Pregenerated sensors for PDE1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022489Ensembl transcript IDs: ENSMUST00000023132.5, ENSMUST00000226468.2, ENSMUST00000226493.2, ENSMUST00000227955.2
Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | AGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTaGTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACCCACCAGG | + |
Preference number: 1 (lower is better) Translates to: RKRLYLAALALGAPS*YRPEPLPICLPPTR Trigger: CCTGGTGGGTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CCA 90 bp | CTTCCCATGCAGGGCTTTGAAAACTGCCAGCTTCCTATCCTATTCTaGCCCTTTCTCAGGGAAGAGAAGGGAAACCCAGACCTGCCAGCT | + |
Preference number: 1 (lower is better) Translates to: LPMQGFENCQLPILF*PFLREEKGNPDLPA Trigger: AGCTGGCAGGTCTGGGTTTCCCTTCTCTTCCCTGAGAAAGGGCCAGAATAGGATAGGAAGCTGGCAGTTTTCAAAGCCCTGCATGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CCA 90 bp | ACCACATCAGGGTTGGGGTCTCCTACGTCCACATCTAAAGAAGGCTaGCGCCACTGGAAGCTAGGAATAAGACCCCATACACACACCCAA | + |
Preference number: 1 (lower is better) Translates to: TTSGLGSPTSTSKEG*RHWKLGIRPHTHTQ Trigger: TTGGGTGTGTGTATGGGGTCTTATTCCTAGCTTCCAGTGGCGCCAGCCTTCTTTAGATGTGGACGTAGGAGACCCCAACCCTGATGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR CCA 90 bp | TGCAGCCAGCACCACCAAGCTACCCAGATCTCTAGGGGCACCATTTaGAGACAGTTAGAGAATACAAGGGGTCCAACCGTGATGTGCACA | + |
Preference number: 1 (lower is better) Translates to: CSQHHQATQISRGTI*RQLENTRGPTVMCT Trigger: TGTGCACATCACGGTTGGACCCCTTGTATTCTCTAACTGTCTCCAAATGGTGCCCCTAGAGATCTGGGTAGCTTGGTGGTGCTGGCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR TCA 90 bp | CCCACAACCAACACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTaGTGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGG | + |
Preference number: 1 (lower is better) Translates to: PTTNTLPWSRWGNQS*WIVLMTSKTLDSVR Trigger: CCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTGTTGGTTGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR TCA 90 bp | CACTGTCTGGGCACAGGAGAGAGAGAATTTGCAAGGGAATGGGGCTaGAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACCTCAT | + |
Preference number: 1 (lower is better) Translates to: HCLGTGEREFAREWG*RSASMGSRGCPPPH Trigger: ATGAGGTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTGCAAATTCTCTCTCTCCTGTGCCCAGACAGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR TCA 90 bp | AGATCAGGGTACAAGCCCCTCAAGCCCAGACCATCCCCAAGTATTTaGGGACTCCAGGAAAGACTTCCCTCAGACAGAATCCCAATGGCT | + |
Preference number: 1 (lower is better) Translates to: RSGYKPLKPRPSPSI*GLQERLPSDRIPMA Trigger: AGCCATTGGGATTCTGTCTGAGGGAAGTCTTTCCTGGAGTCCTCAAATACTTGGGGATGGTCTGGGCTTGAGGGGCTTGTACCCTGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CCA 90 bp | GGGTTGGGGTCTCCTACGTCCACATCTAAAGAAGGCTGGCGCCACTaGAAGCTAGGAATAAGACCCCATACACACACCCAATTCCAGATA | + |
Preference number: 1 (lower is better) Translates to: GLGSPTSTSKEGWRH*KLGIRPHTHTQFQI Trigger: TATCTGGAATTGGGTGTGTGTATGGGGTCTTATTCCTAGCTTCCAGTGGCGCCAGCCTTCTTTAGATGTGGACGTAGGAGACCCCAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR CCA 90 bp | ATCCAGATTCCCATTCTGGTTGTGCTCATCTTCTGCAGGGGAGGATaGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTG | + |
Preference number: 1 (lower is better) Translates to: IQIPILVVLIFCRGG*GFFLTGGQFINGHL Trigger: CAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATCCTCCCCTGCAGAAGATGAGCACAACCAGAATGGGAATCTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR CCA 90 bp | GAGAGAGAGAATTTGCAAGGGAATGGGGCTGAAGAAGTGCAAGTATaGGATCAAGAGGATGTCCCCCACCTCATCTTAGGAAGGAACCTG | + |
Preference number: 1 (lower is better) Translates to: ERENLQGNGAEEVQV*DQEDVPHLILGRNL Trigger: CAGGTTCCTTCCTAAGATGAGGTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTGCAAATTCTCTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CCA 90 bp | GATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTaGTTGGTGATGCCTACAGAGGGTTCCAAGAAATCTGATATTAGG | + |
Preference number: 1 (lower is better) Translates to: DGASSSQGDSSSMDI*LVMPTEGSKKSDIR Trigger: CCTAATATCAGATTTCTTGGAACCCTCTGTAGGCATCACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR GCA 90 bp | CAACATTACTGGGTAATACTTCCCCCTGCTTGTACTGGGGCTAGCTaGTCTCTCCTTCCTTTGCTCATAAGATACATCCTGAAGGAAGAC | + |
Preference number: 1 (lower is better) Translates to: QHYWVILPPACTGAS*SLLPLLIRYILKED Trigger: GTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGAGAGCAGCTAGCCCCAGTACAAGCAGGGGGAAGTATTACCCAGTAATGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR GCA 90 bp | CAAGGAGTTTCCTGGGACTTAACAAGAAGGGGGTTGCTGTTGCTCTaGCAGTCAGTCCTAGAATGTTCACACACATGCATACACAATAGC | + |
Preference number: 1 (lower is better) Translates to: QGVSWDLTRRGLLLL*QSVLECSHTCIHNS Trigger: GCTATTGTGTATGCATGTGTGTGAACATTCTAGGACTGACTGGCAGAGCAACAGCAACCCCCTTCTTGTTAAGTCCCAGGAAACTCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR TCA 90 bp | CTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTaGTGCCTACAGAGGGTTCCAAGAAATCTGATATTAGGCCAAGAA | + |
Preference number: 1 (lower is better) Translates to: LLPHRGTVHQWTSGW*CLQRVPRNLILGQE Trigger: TTCTTGGCCTAATATCAGATTTCTTGGAACCCTCTGTAGGCATCACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR-3UTR CCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTTGGAGGCAAGAAGGATaGGGAGGGCCCAGGGGGCTG | + |
Preference number: 2 (lower is better) Translates to: LALGAPSCYRPEPLPICLWRQEG*GGPRGL Trigger: CAGCCCCCTGGGCCCTCCCCATCCTTCTTGCCTCCA...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAAGGGCACAGTGACCACTaGGGGCCTGTGGGTGGGGAG | + |
Preference number: 2 (lower is better) Translates to: EKGNPDLPAKIWGGGLREGHSDH*GPVGGE Trigger: CTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCC...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCGGGCACAGTGACCACTaGGGGCCTGTGGGTGGGGAG | + |
Preference number: 2 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLGHSDH*GPVGGE Trigger: CTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCC...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACAGACTTTGGACTCAGTaGGGACCTGGTCAGCCCCCA | + |
Preference number: 2 (lower is better) Translates to: LWVLQVATALSPSPSAFHRLWTQ*GPGQPP Trigger: TGGGGGCTGACCAGGTCCTCACTGAGTCCAAAGTCT...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCTGGAGGCAAGAAGGATaGGGAGGGCCCAGGGGGCTG | + |
Preference number: 2 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLWRQEG*GGPRGL Trigger: CAGCCCCCTGGGCCCTCCCCATCCTTCTTGCCTCCA...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCAAGGGATGGGCACAGTaGCCACTGAGGGCCTGTGGG | + |
Preference number: 2 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLKGWAQ*PLRACG Trigger: CCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTT...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | GGATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTGGGCACAGTGACCACTaGGGGCCTGTGGGTGGGGAG | + |
Preference number: 2 (lower is better) Translates to: GWGFFLTGGQFINGHLVGGHSDH*GPVGGE Trigger: CTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCC...ACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR-3UTR TCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTAAAGGGATGGGCACAGTaGCCACTGAGGGCCTGTGGG | + |
Preference number: 2 (lower is better) Translates to: GQEEALPGCTRSGCSKLLKGWAQ*PLRACG Trigger: CCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTT...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTGCAAGGGAATGGGGCTaGAGAAGTGCAAGTATGGGA | + |
Preference number: 2 (lower is better) Translates to: LALGAPSCYRPEPLPICLAREWG*RSASMG Trigger: TCCCATACTTGCACTTCTTCAGCCCCATTCCCTTGC...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAAGCTATAGCAGGGGCCTaGGAGACCAAGAGCATGGGG | + |
Preference number: 2 (lower is better) Translates to: EKGNPDLPAKIWGGGLREAIAGA*ETKSMG Trigger: CCCCATGCTCTTGGTCTCCCAGGCCCCTGCTATAGC...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACTCCCATGCAGGGCTTTaGAAACTGCCAGCTTCCTAT | + |
Preference number: 2 (lower is better) Translates to: LWVLQVATALSPSPSAFHSHAGL*KLPASY Trigger: ATAGGAAGCTGGCAGTTTTCAAAGCCCTGCATGGGA...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | AGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGATGGCATTTGGCTCTCAGGTaGGCTGTCTCTCCCACAACC | + |
Preference number: 2 (lower is better) Translates to: RELTPPKWPKEESRGKGWHLALR*AVSPTT Trigger: GGTTGTGGGAGAGACAGCTCACCTGAGAGCCAAATG...CCATCCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR GCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTAGGAGAGAGAGAATTTaGAAGGGAATGGGGCTGAAG | + |
Preference number: 2 (lower is better) Translates to: LALGAPSCYRPEPLPICLRRERI*KGMGLK Trigger: CTTCAGCCCCATTCCCTTGCAAATTCTCTCTCTCCT...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCACCAACACACTCCCTTaGAGCAGATGGGGGAACCAG | + |
Preference number: 2 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLTNTLP*SRWGNQ Trigger: CTGGTTCCCCCATCTGCTCCAAGGGAGTGTGTTGGT...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTATGGCTGCACTCGCTCTaGGTGCTCCAAGTTGCTACC | + |
Preference number: 2 (lower is better) Translates to: GQEEALPGCTRSGCSKLLWLHSL*VLQVAT Trigger: GGTAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCA...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTAGGGAGACCAAGAGCATaGGGGAGTCACATGCGGTTC | + |
Preference number: 2 (lower is better) Translates to: GQEEALPGCTRSGCSKLLGRPRA*GSHMRF Trigger: GAACCGCATGTGACTCCCCCATGCTCTTGGTCTCCC...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | CCTCATCTTAGGAAGGAACCTGAAGGGACACCTGCCCTTCCCATGCAGGGCTTTAGACTTTGGACTCAGTaGGGACCTGGTCAGCCCCCA | + |
Preference number: 2 (lower is better) Translates to: PHLRKEPEGTPALPMQGFRLWTQ*GPGQPP Trigger: TGGGGGCTGACCAGGTCCTCACTGAGTCCAAAGTCT...AAAGCCCTGCATGGGAAGGGCAGGTGTCCCTTCAGGTTCCTTCCTAAGATGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCCTTACTCCTCCCAAGTaGCCAAAGGAGGAGTCCAGA | + |
Preference number: 2 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLLTPPK*PKEESR Trigger: TCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAG...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCTGGAGGCAAGAAGGATaGGGAGGGCCCAGGGGGCTG | + |
Preference number: 2 (lower is better) Translates to: WIVLMTSKTLDSVRTWSAWRQEG*GGPRGL Trigger: CAGCCCCCTGGGCCCTCCCCATCCTTCTTGCCTCCA...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | CCTCATCTTAGGAAGGAACCTGAAGGGACACCTGCCCTTCCCATGCAGGGCTTTCTGCCAGCTAAGATCTaGGGTGGGGGACTGAGGGAA | + |
Preference number: 2 (lower is better) Translates to: PHLRKEPEGTPALPMQGFLPAKI*GGGLRE Trigger: TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAG...AAAGCCCTGCATGGGAAGGGCAGGTGTCCCTTCAGGTTCCTTCCTAAGATGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | GACTTTGGACTCAGTGAGGACCTGGTCAGCCCCCAGTTCCCTAATCCAGATTCCTTCTGCAGGGGAGGATaGGGCTTCTTCCTCACAGGG | + |
Preference number: 2 (lower is better) Translates to: DFGLSEDLVSPQFPNPDSFCRGG*GFFLTG Trigger: CCCTGTGAGGAAGAAGCCCCATCCTCCCCTGCAGAA...GGAATCTGGATTAGGGAACTGGGGGCTGACCAGGTCCTCACTGAGTCCAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR-3UTR TCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCTGGGGGAACCAGTCCTaGTGGATAGTGCTAATGACA | + |
Preference number: 2 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLWGNQS*WIVLMT Trigger: TGTCATTAGCACTATCCATCAGGACTGGTTCCCCCA...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR TCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTATGGACATCTGGTTGGTaGTGCCTACAGAGGGTTCCA | + |
Preference number: 2 (lower is better) Translates to: GQEEALPGCTRSGCSKLLWTSGW*CLQRVP Trigger: TGGAACCCTCTGTAGGCATCACCAACCAGATGTCCA...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR-3UTR GCA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAAGAGGCAGGAAGGACCTaGTCTGTGTCAACATTACTG | + |
Preference number: 2 (lower is better) Translates to: EKGNPDLPAKIWGGGLREEAGRT*SVSTLL Trigger: CAGTAATGTTGACACAGAGCAGGTCCTTCCTGCCTC...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACACCAACACACTCCCTTaGAGCAGATGGGGGAACCAG | + |
Preference number: 2 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHTNTLP*SRWGNQ Trigger: CTGGTTCCCCCATCTGCTCCAAGGGAGTGTGTTGGT...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACACCAACACACTCCCTTaGAGCAGATGGGGGAACCAG | + |
Preference number: 2 (lower is better) Translates to: HTPLEQMGEPVLMDSANDTNTLP*SRWGNQ Trigger: CTGGTTCCCCCATCTGCTCCAAGGGAGTGTGTTGGT...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CAA 90 bp | TTTGGCTCTCAGGTGAGCTGTCTCTCCCACAACCAACACACTCCCTaGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGAC | + |
Preference number: 2 (lower is better) Translates to: FGSQVSCLSHNQHTP*EQMGEPVLMDSAND Trigger: GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTGTTGGTTGTGGGAGAGACAGCTCACCTGAGAGCCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CAA 90 bp | TCCTCTCCTCTCCCAGCCACTGTCTGGGCACAGGAGAGAGAGAATTaGCAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAG | + |
Preference number: 2 (lower is better) Translates to: SSPLPATVWAQEREN*QGNGAEEVQVWDQE Trigger: CTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTGCAAATTCTCTCTCTCCTGTGCCCAGACAGTGGCTGGGAGAGGAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CAA 90 bp | ACAAATGCATGTATTTACAAGAGAGGAGGAGGCAGTCACCTGGACTaGGCCTTAAATGGGGTGACGTGGGGCAAGGAGCCTGAGGACAGG | + |
Preference number: 2 (lower is better) Translates to: TNACIYKRGGGSHLD*ALNGVTWGKEPEDR Trigger: CCTGTCCTCAGGCTCCTTGCCCCACGTCACCCCATTTAAGGCCAAGTCCAGGTGACTGCCTCCTCCTCTCTTGTAAATACATGCATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CAA 90 bp | GCACCCACCACTTGCTGCCCGTTCCTTCCACTTCTGTTTGTTCTCTaGAATGTACTTGGTCCAGGTGGCACGGAAACTGACCACATCAGG | + |
Preference number: 2 (lower is better) Translates to: APTTCCPFLPLLFVL*NVLGPGGTETDHIR Trigger: CCTGATGTGGTCAGTTTCCGTGCCACCTGGACCAAGTACATTCAAGAGAACAAACAGAAGTGGAAGGAACGGGCAGCAAGTGGTGGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR TCA 90 bp | GATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTGGCAAGGGAATGGGGCTaGAGAAGTGCAAGTATGGGA | + |
Preference number: 2 (lower is better) Translates to: DGASSSQGDSSSMDIWLVAREWG*RSASMG Trigger: TCCCATACTTGCACTTCTTCAGCCCCATTCCCTTGC...CACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR TCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCCAGACATTGGTCGGATaGGGGCTTCCTAGTTCCCGG | + |
Preference number: 2 (lower is better) Translates to: WIVLMTSKTLDSVRTWSAQTLVG*GLPSSR Trigger: CCGGGAACTAGGAAGCCCTCATCCGACCAATGTCTG...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR-3UTR TCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACCCCCTCTGCATTCAATaGGCCAGGACACATGGTTAC | + |
Preference number: 2 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHPLCIQ*ARTHGY Trigger: GTAACCATGTGTCCTGGCTCATTGAATGCAGAGGGG...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR CCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACCTTACTCCTCCCAAGTaGCCAAAGGAGGAGTCCAGA | + |
Preference number: 2 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHLTPPK*PKEESR Trigger: TCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAG...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR CAA 90 bp | AACTCCAGGAGCCAAGGAGTTTCCTGGGACTTAACAAGAAGGGGGTaGCTGTTGCTCTGCCAGTCAGTCCTAGAATGTTCACACACATGC | + |
Preference number: 2 (lower is better) Translates to: NSRSQGVSWDLTRRG*LLLCQSVLECSHTC Trigger: GCATGTGTGTGAACATTCTAGGACTGACTGGCAGAGCAACAGCAACCCCCTTCTTGTTAAGTCCCAGGAAACTCCTTGGCTCCTGGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR TCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCGCAAGGGAATGGGGCTaGAGAAGTGCAAGTATGGGA | + |
Preference number: 2 (lower is better) Translates to: WIVLMTSKTLDSVRTWSAAREWG*RSASMG Trigger: TCCCATACTTGCACTTCTTCAGCCCCATTCCCTTGC...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR CAA 90 bp | AGGAGCCAAGGAGTTTCCTGGGACTTAACAAGAAGGGGGTTGCTGTaGCTCTGCCAGTCAGTCCTAGAATGTTCACACACATGCATACAC | + |
Preference number: 2 (lower is better) Translates to: RSQGVSWDLTRRGLL*LCQSVLECSHTCIH Trigger: GTGTATGCATGTGTGTGAACATTCTAGGACTGACTGGCAGAGCAACAGCAACCCCCTTCTTGTTAAGTCCCAGGAAACTCCTTGGCTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR CAA 90 bp | GGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTaGGTGATGCCTACAGAGGGTTCCAAGAAATCTGATATTAGGCCA | + |
Preference number: 2 (lower is better) Translates to: GASSSQGDSSSMDIW*VMPTEGSKKSDIRP Trigger: TGGCCTAATATCAGATTTCTTGGAACCCTCTGTAGGCATCACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR CAA 90 bp | ATACTTCCCCCTGCTTGTACTGGGGCTAGCTGCTCTCTCCTTCCTTaGCTCATAAGATACATCCTGAAGGAAGACCTCAGAGCGTTTACA | + |
Preference number: 2 (lower is better) Translates to: ILPPACTGASCSLLP*LIRYILKEDLRAFT Trigger: TGTAAACGCTCTGAGGTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGAGAGCAGCTAGCCCCAGTACAAGCAGGGGGAAGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR-3UTR TCA 90 bp | GGATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTAGATCAATAAAAGGCTaGGGGGTCAGAGTTCTCTTT | + |
Preference number: 2 (lower is better) Translates to: GWGFFLTGGQFINGHLVGRSIKG*GVRVLF Trigger: AAAGAGAACTCTGACCCCTCAGCCTTTTATTGATCT...ACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR GCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCATGGGGCTGAAGAAGTaGAAGTATGGGATCAAGAGG | + |
Preference number: 2 (lower is better) Translates to: WIVLMTSKTLDSVRTWSAMGLKK*KYGIKR Trigger: CCTCTTGATCCCATACTTGCACTTCTTCAGCCCCAT...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR-3UTR GCA 90 bp | GCTCTCGTTCTAGAGCAGCCCAAGTCATTCAGACAGCCTTTCCTGTGGCTTCCTGAATGTTCACACACATaGATACACAATAGCACCCAC | + |
Preference number: 2 (lower is better) Translates to: ALVLEQPKSFRQPFLWLPECSHT*IHNSTH Trigger: GTGGGTGCTATTGTGTATGCATGTGTGTGAACATTC...AGGAAGCCACAGGAAAGGCTGTCTGAATGACTTGGGCTGCTCTAGAACGAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR CCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACTATTGCTTAGAAACTTaGAGGCAAGAAGGATGGGGA | + |
Preference number: 2 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHYCLET*RQEGWG Trigger: TCCCCATCCTTCTTGCCTCCAAGTTTCTAAGCAATA...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR-3UTR CCA 90 bp | GGATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTTCTAGGGGCACCATTTaGAGACAGTTAGAGAATACA | + |
Preference number: 2 (lower is better) Translates to: GWGFFLTGGQFINGHLVGSRGTI*RQLENT Trigger: TGTATTCTCTAACTGTCTCCAAATGGTGCCCCTAGA...ACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR TCA 90 bp | GTTCTAGAGCAGCCCAAGTCATTCAGACAGCCTTTCCTGTGGCTTCCTATTTTATGGGGGAACCAGTCCTaGTGGATAGTGCTAATGACA | + |
Preference number: 2 (lower is better) Translates to: VLEQPKSFRQPFLWLPILWGNQS*WIVLMT Trigger: TGTCATTAGCACTATCCATCAGGACTGGTTCCCCCA...TAAAATAGGAAGCCACAGGAAAGGCTGTCTGAATGACTTGGGCTGCTCTAGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR-3UTR GCA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACACCCCCAAAATGTATTaGTTAGAAACTTGGAGGCAA | + |
Preference number: 2 (lower is better) Translates to: HTPLEQMGEPVLMDSANDTPKMY*LETWRQ Trigger: TTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGT...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR-3UTR GCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACACCCCCAAAATGTATTaGTTAGAAACTTGGAGGCAA | + |
Preference number: 2 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHTPKMY*LETWRQ Trigger: TTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGT...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCTCCAGATTCCCATTCTaGTTGTGCTCATCTTCTGCA | + |
Preference number: 2 (lower is better) Translates to: WIVLMTSKTLDSVRTWSASRFPF*LCSSSA Trigger: TGCAGAAGATGAGCACAACCAGAATGGGAATCTGGA...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR-3UTR GCA 90 bp | AGAACCAAAGGTGTATGTGAAGAAAATAAGAGGACTGACCCTCATCTACCACCTGGGTTGCTGTTGCTCTaGCAGTCAGTCCTAGAATGT | + |
Preference number: 2 (lower is better) Translates to: RTKGVCEENKRTDPHLPPGLLLL*QSVLEC Trigger: ACATTCTAGGACTGACTGGCAGAGCAACAGCAACCC...AGGTGGTAGATGAGGGTCAGTCCTCTTATTTTCTTCACATACACCTTTGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR GCA 72 bp | CTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTaGTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCA | + |
Preference number: 3 (lower is better) Translates to: LYLAALALGAPS*YRPEPLPICLP Trigger: TGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CCA 72 bp | AGGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTaGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCC | + |
Preference number: 3 (lower is better) Translates to: RTGRGFTWLHSL*VLQVATALSPS Trigger: GGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CAA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACAACCAACACACTCCCTaGGAGCAGATGGGGGAACCA | + |
Preference number: 3 (lower is better) Translates to: LWVLQVATALSPSPSAFHNQHTP*EQMGEP Trigger: TGGTTCCCCCATCTGCTCCAAGGGAGTGTGTTGGTT...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CCA 72 bp | GGGGCAAGGAGCCTGAGGACAGGAAGAGGCTTTACCTaGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTACC | + |
Preference number: 3 (lower is better) Translates to: GARSLRTGRGFT*LHSLWVLQVAT Trigger: GGTAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCCTCAGGCTCCTTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR TCA 72 bp | CCCACACCCCACCCGCTCCAACATTTGGCTCTCAGGTaGGCTGTCTCTCCCACAACCAACACACTCCCTTGG | + |
Preference number: 3 (lower is better) Translates to: PTPHPLQHLALR*AVSPTTNTLPW Trigger: CCAAGGGAGTGTGTTGGTTGTGGGAGAGACAGCTCACCTGAGAGCCAAATGTTGGAGCGGGTGGGGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR-3UTR CAA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACGTATTGCTTAGAAACTaGGAGGCAAGAAGGATGGGG | + |
Preference number: 3 (lower is better) Translates to: LWVLQVATALSPSPSAFHVLLRN*EARRMG Trigger: CCCCATCCTTCTTGCCTCCAAGTTTCTAAGCAATAC...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR GCA 72 bp | CTTCCCACATGGAACACTCACAGCCCCCGCACACATTaGAGCCAGCACCACCAAGCTACCCAGATCTCTAGG | + |
Preference number: 3 (lower is better) Translates to: LPTWNTHSPRTH*SQHHQATQISR Trigger: CCTAGAGATCTGGGTAGCTTGGTGGTGCTGGCTGCAATGTGTGCGGGGGCTGTGAGTGTTCCATGTGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR-3UTR CAA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACTGCTCTCTCCTTCCTTaGCTCATAAGATACATCCTG | + |
Preference number: 3 (lower is better) Translates to: LWVLQVATALSPSPSAFHCSLLP*LIRYIL Trigger: CAGGATGTATCTTATGAGCAAAGGAAGGAGAGAGCA...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR GCA 72 bp | TGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTaGTCTGTGTCAACATTACTGGGTAATACTTCCCCC | + |
Preference number: 3 (lower is better) Translates to: WASSGRREAGRT*SVSTLLGNTSP Trigger: GGGGGAAGTATTACCCAGTAATGTTGACACAGAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CAA 90 bp | GGCATCTCTGACCCTCCCCTCCAAACTGTAGGAAGCCTGCAGGGAGCTTACTCCATGACATCGAAGACTTaGGACTCAGTGAGGACCTGG | + |
Preference number: 3 (lower is better) Translates to: GISDPPLQTVGSLQGAYSMTSKT*DSVRTW Trigger: CCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCAT...GGAGTAAGCTCCCTGCAGGCTTCCTACAGTTTGGAGGGGAGGGTCAGAGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CAA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCCAGGAGAGAGAGAATTaGCAAGGGAATGGGGCTGAA | + |
Preference number: 3 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLQEREN*QGNGAE Trigger: TTCAGCCCCATTCCCTTGCAAATTCTCTCTCTCCTG...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CAA 90 bp | GCTCTCGTTCTAGAGCAGCCCAAGTCATTCAGACAGCCTTTCCTGTGGCTTCCTAACAGCACCCACCACTaGCTGCCCGTTCCTTCCACT | + |
Preference number: 3 (lower is better) Translates to: ALVLEQPKSFRQPFLWLPNSTHH*LPVPST Trigger: AGTGGAAGGAACGGGCAGCAAGTGGTGGGTGCTGTT...AGGAAGCCACAGGAAAGGCTGTCTGAATGACTTGGGCTGCTCTAGAACGAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR CCA 72 bp | GGGAGGCAGGAAGGACCTGCTCTGTGTCAACATTACTaGGTAATACTTCCCCCTGCTTGTACTGGGGCTAGC | + |
Preference number: 3 (lower is better) Translates to: GRQEGPALCQHY*VILPPACTGAS Trigger: GCTAGCCCCAGTACAAGCAGGGGGAAGTATTACCCAGTAATGTTGACACAGAGCAGGTCCTTCCTGCCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CAA 90 bp | TCCCGGGGACAGGAAGGAGGCAAAGGGTCAAAAACCCATCTAGATCAGGGTACAAACCAACACACTCCCTaGGAGCAGATGGGGGAACCA | + |
Preference number: 3 (lower is better) Translates to: SRGQEGGKGSKTHLDQGTNQHTP*EQMGEP Trigger: TGGTTCCCCCATCTGCTCCAAGGGAGTGTGTTGGTT...TGTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR-3UTR CAA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTATTCCCATGCAGGGCTTaGAAAACTGCCAGCTTCCTA | + |
Preference number: 3 (lower is better) Translates to: GQEEALPGCTRSGCSKLLFPCRA*KTASFL Trigger: TAGGAAGCTGGCAGTTTTCAAAGCCCTGCATGGGAA...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR CCA 72 bp | GGGTTGGGGTCTCCTACGTCCACATCTAAAGAAGGCTaGCGCCACTGGAAGCTAGGAATAAGACCCCATACA | + |
Preference number: 3 (lower is better) Translates to: GLGSPTSTSKEG*RHWKLGIRPHT Trigger: TGTATGGGGTCTTATTCCTAGCTTCCAGTGGCGCCAGCCTTCTTTAGATGTGGACGTAGGAGACCCCAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR CCA 72 bp | GGTTCCATTCCCAACTCCAGGAGCCAAGGAGTTTCCTaGGACTTAACAAGAAGGGGGTTGCTGTTGCTCTGC | + |
Preference number: 3 (lower is better) Translates to: GSIPNSRSQGVS*DLTRRGLLLLC Trigger: GCAGAGCAACAGCAACCCCCTTCTTGTTAAGTCCCAGGAAACTCCTTGGCTCCTGGAGTTGGGAATGGAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR CCA 72 bp | CCCATTCTGGTTGTGCTCATCTTCTGCAGGGGAGGATaGGGCTTCTTCCTCACAGGGGGACAGTTCATCAAT | + |
Preference number: 3 (lower is better) Translates to: PILVVLIFCRGG*GFFLTGGQFIN Trigger: ATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATCCTCCCCTGCAGAAGATGAGCACAACCAGAATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR CCA 72 bp | CACCACCAAGCTACCCAGATCTCTAGGGGCACCATTTaGAGACAGTTAGAGAATACAAGGGGTCCAACCGTG | + |
Preference number: 3 (lower is better) Translates to: HHQATQISRGTI*RQLENTRGPTV Trigger: CACGGTTGGACCCCTTGTATTCTCTAACTGTCTCCAAATGGTGCCCCTAGAGATCTGGGTAGCTTGGTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR CAA 90 bp | TCCCGGGGACAGGAAGGAGGCAAAGGGTCAAAAACCCATCTAGATCAGGGTACATTCCCATGCAGGGCTTaGAAAACTGCCAGCTTCCTA | + |
Preference number: 3 (lower is better) Translates to: SRGQEGGKGSKTHLDQGTFPCRA*KTASFL Trigger: TAGGAAGCTGGCAGTTTTCAAAGCCCTGCATGGGAA...TGTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR-3UTR CAA 90 bp | GACTTTGGACTCAGTGAGGACCTGGTCAGCCCCCAGTTCCCTAATCCAGATTCCATACCCCCAAAATCCTaGTCTCTCTTCCCACAACTG | + |
Preference number: 3 (lower is better) Translates to: DFGLSEDLVSPQFPNPDSIPPKS*SLFPQL Trigger: CAGTTGTGGGAAGAGAGACAAGGATTTTGGGGGTAT...GGAATCTGGATTAGGGAACTGGGGGCTGACCAGGTCCTCACTGAGTCCAAAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR CAA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACTCAATGGACATCTGGTaGGTGATGCCTACAGAGGGT | + |
Preference number: 3 (lower is better) Translates to: HTPLEQMGEPVLMDSANDSMDIW*VMPTEG Trigger: ACCCTCTGTAGGCATCACCAACCAGATGTCCATTGA...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR TCA 72 bp | GGCACAGGAGAGAGAGAATTTGCAAGGGAATGGGGCTaGAGAAGTGCAAGTATGGGATCAAGAGGATGTCCC | + |
Preference number: 3 (lower is better) Translates to: GTGEREFAREWG*RSASMGSRGCP Trigger: GGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTGCAAATTCTCTCTCTCCTGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR GCA 72 bp | TTAGGAAGGAACCTGAAGGGACACCTGCCCTTCCCATaGAGGGCTTTGAAAACTGCCAGCTTCCTATCCTAT | + |
Preference number: 3 (lower is better) Translates to: LGRNLKGHLPFP*RALKTASFLSY Trigger: ATAGGATAGGAAGCTGGCAGTTTTCAAAGCCCTGCATGGGAAGGGCAGGTGTCCCTTCAGGTTCCTTCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR CCA 72 bp | CAGGGCTTTGAAAACTGCCAGCTTCCTATCCTATTCTaGCCCTTTCTCAGGGAAGAGAAGGGAAACCCAGAC | + |
Preference number: 3 (lower is better) Translates to: QGFENCQLPILF*PFLREEKGNPD Trigger: GTCTGGGTTTCCCTTCTCTTCCCTGAGAAAGGGCCAGAATAGGATAGGAAGCTGGCAGTTTTCAAAGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR CCA 72 bp | TCTCCTACGTCCACATCTAAAGAAGGCTGGCGCCACTaGAAGCTAGGAATAAGACCCCATACACACACCCAA | + |
Preference number: 3 (lower is better) Translates to: SPTSTSKEGWRH*KLGIRPHTHTQ Trigger: TTGGGTGTGTGTATGGGGTCTTATTCCTAGCTTCCAGTGGCGCCAGCCTTCTTTAGATGTGGACGTAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR-3UTR CAA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCATGACATCGAAGACTTaGGACTCAGTGAGGACCTGG | + |
Preference number: 3 (lower is better) Translates to: WIVLMTSKTLDSVRTWSAMTSKT*DSVRTW Trigger: CCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCAT...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR-3UTR CAA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCCAGGAGAGAGAGAATTaGCAAGGGAATGGGGCTGAA | + |
Preference number: 3 (lower is better) Translates to: WIVLMTSKTLDSVRTWSAQEREN*QGNGAE Trigger: TTCAGCCCCATTCCCTTGCAAATTCTCTCTCTCCTG...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR-3UTR CAA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACTGCTCTCTCCTTCCTTaGCTCATAAGATACATCCTG | + |
Preference number: 3 (lower is better) Translates to: HTPLEQMGEPVLMDSANDCSLLP*LIRYIL Trigger: CAGGATGTATCTTATGAGCAAAGGAAGGAGAGAGCA...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR TCA 72 bp | AACACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTaGTGGATAGTGCTAATGACATCGAAGACTTTGGAC | + |
Preference number: 3 (lower is better) Translates to: NTLPWSRWGNQS*WIVLMTSKTLD Trigger: GTCCAAAGTCTTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR GCA 72 bp | TGGGTAATACTTCCCCCTGCTTGTACTGGGGCTAGCTaGTCTCTCCTTCCTTTGCTCATAAGATACATCCTG | + |
Preference number: 3 (lower is better) Translates to: WVILPPACTGAS*SLLPLLIRYIL Trigger: CAGGATGTATCTTATGAGCAAAGGAAGGAGAGAGCAGCTAGCCCCAGTACAAGCAGGGGGAAGTATTACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR GCA 72 bp | CTGCTTTGCCAGTCAGTCCTAGAATATTCACACACGTaGATACATAACAGCACCCACCACTTGCTGCCCGTT | + |
Preference number: 3 (lower is better) Translates to: LLCQSVLEYSHT*IHNSTHHLLPV Trigger: AACGGGCAGCAAGTGGTGGGTGCTGTTATGTATGCACGTGTGTGAATATTCTAGGACTGACTGGCAAAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR CCA 72 bp | CTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTaGTCAGCCCCCAGTTCCCTAATCCAGATTCCCATT | + |
Preference number: 3 (lower is better) Translates to: LMTSKTLDSVRT*SAPSSLIQIPI Trigger: AATGGGAATCTGGATTAGGGAACTGGGGGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR GCA 72 bp | TTGCTCTGCCAGTCAGTCCTAGAATGTTCACACACATaGATACACAATAGCACCCACTGCTTTGCCAGTCAG | + |
Preference number: 3 (lower is better) Translates to: LLCQSVLECSHT*IHNSTHCFASQ Trigger: CTGACTGGCAAAGCAGTGGGTGCTATTGTGTATGCATGTGTGTGAACATTCTAGGACTGACTGGCAGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR GCA 72 bp | TCCTGGGACTTAACAAGAAGGGGGTTGCTGTTGCTCTaGCAGTCAGTCCTAGAATGTTCACACACATGCATA | + |
Preference number: 3 (lower is better) Translates to: SWDLTRRGLLLL*QSVLECSHTCI Trigger: TATGCATGTGTGTGAACATTCTAGGACTGACTGGCAGAGCAACAGCAACCCCCTTCTTGTTAAGTCCCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR CCA 72 bp | TCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTaGTTGGTGATGCCTACAGAGGGTTCCAAGAAATCT | + |
Preference number: 3 (lower is better) Translates to: SSSQGDSSSMDI*LVMPTEGSKKS Trigger: AGATTTCTTGGAACCCTCTGTAGGCATCACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR-3UTR CAA 90 bp | AGAACCAAAGGTGTATGTGAAGAAAATAAGAGGACTGACCCTCATCTACCACCTCAGGAGAGAGAGAATTaGCAAGGGAATGGGGCTGAA | + |
Preference number: 3 (lower is better) Translates to: RTKGVCEENKRTDPHLPPQEREN*QGNGAE Trigger: TTCAGCCCCATTCCCTTGCAAATTCTCTCTCTCCTG...AGGTGGTAGATGAGGGTCAGTCCTCTTATTTTCTTCACATACACCTTTGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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3UTR-3UTR CAA 90 bp | TCTCCTTCCTTTGCTCATAAGATACATCCTGAAGGAAGACCTCAGAGCGTTTACATAGCACCCACTGCTTaGCCAGTCAGTCCTAGAATA | + |
Preference number: 3 (lower is better) Translates to: SPSFAHKIHPEGRPQSVYIAPTA*PVSPRI Trigger: TATTCTAGGACTGACTGGCAAAGCAGTGGGTGCTAT...GTAAACGCTCTGAGGTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR CCA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACATGGTCCTCAGAGCGTaGTCATCGGCTGCCCGGTTC | + |
Preference number: 4 (lower is better) Translates to: LWVLQVATALSPSPSAFHMVLRA*SSAARF Trigger: GAACCGGGCAGCCGATGACCACGCTCTGAGGACCAT...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTATGGGGCCCTGGAGGTaGCTCCTCTGGACAGGAACA | + |
Preference number: 4 (lower is better) Translates to: LALGAPSCYRPEPLPICLMGPWR*LLWTGT Trigger: TGTTCCTGTCCAGAGGAGCCACCTCCAGGGCCCCAT...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGCTCGGGTCTGCTGGGTaGAGGTGGAGGCCAACCAGT | + |
Preference number: 4 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGLGSAG*RWRPTS Trigger: ACTGGTTGGCCTCCACCTTCACCCAGCAGACCCGAG...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GTCCAGAGGCAAGGGATGGGCACAGTGACCACTGAGGGCCTGTGGGTGGGGAGGCGGAGAAGGAAGCAATaGACAGTCTGGGTCACGTCG | + |
Preference number: 4 (lower is better) Translates to: VQRQGMGTVTTEGLWVGRRRRKQ*TVWVTS Trigger: CGACGTGACCCAGACTGTCCATTGCTTCCTTCTCCG...CCTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTTGCCTCTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACCTTCCATTAGGGCCTTaGTCCAGCGGCTGTGGACTG | + |
Preference number: 4 (lower is better) Translates to: LWVLQVATALSPSPSAFHLPLGP*SSGCGL Trigger: CAGTCCACAGCCGCTGGACCAAGGCCCTAATGGAAG...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAACTCGGGTCTGCTGGGTaGAGGTGGAGGCCAACCAGT | + |
Preference number: 4 (lower is better) Translates to: EKGNPDLPAKIWGGGLRELGSAG*RWRPTS Trigger: ACTGGTTGGCCTCCACCTTCACCCAGCAGACCCGAG...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTTGGACATCTGGTTGGTaGTGCCACTTGCTGCCCGTT | + |
Preference number: 4 (lower is better) Translates to: LALGAPSCYRPEPLPICLWTSGW*CHLLPV Trigger: AACGGGCAGCAAGTGGCATCACCAACCAGATGTCCA...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTGTTTCTCTTCTGCCCTaGGACCTTTGGCTCGGGTCT | + |
Preference number: 4 (lower is better) Translates to: LALGAPSCYRPEPLPICLVSLLP*DLWLGS Trigger: AGACCCGAGCCAAAGGTCGCAGGGCAGAAGAGAAAC...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACGGTGATGCCACTTGCTaGCCGTTCCTTCCACTTCTG | + |
Preference number: 4 (lower is better) Translates to: LWVLQVATALSPSPSAFHGDATC*PFLPLL Trigger: CAGAAGTGGAAGGAACGGGCAGCAAGTGGCATCACC...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTACTCGGGTCTGCTGGGTaGAGGTGGAGGCCAACCAGT | + |
Preference number: 4 (lower is better) Translates to: GQEEALPGCTRSGCSKLLLGSAG*RWRPTS Trigger: ACTGGTTGGCCTCCACCTTCACCCAGCAGACCCGAG...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTACGAAGATCCCAGCCTaGACAGCATGCACGATGCTT | + |
Preference number: 4 (lower is better) Translates to: LALGAPSCYRPEPLPICLTKIPA*TACTML Trigger: AAGCATCGTGCATGCTGTGCAGGCTGGGATCTTCGT...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGCTGGGTCACGTCGGCTaGGTGGATCTGGTTGTGGTA | + |
Preference number: 4 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGLGHVG*VDLVVV Trigger: TACCACAACCAGATCCACGCAGCCGACGTGACCCAG...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGCATCTCTGACCCTCCCCTCCAAACTGTAGGAAGCCTGCAGGGAGCTTACTCCATGGTCCTCAGAGCGTaGTCATCGGCTGCCCGGTTC | + |
Preference number: 4 (lower is better) Translates to: GISDPPLQTVGSLQGAYSMVLRA*SSAARF Trigger: GAACCGGGCAGCCGATGACCACGCTCTGAGGACCAT...GGAGTAAGCTCCCTGCAGGCTTCCTACAGTTTGGAGGGGAGGGTCAGAGATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | TCCCGGGGACAGGAAGGAGGCAAAGGGTCAAAAACCCATCTAGATCAGGGTACACCATGTAGCGCAGCCTaGGGATGGGGCCCTGGAGGT | + |
Preference number: 4 (lower is better) Translates to: SRGQEGGKGSKTHLDQGTPCSAA*GWGPGG Trigger: ACCTCCAGGGCCCCATCCTCAGGCTGCGCTACATGG...TGTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACCGGCTGATGAGGCTATaGCGAGTCAGCAACTCAAAA | + |
Preference number: 4 (lower is better) Translates to: LWVLQVATALSPSPSAFHRLMRL*RVSNSK Trigger: TTTTGAGTTGCTGACTCGGCATAGCCTCATCAGCCG...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GTCCAGAGGCAAGGGATGGGCACAGTGACCACTGAGGGCCTGTGGGTGGGGAGGCTGGACACTCTTTTCTaGCACATCAGTCAGCACAGA | + |
Preference number: 4 (lower is better) Translates to: VQRQGMGTVTTEGLWVGRLDTLF*HISQHR Trigger: TCTGTGCTGACTGATGTGGCAGAAAAGAGTGTCCAG...CCTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTTGCCTCTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGGGTGATGCCACTTGCTaGCCGTTCCTTCCACTTCTG | + |
Preference number: 4 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGGDATC*PFLPLL Trigger: CAGAAGTGGAAGGAACGGGCAGCAAGTGGCATCACC...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACTTCCCATTCTGGTTGTaGTCATCTTCTGCAGGGGAG | + |
Preference number: 4 (lower is better) Translates to: LWVLQVATALSPSPSAFHFPFWL*SSSAGE Trigger: CTCCCCTGCAGAAGATGAGCACAACCAGAATGGGAA...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTATTGGCTCGGGTCTGCTaGGTGAAGGTGGAGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: GQEEALPGCTRSGCSKLLLARVC*VKVEAN Trigger: GTTGGCCTCCACCTTCACCCAGCAGACCCGAGCCAA...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | AGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGATGGAAGCAATGGACAGTCTaGGTCACGTCGGCTGCGTGG | + |
Preference number: 4 (lower is better) Translates to: RELTPPKWPKEESRGKGWKQWTV*VTSAAW Trigger: CCACGCAGCCGACGTGACCCAGACTGTCCATTGCTT...CCATCCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGCGGAGAAGGAAGCAATaGACAGTCTGGGTCACGTCG | + |
Preference number: 4 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGRRRKQ*TVWVTS Trigger: CGACGTGACCCAGACTGTCCATTGCTTCCTTCTCCG...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAACTTCCATTAGGGCCTTaGTCCAGCGGCTGTGGACTG | + |
Preference number: 4 (lower is better) Translates to: EKGNPDLPAKIWGGGLRELPLGP*SSGCGL Trigger: CAGTCCACAGCCGCTGGACCAAGGCCCTAATGGAAG...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | TCCCGGGGACAGGAAGGAGGCAAAGGGTCAAAAACCCATCTAGATCAGGGTACACTTCAGCTCCAGGGGTaGCGGGCAATCCGACTCCAG | + |
Preference number: 4 (lower is better) Translates to: SRGQEGGKGSKTHLDQGTLQLQG*RAIRLQ Trigger: CTGGAGTCGGATTGCCCGTCACCCCTGGAGCTGAAG...TGTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 |
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CDS-3UTR TCA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGAGAGGTCCAGGTTCTTaGGACAGTTGTGGACTGCAG | + |
Preference number: 4 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGRGPGS*DSCGLQ Trigger: CTGCAGTCCACAACTGTCTCAAGAACCTGGACCTCT...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTTTCGAAAGACAGAGCTaGTGTGGTGATTCTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: LALGAPSCYRPEPLPICLFERQS*CGDSPA Trigger: TGCTGGAGAATCACCACATCAGCTCTGTCTTTCGAA...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCGTTTCTCTTCTGCCCTaGGACCTTTGGCTCGGGTCT | + |
Preference number: 4 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLVSLLP*DLWLGS Trigger: AGACCCGAGCCAAAGGTCGCAGGGCAGAAGAGAAAC...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | AGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGATGGGTTTCTCTTCTGCCCTaGGACCTTTGGCTCGGGTCT | + |
Preference number: 4 (lower is better) Translates to: RELTPPKWPKEESRGKGWVSLLP*DLWLGS Trigger: AGACCCGAGCCAAAGGTCGCAGGGCAGAAGAGAAAC...CCATCCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAAAGCGTGGTCATCGGCTaGCCGGTTCAAGGAAAAGAC | + |
Preference number: 4 (lower is better) Translates to: EKGNPDLPAKIWGGGLRESVVIG*PVQGKD Trigger: GTCTTTTCCTTGAACCGGGCAGCCGATGACCACGCT...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTGGAAGCTGTTGGTTGTaGCTGTGTGCTCATAGTCAT | + |
Preference number: 4 (lower is better) Translates to: LALGAPSCYRPEPLPICLGSCWL*LCAHSH Trigger: ATGACTATGAGCACACAGGCACAACCAACAGCTTCC...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GGCATCTCTGACCCTCCCCTCCAAACTGTAGGAAGCCTGCAGGGAGCTTACTCCGTTGTGCTCATCTTCTaGAGGGGAGGATGGGGCTTC | + |
Preference number: 4 (lower is better) Translates to: GISDPPLQTVGSLQGAYSVVLIF*RGGWGF Trigger: GAAGCCCCATCCTCCCCTGCAGAAGATGAGCACAAC...GGAGTAAGCTCCCTGCAGGCTTCCTACAGTTTGGAGGGGAGGGTCAGAGATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGTTGGTCCAGCGGCTGTaGACTGACCACTGCTTAGTT | + |
Preference number: 4 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGLVQRL*TDHCLV Trigger: AACTAAGCAGTGGTCAGTCCACAGCCGCTGGACCAA...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | AGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGATGGAGAGGTCCAGGTTCTTaGGACAGTTGTGGACTGCAG | + |
Preference number: 4 (lower is better) Translates to: RELTPPKWPKEESRGKGWRGPGS*DSCGLQ Trigger: CTGCAGTCCACAACTGTCTCAAGAACCTGGACCTCT...CCATCCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR TCA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAAACAGAGCTGATGTGGTaGTTCTCCAGCACCGATCGA | + |
Preference number: 4 (lower is better) Translates to: EKGNPDLPAKIWGGGLRETELMW*FSSTDR Trigger: TCGATCGGTGCTGGAGAATCACCACATCAGCTCTGT...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | AGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGATGGACGAAGATCCCAGCCTaGACAGCATGCACGATGCTT | + |
Preference number: 4 (lower is better) Translates to: RELTPPKWPKEESRGKGWTKIPA*TACTML Trigger: AAGCATCGTGCATGCTGTGCAGGCTGGGATCTTCGT...CCATCCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GACTTTGGACTCAGTGAGGACCTGGTCAGCCCCCAGTTCCCTAATCCAGATTCCCTGGGTCACGTCGGCTaGGTGGATCTGGTTGTGGTA | + |
Preference number: 4 (lower is better) Translates to: DFGLSEDLVSPQFPNPDSLGHVG*VDLVVV Trigger: TACCACAACCAGATCCACGCAGCCGACGTGACCCAG...GGAATCTGGATTAGGGAACTGGGGGCTGACCAGGTCCTCACTGAGTCCAAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR GCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTAATCTCTGACAGGCAGTaGACCATGCCTGTGCGGAGA | + |
Preference number: 4 (lower is better) Translates to: GQEEALPGCTRSGCSKLLISDRQ*TMPVRR Trigger: TCTCCGCACAGGCATGGTGCACTGCCTGTCAGAGAT...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GTCCAGAGGCAAGGGATGGGCACAGTGACCACTGAGGGCCTGTGGGTGGGGAGGTTCATAGTCTTCACTTaGTGGAAATGGCAGGACATG | + |
Preference number: 4 (lower is better) Translates to: VQRQGMGTVTTEGLWVGRFIVFT*WKWQDM Trigger: CATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAA...CCTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTTGCCTCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | TCCCGGGGACAGGAAGGAGGCAAAGGGTCAAAAACCCATCTAGATCAGGGTACATTGGCTCGGGTCTGCTaGGTGAAGGTGGAGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: SRGQEGGKGSKTHLDQGTLARVC*VKVEAN Trigger: GTTGGCCTCCACCTTCACCCAGCAGACCCGAGCCAA...TGTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCCGATGCTTCGGAACTTaGGTTTCTCTTCTGCCCTGC | + |
Preference number: 4 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLRCFGT*VSLLPC Trigger: GCAGGGCAGAAGAGAAACCCAAGTTCCGAAGCATCG...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACATGGTCCTCAGAGCGTaGTCATCGGCTGCCCGGTTC | + |
Preference number: 4 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHMVLRA*SSAARF Trigger: GAACCGGGCAGCCGATGACCACGCTCTGAGGACCAT...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACTGGCACATTCTGACTTaGTCTGAATGTGGAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: LWVLQVATALSPSPSAFHWHILT*SECGSC Trigger: ACAGCTTCCACATTCAGACCAAGTCAGAATGTGCCA...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGTTCACTTGCTGGAAATaGCAGGACATGTCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGFTCWK*QDMSVA Trigger: GGCCACAGACATGTCCTGCCATTTCCAGCAAGTGAA...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACGAAGAGATAGGGCCTTaGACTTGTCAATCCTTTCCA | + |
Preference number: 4 (lower is better) Translates to: LWVLQVATALSPSPSAFHEEIGP*TCQSFP Trigger: TGGAAAGGATTGACAAGTCCAAGGCCCTATCTCTTC...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | AGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGATGGTTGGTCCAGCGGCTGTaGACTGACCACTGCTTAGTT | + |
Preference number: 4 (lower is better) Translates to: RELTPPKWPKEESRGKGWLVQRL*TDHCLV Trigger: AACTAAGCAGTGGTCAGTCCACAGCCGCTGGACCAA...CCATCCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGCATCTCTGACCCTCCCCTCCAAACTGTAGGAAGCCTGCAGGGAGCTTACTCCGCCTCCTTGTCACCCTaGCGGAAGAACTCTTCCATT | + |
Preference number: 4 (lower is better) Translates to: GISDPPLQTVGSLQGAYSASLSP*RKNSSI Trigger: AATGGAAGAGTTCTTCCGCCAGGGTGACAAGGAGGC...GGAGTAAGCTCCCTGCAGGCTTCCTACAGTTTGGAGGGGAGGGTCAGAGATGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTTCATCAATGGACATCTaGTTGGTGATGCCACTTGCT | + |
Preference number: 4 (lower is better) Translates to: LALGAPSCYRPEPLPICLSSMDI*LVMPLA Trigger: AGCAAGTGGCATCACCAACCAGATGTCCATTGATGA...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | TCCCACCTCCTTCTAGCCTGTGTCTCTTCTCATAAAGGTGTCCCCTCTGCATTCCCAGCGGCTGTGGACTaGCCACTGCTTAGTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: SHLLLACVSSHKGVPSAFPAAVD*PLLSWV Trigger: CACCCAACTAAGCAGTGGTCAGTCCACAGCCGCTGG...GAATGCAGAGGGGACACCTTTATGAGAAGAGACACAGGCTAGAAGGAGGTGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR TCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAACCAGCGGCTGTGGACTaGCCACTGCTTAGTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIEPAAVD*PLLSWV Trigger: CACCCAACTAAGCAGTGGTCAGTCCACAGCCGCTGG...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACAGGTGGCACGGAAACTaGCCACATCAGGGTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: HTPLEQMGEPVLMDSANDRWHGN*PHQGWG Trigger: ACCCCAACCCTGATGTGGTCAGTTTCCGTGCCACCT...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | CTCGCTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTTTCTGTTTGTTCTCTTaGATGTACTTGGTCCAGGTG | + |
Preference number: 4 (lower is better) Translates to: LALGAPSCYRPEPLPICLFCLFS*MYLVQV Trigger: CACCTGGACCAAGTACATTCAAGAGAACAAACAGAA...AAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAGCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAAGCACAGCATGCACGATaGTTCGGAACTTGGGTTTCT | + |
Preference number: 4 (lower is better) Translates to: EKGNPDLPAKIWGGGLREAQHAR*FGTWVS Trigger: AGAAACCCAAGTTCCGAAGCATCGTGCATGCTGTGC...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACCTGGGTCACGTCGGCTaGGTGGATCTGGTTGTGGTA | + |
Preference number: 4 (lower is better) Translates to: HTPLEQMGEPVLMDSANDLGHVG*VDLVVV Trigger: TACCACAACCAGATCCACGCAGCCGACGTGACCCAG...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTACTGTGGACTGACCACTaGTTAGTTGGGTGGCTGATG | + |
Preference number: 4 (lower is better) Translates to: GQEEALPGCTRSGCSKLLLWTDH*LVGWLM Trigger: CATCAGCCACCCAACTAAGCAGTGGTCAGTCCACAG...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTAGTTGGTGATGCCACTTaGTGCCCGTTCCTTCCACTT | + |
Preference number: 4 (lower is better) Translates to: GQEEALPGCTRSGCSKLLVGDAT*CPFLPL Trigger: AAGTGGAAGGAACGGGCAGCAAGTGGCATCACCAAC...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACAAGCAATGGACAGTCTaGGTCACGTCGGCTGCGTGG | + |
Preference number: 4 (lower is better) Translates to: HTPLEQMGEPVLMDSANDKQWTV*VTSAAW Trigger: CCACGCAGCCGACGTGACCCAGACTGTCCATTGCTT...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGCATCTCTGACCCTCCCCTCCAAACTGTAGGAAGCCTGCAGGGAGCTTACTCCTTCACTTGCTGGAAATaGCAGGACATGTCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: GISDPPLQTVGSLQGAYSFTCWK*QDMSVA Trigger: GGCCACAGACATGTCCTGCCATTTCCAGCAAGTGAA...GGAGTAAGCTCCCTGCAGGCTTCCTACAGTTTGGAGGGGAGGGTCAGAGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | TCCCGGGGACAGGAAGGAGGCAAAGGGTCAAAAACCCATCTAGATCAGGGTACACTTCCATTAGGGCCTTaGTCCAGCGGCTGTGGACTG | + |
Preference number: 4 (lower is better) Translates to: SRGQEGGKGSKTHLDQGTLPLGP*SSGCGL Trigger: CAGTCCACAGCCGCTGGACCAAGGCCCTAATGGAAG...TGTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTAGTGCGATCACAGAGTaGAGAGAAGGGCAGGCCCAG | + |
Preference number: 4 (lower is better) Translates to: GWGFFLTGGQFINGHLVGSAITE*REGQAQ Trigger: CTGGGCCTGCCCTTCTCTCCACTCTGTGATCGCACT...ACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR CCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCAAACCTATCTGGGACTaGGCCACCAATGTGGAAGTG | + |
Preference number: 4 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLKPIWD*ATNVEV Trigger: CACTTCCACATTGGTGGCCCAGTCCCAGATAGGTTT...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | TCCCGGGGACAGGAAGGAGGCAAAGGGTCAAAAACCCATCTAGATCAGGGTACATTCTGCAGGGGAGGATaGGGCTTCTTCCTCACAGGG | + |
Preference number: 4 (lower is better) Translates to: SRGQEGGKGSKTHLDQGTFCRGG*GFFLTG Trigger: CCCTGTGAGGAAGAAGCCCCATCCTCCCCTGCAGAA...TGTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACTTCTGCAGGGGAGGATaGGGCTTCTTCCTCACAGGG | + |
Preference number: 4 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHFCRGG*GFFLTG Trigger: CCCTGTGAGGAAGAAGCCCCATCCTCCCCTGCAGAA...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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3UTR CAA 72 bp | TTGGTCCAGGTGGCACGGAAACTGACCACATCAGGGTaGGGGTCTCCTACGTCCACATCTAAAGAAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: LVQVARKLTTSG*GSPTSTSKEGW Trigger: CCAGCCTTCTTTAGATGTGGACGTAGGAGACCCCAACCCTGATGTGGTCAGTTTCCGTGCCACCTGGACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR TCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGACTTCAGCTCCAGGGGTaGCGGGCAATCCGACTCCAG | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGLQLQG*RAIRLQ Trigger: CTGGAGTCGGATTGCCCGTCACCCCTGGAGCTGAAG...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 |
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CDS-3UTR GCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACCAGGGCCCGCAGCTCTaGAAATTCATCCTTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHQGPQL*KFILGE Trigger: CTCACCAAGGATGAATTTGCAGAGCTGCGGGCCCTG...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GGATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTCAGGGCCCGCAGCTCTaGAAATTCATCCTTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: GWGFFLTGGQFINGHLVGQGPQL*KFILGE Trigger: CTCACCAAGGATGAATTTGCAGAGCTGCGGGCCCTG...ACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR GCA 90 bp | CCTCATCTTAGGAAGGAACCTGAAGGGACACCTGCCCTTCCCATGCAGGGCTTTCTGTGGACTGACCACTaGTTAGTTGGGTGGCTGATG | + |
Preference number: 4 (lower is better) Translates to: PHLRKEPEGTPALPMQGFLWTDH*LVGWLM Trigger: CATCAGCCACCCAACTAAGCAGTGGTCAGTCCACAG...AAAGCCCTGCATGGGAAGGGCAGGTGTCCCTTCAGGTTCCTTCCTAAGATGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | TACATCCTGAAGGAAGACCTCAGAGCGTTTACAGACATTGGTCGGATGAGGGCTTTGGCTCGGGTCTGCTaGGTGAAGGTGGAGGCCAAC | + |
Preference number: 4 (lower is better) Translates to: YILKEDLRAFTDIGRMRALARVC*VKVEAN Trigger: GTTGGCCTCCACCTTCACCCAGCAGACCCGAGCCAA...AGCCCTCATCCGACCAATGTCTGTAAACGCTCTGAGGTCTTCCTTCAGGATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAATGGAGGTGGCTCCTCTaGACAGGAACAGGGTTTGCC | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIEWRWLL*TGTGFA Trigger: GGCAAACCCTGTTCCTGTCCAGAGGAGCCACCTCCA...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAACATTCTGACTTGGTCTaGATGTGGAAGCTGTTGGTT | + |
Preference number: 4 (lower is better) Translates to: EKGNPDLPAKIWGGGLREHSDLV*MWKLLV Trigger: AACCAACAGCTTCCACATTCAGACCAAGTCAGAATG...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | GGCATCTCTGACCCTCCCCTCCAAACTGTAGGAAGCCTGCAGGGAGCTTACTCCCATTCTGACTTGGTCTaGATGTGGAAGCTGTTGGTT | + |
Preference number: 4 (lower is better) Translates to: GISDPPLQTVGSLQGAYSHSDLV*MWKLLV Trigger: AACCAACAGCTTCCACATTCAGACCAAGTCAGAATG...GGAGTAAGCTCCCTGCAGGCTTCCTACAGTTTGGAGGGGAGGGTCAGAGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | GATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTGACAGAGCTGATGTGGTaGTTCTCCAGCACCGATCGA | + |
Preference number: 4 (lower is better) Translates to: DGASSSQGDSSSMDIWLVTELMW*FSSTDR Trigger: TCGATCGGTGCTGGAGAATCACCACATCAGCTCTGT...CACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR TCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGACCAGCGGCTGTGGACTaGCCACTGCTTAGTTGGGTG | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGPAAVD*PLLSWV Trigger: CACCCAACTAAGCAGTGGTCAGTCCACAGCCGCTGG...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCAGGTGGCACGGAAACTaGCCACATCAGGGTTGGGGT | + |
Preference number: 4 (lower is better) Translates to: WIVLMTSKTLDSVRTWSARWHGN*PHQGWG Trigger: ACCCCAACCCTGATGTGGTCAGTTTCCGTGCCACCT...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GCACGGAAACTGACCACATCAGGGTTGGGGTCTCCTACGTCCACATCTAAAGAAAGCGTGGTCATCGGCTaGCCGGTTCAAGGAAAAGAC | + |
Preference number: 4 (lower is better) Translates to: ARKLTTSGLGSPTSTSKESVVIG*PVQGKD Trigger: GTCTTTTCCTTGAACCGGGCAGCCGATGACCACGCT...TTCTTTAGATGTGGACGTAGGAGACCCCAACCCTGATGTGGTCAGTTTCCGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR GCA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACCTGTGGACTGACCACTaGTTAGTTGGGTGGCTGATG | + |
Preference number: 4 (lower is better) Translates to: HTPLEQMGEPVLMDSANDLWTDH*LVGWLM Trigger: CATCAGCCACCCAACTAAGCAGTGGTCAGTCCACAG...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR CCA 90 bp | AGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGATGGTGGCACATTCTGACTTaGTCTGAATGTGGAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: RELTPPKWPKEESRGKGWWHILT*SECGSC Trigger: ACAGCTTCCACATTCAGACCAAGTCAGAATGTGCCA...CCATCCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR CCA 90 bp | AGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGATGGGAAGAGATAGGGCCTTaGACTTGTCAATCCTTTCCA | + |
Preference number: 4 (lower is better) Translates to: RELTPPKWPKEESRGKGWEEIGP*TCQSFP Trigger: TGGAAAGGATTGACAAGTCCAAGGCCCTATCTCTTC...CCATCCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR CCA 90 bp | GGCATCTCTGACCCTCCCCTCCAAACTGTAGGAAGCCTGCAGGGAGCTTACTCCGAAGAGATAGGGCCTTaGACTTGTCAATCCTTTCCA | + |
Preference number: 4 (lower is better) Translates to: GISDPPLQTVGSLQGAYSEEIGP*TCQSFP Trigger: TGGAAAGGATTGACAAGTCCAAGGCCCTATCTCTTC...GGAGTAAGCTCCCTGCAGGCTTCCTACAGTTTGGAGGGGAGGGTCAGAGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR CCA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACGCCTCCTTGTCACCCTaGCGGAAGAACTCTTCCATT | + |
Preference number: 4 (lower is better) Translates to: HTPLEQMGEPVLMDSANDASLSP*RKNSSI Trigger: AATGGAAGAGTTCTTCCGCCAGGGTGACAAGGAGGC...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACTGGCTGCAGCAAAGATaGTGGCCAAGACCTCAATCT | + |
Preference number: 4 (lower is better) Translates to: HTPLEQMGEPVLMDSANDWLQQR*WPRPQS Trigger: AGATTGAGGTCTTGGCCATCATCTTTGCTGCAGCCA...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR TCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACTGGCTGCAGCAAAGATaGTGGCCAAGACCTCAATCT | + |
Preference number: 4 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHWLQQR*WPRPQS Trigger: AGATTGAGGTCTTGGCCATCATCTTTGCTGCAGCCA...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAACAGAGCTGATGTGGTaGTTCTCCAGCACCGATCGA | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIETELMW*FSSTDR Trigger: TCGATCGGTGCTGGAGAATCACCACATCAGCTCTGT...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR TCA 90 bp | CCTCATCTTAGGAAGGAACCTGAAGGGACACCTGCCCTTCCCATGCAGGGCTTTTTCGAAAGACAGAGCTaGTGTGGTGATTCTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: PHLRKEPEGTPALPMQGFFERQS*CGDSPA Trigger: TGCTGGAGAATCACCACATCAGCTCTGTCTTTCGAA...AAAGCCCTGCATGGGAAGGGCAGGTGTCCCTTCAGGTTCCTTCCTAAGATGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR TCA 90 bp | AGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGATGGTTCTGTTTGTTCTCTTaGATGTACTTGGTCCAGGTG | + |
Preference number: 4 (lower is better) Translates to: RELTPPKWPKEESRGKGWFCLFS*MYLVQV Trigger: CACCTGGACCAAGTACATTCAAGAGAACAAACAGAA...CCATCCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GCTCTCGTTCTAGAGCAGCCCAAGTCATTCAGACAGCCTTTCCTGTGGCTTCCTGCACAGCATGCACGATaGTTCGGAACTTGGGTTTCT | + |
Preference number: 4 (lower is better) Translates to: ALVLEQPKSFRQPFLWLPAQHAR*FGTWVS Trigger: AGAAACCCAAGTTCCGAAGCATCGTGCATGCTGTGC...AGGAAGCCACAGGAAAGGCTGTCTGAATGACTTGGGCTGCTCTAGAACGAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR GCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCCCAGCCTGCACAGCATaGACGATGCTTCGGAACTTG | + |
Preference number: 4 (lower is better) Translates to: WIVLMTSKTLDSVRTWSAPACTA*TMLRNL Trigger: CAAGTTCCGAAGCATCGTGCATGCTGTGCAGGCTGG...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | TACATCCTGAAGGAAGACCTCAGAGCGTTTACAGACATTGGTCGGATGAGGGCTCCAGCCTGCACAGCATaGACGATGCTTCGGAACTTG | + |
Preference number: 4 (lower is better) Translates to: YILKEDLRAFTDIGRMRAPACTA*TMLRNL Trigger: CAAGTTCCGAAGCATCGTGCATGCTGTGCAGGCTGG...AGCCCTCATCCGACCAATGTCTGTAAACGCTCTGAGGTCTTCCTTCAGGATGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR GCA 90 bp | GCTCTCGTTCTAGAGCAGCCCAAGTCATTCAGACAGCCTTTCCTGTGGCTTCCTCGGCTGATGAGGCTATaGCGAGTCAGCAACTCAAAA | + |
Preference number: 4 (lower is better) Translates to: ALVLEQPKSFRQPFLWLPRLMRL*RVSNSK Trigger: TTTTGAGTTGCTGACTCGGCATAGCCTCATCAGCCG...AGGAAGCCACAGGAAAGGCTGTCTGAATGACTTGGGCTGCTCTAGAACGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR CCA 90 bp | TCCCGGGGACAGGAAGGAGGCAAAGGGTCAAAAACCCATCTAGATCAGGGTACATCCACATTTTCTTGCTaGGGGCTGACTTCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: SRGQEGGKGSKTHLDQGTSTFSC*GLTSAP Trigger: TGGAGCTGAAGTCAGCCCCCAGCAAGAAAATGTGGA...TGTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 |
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CDS-3UTR CCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAACGATGCTTCGGAACTTaGGTTTCTCTTCTGCCCTGC | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIERCFGT*VSLLPC Trigger: GCAGGGCAGAAGAGAAACCCAAGTTCCGAAGCATCG...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGAAAGCAATGGACAGTCTaGGTCACGTCGGCTGCGTGG | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGKQWTV*VTSAAW Trigger: CCACGCAGCCGACGTGACCCAGACTGTCCATTGCTT...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCATAGTCTTCACTTGCTaGAAATGGCAGGACATGTCT | + |
Preference number: 4 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLIVFTC*KWQDMS Trigger: AGACATGTCCTGCCATTTCCAGCAAGTGAAGACTAT...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAGCCTCCTTGTCACCCTaGCGGAAGAACTCTTCCATT | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIEASLSP*RKNSSI Trigger: AATGGAAGAGTTCTTCCGCCAGGGTGACAAGGAGGC...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGAAGTGCGATCACAGAGTaGAGAGAAGGGCAGGCCCAG | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGSAITE*REGQAQ Trigger: CTGGGCCTGCCCTTCTCTCCACTCTGTGATCGCACT...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CACACTCCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACAAACCTATCTGGGACTaGGCCACCAATGTGGAAGTG | + |
Preference number: 4 (lower is better) Translates to: HTPLEQMGEPVLMDSANDKPIWD*ATNVEV Trigger: CACTTCCACATTGGTGGCCCAGTCCCAGATAGGTTT...GTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGGAGTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACAAACCTATCTGGGACTaGGCCACCAATGTGGAAGTG | + |
Preference number: 4 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHKPIWD*ATNVEV Trigger: CACTTCCACATTGGTGGCCCAGTCCCAGATAGGTTT...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCAGAGGTCCAGGTTCTTaGGACAGTTGTGGACTGCAG | + |
Preference number: 4 (lower is better) Translates to: WIVLMTSKTLDSVRTWSARGPGS*DSCGLQ Trigger: CTGCAGTCCACAACTGTCTCAAGAACCTGGACCTCT...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | GAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAGACTTTTGGACATCTGGTTGGTaGTGCCACTTGCTGCCCGTT | + |
Preference number: 4 (lower is better) Translates to: EQMGEPVLMDSANDIEDFWTSGW*CHLLPV Trigger: AACGGGCAGCAAGTGGCATCACCAACCAGATGTCCA...AAAGTCTTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGAATCTCTGACAGGCAGTaGACCATGCCTGTGCGGAGA | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGISDRQ*TMPVRR Trigger: TCTCCGCACAGGCATGGTGCACTGCCTGTCAGAGAT...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | TCCCGGGGACAGGAAGGAGGCAAAGGGTCAAAAACCCATCTAGATCAGGGTACAGGAAGCTGTTGGTTGTaGCTGTGTGCTCATAGTCAT | + |
Preference number: 4 (lower is better) Translates to: SRGQEGGKGSKTHLDQGTGSCWL*LCAHSH Trigger: ATGACTATGAGCACACAGGCACAACCAACAGCTTCC...TGTACCCTGATCTAGATGGGTTTTTGACCCTTTGCCTCCTTCCTGTCCCCGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACGGAAGCTGTTGGTTGTaGCTGTGTGCTCATAGTCAT | + |
Preference number: 4 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHGSCWL*LCAHSH Trigger: ATGACTATGAGCACACAGGCACAACCAACAGCTTCC...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GGCATCTCTGACCCTCCCCTCCAAACTGTAGGAAGCCTGCAGGGAGCTTACTCCTTCATCTCATCATCCTaGATCATTCGAAAGACAGAG | + |
Preference number: 4 (lower is better) Translates to: GISDPPLQTVGSLQGAYSFISSS*IIRKTE Trigger: CTCTGTCTTTCGAATGATGCAGGATGATGAGATGAA...GGAGTAAGCTCCCTGCAGGCTTCCTACAGTTTGGAGGGGAGGGTCAGAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAGACTTTCAGGGCCCGCAGCTCTaGAAATTCATCCTTGGTGAG | + |
Preference number: 4 (lower is better) Translates to: EQMGEPVLMDSANDIEDFQGPQL*KFILGE Trigger: CTCACCAAGGATGAATTTGCAGAGCTGCGGGCCCTG...AAAGTCTTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTATCAATCCTTTCCAACTaGTGCAGTGCTGTCTTCATA | + |
Preference number: 4 (lower is better) Translates to: GQEEALPGCTRSGCSKLLSILSN*CSAVFI Trigger: TATGAAGACAGCACTGCAGCAGTTGGAAAGGATTGA...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | TACATCCTGAAGGAAGACCTCAGAGCGTTTACAGACATTGGTCGGATGAGGGCTGTTGGTGATGCCACTTaGTGCCCGTTCCTTCCACTT | + |
Preference number: 4 (lower is better) Translates to: YILKEDLRAFTDIGRMRAVGDAT*CPFLPL Trigger: AAGTGGAAGGAACGGGCAGCAAGTGGCATCACCAAC...AGCCCTCATCCGACCAATGTCTGTAAACGCTCTGAGGTCTTCCTTCAGGATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAATTCCCATTCTGGTTGTaGTCATCTTCTGCAGGGGAG | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIEFPFWL*SSSAGE Trigger: CTCCCCTGCAGAAGATGAGCACAACCAGAATGGGAA...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GCACGGAAACTGACCACATCAGGGTTGGGGTCTCCTACGTCCACATCTAAAGAATCCACATTTTCTTGCTaGGGGCTGACTTCAGCTCCA | + |
Preference number: 4 (lower is better) Translates to: ARKLTTSGLGSPTSTSKESTFSC*GLTSAP Trigger: TGGAGCTGAAGTCAGCCCCCAGCAAGAAAATGTGGA...TTCTTTAGATGTGGACGTAGGAGACCCCAACCCTGATGTGGTCAGTTTCCGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR CCA 90 bp | TACATCCTGAAGGAAGACCTCAGAGCGTTTACAGACATTGGTCGGATGAGGGCTCGATGCTTCGGAACTTaGGTTTCTCTTCTGCCCTGC | + |
Preference number: 4 (lower is better) Translates to: YILKEDLRAFTDIGRMRARCFGT*VSLLPC Trigger: GCAGGGCAGAAGAGAAACCCAAGTTCCGAAGCATCG...AGCCCTCATCCGACCAATGTCTGTAAACGCTCTGAGGTCTTCCTTCAGGATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGACGGAGAAGGAAGCAATaGACAGTCTGGGTCACGTCG | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGRRRKQ*TVWVTS Trigger: CGACGTGACCCAGACTGTCCATTGCTTCCTTCTCCG...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTAATAGTCTTCACTTGCTaGAAATGGCAGGACATGTCT | + |
Preference number: 4 (lower is better) Translates to: GQEEALPGCTRSGCSKLLIVFTC*KWQDMS Trigger: AGACATGTCCTGCCATTTCCAGCAAGTGAAGACTAT...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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3UTR CAA 72 bp | GTACAAGCCCCTCAAGCCCAGACCATCCCCAAGTATTaGAGGACTCCAGGAAAGACTTCCCTCAGACAGAAT | + |
Preference number: 4 (lower is better) Translates to: VQAPQAQTIPKY*RTPGKTSLRQN Trigger: ATTCTGTCTGAGGGAAGTCTTTCCTGGAGTCCTCAAATACTTGGGGATGGTCTGGGCTTGAGGGGCTTGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCTGGCTGCAGCAAAGATaGTGGCCAAGACCTCAATCT | + |
Preference number: 4 (lower is better) Translates to: WIVLMTSKTLDSVRTWSAWLQQR*WPRPQS Trigger: AGATTGAGGTCTTGGCCATCATCTTTGCTGCAGCCA...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR TCA 90 bp | GATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTGCATTCTGACTTGGTCTaGATGTGGAAGCTGTTGGTT | + |
Preference number: 4 (lower is better) Translates to: DGASSSQGDSSSMDIWLVHSDLV*MWKLLV Trigger: AACCAACAGCTTCCACATTCAGACCAAGTCAGAATG...CACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR GCA 90 bp | GACTTTGGACTCAGTGAGGACCTGGTCAGCCCCCAGTTCCCTAATCCAGATTCCTCAATCCTTTCCAACTaGTGCAGTGCTGTCTTCATA | + |
Preference number: 4 (lower is better) Translates to: DFGLSEDLVSPQFPNPDSSILSN*CSAVFI Trigger: TATGAAGACAGCACTGCAGCAGTTGGAAAGGATTGA...GGAATCTGGATTAGGGAACTGGGGGCTGACCAGGTCCTCACTGAGTCCAAAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR GCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAACTGGACACTCTTTTCTaGCACATCAGTCAGCACAGA | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIELDTLF*HISQHR Trigger: TCTGTGCTGACTGATGTGGCAGAAAAGAGTGTCCAG...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAGAATGTGGAAGCTGTTaGTTGTGCCTGTGTGCTCAT | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIEECGSC*LCLCAH Trigger: ATGAGCACACAGGCACAACCAACAGCTTCCACATTC...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACTGGCACATTCTGACTTaGTCTGAATGTGGAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHWHILT*SECGSC Trigger: ACAGCTTCCACATTCAGACCAAGTCAGAATGTGCCA...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GACTTTGGACTCAGTGAGGACCTGGTCAGCCCCCAGTTCCCTAATCCAGATTCCGATCATTGTACAGGATaGCACATTCTGACTTGGTCT | + |
Preference number: 4 (lower is better) Translates to: DFGLSEDLVSPQFPNPDSDHCTG*HILTWS Trigger: AGACCAAGTCAGAATGTGCCATCCTGTACAATGATC...GGAATCTGGATTAGGGAACTGGGGGCTGACCAGGTCCTCACTGAGTCCAAAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
CDS-3UTR CCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGATTGGTCCAGCGGCTGTaGACTGACCACTGCTTAGTT | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGLVQRL*TDHCLV Trigger: AACTAAGCAGTGGTCAGTCCACAGCCGCTGGACCAA...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR CAA 72 bp | CCTGCTTGTACTGGGGCTAGCTGCTCTCTCCTTCCTTaGCTCATAAGATACATCCTGAAGGAAGACCTCAGA | + |
Preference number: 4 (lower is better) Translates to: PACTGASCSLLP*LIRYILKEDLR Trigger: TCTGAGGTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGAGAGCAGCTAGCCCCAGTACAAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
3UTR CAA 72 bp | GGAGTTTCCTGGGACTTAACAAGAAGGGGGTTGCTGTaGCTCTGCCAGTCAGTCCTAGAATGTTCACACACA | + |
Preference number: 4 (lower is better) Translates to: GVSWDLTRRGLL*LCQSVLECSHT Trigger: TGTGTGTGAACATTCTAGGACTGACTGGCAGAGCAACAGCAACCCCCTTCTTGTTAAGTCCCAGGAAACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
3UTR CAA 72 bp | AGCCAAGGAGTTTCCTGGGACTTAACAAGAAGGGGGTaGCTGTTGCTCTGCCAGTCAGTCCTAGAATGTTCA | + |
Preference number: 4 (lower is better) Translates to: SQGVSWDLTRRG*LLLCQSVLECS Trigger: TGAACATTCTAGGACTGACTGGCAGAGCAACAGCAACCCCCTTCTTGTTAAGTCCCAGGAAACTCCTTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR TCA 90 bp | TACATCCTGAAGGAAGACCTCAGAGCGTTTACAGACATTGGTCGGATGAGGGCTTTCGAAAGACAGAGCTaGTGTGGTGATTCTCCAGCA | + |
Preference number: 4 (lower is better) Translates to: YILKEDLRAFTDIGRMRAFERQS*CGDSPA Trigger: TGCTGGAGAATCACCACATCAGCTCTGTCTTTCGAA...AGCCCTCATCCGACCAATGTCTGTAAACGCTCTGAGGTCTTCCTTCAGGATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GTTCTAGAGCAGCCCAAGTCATTCAGACAGCCTTTCCTGTGGCTTCCTATTTTAACGAAGATCCCAGCCTaGACAGCATGCACGATGCTT | + |
Preference number: 4 (lower is better) Translates to: VLEQPKSFRQPFLWLPILTKIPA*TACTML Trigger: AAGCATCGTGCATGCTGTGCAGGCTGGGATCTTCGT...TAAAATAGGAAGCCACAGGAAAGGCTGTCTGAATGACTTGGGCTGCTCTAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
||
CDS-3UTR GCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGACGGCTGATGAGGCTATaGCGAGTCAGCAACTCAAAA | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGRLMRL*RVSNSK Trigger: TTTTGAGTTGCTGACTCGGCATAGCCTCATCAGCCG...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR GCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAATTCCAACTGCTGCAGTaGTGTCTTCATAGTCTTCAC | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIEFQLLQ*CLHSLH Trigger: GTGAAGACTATGAAGACAGCACTGCAGCAGTTGGAA...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | TCTCCTTCCTTTGCTCATAAGATACATCCTGAAGGAAGACCTCAGAGCGTTTACGTTGTGCTCATCTTCTaGAGGGGAGGATGGGGCTTC | + |
Preference number: 4 (lower is better) Translates to: SPSFAHKIHPEGRPQSVYVVLIF*RGGWGF Trigger: GAAGCCCCATCCTCCCCTGCAGAAGATGAGCACAAC...GTAAACGCTCTGAGGTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
||
CDS-3UTR CCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGATTCACTTGCTGGAAATaGCAGGACATGTCTGTGGCC | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGFTCWK*QDMSVA Trigger: GGCCACAGACATGTCCTGCCATTTCCAGCAAGTGAA...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR CCA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACATAGTCTTCACTTGCTaGAAATGGCAGGACATGTCT | + |
Preference number: 4 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHIVFTC*KWQDMS Trigger: AGACATGTCCTGCCATTTCCAGCAAGTGAAGACTAT...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
||
CDS-3UTR CCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAATCATCAATGGACATCTaGTTGGTGATGCCACTTGCT | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIESSMDI*LVMPLA Trigger: AGCAAGTGGCATCACCAACCAGATGTCCATTGATGA...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAATCCAGATTCCCATTCTaGTTGTGCTCATCTTCTGCA | + |
Preference number: 4 (lower is better) Translates to: PLEQMGEPVLMDSANDIESRFPF*LCSSSA Trigger: TGCAGAAGATGAGCACAACCAGAATGGGAATCTGGA...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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3UTR CAA 72 bp | TCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTaGGTGATGCCTACAGAGGGTTCCAAGAAATCTGAT | + |
Preference number: 4 (lower is better) Translates to: SSQGDSSSMDIW*VMPTEGSKKSD Trigger: ATCAGATTTCTTGGAACCCTCTGTAGGCATCACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR GCA 90 bp | GGATGGGGCTTCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTGGTTGGTTTCATCTCATCATCCTaGATCATTCGAAAGACAGAG | + |
Preference number: 4 (lower is better) Translates to: GWGFFLTGGQFINGHLVGFISSS*IIRKTE Trigger: CTCTGTCTTTCGAATGATGCAGGATGATGAGATGAA...ACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGAAGCCCCATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR GCA 90 bp | TACATCCTGAAGGAAGACCTCAGAGCGTTTACAGACATTGGTCGGATGAGGGCTTTCCAACTGCTGCAGTaGTGTCTTCATAGTCTTCAC | + |
Preference number: 4 (lower is better) Translates to: YILKEDLRAFTDIGRMRAFQLLQ*CLHSLH Trigger: GTGAAGACTATGAAGACAGCACTGCAGCAGTTGGAA...AGCCCTCATCCGACCAATGTCTGTAAACGCTCTGAGGTCTTCCTTCAGGATGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAGACTTTCTGGACACTCTTTTCTaGCACATCAGTCAGCACAGA | + |
Preference number: 4 (lower is better) Translates to: EQMGEPVLMDSANDIEDFLDTLF*HISQHR Trigger: TCTGTGCTGACTGATGTGGCAGAAAAGAGTGTCCAG...AAAGTCTTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAGACTTTGAATGTGGAAGCTGTTaGTTGTGCCTGTGTGCTCAT | + |
Preference number: 4 (lower is better) Translates to: EQMGEPVLMDSANDIEDFECGSC*LCLCAH Trigger: ATGAGCACACAGGCACAACCAACAGCTTCCACATTC...AAAGTCTTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | TACATCCTGAAGGAAGACCTCAGAGCGTTTACAGACATTGGTCGGATGAGGGCTTTCATAGTCTTCACTTaGTGGAAATGGCAGGACATG | + |
Preference number: 4 (lower is better) Translates to: YILKEDLRAFTDIGRMRAFIVFT*WKWQDM Trigger: CATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAA...AGCCCTCATCCGACCAATGTCTGTAAACGCTCTGAGGTCTTCCTTCAGGATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCGATCATTGTACAGGATaGCACATTCTGACTTGGTCT | + |
Preference number: 4 (lower is better) Translates to: WIVLMTSKTLDSVRTWSADHCTG*HILTWS Trigger: AGACCAAGTCAGAATGTGCCATCCTGTACAATGATC...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | TACATCCTGAAGGAAGACCTCAGAGCGTTTACAGACATTGGTCGGATGAGGGCTGATCATTGTACAGGATaGCACATTCTGACTTGGTCT | + |
Preference number: 4 (lower is better) Translates to: YILKEDLRAFTDIGRMRADHCTG*HILTWS Trigger: AGACCAAGTCAGAATGTGCCATCCTGTACAATGATC...AGCCCTCATCCGACCAATGTCTGTAAACGCTCTGAGGTCTTCCTTCAGGATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCTTCATCTCATCATCCTaGATCATTCGAAAGACAGAG | + |
Preference number: 4 (lower is better) Translates to: WIVLMTSKTLDSVRTWSAFISSS*IIRKTE Trigger: CTCTGTCTTTCGAATGATGCAGGATGATGAGATGAA...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGATCAATCCTTTCCAACTaGTGCAGTGCTGTCTTCATA | + |
Preference number: 4 (lower is better) Translates to: GTEGTPKMYCLETWRQEGSILSN*CSAVFI Trigger: TATGAAGACAGCACTGCAGCAGTTGGAAAGGATTGA...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | TCTCCTTCCTTTGCTCATAAGATACATCCTGAAGGAAGACCTCAGAGCGTTTACGAATGTGGAAGCTGTTaGTTGTGCCTGTGTGCTCAT | + |
Preference number: 4 (lower is better) Translates to: SPSFAHKIHPEGRPQSVYECGSC*LCLCAH Trigger: ATGAGCACACAGGCACAACCAACAGCTTCCACATTC...GTAAACGCTCTGAGGTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | TCTCCTTCCTTTGCTCATAAGATACATCCTGAAGGAAGACCTCAGAGCGTTTACTTCCAACTGCTGCAGTaGTGTCTTCATAGTCTTCAC | + |
Preference number: 4 (lower is better) Translates to: SPSFAHKIHPEGRPQSVYFQLLQ*CLHSLH Trigger: GTGAAGACTATGAAGACAGCACTGCAGCAGTTGGAA...GTAAACGCTCTGAGGTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | GTTCTAGAGCAGCCCAAGTCATTCAGACAGCCTTTCCTGTGGCTTCCTATTTTATTCTTGAGACAGTTGTaGACTGCAGTAGAGTATGTG | + |
Preference number: 4 (lower is better) Translates to: VLEQPKSFRQPFLWLPILFLRQL*TAVEYV Trigger: CACATACTCTACTGCAGTCCACAACTGTCTCAAGAA...TAAAATAGGAAGCCACAGGAAAGGCTGTCTGAATGACTTGGGCTGCTCTAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR CCA 90 bp | TCTCCTTCCTTTGCTCATAAGATACATCCTGAAGGAAGACCTCAGAGCGTTTACTCCAGATTCCCATTCTaGTTGTGCTCATCTTCTGCA | + |
Preference number: 4 (lower is better) Translates to: SPSFAHKIHPEGRPQSVYSRFPF*LCSSSA Trigger: TGCAGAAGATGAGCACAACCAGAATGGGAATCTGGA...GTAAACGCTCTGAGGTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR GCA 90 bp | TCTCCTTCCTTTGCTCATAAGATACATCCTGAAGGAAGACCTCAGAGCGTTTACTTCATAGTCTTCACTTaGTGGAAATGGCAGGACATG | + |
Preference number: 4 (lower is better) Translates to: SPSFAHKIHPEGRPQSVYFIVFT*WKWQDM Trigger: CATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAA...GTAAACGCTCTGAGGTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CCA 90 bp | TCTCCTTCCTTTGCTCATAAGATACATCCTGAAGGAAGACCTCAGAGCGTTTACTTCTTGAGACAGTTGTaGACTGCAGTAGAGTATGTG | + |
Preference number: 4 (lower is better) Translates to: SPSFAHKIHPEGRPQSVYFLRQL*TAVEYV Trigger: CACATACTCTACTGCAGTCCACAACTGTCTCAAGAA...GTAAACGCTCTGAGGTCTTCCTTCAGGATGTATCTTATGAGCAAAGGAAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GTCCAGAGGCAAGGGATGGGCACAGTGACCACTGAGGGCCTGTGGGTGGGGAGGCAGAGGTCCAGGTTCTaGAGACAGTTGTGGACTGCA | + |
Preference number: 5 (lower is better) Translates to: VQRQGMGTVTTEGLWVGRQRSRF*RQLWTA Trigger: TGCAGTCCACAACTGTCTCAAGAACCTGGACCTCTG...CCTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTTGCCTCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GGAAATCTCTTAGTGGGCCAGTTCGGGGAGAAGGGAGGCAGGAAGGACCTGCTCCCCAGCTCTGCCTCCTaGTCACCCTGGCGGAAGAAC | + |
Preference number: 5 (lower is better) Translates to: GNLLVGQFGEKGGRKDLLPSSAS*SPWRKN Trigger: GTTCTTCCGCCAGGGTGACAAGGAGGCAGAGCTGGG...GAGCAGGTCCTTCCTGCCTCCCTTCTCCCCGAACTGGCCCACTAAGAGATTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GTCCAGAGGCAAGGGATGGGCACAGTGACCACTGAGGGCCTGTGGGTGGGGAGGTCAATGGACATCTGGTaGGTGATGCCACTTGCTGCC | + |
Preference number: 5 (lower is better) Translates to: VQRQGMGTVTTEGLWVGRSMDIW*VMPLAA Trigger: GGCAGCAAGTGGCATCACCAACCAGATGTCCATTGA...CCTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTTGCCTCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GTCCAGAGGCAAGGGATGGGCACAGTGACCACTGAGGGCCTGTGGGTGGGGAGGAGATTCCCATTCTGGTaGTGCTCATCTTCTGCAGGG | + |
Preference number: 5 (lower is better) Translates to: VQRQGMGTVTTEGLWVGRRFPFW*CSSSAG Trigger: CCCTGCAGAAGATGAGCACAACCAGAATGGGAATCT...CCTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTTGCCTCTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GGCATCTCTGACCCTCCCCTCCAAACTGTAGGAAGCCTGCAGGGAGCTTACTCCCTGACCACATCAGGGTaGGGGTCTCCTACGTCCACA | + |
Preference number: 5 (lower is better) Translates to: GISDPPLQTVGSLQGAYSLTTSG*GSPTST Trigger: TGTGGACGTAGGAGACCCCAACCCTGATGTGGTCAG...GGAGTAAGCTCCCTGCAGGCTTCCTACAGTTTGGAGGGGAGGGTCAGAGATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACTTAATCCACATTTTCTaGCTGGGGGCTGACTTCAGC | + |
Preference number: 5 (lower is better) Translates to: LWVLQVATALSPSPSAFHLIHIF*LGADFS Trigger: GCTGAAGTCAGCCCCCAGCAAGAAAATGTGGATTAA...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 |
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CDS-3UTR CAA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGACGATGCTTCGGAACTaGGGTTTCTCTTCTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGTMLRN*GFSSAL Trigger: CAGGGCAGAAGAGAAACCCAAGTTCCGAAGCATCGT...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACAGCACCGATCGATCATaGTACAGGATGGCACATTCT | + |
Preference number: 5 (lower is better) Translates to: LWVLQVATALSPSPSAFHSTDRS*YRMAHS Trigger: AGAATGTGCCATCCTGTACAATGATCGATCGGTGCT...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GTCCAGAGGCAAGGGATGGGCACAGTGACCACTGAGGGCCTGTGGGTGGGGAGGCTTCATAGTCTTCACTaGCTGGAAATGGCAGGACAT | + |
Preference number: 5 (lower is better) Translates to: VQRQGMGTVTTEGLWVGRLHSLH*LEMAGH Trigger: ATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAAG...CCTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTTGCCTCTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACCCCAGCTCTGCCTCCTaGTCACCCTGGCGGAAGAAC | + |
Preference number: 5 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHPSSAS*SPWRKN Trigger: GTTCTTCCGCCAGGGTGACAAGGAGGCAGAGCTGGG...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GTCCAGAGGCAAGGGATGGGCACAGTGACCACTGAGGGCCTGTGGGTGGGGAGGTGTCTAGGATTTGCCTaGTCTCATCAATGTAGACAG | + |
Preference number: 5 (lower is better) Translates to: VQRQGMGTVTTEGLWVGRCLGFA*SHQCRQ Trigger: CTGTCTACATTGATGAGACAAGGCAAATCCTAGACA...CCTCCCCACCCACAGGCCCTCAGTGGTCACTGTGCCCATCCCTTGCCTCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | CTCTGGGTGCTCCAAGTTGCTACCGCCCTGAGCCCCTCCCCATCTGCCTTCCACTGTCTAGGATTTGCCTaGTCTCATCAATGTAGACAG | + |
Preference number: 5 (lower is better) Translates to: LWVLQVATALSPSPSAFHCLGFA*SHQCRQ Trigger: CTGTCTACATTGATGAGACAAGGCAAATCCTAGACA...GTGGAAGGCAGATGGGGAGGGGCTCAGGGCGGTAGCAACTTGGAGCACCCAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GGACAGGAAGAGGCTTTACCTGGCTGCACTCGCTCTGGGTGCTCCAAGTTGCTAACGATGCTTCGGAACTaGGGTTTCTCTTCTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: GQEEALPGCTRSGCSKLLTMLRN*GFSSAL Trigger: CAGGGCAGAAGAGAAACCCAAGTTCCGAAGCATCGT...TAGCAACTTGGAGCACCCAGAGCGAGTGCAGCCAGGTAAAGCCTCTTCCTGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GAGAAGGGAAACCCAGACCTGCCAGCTAAGATCTGGGGTGGGGGACTGAGGGAAGATAGGGCCTTGGACTaGTCAATCCTTTCCAACTGC | + |
Preference number: 5 (lower is better) Translates to: EKGNPDLPAKIWGGGLREDRALD*SILSNC Trigger: GCAGTTGGAAAGGATTGACAAGTCCAAGGCCCTATC...TTCCCTCAGTCCCCCACCCCAGATCTTAGCTGGCAGGTCTGGGTTTCCCTTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGAGAAGAGATAGGGCCTaGGACTTGTCAATCCTTTCC | + |
Preference number: 5 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGRRDRA*DLSILS Trigger: GGAAAGGATTGACAAGTCCAAGGCCCTATCTCTTCT...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS TCA 90 bp | CCTACGTCCACATCTAAAGAAGGCTGGCGCCACTGGAAGCTGGGCTaGCTTTTAGGCTTGGAATCATCATCTGCCAAGGGCTGGACACTC | + |
Preference number: 5 (lower is better) Translates to: PTSTSKEGWRHWKLG*LLGLESSSAKGWTL Trigger: GAGTGTCCAGCCCTTGGCAGATGATGATTCCAAGCCTAAAAGTCAGCCCAGCTTCCAGTGGCGCCAGCCTTCTTTAGATGTGGACGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | CTGCAGGGAGCTTACTCCTCCCAAGTGGCCAAAGGAGGAGTCCAGAGGCAAGGGCTTCATAGTCTTCACTaGCTGGAAATGGCAGGACAT | + |
Preference number: 5 (lower is better) Translates to: LQGAYSSQVAKGGVQRQGLHSLH*LEMAGH Trigger: ATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAAG...CCCTTGCCTCTGGACTCCTCCTTTGGCCACTTGGGAGGAGTAAGCTCCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGACCCAGCTCTGCCTCCTaGTCACCCTGGCGGAAGAAC | + |
Preference number: 5 (lower is better) Translates to: GTEGTPKMYCLETWRQEGPSSAS*SPWRKN Trigger: GTTCTTCCGCCAGGGTGACAAGGAGGCAGAGCTGGG...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS GCA 90 bp | GCGCCACTGGAAGCTGGGCTGACTTTTAGGCTTGGAATCATCATCTaGCAAGGGCTGGACACTCTTTTCTGCCACATCAGTCAGCACAGA | + |
Preference number: 5 (lower is better) Translates to: APLEAGLTFRLGIII*QGLDTLFCHISQHR Trigger: TCTGTGCTGACTGATGTGGCAGAAAAGAGTGTCCAGCCCTTGGCAGATGATGATTCCAAGCCTAAAAGTCAGCCCAGCTTCCAGTGGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | TACATCCTGAAGGAAGACCTCAGAGCGTTTACAGACATTGGTCGGATGAGGGCTCTGACCACATCAGGGTaGGGGTCTCCTACGTCCACA | + |
Preference number: 5 (lower is better) Translates to: YILKEDLRAFTDIGRMRALTTSG*GSPTST Trigger: TGTGGACGTAGGAGACCCCAACCCTGATGTGGTCAG...AGCCCTCATCCGACCAATGTCTGTAAACGCTCTGAGGTCTTCCTTCAGGATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS CCA 90 bp | AGGCTATGCCGAGTCAGCAACTCAAAAACAATGGTCCTCAGAGCGTaGTCATCGGCTGCCCGGTTCAAGGAAAAGACATCAAAGCACCAG | + |
Preference number: 5 (lower is better) Translates to: RLCRVSNSKTMVLRA*SSAARFKEKTSKHQ Trigger: CTGGTGCTTTGATGTCTTTTCCTTGAACCGGGCAGCCGATGACCACGCTCTGAGGACCATTGTTTTTGAGTTGCTGACTCGGCATAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000226493.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | AAAGAAGGCTGGCGCCACTGGAAGCTAGGAATAAGACCCCATACACACACCCAAACGATGCTTCGGAACTaGGGTTTCTCTTCTGCCCTG | + |
Preference number: 5 (lower is better) Translates to: KEGWRHWKLGIRPHTHTQTMLRN*GFSSAL Trigger: CAGGGCAGAAGAGAAACCCAAGTTCCGAAGCATCGT...TTGGGTGTGTGTATGGGGTCTTATTCCTAGCTTCCAGTGGCGCCAGCCTTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR CAA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACGATAGGGCCTTGGACTaGTCAATCCTTTCCAACTGC | + |
Preference number: 5 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHDRALD*SILSNC Trigger: GCAGTTGGAAAGGATTGACAAGTCCAAGGCCCTATC...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS GCA 90 bp | AGTCAGCAACTCAAAAACAATGGTCCTCAGAGCGTGGTCATCGGCTaGCCGGTTCAAGGAAAAGACATCAAAGCACCAGAGGTCCAGGTT | + |
Preference number: 5 (lower is better) Translates to: SQQLKNNGPQSVVIG*PVQGKDIKAPEVQV Trigger: AACCTGGACCTCTGGTGCTTTGATGTCTTTTCCTTGAACCGGGCAGCCGATGACCACGCTCTGAGGACCATTGTTTTTGAGTTGCTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000226493.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | CAAGGGAATGGGGCTGAAGAAGTGCAAGTATGGGATCAAGAGGATGTCCCCCACAGAAGAGATAGGGCCTaGGACTTGTCAATCCTTTCC | + |
Preference number: 5 (lower is better) Translates to: QGNGAEEVQVWDQEDVPHRRDRA*DLSILS Trigger: GGAAAGGATTGACAAGTCCAAGGCCCTATCTCTTCT...GTGGGGGACATCCTCTTGATCCCATACTTGCACTTCTTCAGCCCCATTCCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGACAGAGGTCCAGGTTCTaGAGACAGTTGTGGACTGCA | + |
Preference number: 5 (lower is better) Translates to: GTEGTPKMYCLETWRQEGQRSRF*RQLWTA Trigger: TGCAGTCCACAACTGTCTCAAGAACCTGGACCTCTG...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | CCCTTGGAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAAGCACCGATCGATCATaGTACAGGATGGCACATTCT | + |
Preference number: 5 (lower is better) Translates to: PLEQMGEPVLMDSANDIESTDRS*YRMAHS Trigger: AGAATGTGCCATCCTGTACAATGATCGATCGGTGCT...TTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTCCAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGATCAATGGACATCTGGTaGGTGATGCCACTTGCTGCC | + |
Preference number: 5 (lower is better) Translates to: GTEGTPKMYCLETWRQEGSMDIW*VMPLAA Trigger: GGCAGCAAGTGGCATCACCAACCAGATGTCCATTGA...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | TGGATAGTGCTAATGACATCGAAGACTTTGGACTCAGTGAGGACCTGGTCAGCCAGATTCCCATTCTGGTaGTGCTCATCTTCTGCAGGG | + |
Preference number: 5 (lower is better) Translates to: WIVLMTSKTLDSVRTWSARFPFW*CSSSAG Trigger: CCCTGCAGAAGATGAGCACAACCAGAATGGGAATCT...GGCTGACCAGGTCCTCACTGAGTCCAAAGTCTTCGATGTCATTAGCACTATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS GCA 90 bp | CTCATCAGAAACACTGTGGGAATCTTAAAGCGGCTGATGAGGCTATaGCGAGTCAGCAACTCAAAAACAATGGTCCTCAGAGCGTGGTCA | + |
Preference number: 5 (lower is better) Translates to: LIRNTVGILKRLMRL*RVSNSKTMVLRAWS Trigger: TGACCACGCTCTGAGGACCATTGTTTTTGAGTTGCTGACTCGGCATAGCCTCATCAGCCGCTTTAAGATTCCCACAGTGTTTCTGATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS GCA 90 bp | TTTAGGCTTGGAATCATCATCTGCCAAGGGCTGGACACTCTTTTCTaGCACATCAGTCAGCACAGAGAAGGTTGGCTCCACAATGAAGTC | + |
Preference number: 5 (lower is better) Translates to: FRLGIIICQGLDTLF*HISQHREGWLHNEV Trigger: GACTTCATTGTGGAGCCAACCTTCTCTGTGCTGACTGATGTGGCAGAAAAGAGTGTCCAGCCCTTGGCAGATGATGATTCCAAGCCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS CCA 90 bp | ATCCTTTCCAACTGCTGCAGTGCTGTCTTCATAGTCTTCACTTGCTaGAAATGGCAGGACATGTCTGTGGCCAACACCATCTCGATAACC | + |
Preference number: 5 (lower is better) Translates to: ILSNCCSAVFIVFTC*KWQDMSVANTISIT Trigger: GGTTATCGAGATGGTGTTGGCCACAGACATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAAGACAGCACTGCAGCAGTTGGAAAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | GCACGGAAACTGACCACATCAGGGTTGGGGTCTCCTACGTCCACATCTAAAGAACTTCATAGTCTTCACTaGCTGGAAATGGCAGGACAT | + |
Preference number: 5 (lower is better) Translates to: ARKLTTSGLGSPTSTSKELHSLH*LEMAGH Trigger: ATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAAG...TTCTTTAGATGTGGACGTAGGAGACCCCAACCCTGATGTGGTCAGTTTCCGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR CAA 90 bp | GAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAGACTTTTTAATCCACATTTTCTaGCTGGGGGCTGACTTCAGC | + |
Preference number: 5 (lower is better) Translates to: EQMGEPVLMDSANDIEDFLIHIF*LGADFS Trigger: GCTGAAGTCAGCCCCCAGCAAGAAAATGTGGATTAA...AAAGTCTTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 |
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CDS-3UTR CAA 90 bp | GGGACTGAGGGAACCCCCAAAATGTATTGCTTAGAAACTTGGAGGCAAGAAGGAAGCACCGATCGATCATaGTACAGGATGGCACATTCT | + |
Preference number: 5 (lower is better) Translates to: GTEGTPKMYCLETWRQEGSTDRS*YRMAHS Trigger: AGAATGTGCCATCCTGTACAATGATCGATCGGTGCT...TCCTTCTTGCCTCCAAGTTTCTAAGCAATACATTTTGGGGGTTCCCTCAGTCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | ATACACACACCCAATTCCAGATATAAGACCCAACCCTCTTCAGAACCTACTTCTCAGAGGTCCAGGTTCTaGAGACAGTTGTGGACTGCA | + |
Preference number: 5 (lower is better) Translates to: IHTPNSRYKTQPSSEPTSQRSRF*RQLWTA Trigger: TGCAGTCCACAACTGTCTCAAGAACCTGGACCTCTG...AGAAGTAGGTTCTGAAGAGGGTTGGGTCTTATATCTGGAATTGGGTGTGTGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS-3UTR CAA 90 bp | GAGCAGATGGGGGAACCAGTCCTGATGGATAGTGCTAATGACATCGAAGACTTTTGTCTAGGATTTGCCTaGTCTCATCAATGTAGACAG | + |
Preference number: 5 (lower is better) Translates to: EQMGEPVLMDSANDIEDFCLGFA*SHQCRQ Trigger: CTGTCTACATTGATGAGACAAGGCAAATCCTAGACA...AAAGTCTTCGATGTCATTAGCACTATCCATCAGGACTGGTTCCCCCATCTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS-3UTR CAA 90 bp | ATACACACACCCAATTCCAGATATAAGACCCAACCCTCTTCAGAACCTACTTCTGATAGGGCCTTGGACTaGTCAATCCTTTCCAACTGC | + |
Preference number: 5 (lower is better) Translates to: IHTPNSRYKTQPSSEPTSDRALD*SILSNC Trigger: GCAGTTGGAAAGGATTGACAAGTCCAAGGCCCTATC...AGAAGTAGGTTCTGAAGAGGGTTGGGTCTTATATCTGGAATTGGGTGTGTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226468.2 |
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CDS CCA 72 bp | AGGCAGTGCACCATGCCTGTGCGGAGAAGGAAGCAATaGACAGTCTGGGTCACGTCGGCTGCGTGGATCTGG | + |
Preference number: 6 (lower is better) Translates to: RQCTMPVRRRKQ*TVWVTSAAWIW Trigger: CCAGATCCACGCAGCCGACGTGACCCAGACTGTCCATTGCTTCCTTCTCCGCACAGGCATGGTGCACTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS GCA 72 bp | AGCATGCACGATGCTTCGGAACTTGGGTTTCTCTTCTaGCCTGCGACCTTTGGCTCGGGTCTGCTGGGTGAA | + |
Preference number: 6 (lower is better) Translates to: SMHDASELGFLF*PATFGSGLLGE Trigger: TTCACCCAGCAGACCCGAGCCAAAGGTCGCAGGGCAGAAGAGAAACCCAAGTTCCGAAGCATCGTGCATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000226493.2 ENSMUST00000227955.2 |
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CDS TCA 72 bp | GGCTGCAGCAAAGATGATGGCCAAGACCTCAATCTCTaGCAGGCAGTGCACCATGCCTGTGCGGAGAAGGAA | + |
Preference number: 6 (lower is better) Translates to: GCSKDDGQDLNL*QAVHHACAEKE Trigger: TTCCTTCTCCGCACAGGCATGGTGCACTGCCTGTCAGAGATTGAGGTCTTGGCCATCATCTTTGCTGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS CCA 72 bp | TCTTCCTCACAGGGGGACAGTTCATCAATGGACATCTaGTTGGTGATGCCACTTGCTGCCCGTTCCTTCCAC | + |
Preference number: 6 (lower is better) Translates to: SSSQGDSSSMDI*LVMPLAARSFH Trigger: GTGGAAGGAACGGGCAGCAAGTGGCATCACCAACCAGATGTCCATTGATGAACTGTCCCCCTGTGAGGAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS CCA 72 bp | TCAAAGCACCAGAGGTCCAGGTTCTTGAGACAGTTGTaGACTGCAGTAGAGTATGTGGGGCCCACAGAGGTA | + |
Preference number: 6 (lower is better) Translates to: SKHQRSRFLRQL*TAVEYVGPTEV Trigger: TACCTCTGTGGGCCCCACATACTCTACTGCAGTCCACAACTGTCTCAAGAACCTGGACCTCTGGTGCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000226493.2 ENSMUST00000227955.2 |
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CDS CAA 90 bp | GGTGATGCCACTTGCTGCCCGTTCCTTCCACTTCTGTTTGTTCTCTaGAATGTACTTGGTCCAGGTGGCACGGAAACTGACCACATCAGG | + |
Preference number: 6 (lower is better) Translates to: GDATCCPFLPLLFVL*NVLGPGGTETDHIR Trigger: CCTGATGTGGTCAGTTTCCGTGCCACCTGGACCAAGTACATTCAAGAGAACAAACAGAAGTGGAAGGAACGGGCAGCAAGTGGCATCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS GCA 72 bp | CTCAAAAACAATGGTCCTCAGAGCGTGGTCATCGGCTaGCCGGTTCAAGGAAAAGACATCAAAGCACCAGAG | + |
Preference number: 6 (lower is better) Translates to: LKNNGPQSVVIG*PVQGKDIKAPE Trigger: CTCTGGTGCTTTGATGTCTTTTCCTTGAACCGGGCAGCCGATGACCACGCTCTGAGGACCATTGTTTTTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000226493.2 ENSMUST00000227955.2 |
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CDS GCA 72 bp | TCCAACTGCTGCAGTGCTGTCTTCATAGTCTTCACTTaGTGGAAATGGCAGGACATGTCTGTGGCCAACACC | + |
Preference number: 6 (lower is better) Translates to: SNCCSAVFIVFT*WKWQDMSVANT Trigger: GGTGTTGGCCACAGACATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAAGACAGCACTGCAGCAGTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS CCA 72 bp | CGAGTCAGCAACTCAAAAACAATGGTCCTCAGAGCGTaGTCATCGGCTGCCCGGTTCAAGGAAAAGACATCA | + |
Preference number: 6 (lower is better) Translates to: RVSNSKTMVLRA*SSAARFKEKTS Trigger: TGATGTCTTTTCCTTGAACCGGGCAGCCGATGACCACGCTCTGAGGACCATTGTTTTTGAGTTGCTGACTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000226493.2 ENSMUST00000227955.2 |
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CDS GCA 72 bp | GAAGCTGGGCTGACTTTTAGGCTTGGAATCATCATCTaGCAAGGGCTGGACACTCTTTTCTGCCACATCAGT | + |
Preference number: 6 (lower is better) Translates to: EAGLTFRLGIII*QGLDTLFCHIS Trigger: ACTGATGTGGCAGAAAAGAGTGTCCAGCCCTTGGCAGATGATGATTCCAAGCCTAAAAGTCAGCCCAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023132.5 ENSMUST00000227955.2 |
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CDS CCA 72 bp | AACTGCTGCAGTGCTGTCTTCATAGTCTTCACTTGCTaGAAATGGCAGGACATGTCTGTGGCCAACACCATC | + |
Preference number: 6 (lower is better) Translates to: NCCSAVFIVFTC*KWQDMSVANTI Trigger: GATGGTGTTGGCCACAGACATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAAGACAGCACTGCAGCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS CCA 72 bp | TGCAGTGCTGTCTTCATAGTCTTCACTTGCTGGAAATaGCAGGACATGTCTGTGGCCAACACCATCTCGATA | + |
Preference number: 6 (lower is better) Translates to: CSAVFIVFTCWK*QDMSVANTISI Trigger: TATCGAGATGGTGTTGGCCACAGACATGTCCTGCCATTTCCAGCAAGTGAAGACTATGAAGACAGCACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS CAA 72 bp | GTTCCCGAAGCTCATCTTCAGTGTCTAGGATTTGCCTaGTCTCATCAATGTAGACAGCTTCCAGCAGGGAAG | + |
Preference number: 6 (lower is better) Translates to: VPEAHLQCLGFA*SHQCRQLPAGK Trigger: CTTCCCTGCTGGAAGCTGTCTACATTGATGAGACAAGGCAAATCCTAGACACTGAAGATGAGCTTCGGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000226493.2 ENSMUST00000227955.2 |
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CDS CAA 90 bp | CTGACCGAAGTTCCCGAAGCTCATCTTCAGTGTCTAGGATTTGCCTaGTCTCATCAATGTAGACAGCTTCCAGCAGGGAAGCTGTGTATT | + |
Preference number: 6 (lower is better) Translates to: LTEVPEAHLQCLGFA*SHQCRQLPAGKLCI Trigger: AATACACAGCTTCCCTGCTGGAAGCTGTCTACATTGATGAGACAAGGCAAATCCTAGACACTGAAGATGAGCTTCGGGAACTTCGGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000226493.2 ENSMUST00000227955.2 |
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CDS TCA 72 bp | TCATCCTGCATCATTCGAAAGACAGAGCTGATGTGGTaGTTCTCCAGCACCGATCGATCATTGTACAGGATG | + |
Preference number: 6 (lower is better) Translates to: SSCIIRKTELMW*FSSTDRSLYRM Trigger: CATCCTGTACAATGATCGATCGGTGCTGGAGAATCACCACATCAGCTCTGTCTTTCGAATGATGCAGGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS GCA 72 bp | AACACTGTGGGAATCTTAAAGCGGCTGATGAGGCTATaGCGAGTCAGCAACTCAAAAACAATGGTCCTCAGA | + |
Preference number: 6 (lower is better) Translates to: NTVGILKRLMRL*RVSNSKTMVLR Trigger: TCTGAGGACCATTGTTTTTGAGTTGCTGACTCGGCATAGCCTCATCAGCCGCTTTAAGATTCCCACAGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS CAA 72 bp | TCGATAACCAGGGCCCGCAGCTCTGCAAATTCATCCTaGGTGAGATTGATAAAAATGTTCATCTCATCATCC | + |
Preference number: 6 (lower is better) Translates to: SITRARSSANSS*VRLIKMFISSS Trigger: GGATGATGAGATGAACATTTTTATCAATCTCACCAAGGATGAATTTGCAGAGCTGCGGGCCCTGGTTATCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS CAA 90 bp | TCGATAACCAGGGCCCGCAGCTCTGCAAATTCATCCTTGGTGAGATaGATAAAAATGTTCATCTCATCATCCTGCATCATTCGAAAGACA | + |
Preference number: 6 (lower is better) Translates to: SITRARSSANSSLVR*IKMFISSSCIIRKT Trigger: TGTCTTTCGAATGATGCAGGATGATGAGATGAACATTTTTATCAATCTCACCAAGGATGAATTTGCAGAGCTGCGGGCCCTGGTTATCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS CAA 90 bp | AACACCATCTCGATAACCAGGGCCCGCAGCTCTGCAAATTCATCCTaGGTGAGATTGATAAAAATGTTCATCTCATCATCCTGCATCATT | + |
Preference number: 6 (lower is better) Translates to: NTISITRARSSANSS*VRLIKMFISSSCII Trigger: AATGATGCAGGATGATGAGATGAACATTTTTATCAATCTCACCAAGGATGAATTTGCAGAGCTGCGGGCCCTGGTTATCGAGATGGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |
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CDS CAA 72 bp | AGGGCCCGCAGCTCTGCAAATTCATCCTTGGTGAGATaGATAAAAATGTTCATCTCATCATCCTGCATCATT | + |
Preference number: 6 (lower is better) Translates to: RARSSANSSLVR*IKMFISSSCII Trigger: AATGATGCAGGATGATGAGATGAACATTTTTATCAATCTCACCAAGGATGAATTTGCAGAGCTGCGGGCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023132.5 ENSMUST00000226468.2 ENSMUST00000227955.2 |