCTACAGTGTTGTGTCTAAGTGTAGGAAGCGGAAGTGCTaGAATTCCACGTGGTCCAGG +
Preference number: 5 (lower is better)
Translates to: TLKPFANLLVIYSVVSKCRKRKC*NSTWSR
Trigger: CCTGGACCACGTGGAATTCAAGCACTTCCGCTTCCT...ACACTTAGACACAACACTGTAGATTACCAGAAGATTGGCAAATGGCTTAAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp ACACTTAAGCCATTTGCCAATCTTCTGGTAATCTACAGTGTTGTGTCTAAGTGTCTTCTTCTCAGGCGCTaGGAAATGGCCTGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: TLKPFANLLVIYSVVSKCLLLRR*EMACLS
Trigger: AGACAAGCAGGCCATTTCCAAGCGCCTGAGAAGAAG...ACACTTAGACACAACACTGTAGATTACCAGAAGATTGGCAAATGGCTTAAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp ACATGCAGAACACACTTAGGCTTTTACTCCACAGAGAGCAGCTGGTTCCCAATTAAGGTGCTGAGTTATTaGGCAGTAGATTCTCCTTCT +
Preference number: 5 (lower is better)
Translates to: TCRTHLGFYSTESSWFPIKVLSY*AVDSPS
Trigger: AGAAGGAGAATCTACTGCCAAATAACTCAGCACCTT...AATTGGGAACCAGCTGCTCTCTGTGGAGTAAAAGCCTAAGTGTGTTCTGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 90 bp CCCAGACAGGCATCCATATTTGTCATCTGGCACGTGATACATTTTTaGAAACACATATCCCATGTGTCCGTGTGTAAATCCACTGTCAGA +
Preference number: 5 (lower is better)
Translates to: PRQASIFVIWHVIHF*KHISHVSVCKSTVR
Trigger: TCTGACAGTGGATTTACACACGGACACATGGGATATGTGTTTTCAAAAATGTATCACGTGCCAGATGACAAATATGGATGCCTGTCTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp ACACTTAAGCCATTTGCCAATCTTCTGGTAATCTACAGTGTTGTGTCTAAGTGTGGAGCAAGAATTGGTTaGTCCAGGAAGATCATGGTC +
Preference number: 5 (lower is better)
Translates to: TLKPFANLLVIYSVVSKCGARIG*SRKIMV
Trigger: GACCATGATCTTCCTGGACAAACCAATTCTTGCTCC...ACACTTAGACACAACACTGTAGATTACCAGAAGATTGGCAAATGGCTTAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp AAGATAGTTATAGTGGGTATTTTACTAAAGAGCCCAGAGGACTCAGGATATACAGTTCTGGAGCAAGAATaGGTTTGTCCAGGAAGATCA +
Preference number: 5 (lower is better)
Translates to: KIVIVGILLKSPEDSGYTVLEQE*VCPGRS
Trigger: TGATCTTCCTGGACAAACCAATTCTTGCTCCAGAAC...TGTATATCCTGAGTCCTCTGGGCTCTTTAGTAAAATACCCACTATAACTATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS-3UTR CAA 90 bp ACACTTAAGCCATTTGCCAATCTTCTGGTAATCTACAGTGTTGTGTCTAAGTGTGCACGTGATACATTTTaGAAAACACATATCCCATGT +
Preference number: 5 (lower is better)
Translates to: TLKPFANLLVIYSVVSKCARDTF*KTHIPC
Trigger: ACATGGGATATGTGTTTTCAAAAATGTATCACGTGC...ACACTTAGACACAACACTGTAGATTACCAGAAGATTGGCAAATGGCTTAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 72 bp CACGGACAGGGAGCCCGCGCACAGCGCCGAGGAGAGTaGAGGCGAGCGCCGGAGCGGCTGCAGCGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: HGQGARAQRRGE*RRAPERLQRQG
Trigger: GCCCTGGCGCTGCAGCCGCTCCGGCGCTCGCCTCAACTCTCCTCGGCGCTGTGCGCGGGCTCCCTGTCCGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp ACGGACAGGGAGCCCGCGCACAGCGCCGAGGAGAGTTaGGGCGAGCGCCGGAGCGGCTGCAGCGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: TDREPAHSAEES*GERRSGCSARA
Trigger: AGCCCTGGCGCTGCAGCCGCTCCGGCGCTCGCCTCAACTCTCCTCGGCGCTGTGCGCGGGCTCCCTGTCCGT
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp GCCTCAGCACCAGCCATGTCGCGCCACCTAGGCAGCTaGGCAGGACCCCCGCGGCGGGCAGCGACAGCAGGC +
Preference number: 6 (lower is better)
Translates to: ASAPAMSRHLGS*AGPPRRAATAG
Trigger: GCCTGCTGTCGCTGCCCGCCGCGGGGGTCCTGCTCAGCTGCCTAGGTGGCGCGACATGGCTGGTGCTGAGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 72 bp GACAGCAGGCGACCGTCCCCCACGCCCAAGGAGAGCTaGACCAGCGCTTCCCCGGCGCAGCAGGCGGCCAAC +
Preference number: 6 (lower is better)
Translates to: DSRRPSPTPKES*TSASPAQQAAN
Trigger: GTTGGCCGCCTGCTGCGCCGGGGAAGCGCTGGTGCAGCTCTCCTTGGGCGTGGGGGACGGTCGCCTGCTGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 72 bp CTGGGCGGAGCCGGCCCGGAGCACTGCGGCAGGATCTaGTCGGCGTACCTGGCCAGCAGCAGCCCAAGCACG +
Preference number: 6 (lower is better)
Translates to: LGGAGPEHCGRI*SAYLASSSPST
Trigger: CGTGCTTGGGCTGCTGCTGGCCAGGTACGCCGAGCAGATCCTGCCGCAGTGCTCCGGGCCGGCTCCGCCCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp TGGTCCTCGCGCTCAACTGGGACCCAAACCGCTCCCTaGGCGGAGCCGGCCCGGAGCACTGCGGCAGGATCT +
Preference number: 6 (lower is better)
Translates to: WSSRSTGTQTAP*AEPARSTAAGS
Trigger: AGATCCTGCCGCAGTGCTCCGGGCCGGCTCCGCCCAGGGAGCGGTTTGGGTCCCAGTTGAGCGCGAGGACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp GCCCGGAGCACTGCGGCAGGATCTGCTCGGCGTACCTaGCCAGCAGCAGCCCAAGCACGGCCGCCAAGTATG +
Preference number: 6 (lower is better)
Translates to: ARSTAAGSARRT*PAAAQARPPSM
Trigger: CATACTTGGCGGCCGTGCTTGGGCTGCTGCTGGCCAGGTACGCCGAGCAGATCCTGCCGCAGTGCTCCGGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp CACCCCGGAATCTCTTCCTTGGTCCTCGCGCTCAACTaGGACCCAAACCGCTCCCTGGGCGGAGCCGGCCCG +
Preference number: 6 (lower is better)
Translates to: HPGISSLVLALN*DPNRSLGGAGP
Trigger: CGGGCCGGCTCCGCCCAGGGAGCGGTTTGGGTCCCAGTTGAGCGCGAGGACCAAGGAAGAGATTCCGGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp TGCTCCCTGGGTATGCAGGGCAGGGAGGTCCTCCGGTaGGACTTGCCACTGCAGCCGGACATCTCGCCGGCC +
Preference number: 6 (lower is better)
Translates to: CSLGMQGREVLR*DLPLQPDISPA
Trigger: GGCCGGCGAGATGTCCGGCTGCAGTGGCAAGTCTCACCGGAGGACCTCCCTGCCCTGCATACCCAGGGAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 72 bp TGGGTGAAGGGGCTTCGTGCGGCTTTATGCTGGCACTaGGGTCCCTCCGCACTGGCGCAGGCTCCAAGGTGG +
Preference number: 6 (lower is better)
Translates to: WVKGLRAALCWH*GPSALAQAPRW
Trigger: CCACCTTGGAGCCTGCGCCAGTGCGGAGGGACCGCAGTGCCAGCATAAAGCCGCACGAAGCCCCTTCACCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp CAGGGCTCTCCAACAACAGCCGGAGCCCCGAGGGGATaGAGAGGACTCGCCACGATGGCGGTGGTTCCCTCT +
Preference number: 6 (lower is better)
Translates to: QGSPTTAGAPRG*RGLATMAVVPS
Trigger: AGAGGGAACCACCGCCATCGTGGCGAGTCCTCTCCATCCCCTCGGGGCTCCGGCTGTTGTTGGAGAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 90 bp ACCGAGCTGGACCGCCTCCTCCTCTTCCACCCCGGAATCTCTTCCTaGGTCCTCGCGCTCAACTGGGACCCAAACCGCTCCCTGGGCGGA +
Preference number: 6 (lower is better)
Translates to: TELDRLLLFHPGISS*VLALNWDPNRSLGG
Trigger: TCCGCCCAGGGAGCGGTTTGGGTCCCAGTTGAGCGCGAGGACCAAGGAAGAGATTCCGGGGTGGAAGAGGAGGAGGCGGTCCAGCTCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 72 bp CCTGGCCAGCAGCAGCCCAAGCACGGCCGCCAAGTATaGCAGGTAAGGTCTCCAGGCGACCTTGAACCTCTC +
Preference number: 6 (lower is better)
Translates to: PGQQQPKHGRQV*QVRSPGDLEPL
Trigger: GAGAGGTTCAAGGTCGCCTGGAGACCTTACCTGGCATACTTGGCGGCCGTGCTTGGGCTGCTGCTGGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 72 bp GACCGCCTCCTCCTCTTCCACCCCGGAATCTCTTCCTaGGTCCTCGCGCTCAACTGGGACCCAAACCGCTCC +
Preference number: 6 (lower is better)
Translates to: DRLLLFHPGISS*VLALNWDPNRS
Trigger: GGAGCGGTTTGGGTCCCAGTTGAGCGCGAGGACCAAGGAAGAGATTCCGGGGTGGAAGAGGAGGAGGCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp CTGGGATCCTCGTGGCCCTCTCTTGTGGTCCCATTCTaGATGGCCCATGAGCTGCTCCCTGGGTATGCAGGG +
Preference number: 6 (lower is better)
Translates to: LGSSWPSLVVPF*MAHELLPGYAG
Trigger: CCCTGCATACCCAGGGAGCAGCTCATGGGCCATTCAGAATGGGACCACAAGAGAGGGCCACGAGGATCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp GATCCTCGTGGCCCTCTCTTGTGGTCCCATTCTGAATaGCCCATGAGCTGCTCCCTGGGTATGCAGGGCAGG +
Preference number: 6 (lower is better)
Translates to: DPRGPLLWSHSE*PMSCSLGMQGR
Trigger: CCTGCCCTGCATACCCAGGGAGCAGCTCATGGGCCATTCAGAATGGGACCACAAGAGAGGGCCACGAGGATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp GGCCATGGGCCTCACCCATCACAGCAATATCCACAGTaGTGCTGGTTCCTGACTGGGATCCTCGTGGCCCTC +
Preference number: 6 (lower is better)
Translates to: GHGPHPSQQYPQ*CWFLTGILVAL
Trigger: GAGGGCCACGAGGATCCCAGTCAGGAACCAGCATCACTGTGGATATTGCTGTGATGGGTGAGGCCCATGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp CTGGTTCCTGACTGGGATCCTCGTGGCCCTCTCTTGTaGTCCCATTCTGAATGGCCCATGAGCTGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: LVPDWDPRGPLL*SHSEWPMSCSL
Trigger: CAGGGAGCAGCTCATGGGCCATTCAGAATGGGACCACAAGAGAGGGCCACGAGGATCCCAGTCAGGAACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp GTCACGGTGGGGTTCACTCTGGGCTTGTGGATGGCCTaGAAGGTGAGCTGGGTGCTGAGCAAGTTGCTTACG +
Preference number: 6 (lower is better)
Translates to: VTVGFTLGLWMA*KVSWVLSKLLT
Trigger: CGTAAGCAACTTGCTCAGCACCCAGCTCACCTTCCAGGCCATCCACAAGCCCAGAGTGAACCCCACCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 90 bp TCCACAGTGATGCTGGTTCCTGACTGGGATCCTCGTGGCCCTCTCTaGTGGTCCCATTCTGAATGGCCCATGAGCTGCTCCCTGGGTATG +
Preference number: 6 (lower is better)
Translates to: STVMLVPDWDPRGPL*WSHSEWPMSCSLGM
Trigger: CATACCCAGGGAGCAGCTCATGGGCCATTCAGAATGGGACCACAAGAGAGGGCCACGAGGATCCCAGTCAGGAACCAGCATCACTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 90 bp CTGGGCTTGTGGATGGCCTGGAAGGTGAGCTGGGTGCTGAGCAAGTaGCTTACGGCCCTCAAGGATGTACACACATTCGGGGGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: LGLWMAWKVSWVLSK*LTALKDVHTFGGRE
Trigger: TTCTCTGCCCCCGAATGTGTGTACATCCTTGAGGGCCGTAAGCAACTTGCTCAGCACCCAGCTCACCTTCCAGGCCATCCACAAGCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp CTCTTCCTCTTCCTCCTTGATAGCCTGGATCTGCTCTaGGGGATGCTGCAGAGGGACCTGGTCCAGGGACTG +
Preference number: 6 (lower is better)
Translates to: LFLFLLDSLDLL*GMLQRDLVQGL
Trigger: CAGTCCCTGGACCAGGTCCCTCTGCAGCATCCCTCAGAGCAGATCCAGGCTATCAAGGAGGAAGAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp GGCTGGCTTCTTCATCGCCCTGCTCATAAAACTCGCTaGCGATGCCCTCTGTCCACCGCAGGTGGAGTTCTT +
Preference number: 6 (lower is better)
Translates to: GWLLHRPAHKTR*RCPLSTAGGVL
Trigger: AAGAACTCCACCTGCGGTGGACAGAGGGCATCGCCAGCGAGTTTTATGAGCAGGGCGATGAAGAAGCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp GAGTCGTCAACCCTGGGGCATTCCAAGAGTCAGGATTaGCAGCACTGGGTGAAGGGGCTTCGTGCGGCTTTA +
Preference number: 6 (lower is better)
Translates to: ESSTLGHSKSQD*QHWVKGLRAAL
Trigger: TAAAGCCGCACGAAGCCCCTTCACCCAGTGCTGTCAATCCTGACTCTTGGAATGCCCCAGGGTTGACGACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 72 bp AGAGTCGTCAACCCTGGGGCATTCCAAGAGTCAGGATaGACAGCACTGGGTGAAGGGGCTTCGTGCGGCTTT +
Preference number: 6 (lower is better)
Translates to: RVVNPGAFQESG*TALGEGASCGF
Trigger: AAAGCCGCACGAAGCCCCTTCACCCAGTGCTGTCAATCCTGACTCTTGGAATGCCCCAGGGTTGACGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 72 bp CTGGCGATGCCCTCTGTCCACCGCAGGTGGAGTTCTTaGCATTTAGCAGGCCCGTTGATGTCAGCCAGCTTT +
Preference number: 6 (lower is better)
Translates to: LAMPSVHRRWSS*HLAGPLMSASF
Trigger: AAAGCTGGCTGACATCAACGGGCCTGCTAAATGCAAAGAACTCCACCTGCGGTGGACAGAGGGCATCGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 90 bp TTGATGGTTACTTCAGGGGATTCTGGGAACTGTTGTGAAGCACTGTaGCTGACAGGACTGCTGGCAGGTGATCCCTGGGGAGGCGAGGAG +
Preference number: 6 (lower is better)
Translates to: LMVTSGDSGNCCEAL*LTGLLAGDPWGGEE
Trigger: CTCCTCGCCTCCCCAGGGATCACCTGCCAGCAGTCCTGTCAGCAACAGTGCTTCACAACAGTTCCCAGAATCCCCTGAAGTAACCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp GTGTGTAAATCCACTGTCAGAATCGGAGTCGCTTGCTaGGCCGTGATCACCAATCACACTTGGGAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: VCKSTVRIGVAC*AVITNHTWEAR
Trigger: CCTGGCCTCCCAAGTGTGATTGGTGATCACGGCTCAGCAAGCGACTCCGATTCTGACAGTGGATTTACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp TCTGAGGGATGCTGCAGAGGGACCTGGTCCAGGGACTaGTTCTCTGTGCCTGATAAACACTGTTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: SEGCCRGTWSRD*FSVPDKHCSSS
Trigger: TGAAGAGGAACAGTGTTTATCAGGCACAGAGAACCAGTCCCTGGACCAGGTCCCTCTGCAGCATCCCTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp AGAGTCATAGGAGTGGCAGAGAGGACCCACGATGTGTaGGATAAAGGATTCCTGAAGATTGGCCAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: RVIGVAERTHDV*DKGFLKIGQLR
Trigger: CCGCAGCTGGCCAATCTTCAGGAATCCTTTATCTCACACATCGTGGGTCCTCTCTGCCACTCCTATGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp CGGAATCATCACTGTCATCTACCCATTTTCCTGGCATaGGTCCCGCAGAGTCATAGGAGTGGCAGAGAGGAC +
Preference number: 6 (lower is better)
Translates to: RNHHCHLPIFLA*VPQSHRSGRED
Trigger: GTCCTCTCTGCCACTCCTATGACTCTGCGGGACTCATGCCAGGAAAATGGGTAGATGACAGTGATGATTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp AGTGAAGGATCTGCTTTTGGTGAGAGTCGTCAACCCTaGGGCATTCCAAGAGTCAGGATTGACAGCACTGGG +
Preference number: 6 (lower is better)
Translates to: SEGSAFGESRQP*GIPRVRIDSTG
Trigger: CCCAGTGCTGTCAATCCTGACTCTTGGAATGCCCCAGGGTTGACGACTCTCACCAAAAGCAGATCCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp GTGCCACAAGCCGATGCTTTCCTCTGGGGTTCTCTCTaGCACTCAGCTTCCTCTTCATTCTGCAGAATGTCA +
Preference number: 6 (lower is better)
Translates to: VPQADAFLWGSL*HSASSSFCRMS
Trigger: TGACATTCTGCAGAATGAAGAGGAAGCTGAGTGCCAGAGAGAACCCCAGAGGAAAGCATCGGCTTGTGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp GTCTCCGGAATCATCACTGTCATCTACCCATTTTCCTaGCATGAGTCCCGCAGAGTCATAGGAGTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: VSGIITVIYPFS*HESRRVIGVAE
Trigger: CTCTGCCACTCCTATGACTCTGCGGGACTCATGCCAGGAAAATGGGTAGATGACAGTGATGATTCCGGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 72 bp CTCAGTAAGCCTGGAGGCAAACTTCTTCTCAGGCGCTaGGAAATGGCCTGCTTGTCTTTCTCCAAGCCTTCC +
Preference number: 6 (lower is better)
Translates to: LSKPGGKLLLRR*EMACLSFSKPS
Trigger: GGAAGGCTTGGAGAAAGACAAGCAGGCCATTTCCAAGCGCCTGAGAAGAAGTTTGCCTCCAGGCTTACTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp GCAGGCCCGTTGATGTCAGCCAGCTTTATACACATCTaGCACACCAGGAGACGGTCGTTTTCATTGGTCCAA +
Preference number: 6 (lower is better)
Translates to: AGPLMSASFIHI*HTRRRSFSLVQ
Trigger: TTGGACCAATGAAAACGACCGTCTCCTGGTGTGTCAGATGTGTATAAAGCTGGCTGACATCAACGGGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 72 bp GTTTGTCCAGGAAGATCATGGTCTGGGAAGTATAGGTaGCACAAGCCGATGCTTTCCTCTGGGGTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: VCPGRSWSGKYR*HKPMLSSGVLS
Trigger: AGAGAGAACCCCAGAGGAAAGCATCGGCTTGTGGCACCTATACTTCCCAGACCATGATCTTCCTGGACAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 72 bp GCTGCAGAGGGACCTGGTCCAGGGACTGGTTCTCTGTaGCTGATAAACACTGTTCCTCTTCAATCACTTTCT +
Preference number: 6 (lower is better)
Translates to: AAEGPGPGTGSL*LINTVPLQSLS
Trigger: AGAAAGTGATTGAAGAGGAACAGTGTTTATCAGGCACAGAGAACCAGTCCCTGGACCAGGTCCCTCTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp TCAGTAAGCCTGGAGGCAAACTTCTTCTCAGGCGCTTaGAAATGGCCTGCTTGTCTTTCTCCAAGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: SVSLEANFFSGA*KWPACLSPSLP
Trigger: AGGAAGGCTTGGAGAAAGACAAGCAGGCCATTTCCAAGCGCCTGAGAAGAAGTTTGCCTCCAGGCTTACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp CTTGAGAAGTGTCATCTGTTCTGTTTGGTTTCAGCATaGCTGGGCCACTTCTCTCTGAGGGTCCATCAGCAG +
Preference number: 6 (lower is better)
Translates to: LEKCHLFCLVSA*LGHFSLRVHQQ
Trigger: CTGCTGATGGACCCTCAGAGAGAAGTGGCCCAGCCATGCTGAAACCAAACAGAACAGATGACACTTCTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS GCA 72 bp GGCACTCAGCTTCCTCTTCATTCTGCAGAATGTCACTaGTGTCACTGTTGTTGTTGGTCTCATAATCGGAGG +
Preference number: 6 (lower is better)
Translates to: GTQLPLHSAECH*CHCCCWSHNRR
Trigger: CCTCCGATTATGAGACCAACAACAACAGTGACAGCAGTGACATTCTGCAGAATGAAGAGGAAGCTGAGTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 90 bp GTCACTGCTGTCACTGTTGTTGTTGGTCTCATAATCGGAGGTAACTaGAGAAGTGTCATCTGTTCTGTTTGGTTTCAGCATGGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: VTAVTVVVGLIIGGN*RSVICSVWFQHGWA
Trigger: GGCCCAGCCATGCTGAAACCAAACAGAACAGATGACACTTCTCAAGTTACCTCCGATTATGAGACCAACAACAACAGTGACAGCAGTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp CAGGTTATCCATGACCAGGGGTTCTGGAGCAAGAATTaGTTTGTCCAGGAAGATCATGGTCTGGGAAGTATA +
Preference number: 6 (lower is better)
Translates to: QVIHDQGFWSKN*FVQEDHGLGSI
Trigger: TATACTTCCCAGACCATGATCTTCCTGGACAAACCAATTCTTGCTCCAGAACCCCTGGTCATGGATAACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CCA 72 bp TACACATCTGACACACCAGGAGACGGTCGTTTTCATTaGTCCAATCTATCCCGACATCATCGTTTACCTTGG +
Preference number: 6 (lower is better)
Translates to: YTSDTPGDGRFH*SNLSRHHRLPW
Trigger: CCAAGGTAAACGATGATGTCGGGATAGATTGGACCAATGAAAACGACCGTCTCCTGGTGTGTCAGATGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp AGCTTTTACATGGTTAGCTGCAGAGACAGCATAGGATaGAGTGAAGGATCTGCTTTTGGTGAGAGTCGTCAA +
Preference number: 6 (lower is better)
Translates to: SFYMVSCRDSIG*SEGSAFGESRQ
Trigger: TTGACGACTCTCACCAAAAGCAGATCCTTCACTTCATCCTATGCTGTCTCTGCAGCTAACCATGTAAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS TCA 72 bp AATTGGAAAATTCCAGGTGTTCAACTGATCCATAATTaGGTCCAGGTTATCCATGACCAGGGGTTCTGGAGC +
Preference number: 6 (lower is better)
Translates to: NWKIPGVQLIHN*VQVIHDQGFWS
Trigger: GCTCCAGAACCCCTGGTCATGGATAACCTGGACTCAATTATGGATCAGTTGAACACCTGGAATTTTCCAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10
CDS CAA 72 bp GTCACTGTTGTTGTTGGTCTCATAATCGGAGGTAACTaGAGAAGTGTCATCTGTTCTGTTTGGTTTCAGCAT +
Preference number: 6 (lower is better)
Translates to: VTVVVGLIIGGN*RSVICSVWFQH
Trigger: ATGCTGAAACCAAACAGAACAGATGACACTTCTCAAGTTACCTCCGATTATGAGACCAACAACAACAGTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000043259.10