Pregenerated sensors for PDE1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059173Ensembl transcript IDs: ENSMUST00000090756.11, ENSMUST00000102651.10, ENSMUST00000102652.10, ENSMUST00000102653.8, ENSMUST00000102654.11, ENSMUST00000102655.10, ENSMUST00000134739.2, ENSMUST00000183775.8
Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAGTGTGCCTCCCCAGCTACCCCTGCAAGTCGGTTGGTCACAGTaGTCTGTAAGTCACATAGCCTGGACAATTAGGCTAGCAGACATA | + |
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Preference number: 1 (lower is better) Translates to: SSVPPQLPLQVGWSQ*SVSHIAWTIRLADI Trigger: TATGTCTGCTAGCCTAATTGTCCAGGCTATGTGACTTACAGAGCACTGTGACCAACCGACTTGCAGGGGTAGCTGGGGAGGCACACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR CCA 90 bp | CAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATaGCTGATGTTCCTTGTTACATTGGCCCTACAGCAAACTGCGACC | + |
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Preference number: 1 (lower is better) Translates to: QKENSVFSLSALLLQ*LMFLVTLALQQTAT Trigger: GGTCGCAGTTTGCTGTAGGGCCAATGTAACAAGGAACATCAGCCATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR GCA 90 bp | AGTGGTAACAACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTaGCCTTCTCCTGCAATGGCTGATGTTCCTTGTTACATTGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: SGNNIPEGKFCLLFE*PSPAMADVPCYIGP Trigger: AGGGCCAATGTAACAAGGAACATCAGCCATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTTGTTACCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR CCA 90 bp | AAGTTCTGGCTAAATGAAAAGGCAGATGAACTCGCAAGTATATGGTaGGTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: KFWLNEKADELASIW*VTVSTNAKHVQQPL Trigger: CAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCATATACTTGCGAGTTCATCTGCCTTTTCATTTAGCCAGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR CCA 90 bp | GTAAAGTTCTGGCTAAATGAAAAGGCAGATGAACTCGCAAGTATATaGTGGGTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: VKFWLNEKADELASI*WVTVSTNAKHVQQP Trigger: AGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCATATACTTGCGAGTTCATCTGCCTTTTCATTTAGCCAGAACTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR GCA 90 bp | CTGTACAGAAAAGTATGTGTTTCCATATACACCTCTGAGCACGAGTaGACACATCTACAACATACACACACACAGACACACAGACACACA | + |
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Preference number: 1 (lower is better) Translates to: LYRKVCVSIYTSEHE*THLQHTHTQTHRHT Trigger: TGTGTGTCTGTGTGTCTGTGTGTGTGTATGTTGTAGATGTGTGCACTCGTGCTCAGAGGTGTATATGGAAACACATACTTTTCTGTACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 |
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| 3UTR GCA 90 bp | AGGAACATTTATTGGCACTCGCCGTGTCACCTCAGCAAAGAGAGGTaGCACAAAATACTATTTGCACCAATATTTGAAGGCATAAAGATC | + |
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Preference number: 1 (lower is better) Translates to: RNIYWHSPCHLSKER*HKILFAPIFEGIKI Trigger: GATCTTTATGCCTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACGGCGAGTGCCAATAAATGTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| 3UTR TCA 90 bp | ACAGTTTTAGCTGTACAGAAAAGTATGTGTTTCCATATACACCTCTaGGCACGAGTGCACACATCTACAACATACACACACACAGACACA | + |
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Preference number: 1 (lower is better) Translates to: TVLAVQKSMCFHIHL*ARVHTSTTYTHTDT Trigger: TGTGTCTGTGTGTGTGTATGTTGTAGATGTGTGCACTCGTGCTCAGAGGTGTATATGGAAACACATACTTTTCTGTACAGCTAAAACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 |
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| 3UTR TCA 90 bp | ATCCTAATGATAACTCGTGGGAACTTTGTGGCTCAGTTACTAGACTaGAATTTATGCTTTTCTTCCTTACAGAGGAGTCCACTAAAATGG | + |
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Preference number: 1 (lower is better) Translates to: ILMITRGNFVAQLLD*NLCFSSLQRSPLKW Trigger: CCATTTTAGTGGACTCCTCTGTAAGGAAGAAAAGCATAAATTTCAGTCTAGTAACTGAGCCACAAAGTTCCCACGAGTTATCATTAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR TCA 90 bp | TGTTCATTCCATCTAATTGTCACCTTTCACGAAGTTCGCAATCCCTaGACTGTATGTACAGTGAAAATACTACAACATCTAATTGGGCTT | + |
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Preference number: 1 (lower is better) Translates to: CSFHLIVTFHEVRNP*TVCTVKILQHLIGL Trigger: AAGCCCAATTAGATGTTGTAGTATTTTCACTGTACATACAGTTCAGGGATTGCGAACTTCGTGAAAGGTGACAATTAGATGGAATGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR TCA 90 bp | GTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCAAGAAGCAGGGCCTCTaGGGGTTGCAGTTCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: VSTNAKHVQQPLERDSPAKKQGL*GLQFIS Trigger: AGAAATGAACTGCAACCCTCAGAGGCCCTGCTTCTT...GGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGGTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGATGCTCAGGCAAAACATaGCCAAGAAGCAGGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: WWVTVSTNAKHVQQPLERCSGKT*PRSRAS Trigger: AGAGGCCCTGCTTCTTGGTCATGTTTTGCCTGAGCA...TCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR CCA 90 bp | AGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTGGCCTTTGTTGTTGCGTCACTCTaGAGTAACACAGTGCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: SMCSSLWREIVPPHGVAFVVASL*SNTVQV Trigger: AACTTGCACTGTGTTACTCCAGAGTGACGCAACAAC...AAAGGCCACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCGACTTCAGGAGAAGATaGCACTGTAGTTTCCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: VSTNAKHVQQPLERDSPADFRRR*HCSFPA Trigger: AGCTGGGAAACTACAGTGCCATCTTCTCCTGAAGTC...GGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGATGCCTTAAAACTCAGTaGATGGCTGCAGGATGGTCG | + |
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Preference number: 2 (lower is better) Translates to: WWVTVSTNAKHVQQPLERCLKTQ*MAAGWS Trigger: CGACCATCCTGCAGCCATCCACTGAGTTTTAAGGCA...TCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR CCA 90 bp | GTCGGTTGGTCACAGTGCTCTGTAAGTCACATAGCCTGGACAATTAGGCTAGCATGCCTTAAAACTCAGTaGATGGCTGCAGGATGGTCG | + |
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Preference number: 2 (lower is better) Translates to: VGWSQCSVSHIAWTIRLACLKTQ*MAAGWS Trigger: CGACCATCCTGCAGCCATCCACTGAGTTTTAAGGCA...TGCTAGCCTAATTGTCCAGGCTATGTGACTTACAGAGCACTGTGACCAACCGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTAAAACTCAGTGGATGGCTGCAGGATGGTCGATGACTTCAGGAGAAGATTTCATCCAATCACTGTaGGGCAGGTCTTACGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: CLKTQWMAAGWSMTSGEDFIQSL*GRSYGQ Trigger: CTGACCGTAAGACCTGCCGCACAGTGATTGGATGAA...ATCTTCTCCTGAAGTCATCGACCATCCTGCAGCCATCCACTGAGTTTTAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR TCA 90 bp | GTCGGTTGGTCACAGTGCTCTGTAAGTCACATAGCCTGGACAATTAGGCTAGCATTCTCCTGCAATGGCTaGTGTTCCTTGTTACATTGG | + |
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Preference number: 2 (lower is better) Translates to: VGWSQCSVSHIAWTIRLAFSCNG*CSLLHW Trigger: CCAATGTAACAAGGAACATCAGCCATTGCAGGAGAA...TGCTAGCCTAATTGTCCAGGCTATGTGACTTACAGAGCACTGTGACCAACCGAC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGGTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAATTCTGTCTTCTCTTTaGGTGCCCTTCTCCTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: WWVTVSTNAKHVQQPLERILSSL*VPFSCN Trigger: ATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAAT...TCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAAAAGAAGCAGGGCCTCTaGGGGTTGCAGTTCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKKKQGL*GLQFIS Trigger: AGAAATGAACTGCAACCCTCAGAGGCCCTGCTTCTT...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | AGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTGGCCTTTTCTTCTTGTTGTCCTTaGTTGTTGACAATTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: SMCSSLWREIVPPHGVAFSSCCP*LLTIVL Trigger: CAACACAATTGTCAACAAGCAAGGACAACAAGAAGA...AAAGGCCACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGTTGTTGCGTCACTCTaGAGTAACACAGTGCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: WWVTVSTNAKHVQQPLERVVASL*SNTVQV Trigger: AACTTGCACTGTGTTACTCCAGAGTGACGCAACAAC...TCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR CAA 90 bp | TGCCACAAAATACTATTTGCACCAATATTTGAAGGCATAAAGATCTaGATGCCGCAGCCACCAGGAGGTCTAGTCCATGCCAGAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: CHKILFAPIFEGIKI*MPQPPGGLVHAREA Trigger: GGCTTCTCTGGCATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAATAGTATTTTGTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGACCTCTGAGCACGAGTaGACACATCTACAACATACA | + |
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Preference number: 2 (lower is better) Translates to: KEGVWKAKGKISDTLGIVTSEHE*THLQHT Trigger: TGTATGTTGTAGATGTGTGCACTCGTGCTCAGAGGT...CACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGCCCTCTCTGAAATATTaGTTAGCCTTGAGGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: KEGVWKAKGKISDTLGIVPSLKY*LALRNL Trigger: CAGGTTCCTCAAGGCTAAGCAATATTTCAGAGAGGG...CACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTCCCTCTCTGAAATATTaGTTAGCCTTGAGGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: EGRSVEGQRQNIRHIGHRPSLKY*LALRNL Trigger: CAGGTTCCTCAAGGCTAAGCAATATTTCAGAGAGGG...ACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCATGGAAGGAAAACCATaGCAAAAACAGTGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: RKEGVWKAKGKISDTLGIMEGKP*QKQWPG Trigger: TCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCAT...GATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAAAGGGAGTTCTCCTGCAATGGCTaGTGTTCCTTGTTACATTGG | + |
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Preference number: 2 (lower is better) Translates to: QRQNIRHIGHRGDRKKREFSCNG*CSLLHW Trigger: CCAATGTAACAAGGAACATCAGCCATTGCAGGAGAA...CTCCCTTTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGACATCTAATTGGGCTTaGCCATTCCTGTTAGCTACT | + |
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Preference number: 2 (lower is better) Translates to: KEGVWKAKGKISDTLGIVTSNWA*PFLLAT Trigger: AGTAGCTAACAGGAATGGTCAAGCCCAATTAGATGT...CACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGAGGAGGTCTAGTCCATaGCAGAGAAGCCAGGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: VTSAKRGATKYYLHQYLKRRSSP*QRSQVN Trigger: GTTGACCTGGCTTCTCTGGCATGGACTAGACCTCCT...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCTTCTTGTTGTCCTTaGTTGTTGACAATTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: VSTNAKHVQQPLERDSPASSCCP*LLTIVL Trigger: CAACACAATTGTCAACAAGCAAGGACAACAAGAAGA...GGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | GCGAGAAGCAACTCATTAGGATGGGTGAACCTTTCTGCACATCACCTAATTGACACCTCTGAGCACGAGTaGACACATCTACAACATACA | + |
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Preference number: 2 (lower is better) Translates to: ARSNSLGWVNLSAHHLIDTSEHE*THLQHT Trigger: TGTATGTTGTAGATGTGTGCACTCGTGCTCAGAGGT...GTCAATTAGGTGATGTGCAGAAAGGTTCACCCATCCTAATGAGTTGCTTCTCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 |
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| 3UTR-3UTR CCA 90 bp | CAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAAAGGGAGATGGAAGGAAAACCATaGCAAAAACAGTGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QRQNIRHIGHRGDRKKREMEGKP*QKQWPG Trigger: TCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCAT...CTCCCTTTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR TCA 90 bp | TGCCTTAAAACTCAGTGGATGGCTGCAGGATGGTCGATGACTTCAGGAGAAGATTTTCTCTGGCTAAGATaGCCAAATCATGGAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: CLKTQWMAAGWSMTSGEDFLWLR*PNHGRK Trigger: TTTCCTTCCATGATTTGGTCATCTTAGCCAGAGAAA...ATCTTCTCCTGAAGTCATCGACCATCCTGCAGCCATCCACTGAGTTTTAAGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTGTGGAGAGAGGAAGGTCTTCTTGTTGTCCTTaGTTGTTGACAATTGTGTTG | + |
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Preference number: 2 (lower is better) Translates to: CDPYLLSSSRSCPVERGRSSCCP*LLTIVL Trigger: CAACACAATTGTCAACAAGCAAGGACAACAAGAAGA...CCTTCCTCTCTCCACAGGACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGATGGGTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCTTCATCCAATCACTGTaGGGCAGGTCTTACGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LGWVNLSAHHLIDSNCSFFIQSL*GRSYGQ Trigger: CTGACCGTAAGACCTGCCGCACAGTGATTGGATGAA...GAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCACCCATCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | TGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGGGCCTCTGAGGGTTaGAGTTCATTTCTCTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: CIFGGSCDLQCDPYLLSSRASEG*SSFLFS Trigger: ACTGAAGAGAAATGAACTGCAACCCTCAGAGGCCCT...GGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTGGCCTTTCACACCATTATCTGTATATTTGGAGGCTCATGTGATCTCCAGTCCCTCTCTGAAATATTaGTTAGCCTTGAGGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: VWPFTPLSVYLEAHVISSPSLKY*LALRNL Trigger: CAGGTTCCTCAAGGCTAAGCAATATTTCAGAGAGGG...ACTGGAGATCACATGAGCCTCCAAATATACAGATAATGGTGTGAAAGGCCACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATGGCTGATGTTCGTTGTTGCGTCACTCTaGAGTAACACAGTGCAAGTT | + |
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Preference number: 2 (lower is better) Translates to: KENSVFSLSALLLQWLMFVVASL*SNTVQV Trigger: AACTTGCACTGTGTTACTCCAGAGTGACGCAACAAC...GAACATCAGCCATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTGGCCTTTCACACCATTATCTGTATATTTGGAGGCTCATGTGATCTCCAGTAGGAAGGAAGGAGTGTaGAAGGCCAAAGGCAAAATA | + |
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Preference number: 2 (lower is better) Translates to: VWPFTPLSVYLEAHVISSRKEGV*KAKGKI Trigger: TATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCT...ACTGGAGATCACATGAGCCTCCAAATATACAGATAATGGTGTGAAAGGCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGTGTTTTTCATGCTaGTTTCATTTTCCTGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: RKEGVWKAKGKISDTLGIVCFSC*FHFPVV Trigger: CACAACAGGAAAATGAAAGCAGCATGAAAAACACAC...GATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGTGTGTTTTTCATGCTaGTTTCATTTTCCTGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EGRSVEGQRQNIRHIGHRVCFSC*FHFPVV Trigger: CACAACAGGAAAATGAAAGCAGCATGAAAAACACAC...ACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGTTACCAGATCAGCATTaGAAGAAAACAGGGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: KEGVWKAKGKISDTLGIVLPDQH*KKTGFS Trigger: TGAAAACCCTGTTTTCTTGCAATGCTGATCTGGTAA...CACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTACACATTGGGCATCGTaGAGACAGGAAGAAAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: SVYLEAHVISSVTPTYYLTHWAS*RQEEKG Trigger: TCCCTTTTCTTCCTGTCTCCACGATGCCCAATGTGT...AAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGTATGTACAGTGAAAATACTACAACATCTAATTGGGCTTGACCATTCCTGTAAGAAGCAGGGCCTCTaGGGGTTGCAGTTCATTTCT | + |
|
Preference number: 2 (lower is better) Translates to: TVCTVKILQHLIGLDHSCKKQGL*GLQFIS Trigger: AGAAATGAACTGCAACCCTCAGAGGCCCTGCTTCTT...ACAGGAATGGTCAAGCCCAATTAGATGTTGTAGTATTTTCACTGTACATACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCCTTAAAACTCAGTGGATGGCTGCAGGATGGTCGATGACTTCAGGAGAAGATTCTGGAGTAACACAGTaGAAGTTGTATATTGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: CLKTQWMAAGWSMTSGEDSGVTQ*KLYIEI Trigger: GATTTCAATATACAACTTGCACTGTGTTACTCCAGA...ATCTTCTCCTGAAGTCATCGACCATCCTGCAGCCATCCACTGAGTTTTAAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTTCTTGTCATGTCCCTCTCTGAAATATTGCTTAGCCTTGAGGAACCTGGGTTACCAGATCAGCATTaGAAGAAAACAGGGTTTTCA | + |
|
Preference number: 2 (lower is better) Translates to: KLLVMSLSEILLSLEEPGLPDQH*KKTGFS Trigger: TGAAAACCCTGTTTTCTTGCAATGCTGATCTGGTAA...CCCAGGTTCCTCAAGGCTAAGCAATATTTCAGAGAGGGACATGACAAGAAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTAAGATGACCAAATCATaGAAGGAAAACCATGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VTVSTNAKHVQQPLERDSKMTKS*KENHGK Trigger: TTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTT...ACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTATGTACAGTGAAAATACTACAACATCTAATTGGGCTTGACCATTCCTGTTGCCTTAAAACTCAGTaGATGGCTGCAGGATGGTCG | + |
|
Preference number: 2 (lower is better) Translates to: TVCTVKILQHLIGLDHSCCLKTQ*MAAGWS Trigger: CGACCATCCTGCAGCCATCCACTGAGTTTTAAGGCA...ACAGGAATGGTCAAGCCCAATTAGATGTTGTAGTATTTTCACTGTACATACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACGAAGTTCGCAATCCCTGAACTGTATGTACAGTGAAAATACTACAACATCTGCCCTTCTCCTGCAATaGCTGATGTTCCTTGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: SRSSQSLNCMYSENTTTSALLLQ*LMFLVT Trigger: TGTAACAAGGAACATCAGCCATTGCAGGAGAAGGGC...AGATGTTGTAGTATTTTCACTGTACATACAGTTCAGGGATTGCGAACTTCGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATGGCTGATGTTCGCTCAGTTACTAGACTaGAATTTATGCTTTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KENSVFSLSALLLQWLMFAQLLD*NLCFSS Trigger: GGAAGAAAAGCATAAATTTCAGTCTAGTAACTGAGC...GAACATCAGCCATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR TCA 90 bp | AACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATGAAAATGATGAAAACTTaGAAGCATCCAGCTTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: NIPEGKFCLLFECPSPAMKMMKT*KHPAFS Trigger: GCTGAAAGCTGGATGCTTTCAAGTTTTCATCATTTT...CATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR GCA 90 bp | TCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGGTGTGTTTTTCATGCTaGTTTCATTTTCCTGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SWKENHGKNSGQDPNDNSVCFSC*FHFPVV Trigger: CACAACAGGAAAATGAAAGCAGCATGAAAAACACAC...CGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAATCTGGAGTAACACAGTaGAAGTTGTATATTGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKSGVTQ*KLYIEI Trigger: GATTTCAATATACAACTTGCACTGTGTTACTCCAGA...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTTCTGGAGTAACACAGTaGAAGTTGTATATTGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: VTVSTNAKHVQQPLERDSSGVTQ*KLYIEI Trigger: GATTTCAATATACAACTTGCACTGTGTTACTCCAGA...ACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGTGGCCTTTCACACCATTATCTGTATATTTGGAGGCTCATGTGATCTCCAGTAAGATGACCAAATCATaGAAGGAAAACCATGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: VWPFTPLSVYLEAHVISSKMTKS*KENHGK Trigger: TTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTT...ACTGGAGATCACATGAGCCTCCAAATATACAGATAATGGTGTGAAAGGCCACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTATGTACAGTGAAAATACTACAACATCTAATTGGGCTTGACCATTCCTGTGCCCTTCTCCTGCAATaGCTGATGTTCCTTGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: TVCTVKILQHLIGLDHSCALLLQ*LMFLVT Trigger: TGTAACAAGGAACATCAGCCATTGCAGGAGAAGGGC...ACAGGAATGGTCAAGCCCAATTAGATGTTGTAGTATTTTCACTGTACATACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCCATCTAATTATTCTGTCTTCTCTTTaGGTGCCCTTCTCCTGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: VNLSAHHLIDSNCSFHLIILSSL*VPFSCN Trigger: ATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAAT...AATTAGATGGAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTAGATTCTAGCTTTACTGAAAGACAACTGGCTCAATTAGGAACAATAGTAGCCCTTCTCCTGCAATaGCTGATGTTCCTTGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: SLDSSFTERQLAQLGTIVALLLQ*LMFLVT Trigger: TGTAACAAGGAACATCAGCCATTGCAGGAGAAGGGC...TACTATTGTTCCTAATTGAGCCAGTTGTCTTTCAGTAAAGCTAGAATCTAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGTTGCGTCACTCTGGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCGCTCAGTTACTAGACTaGAATTTATGCTTTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: LLRHSGVTQCKLYIEIHSAQLLD*NLCFSS Trigger: GGAAGAAAAGCATAAATTTCAGTCTAGTAACTGAGC...GGAATGGATTTCAATATACAACTTGCACTGTGTTACTCCAGAGTGACGCAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACGAAGTTCGCAATCCCTGAACTGTATGTACAGTGAAAATACTACAACATCTTTTCTCTGGCTAAGATaGCCAAATCATGGAAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SRSSQSLNCMYSENTTTSFLWLR*PNHGRK Trigger: TTTCCTTCCATGATTTGGTCATCTTAGCCAGAGAAA...AGATGTTGTAGTATTTTCACTGTACATACAGTTCAGGGATTGCGAACTTCGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTAAAATGATGAAAACTTaGAAGCATCCAGCTTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SVYLEAHVISSVTPTYYLKMMKT*KHPAFS Trigger: GCTGAAAGCTGGATGCTTTCAAGTTTTCATCATTTT...AAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR CAA 90 bp | GTTTGTTTTTCTTCTTGTTGTCCTTGCTTGTTGACAATTGTGTTGTaGCGTCACTCTGGAGTAACACAGTGCAAGTTGTATATTGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: VCFSSCCPCLLTIVL*RHSGVTQCKLYIEI Trigger: GATTTCAATATACAACTTGCACTGTGTTACTCCAGAGTGACGCAACAACACAATTGTCAACAAGCAAGGACAACAAGAAGAAAAACAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAATAGATGTATTGTCTACGCCATGAGAGGAGCAGAGCTTCATTTTATTCTTGCTCAGTTACTAGACTaGAATTTATGCTTTTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QNRCIVYAMRGAELHFILAQLLD*NLCFSS Trigger: GGAAGAAAAGCATAAATTTCAGTCTAGTAACTGAGC...AAGAATAAAATGAAGCTCTGCTCCTCTCATGGCGTAGACAATACATCTATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCCATCTAATTAAAATGATGAAAACTTaGAAGCATCCAGCTTTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VNLSAHHLIDSNCSFHLIKMMKT*KHPAFS Trigger: GCTGAAAGCTGGATGCTTTCAAGTTTTCATCATTTT...AATTAGATGGAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAATAGATGTATTGTCTACGCCATGAGAGGAGCAGAGCTTCATTTTATTCTTGTGTGTTTTTCATGCTaGTTTCATTTTCCTGTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: QNRCIVYAMRGAELHFILVCFSC*FHFPVV Trigger: CACAACAGGAAAATGAAAGCAGCATGAAAAACACAC...AAGAATAAAATGAAGCTCTGCTCCTCTCATGGCGTAGACAATACATCTATTTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCATCTTCTATACAAGTAAGATGACCAAATCATaGAAGGAAAACCATGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: GVTQCKLYIEIHSIFYTSKMTKS*KENHGK Trigger: TTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTT...ACTTGTATAGAAGATGGAATGGATTTCAATATACAACTTGCACTGTGTTACTCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR GCA 72 bp | GCATGGTCCAGGCAGTGTGATGGCTCTGAAGCAGTGTaGCTCCCCAGCTACCCCTGCAAGTCGGTTGGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: AWSRQCDGSEAV*LPSYPCKSVGH Trigger: GTGACCAACCGACTTGCAGGGGTAGCTGGGGAGGCACACTGCTTCAGAGCCATCACACTGCCTGGACCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR CCA 72 bp | AGCAGTGTGCCTCCCCAGCTACCCCTGCAAGTCGGTTaGTCACAGTGCTCTGTAAGTCACATAGCCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SSVPPQLPLQVG*SQCSVSHIAWT Trigger: TGTCCAGGCTATGTGACTTACAGAGCACTGTGACCAACCGACTTGCAGGGGTAGCTGGGGAGGCACACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR GCA 72 bp | CCTCCCCAGCTACCCCTGCAAGTCGGTTGGTCACAGTaGTCTGTAAGTCACATAGCCTGGACAATTAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PPQLPLQVGWSQ*SVSHIAWTIRL Trigger: TAGCCTAATTGTCCAGGCTATGTGACTTACAGAGCACTGTGACCAACCGACTTGCAGGGGTAGCTGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTGTGGAGAGAGGAAGGACCCCTGCAAGTCGGTaGGTCACAGTGCTCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CDPYLLSSSRSCPVERGRTPASR*VTVLCK Trigger: CTTACAGAGCACTGTGACCAACCGACTTGCAGGGGT...CCTTCCTCTCTCCACAGGACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTGGCCTTTAATTCTGTCTTCTCTTaGAGTGCCCTTCTCCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SMCSSLWREIVPPHGVAFNSVFS*SALLLQ Trigger: TTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATT...AAAGGCCACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR CCA 72 bp | GAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTaGGCATCGTGGAGACAGGAAGAAAAGGGAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: ECGRPKAKYQTH*ASWRQEEKGGR Trigger: CCTCCCTCCCTTTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR CCA 72 bp | GTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATaGTGTGGCCTTTCACACCATTATCTGTATATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VQQPLERDSPAS*CGLSHHYLYIW Trigger: CCAAATATACAGATAATGGTGTGAAAGGCCACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR TCA 72 bp | AGGCAGATGAACTCGCAAGTATATGGTGGGTCACTGTaGGTACAAATGCAAAGCATGTGCAGCAGCCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RQMNSQVYGGSL*VQMQSMCSSLW Trigger: CCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCATATACTTGCGAGTTCATCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTTGTTTGTTTTTCTTCTaGTTGTCCTTGCTTGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NAKHVQQPLERDSPASWCCLFFF*LSLLVD Trigger: GTCAACAAGCAAGGACAACAAGAAGAAAAACAAACA...ACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAAAGGGAGAATTCTGTCTTCTCTTaGAGTGCCCTTCTCCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: QRQNIRHIGHRGDRKKRENSVFS*SALLLQ Trigger: TTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATT...CTCCCTTTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR GCA 72 bp | TATTGGCACTCGCCGTGTCACCTCAGCAAAGAGAGGTaGCACAAAATACTATTTGCACCAATATTTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: YWHSPCHLSKER*HKILFAPIFEG Trigger: GCCTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACGGCGAGTGCCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| 3UTR CCA 72 bp | AATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATaGCTGATGTTCCTTGTTACATTGGCCCTACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NSVFSLSALLLQ*LMFLVTLALQQ Trigger: TTGCTGTAGGGCCAATGTAACAAGGAACATCAGCCATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR GCA 72 bp | AACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTaGCCTTCTCCTGCAATGGCTGATGTTCCTTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: NIPEGKFCLLFE*PSPAMADVPCY Trigger: GTAACAAGGAACATCAGCCATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGAGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGGTAACACAGTGCAAGTaGTATATTGAAATCCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: REEGRSVEGQRQNIRHIGVTQCK*YIEIHS Trigger: GGAATGGATTTCAATATACAACTTGCACTGTGTTAC...CCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR GCA 72 bp | AAAGTATGTGTTTCCATATACACCTCTGAGCACGAGTaGACACATCTACAACATACACACACACAGACACAC | + |
|
Preference number: 3 (lower is better) Translates to: KVCVSIYTSEHE*THLQHTHTQTH Trigger: GTGTGTCTGTGTGTGTGTATGTTGTAGATGTGTGCACTCGTGCTCAGAGGTGTATATGGAAACACATACTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 |
||
| 3UTR CCA 72 bp | CTAAATGAAAAGGCAGATGAACTCGCAAGTATATGGTaGGTCACTGTGAGTACAAATGCAAAGCATGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LNEKADELASIW*VTVSTNAKHVQ Trigger: CTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCATATACTTGCGAGTTCATCTGCCTTTTCATTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR CCA 72 bp | TGGCTAAATGAAAAGGCAGATGAACTCGCAAGTATATaGTGGGTCACTGTGAGTACAAATGCAAAGCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: WLNEKADELASI*WVTVSTNAKHV Trigger: CACATGCTTTGCATTTGTACTCACAGTGACCCACCATATACTTGCGAGTTCATCTGCCTTTTCATTTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAATGTTTGTTTTTCTTCTaGTTGTCCTTGCTTGTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKCLFFF*LSLLVD Trigger: GTCAACAAGCAAGGACAACAAGAAGAAAAACAAACA...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTAATTCTGTCTTCTCTTaGAGTGCCCTTCTCCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SVYLEAHVISSVTPTYYLNSVFS*SALLLQ Trigger: TTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATT...AAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCGTAACACAGTGCAAGTaGTATATTGAAATCCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: CIFGGSCDLQCDPYLLSSVTQCK*YIEIHS Trigger: GGAATGGATTTCAATATACAACTTGCACTGTGTTAC...GGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR TCA 72 bp | ATGTACAGTGAAAATACTACAACATCTAATTGGGCTTaGCCATTCCTGTTAGCTACTTCACACATGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: MYSENTTTSNWA*PFLLATSHMLR Trigger: CCTGAGCATGTGTGAAGTAGCTAACAGGAATGGTCAAGCCCAATTAGATGTTGTAGTATTTTCACTGTACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR TCA 72 bp | CATCTAATTGTCACCTTTCACGAAGTTCGCAATCCCTaGACTGTATGTACAGTGAAAATACTACAACATCTA | + |
|
Preference number: 3 (lower is better) Translates to: HLIVTFHEVRNP*TVCTVKILQHL Trigger: TAGATGTTGTAGTATTTTCACTGTACATACAGTTCAGGGATTGCGAACTTCGTGAAAGGTGACAATTAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGTATGTACAGTGAAAATACTACAACATCTAATTGGGCTTGACCATTCCTGTGTAACACAGTGCAAGTaGTATATTGAAATCCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: TVCTVKILQHLIGLDHSCVTQCK*YIEIHS Trigger: GGAATGGATTTCAATATACAACTTGCACTGTGTTAC...ACAGGAATGGTCAAGCCCAATTAGATGTTGTAGTATTTTCACTGTACATACAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR CAA 72 bp | AAGCAGTGTGCCTCCCCAGCTACCCCTGCAAGTCGGTaGGTCACAGTGCTCTGTAAGTCACATAGCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KQCASPATPASR*VTVLCKSHSLD Trigger: GTCCAGGCTATGTGACTTACAGAGCACTGTGACCAACCGACTTGCAGGGGTAGCTGGGGAGGCACACTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTTCAGATCCACAGCTaGGAGCGAGTAGTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AHVISSVTPTYYLPVGAVLQIHS*ERVVWG Trigger: GCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAG...GACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCTTCAGATCCACAGCTaGGAGCGAGTAGTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: REEGRSVEGQRQNIRHIGLQIHS*ERVVWG Trigger: GCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAG...CCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTGGCCTTTCTCTCTTTGTTCTGCTaGATGATGTCCACCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SMCSSLWREIVPPHGVAFLSLFC*MMSTRL Trigger: CAACCTGGTGGACATCATTCAGCAGAACAAAGAGAG...AAAGGCCACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | AGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTGGCCTTTACAAAAATCCCAGCCTaGACAGCATGGACAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SMCSSLWREIVPPHGVAFTKIPA*TAWTML Trigger: CAGCATTGTCCATGCTGTCCAGGCTGGGATTTTTGT...AAAGGCCACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATGGCTGGGAACCCAATCATGGTaGACGAGCTGCTTGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQKENSVFSLSALLLQWLGTQSW*TSCLPR Trigger: ACGGGGCAAGCAGCTCGTCCACCATGATTGGGTTCC...CAGCCATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | GCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCGGAACCCAATCATGGTaGACGAGCTGCTTGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: AHVISSVTPTYYLPVGAVGTQSW*TSCLPR Trigger: ACGGGGCAAGCAGCTCGTCCACCATGATTGGGTTCC...GACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTGTGGAGAGAGGAAGGATCCCGGACTTCCGATaGGACGGAGTCAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: CDPYLLSSSRSCPVERGRIPDFR*DGVSLD Trigger: ATCCAGACTGACTCCGTCCCATCGGAAGTCCGGGAT...CCTTCCTCTCTCCACAGGACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTAATGCACAGTTTGAGTaGCGTCAGCTGCATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: NAKHVQQPLERDSPASWCNAQFE*RQLHGP Trigger: TGGTCCATGCAGCTGACGTCACTCAAACTGTGCATT...ACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATCTTCAGATCCACAGCTaGGAGCGAGTAGTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHLQIHS*ERVVWG Trigger: GCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAG...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | AGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTGGCCTTTGCTTCTTTGTCTCCCTaGAGGAAAAACTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SMCSSLWREIVPPHGVAFASLSP*RKNSSI Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGACAAAGAAGC...AAAGGCCACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTGTGGAGAGAGGAAGGATTCCCTTCAGGCGCTaGCACATCTTCTCGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDPYLLSSSRSCPVERGRIPFRR*HIFSVC Trigger: ACAGACCGAGAAGATGTGGCAGCGCCTGAAGGGAAT...CCTTCCTCTCTCCACAGGACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATGGAACCCAATCATGGTaGACGAGCTGCTTGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHGTQSW*TSCLPR Trigger: ACGGGGCAAGCAGCTCGTCCACCATGATTGGGTTCC...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTGGAACCCAATCATGGTaGACGAGCTGCTTGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGGTQSW*TSCLPR Trigger: ACGGGGCAAGCAGCTCGTCCACCATGATTGGGTTCC...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | AAGCTTCTTGTCATGTCCCTCTCTGAAATATTGCTTAGCCTTGAGGAACCTGGGGGAACCCAATCATGGTaGACGAGCTGCTTGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KLLVMSLSEILLSLEEPGGTQSW*TSCLPR Trigger: ACGGGGCAAGCAGCTCGTCCACCATGATTGGGTTCC...CCCAGGTTCCTCAAGGCTAAGCAATATTTCAGAGAGGGACATGACAAGAAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATGGCTGATCCCGGACTTCCGATaGGACGGAGTCAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQKENSVFSLSALLLQWLIPDFR*DGVSLD Trigger: ATCCAGACTGACTCCGTCCCATCGGAAGTCCGGGAT...CAGCCATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR CAA 72 bp | ACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTaGGAGAGAGATAGTCCCGCCTCATGGTGTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TVSTNAKHVQQP*ERDSPASWCGL Trigger: AAGGCCACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAAGTCTGTAGGCTGCGCTaGCGTGGTGATTCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKVCRLR*RGDSQA Trigger: TGCTTGAGAATCACCACGTCAGCGCAGCCTACAGAC...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGTTTTGGCTGGGTGGCTaGTGTCAGCTGCATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KEGVWKAKGKISDTLGIVFWLGG*CQLHGV Trigger: TACTCCATGCAGCTGACATCAGCCACCCAGCCAAAA...CACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTGTGGAGAGAGGAAGGCTGGGCAACCATTGTTaGCTTCCGATCACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CDPYLLSSSRSCPVERGRLGNHC*LPITKW Trigger: CCACTTTGTGATCGGAAGTCAACAATGGTTGCCCAG...CCTTCCTCTCTCCACAGGACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGCTAAGATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCTTCAGATCCACAGCTaGGAGCGAGTAGTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLAKMTKSWKENHGKNSGLQIHS*ERVVWG Trigger: GCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAG...GCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTTAGCCAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | AGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTGGCCTTTATAAACTTCAGGCTATaGTCCCCGCTTGCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SMCSSLWREIVPPHGVAFINFRL*SPLASF Trigger: AAATGAAGCAAGCGGGGAGCATAGCCTGAAGTTTAT...AAAGGCCACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | GCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCATTCCCTTCAGGCGCTaGCACATCTTCTCGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AHVISSVTPTYYLPVGAVIPFRR*HIFSVC Trigger: ACAGACCGAGAAGATGTGGCAGCGCCTGAAGGGAAT...GACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTATCCCGGACTTCCGATaGGACGGAGTCAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGIPDFR*DGVSLD Trigger: ATCCAGACTGACTCCGTCCCATCGGAAGTCCGGGAT...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | CATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGTGTCTGTAGGCTGCGCTaGCGTGGTGATTCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HGRKTMAKTVARILMITRVCRLR*RGDSQA Trigger: TGCTTGAGAATCACCACGTCAGCGCAGCCTACAGAC...ACGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATTTTTGGCTGGGTGGCTaGTGTCAGCTGCATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHFWLGG*CQLHGV Trigger: TACTCCATGCAGCTGACATCAGCCACCCAGCCAAAA...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTTTTTGGCTGGGTGGCTaGTGTCAGCTGCATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGFWLGG*CQLHGV Trigger: TACTCCATGCAGCTGACATCAGCCACCCAGCCAAAA...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAATTTTGGCTGGGTGGCTaGTGTCAGCTGCATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKFWLGG*CQLHGV Trigger: TACTCCATGCAGCTGACATCAGCCACCCAGCCAAAA...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | GCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTGGGCAACCATTGTTaGCTTCCGATCACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHVISSVTPTYYLPVGAVLGNHC*LPITKW Trigger: CCACTTTGTGATCGGAAGTCAACAATGGTTGCCCAG...GACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGCTTCAGATCCACAGCTaGGAGCGAGTAGTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLLQIHS*ERVVWG Trigger: GCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAG...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | AATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTTCCCCATTTTGCGTGTaGAAGTTGAAGCCAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NAKHVQQPLERDSPASWCSPFCV*KLKPTN Trigger: ATTGGTTGGCTTCAACTTTCACACGCAAAATGGGGA...ACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | AGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCCATAAGTCTGTAGGCTaGGCTGACGTGGTGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKEGVWKAKGKISDTLGIHKSVG*ADVVIL Trigger: GAGAATCACCACGTCAGCGCAGCCTACAGACTTATG...GATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGTGGCTGATGTCAGCTaGATGGAGTATCAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: EGRSVEGQRQNIRHIGHRVADVS*MEYQGH Trigger: ATGTCCCTGATACTCCATGCAGCTGACATCAGCCAC...ACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAAATTCCCTTCAGGCGCTaGCACATCTTCTCGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKIPFRR*HIFSVC Trigger: ACAGACCGAGAAGATGTGGCAGCGCCTGAAGGGAAT...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTCCAGCCTGGACAGCATaGACAATGCTGCGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: EGRSVEGQRQNIRHIGHRPAWTA*TMLRNF Trigger: AAAGTTTCGCAGCATTGTCCATGCTGTCCAGGCTGG...ACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTGTGGAGAGAGGAAGGACAAAAATCCCAGCCTaGACAGCATGGACAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CDPYLLSSSRSCPVERGRTKIPA*TAWTML Trigger: CAGCATTGTCCATGCTGTCCAGGCTGGGATTTTTGT...CCTTCCTCTCTCCACAGGACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCCTCCATTAGGGCCATaGTCCATCTGTAGTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: REEGRSVEGQRQNIRHIGPPLGP*SICSAT Trigger: AGTTGCACTACAGATGGACCATGGCCCTAATGGAGG...CCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATAATGCACAGTTTGAGTaGCGTCAGCTGCATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHNAQFE*RQLHGP Trigger: TGGTCCATGCAGCTGACGTCACTCAAACTGTGCATT...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGGTCTGTAGGCTGCGCTaGCGTGGTGATTCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLVCRLR*RGDSQA Trigger: TGCTTGAGAATCACCACGTCAGCGCAGCCTACAGAC...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGTCTGTAGGCTGCGCTaGCGTGGTGATTCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MTKSWKENHGKNSGQDPNVCRLR*RGDSQA Trigger: TGCTTGAGAATCACCACGTCAGCGCAGCCTACAGAC...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGTTTTTGGCTGGGTGGCTaGTGTCAGCTGCATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HGRKTMAKTVARILMITRFWLGG*CQLHGV Trigger: TACTCCATGCAGCTGACATCAGCCACCCAGCCAAAA...ACGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATGTTTTGGCTGGGTGGCTaGTGTCAGCTGCATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NIPEGKFCLLFECPSPAMFWLGG*CQLHGV Trigger: TACTCCATGCAGCTGACATCAGCCACCCAGCCAAAA...CATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATCTGGGCAACCATTGTTaGCTTCCGATCACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHLGNHC*LPITKW Trigger: CCACTTTGTGATCGGAAGTCAACAATGGTTGCCCAG...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGCTTCAGATCCACAGCTaGGAGCGAGTAGTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKLQIHS*ERVVWG Trigger: GCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAG...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | GTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCCTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VSTNAKHVQQPLERDSPALCSAE*CPPGCF Trigger: AAAACAACCTGGTGGACATCATTCAGCAGAACAAAG...GGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTCCCGCCTCATGGTGTCTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NAKHVQQPLERDSPASWCLCSAE*CPPGCF Trigger: AAAACAACCTGGTGGACATCATTCAGCAGAACAAAG...ACACCATGAGGCGGGACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCCTCTCTTTGTTCTGCTaGATGATGTCCACCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RKEGVWKAKGKISDTLGILSLFC*MMSTRL Trigger: CAACCTGGTGGACATCATTCAGCAGAACAAAGAGAG...GATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACATCTTATGCCTCAGCCTGTTCCCCATTTTGCGTGTaGAAGTTGAAGCCAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTHTHTHTSYASACSPFCV*KLKPTN Trigger: ATTGGTTGGCTTCAACTTTCACACGCAAAATGGGGA...ACAGGCTGAGGCATAAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGCGGTCTGTTCTCCAATaGGATACTTGTAAGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KEGVWKAKGKISDTLGIVRSVLQ*DTCKWR Trigger: ACGCCACTTACAAGTATCTCATTGGAGAACAGACCG...CACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCATAAGTCTGTAGGCTaGGCTGACGTGGTGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGHKSVG*ADVVIL Trigger: GAGAATCACCACGTCAGCGCAGCCTACAGACTTATG...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTGTGGCTGATGTCAGCTaGATGGAGTATCAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGVADVS*MEYQGH Trigger: ATGTCCCTGATACTCCATGCAGCTGACATCAGCCAC...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATGTGGCTGATGTCAGCTaGATGGAGTATCAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHVADVS*MEYQGH Trigger: ATGTCCCTGATACTCCATGCAGCTGACATCAGCCAC...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATCCAGCCTGGACAGCATaGACAATGCTGCGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHPAWTA*TMLRNF Trigger: AAAGTTTCGCAGCATTGTCCATGCTGTCCAGGCTGG...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | CATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGTCTTCCAAGTTTTGGCTaGGTGGCTGATGTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HGRKTMAKTVARILMITRLPSFG*VADVSC Trigger: GCAGCTGACATCAGCCACCCAGCCAAAACTTGGAAG...ACGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCCTCCATTAGGGCCATaGTCCATCTGTAGTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGPPLGP*SICSAT Trigger: AGTTGCACTACAGATGGACCATGGCCCTAATGGAGG...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | AAGCTTCTTGTCATGTCCCTCTCTGAAATATTGCTTAGCCTTGAGGAACCTGGGCCTCCATTAGGGCCATaGTCCATCTGTAGTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KLLVMSLSEILLSLEEPGPPLGP*SICSAT Trigger: AGTTGCACTACAGATGGACCATGGCCCTAATGGAGG...CCCAGGTTCCTCAAGGCTAAGCAATATTTCAGAGAGGGACATGACAAGAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TTGTTGCGTCACTCTGGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCGGAACCCAATCATGGTaGACGAGCTGCTTGCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRHSGVTQCKLYIEIHSGTQSW*TSCLPR Trigger: ACGGGGCAAGCAGCTCGTCCACCATGATTGGGTTCC...GGAATGGATTTCAATATACAACTTGCACTGTGTTACTCCAGAGTGACGCAACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGGTCTGTAGGCTGCGCTaGCGTGGTGATTCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKVCRLR*RGDSQA Trigger: TGCTTGAGAATCACCACGTCAGCGCAGCCTACAGAC...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | TTAGGATGGGTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCGTCTGTAGGCTGCGCTaGCGTGGTGATTCTCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGWVNLSAHHLIDSNCSFVCRLR*RGDSQA Trigger: TGCTTGAGAATCACCACGTCAGCGCAGCCTACAGAC...GAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCACCCATCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | TGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTGTGGAGAGAGGAAGGCTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CDPYLLSSSRSCPVERGRLCSAE*CPPGCF Trigger: AAAACAACCTGGTGGACATCATTCAGCAGAACAAAG...CCTTCCTCTCTCCACAGGACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATTCAATCCCTTCCGGCTaGTGCAAGCTGTTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHSIPSG*CKLFLM Trigger: CATAAGAAACAGCTTGCAGCAGCCGGAAGGGATTGA...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAATCAATCCCTTCCGGCTaGTGCAAGCTGTTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKSIPSG*CKLFLM Trigger: CATAAGAAACAGCTTGCAGCAGCCGGAAGGGATTGA...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGTAGGTCAATCCCTTCCGGCTaGTGCAAGCTGTTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: FGGSCDLQCDPYLLSSSRSIPSG*CKLFLM Trigger: CATAAGAAACAGCTTGCAGCAGCCGGAAGGGATTGA...CCTACTGGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGGTGGCTGATGTCAGCTaGATGGAGTATCAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SWKENHGKNSGQDPNDNSVADVS*MEYQGH Trigger: ATGTCCCTGATACTCCATGCAGCTGACATCAGCCAC...CGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGGCTTCTTTGTCTCCCTaGAGGAAAAACTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: REEGRSVEGQRQNIRHIGASLSP*RKNSSI Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGACAAAGAAGC...CCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCTCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | GTCGGTTGGTCACAGTGCTCTGTAAGTCACATAGCCTGGACAATTAGGCTAGCATCACCTTTCTCCAGCTaGTTCACTAAGCATCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGWSQCSVSHIAWTIRLASPFSS*FTKHLS Trigger: ACTAAGATGCTTAGTGAAGCAGCTGGAGAAAGGTGA...TGCTAGCCTAATTGTCCAGGCTATGTGACTTACAGAGCACTGTGACCAACCGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGGGTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGGACGTGTGTCAGCATaGTTTTCTTCAGTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WWVTVSTNAKHVQQPLERGRVSA*FSSVFP Trigger: AGGAAATACTGAAGAAAAGCATGCTGACACACGTCC...TCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTACAAAAATCCCAGCCTaGACAGCATGGACAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGTKIPA*TAWTML Trigger: CAGCATTGTCCATGCTGTCCAGGCTGGGATTTTTGT...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGCTTCCAAGTTTTGGCTaGGTGGCTGATGTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLLPSFG*VADVSC Trigger: GCAGCTGACATCAGCCACCCAGCCAAAACTTGGAAG...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATCTTCCAAGTTTTGGCTaGGTGGCTGATGTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MTKSWKENHGKNSGQDPNLPSFG*VADVSC Trigger: GCAGCTGACATCAGCCACCCAGCCAAAACTTGGAAG...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGCTAAGATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCCTCCATTAGGGCCATaGTCCATCTGTAGTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SLAKMTKSWKENHGKNSGPPLGP*SICSAT Trigger: AGTTGCACTACAGATGGACCATGGCCCTAATGGAGG...GCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTTAGCCAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGATCCCGGACTTCCGATaGGACGGAGTCAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKIPDFR*DGVSLD Trigger: ATCCAGACTGACTCCGTCCCATCGGAAGTCCGGGAT...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| 3UTR CAA 72 bp | CTCATGGTGTGGCCTTTCACACCATTATCTGTATATTaGGAGGCTCATGTGATCTCCAGTGTGACCCCTACT | + |
|
Preference number: 4 (lower is better) Translates to: LMVWPFTPLSVY*EAHVISSVTPT Trigger: AGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACAGATAATGGTGTGAAAGGCCACACCATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAATGCACAGTTTGAGTaGCGTCAGCTGCATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLNAQFE*RQLHGP Trigger: TGGTCCATGCAGCTGACGTCACTCAAACTGTGCATT...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGTTTTGGCTGGGTGGCTaGTGTCAGCTGCATGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKFWLGG*CQLHGV Trigger: TACTCCATGCAGCTGACATCAGCCACCCAGCCAAAA...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGCTGGGCAACCATTGTTaGCTTCCGATCACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLLGNHC*LPITKW Trigger: CCACTTTGTGATCGGAAGTCAACAATGGTTGCCCAG...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | TCTAGTGGTAACAACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTCTGGGCAACCATTGTTaGCTTCCGATCACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSGNNIPEGKFCLLFECPLGNHC*LPITKW Trigger: CCACTTTGTGATCGGAAGTCAACAATGGTTGCCCAG...AGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTTGTTACCACTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGCTAAGATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCTCTCTTTGTTCTGCTaGATGATGTCCACCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLAKMTKSWKENHGKNSGLSLFC*MMSTRL Trigger: CAACCTGGTGGACATCATTCAGCAGAACAAAGAGAG...GCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTTAGCCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTTCCCCATTTTGCGTGTaGAAGTTGAAGCCAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGSPFCV*KLKPTN Trigger: ATTGGTTGGCTTCAACTTTCACACGCAAAATGGGGA...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | CATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGTCGGTCTGTTCTCCAATaGGATACTTGTAAGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HGRKTMAKTVARILMITRRSVLQ*DTCKWR Trigger: ACGCCACTTACAAGTATCTCATTGGAGAACAGACCG...ACGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATGCGGTCTGTTCTCCAATaGGATACTTGTAAGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NIPEGKFCLLFECPSPAMRSVLQ*DTCKWR Trigger: ACGCCACTTACAAGTATCTCATTGGAGAACAGACCG...CATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | GAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTTGTCACTATGACAGCTaGAGGATATGTCAAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EGRSVEGQRQNIRHIGHRCHYDS*RICQTN Trigger: GTTGGTTTGACATATCCTGCAGCTGTCATAGTGACA...ACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTAAAACTCAGTGGATGGCTGCAGGATGGTCGATGACTTCAGGAGAAGATATAAACTTCAGGCTATaGTCCCCGCTTGCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: CLKTQWMAAGWSMTSGEDINFRL*SPLASF Trigger: AAATGAAGCAAGCGGGGAGCATAGCCTGAAGTTTAT...ATCTTCTCCTGAAGTCATCGACCATCCTGCAGCCATCCACTGAGTTTTAAGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGATAAACTTCAGGCTATaGTCCCCGCTTGCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KEGVWKAKGKISDTLGIVINFRL*SPLASF Trigger: AAATGAAGCAAGCGGGGAGCATAGCCTGAAGTTTAT...CACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTATCCCTTCCGGCTGCTaGAAGCTGTTTCTTATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGIPSGC*KLFLMF Trigger: AAACATAAGAAACAGCTTGCAGCAGCCGGAAGGGAT...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | TTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGTAGGATCCCTTCCGGCTGCTaGAAGCTGTTTCTTATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FGGSCDLQCDPYLLSSSRIPSGC*KLFLMF Trigger: AAACATAAGAAACAGCTTGCAGCAGCCGGAAGGGAT...CCTACTGGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGCTAAGATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCTCAATCCCTTCCGGCTaGTGCAAGCTGTTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLAKMTKSWKENHGKNSGSIPSG*CKLFLM Trigger: CATAAGAAACAGCTTGCAGCAGCCGGAAGGGATTGA...GCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTTAGCCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCGTGGCTGATGTCAGCTaGATGGAGTATCAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: CIFGGSCDLQCDPYLLSSVADVS*MEYQGH Trigger: ATGTCCCTGATACTCCATGCAGCTGACATCAGCCAC...GGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTGCTTCTTTGTCTCCCTaGAGGAAAAACTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGASLSP*RKNSSI Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGACAAAGAAGC...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | GTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGAGATAGTGCTTCTTTGTCTCCCTaGAGGAAAAACTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VTVSTNAKHVQQPLERDSASLSP*RKNSSI Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGACAAAGAAGC...ACTATCTCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTGCGTCACTCTGGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCATTCCCTTCAGGCGCTaGCACATCTTCTCGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLRHSGVTQCKLYIEIHSIPFRR*HIFSVC Trigger: ACAGACCGAGAAGATGTGGCAGCGCCTGAAGGGAAT...GGAATGGATTTCAATATACAACTTGCACTGTGTTACTCCAGAGTGACGCAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGCCAGCCTGGACAGCATaGACAATGCTGCGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLPAWTA*TMLRNF Trigger: AAAGTTTCGCAGCATTGTCCATGCTGTCCAGGCTGG...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATCCAGCCTGGACAGCATaGACAATGCTGCGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: MTKSWKENHGKNSGQDPNPAWTA*TMLRNF Trigger: AAAGTTTCGCAGCATTGTCCATGCTGTCCAGGCTGG...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGCTTCCAAGTTTTGGCTaGGTGGCTGATGTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKLPSFG*VADVSC Trigger: GCAGCTGACATCAGCCACCCAGCCAAAACTTGGAAG...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGCCTCCATTAGGGCCATaGTCCATCTGTAGTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLPPLGP*SICSAT Trigger: AGTTGCACTACAGATGGACCATGGCCCTAATGGAGG...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| 3UTR CAA 72 bp | ATACTATTTGCACCAATATTTGAAGGCATAAAGATCTaGATGCCGCAGCCACCAGGAGGTCTAGTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILFAPIFEGIKI*MPQPPGGLVHA Trigger: GGCATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAATAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGAATGCACAGTTTGAGTaGCGTCAGCTGCATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKNAQFE*RQLHGP Trigger: TGGTCCATGCAGCTGACGTCACTCAAACTGTGCATT...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGCTGGGCAACCATTGTTaGCTTCCGATCACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKLGNHC*LPITKW Trigger: CCACTTTGTGATCGGAAGTCAACAATGGTTGCCCAG...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTGACAATTTTCTCTGTTaGGTCCGTCAGGAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGDNFLC*VRQERK Trigger: TTTTCTCTCCTGACGGACTCAACAGAGAAAATTGTC...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | GGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCATCTTCTATACAAGTCTTCAGATCCACAGCTaGGAGCGAGTAGTCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVTQCKLYIEIHSIFYTSLQIHS*ERVVWG Trigger: GCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAG...ACTTGTATAGAAGATGGAATGGATTTCAATATACAACTTGCACTGTGTTACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATCTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHLCSAE*CPPGCF Trigger: AAAACAACCTGGTGGACATCATTCAGCAGAACAAAG...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGCTCTCTTTGTTCTGCTaGATGATGTCCACCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLLSLFC*MMSTRL Trigger: CAACCTGGTGGACATCATTCAGCAGAACAAAGAGAG...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | CATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGTTCCCCATTTTGCGTGTaGAAGTTGAAGCCAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HGRKTMAKTVARILMITRSPFCV*KLKPTN Trigger: ATTGGTTGGCTTCAACTTTCACACGCAAAATGGGGA...ACGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTTGTCACTATGACAGCTaGAGGATATGTCAAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGCHYDS*RICQTN Trigger: GTTGGTTTGACATATCCTGCAGCTGTCATAGTGACA...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATATAAACTTCAGGCTATaGTCCCCGCTTGCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHINFRL*SPLASF Trigger: AAATGAAGCAAGCGGGGAGCATAGCCTGAAGTTTAT...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGCATAAGTCTGTAGGCTaGGCTGACGTGGTGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKHKSVG*ADVVIL Trigger: GAGAATCACCACGTCAGCGCAGCCTACAGACTTATG...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | TTAGGATGGGTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCCATAAGTCTGTAGGCTaGGCTGACGTGGTGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGWVNLSAHHLIDSNCSFHKSVG*ADVVIL Trigger: GAGAATCACCACGTCAGCGCAGCCTACAGACTTATG...GAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCACCCATCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGTCAATCCCTTCCGGCTaGTGCAAGCTGTTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLSIPSG*CKLFLM Trigger: CATAAGAAACAGCTTGCAGCAGCCGGAAGGGATTGA...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGGTGGCTGATGTCAGCTaGATGGAGTATCAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKVADVS*MEYQGH Trigger: ATGTCCCTGATACTCCATGCAGCTGACATCAGCCAC...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | TCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGGCTTCTTTGTCTCCCTaGAGGAAAAACTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SWKENHGKNSGQDPNDNSASLSP*RKNSSI Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGACAAAGAAGC...CGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGTCAATGAAACCTATTTaGGACTGGGCAACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: REEGRSVEGQRQNIRHIGSMKPI*DWATIV Trigger: AACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGA...CCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCTGTGGAGAGAGGAAGGAATGCTGCGAAACTTTaGTTTTTCTTCAGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CDPYLLSSSRSCPVERGRNAAKL*FFFRLL Trigger: AAGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATT...CCTTCCTCTCTCCACAGGACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGCCAGCCTGGACAGCATaGACAATGCTGCGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKPAWTA*TMLRNF Trigger: AAAGTTTCGCAGCATTGTCCATGCTGTCCAGGCTGG...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | TTAGGATGGGTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCCCAGCCTGGACAGCATaGACAATGCTGCGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGWVNLSAHHLIDSNCSFPAWTA*TMLRNF Trigger: AAAGTTTCGCAGCATTGTCCATGCTGTCCAGGCTGG...GAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCACCCATCCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGACAAAAATCCCAGCCTaGACAGCATGGACAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLTKIPA*TAWTML Trigger: CAGCATTGTCCATGCTGTCCAGGCTGGGATTTTTGT...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CCA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATACAAAAATCCCAGCCTaGACAGCATGGACAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MTKSWKENHGKNSGQDPNTKIPA*TAWTML Trigger: CAGCATTGTCCATGCTGTCCAGGCTGGGATTTTTGT...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGCCTCCATTAGGGCCATaGTCCATCTGTAGTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKPPLGP*SICSAT Trigger: AGTTGCACTACAGATGGACCATGGCCCTAATGGAGG...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CCA 90 bp | AGAGAGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCAGGAGAGAAAACGTTaGCTCCACTATGAAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: REEGRSVEGQRQNIRHIGQERKR*LHYEIN Trigger: ATTGATTTCATAGTGGAGCCAACGTTTTCTCTCCTG...CCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR TCA 90 bp | AATTTATGCTTTTCTTCCTTACAGAGGAGTCCACTAAAATGGACTGAGCCAAACAATGCACAGTTTGAGTaGCGTCAGCTGCATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: NLCFSSLQRSPLKWTEPNNAQFE*RQLHGP Trigger: TGGTCCATGCAGCTGACGTCACTCAAACTGTGCATT...GTTTGGCTCAGTCCATTTTAGTGGACTCCTCTGTAAGGAAGAAAAGCATAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | AATTTATGCTTTTCTTCCTTACAGAGGAGTCCACTAAAATGGACTGAGCCAAACCTGGGCAACCATTGTTaGCTTCCGATCACAAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NLCFSSLQRSPLKWTEPNLGNHC*LPITKW Trigger: CCACTTTGTGATCGGAAGTCAACAATGGTTGCCCAG...GTTTGGCTCAGTCCATTTTAGTGGACTCCTCTGTAAGGAAGAAAAGCATAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR TCA 90 bp | CATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGTGACAATTTTCTCTGTTaGGTCCGTCAGGAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGRKTMAKTVARILMITRDNFLC*VRQERK Trigger: TTTTCTCTCCTGACGGACTCAACAGAGAAAATTGTC...ACGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGCTCTCTTTGTTCTGCTaGATGATGTCCACCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKLSLFC*MMSTRL Trigger: CAACCTGGTGGACATCATTCAGCAGAACAAAGAGAG...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR GCA 90 bp | CATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGTTGTCACTATGACAGCTaGAGGATATGTCAAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: HGRKTMAKTVARILMITRCHYDS*RICQTN Trigger: GTTGGTTTGACATATCCTGCAGCTGTCATAGTGACA...ACGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCATCCCTTCCGGCTGCTaGAAGCTGTTTCTTATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CIFGGSCDLQCDPYLLSSIPSGC*KLFLMF Trigger: AAACATAAGAAACAGCTTGCAGCAGCCGGAAGGGAT...GGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR GCA 90 bp | TTGTTGCGTCACTCTGGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCTCAATCCCTTCCGGCTaGTGCAAGCTGTTTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: LLRHSGVTQCKLYIEIHSSIPSG*CKLFLM Trigger: CATAAGAAACAGCTTGCAGCAGCCGGAAGGGATTGA...GGAATGGATTTCAATATACAACTTGCACTGTGTTACTCCAGAGTGACGCAACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR GCA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATTCAATGAAACCTATTTaGGACTGGGCAACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IFEGIKILMPQPPGGLVHSMKPI*DWATIV Trigger: AACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGA...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR GCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTTCAATGAAACCTATTTaGGACTGGGCAACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGSMKPI*DWATIV Trigger: AACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGA...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CCA 90 bp | TCACGAAGTTCGCAATCCCTGAACTGTATGTACAGTGAAAATACTACAACATCTCCAGCCTGGACAGCATaGACAATGCTGCGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQSLNCMYSENTTTSPAWTA*TMLRNF Trigger: AAAGTTTCGCAGCATTGTCCATGCTGTCCAGGCTGG...AGATGTTGTAGTATTTTCACTGTACATACAGTTCAGGGATTGCGAACTTCGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGACAAAAATCCCAGCCTaGACAGCATGGACAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKTKIPA*TAWTML Trigger: CAGCATTGTCCATGCTGTCCAGGCTGGGATTTTTGT...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CCA 90 bp | GAACTTTGTGGCTCAGTTACTAGACTGAAATTTATGCTTTTCTTCCTTACAGAGCTTCCAAGTTTTGGCTaGGTGGCTGATGTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ELCGSVTRLKFMLFFLTELPSFG*VADVSC Trigger: GCAGCTGACATCAGCCACCCAGCCAAAACTTGGAAG...CTCTGTAAGGAAGAAAAGCATAAATTTCAGTCTAGTAACTGAGCCACAAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CCA 90 bp | GTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCCATCTAATTCTTCCAAGTTTTGGCTaGGTGGCTGATGTCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VNLSAHHLIDSNCSFHLILPSFG*VADVSC Trigger: GCAGCTGACATCAGCCACCCAGCCAAAACTTGGAAG...AATTAGATGGAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CCA 90 bp | AATTTATGCTTTTCTTCCTTACAGAGGAGTCCACTAAAATGGACTGAGCCAAACCCTCCATTAGGGCCATaGTCCATCTGTAGTGCAACT | + |
|
Preference number: 4 (lower is better) Translates to: NLCFSSLQRSPLKWTEPNPPLGP*SICSAT Trigger: AGTTGCACTACAGATGGACCATGGCCCTAATGGAGG...GTTTGGCTCAGTCCATTTTAGTGGACTCCTCTGTAAGGAAGAAAAGCATAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCAGGAGAGAAAACGTTaGCTCCACTATGAAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGQERKR*LHYEIN Trigger: ATTGATTTCATAGTGGAGCCAACGTTTTCTCTCCTG...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CCA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAACAGGAGAGAAAACGTTaGCTCCACTATGAAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKQERKR*LHYEIN Trigger: ATTGATTTCATAGTGGAGCCAACGTTTTCTCTCCTG...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CCA 90 bp | CAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAAAGGGAGCAGGAGAGAAAACGTTaGCTCCACTATGAAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QRQNIRHIGHRGDRKKREQERKR*LHYEIN Trigger: ATTGATTTCATAGTGGAGCCAACGTTTTCTCTCCTG...CTCCCTTTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CCA 90 bp | GGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCATCTTCTATACAAGTATCCCGGACTTCCGATaGGACGGAGTCAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVTQCKLYIEIHSIFYTSIPDFR*DGVSLD Trigger: ATCCAGACTGACTCCGTCCCATCGGAAGTCCGGGAT...ACTTGTATAGAAGATGGAATGGATTTCAATATACAACTTGCACTGTGTTACTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CCA 90 bp | TCCTTAGATTCTAGCTTTACTGAAAGACAACTGGCTCAATTAGGAACAATAGTAATCCCGGACTTCCGATaGGACGGAGTCAGTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLDSSFTERQLAQLGTIVIPDFR*DGVSLD Trigger: ATCCAGACTGACTCCGTCCCATCGGAAGTCCGGGAT...TACTATTGTTCCTAATTGAGCCAGTTGTCTTTCAGTAAAGCTAGAATCTAAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR TCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGGACAATTTTCTCTGTTaGGTCCGTCAGGAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLDNFLC*VRQERK Trigger: TTTTCTCTCCTGACGGACTCAACAGAGAAAATTGTC...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR TCA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGACAATTTTCTCTGTTaGGTCCGTCAGGAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: MTKSWKENHGKNSGQDPNDNFLC*VRQERK Trigger: TTTTCTCTCCTGACGGACTCAACAGAGAAAATTGTC...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR TCA 90 bp | TCTAGTGGTAACAACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTGACAATTTTCTCTGTTaGGTCCGTCAGGAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSGNNIPEGKFCLLFECPDNFLC*VRQERK Trigger: TTTTCTCTCCTGACGGACTCAACAGAGAAAATTGTC...AGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTTGTTACCACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR TCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGTCCCCATTTTGCGTGTaGAAGTTGAAGCCAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKSPFCV*KLKPTN Trigger: ATTGGTTGGCTTCAACTTTCACACGCAAAATGGGGA...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR GCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGTGTCACTATGACAGCTaGAGGATATGTCAAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLCHYDS*RICQTN Trigger: GTTGGTTTGACATATCCTGCAGCTGTCATAGTGACA...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR GCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGATAAACTTCAGGCTATaGTCCCCGCTTGCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLINFRL*SPLASF Trigger: AAATGAAGCAAGCGGGGAGCATAGCCTGAAGTTTAT...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR GCA 90 bp | TTAGGATGGGTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCATCCCTTCCGGCTGCTaGAAGCTGTTTCTTATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LGWVNLSAHHLIDSNCSFIPSGC*KLFLMF Trigger: AAACATAAGAAACAGCTTGCAGCAGCCGGAAGGGAT...GAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCACCCATCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR GCA 90 bp | GTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCCATCTAATTGTGGCTGATGTCAGCTaGATGGAGTATCAGGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: VNLSAHHLIDSNCSFHLIVADVS*MEYQGH Trigger: ATGTCCCTGATACTCCATGCAGCTGACATCAGCCAC...AATTAGATGGAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR GCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGGCTTCTTTGTCTCCCTaGAGGAAAAACTCCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKASLSP*RKNSSI Trigger: AATGGAGGAGTTTTTCCTGCAGGGAGACAAAGAAGC...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR GCA 90 bp | TCTAGTGGTAACAACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTGGACGTGTGTCAGCATaGTTTTCTTCAGTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGNNIPEGKFCLLFECPGRVSA*FSSVFP Trigger: AGGAAATACTGAAGAAAAGCATGCTGACACACGTCC...AGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTTGTTACCACTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CCA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTAATGCTGCGAAACTTTaGTTTTTCTTCAGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FAPIFEGIKILMPQPPGGNAAKL*FFFRLL Trigger: AAGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATT...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CCA 90 bp | AATTTATGCTTTTCTTCCTTACAGAGGAGTCCACTAAAATGGACTGAGCCAAACACAAAAATCCCAGCCTaGACAGCATGGACAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLCFSSLQRSPLKWTEPNTKIPA*TAWTML Trigger: CAGCATTGTCCATGCTGTCCAGGCTGGGATTTTTGT...GTTTGGCTCAGTCCATTTTAGTGGACTCCTCTGTAAGGAAGAAAAGCATAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR CAA 72 bp | TCTTCTTGTTGTCCTTGCTTGTTGACAATTGTGTTGTaGCGTCACTCTGGAGTAACACAGTGCAAGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSCCPCLLTIVL*RHSGVTQCKLY Trigger: ATACAACTTGCACTGTGTTACTCCAGAGTGACGCAACAACACAATTGTCAACAAGCAAGGACAACAAGAAGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| 3UTR CAA 72 bp | TTTTCTTCTTGTTGTCCTTGCTTGTTGACAATTGTGTaGTTGCGTCACTCTGGAGTAACACAGTGCAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSSCCPCLLTIV*LRHSGVTQCKL Trigger: CAACTTGCACTGTGTTACTCCAGAGTGACGCAACAACACAATTGTCAACAAGCAAGGACAACAAGAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGGACAATTTTCTCTGTTaGGTCCGTCAGGAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKDNFLC*VRQERK Trigger: TTTTCTCTCCTGACGGACTCAACAGAGAAAATTGTC...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | AAAGTATGTGTTTCCATATACACCTCTGAGCACGAGTGCACACATCTACAACATGACAATTTTCTCTGTTaGGTCCGTCAGGAGAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KVCVSIYTSEHECTHLQHDNFLC*VRQERK Trigger: TTTTCTCTCCTGACGGACTCAACAGAGAAAATTGTC...ATGTTGTAGATGTGTGCACTCGTGCTCAGAGGTGTATATGGAAACACATACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 |
||
| CDS-3UTR TCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGCTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKLCSAE*CPPGCF Trigger: AAAACAACCTGGTGGACATCATTCAGCAGAACAAAG...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | GAACTTTGTGGCTCAGTTACTAGACTGAAATTTATGCTTTTCTTCCTTACAGAGCGGTCTGTTCTCCAATaGGATACTTGTAAGTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ELCGSVTRLKFMLFFLTERSVLQ*DTCKWR Trigger: ACGCCACTTACAAGTATCTCATTGGAGAACAGACCG...CTCTGTAAGGAAGAAAAGCATAAATTTCAGTCTAGTAACTGAGCCACAAAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGTGTCACTATGACAGCTaGAGGATATGTCAAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKCHYDS*RICQTN Trigger: GTTGGTTTGACATATCCTGCAGCTGTCATAGTGACA...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCATCTTCTATACAAGTCATAAGTCTGTAGGCTaGGCTGACGTGGTGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVTQCKLYIEIHSIFYTSHKSVG*ADVVIL Trigger: GAGAATCACCACGTCAGCGCAGCCTACAGACTTATG...ACTTGTATAGAAGATGGAATGGATTTCAATATACAACTTGCACTGTGTTACTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTAGATTCTAGCTTTACTGAAAGACAACTGGCTCAATTAGGAACAATAGTACATAAGTCTGTAGGCTaGGCTGACGTGGTGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLDSSFTERQLAQLGTIVHKSVG*ADVVIL Trigger: GAGAATCACCACGTCAGCGCAGCCTACAGACTTATG...TACTATTGTTCCTAATTGAGCCAGTTGTCTTTCAGTAAAGCTAGAATCTAAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | AATTTATGCTTTTCTTCCTTACAGAGGAGTCCACTAAAATGGACTGAGCCAAACATCCCTTCCGGCTGCTaGAAGCTGTTTCTTATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLCFSSLQRSPLKWTEPNIPSGC*KLFLMF Trigger: AAACATAAGAAACAGCTTGCAGCAGCCGGAAGGGAT...GTTTGGCTCAGTCCATTTTAGTGGACTCCTCTGTAAGGAAGAAAAGCATAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATTCAATGAAACCTATTTaGGACTGGGCAACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MTKSWKENHGKNSGQDPNSMKPI*DWATIV Trigger: AACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGA...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGCTAAGATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCAATGCTGCGAAACTTTaGTTTTTCTTCAGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLAKMTKSWKENHGKNSGNAAKL*FFFRLL Trigger: AAGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATT...GCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTTAGCCAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGCAGGAGAGAAAACGTTaGCTCCACTATGAAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLQERKR*LHYEIN Trigger: ATTGATTTCATAGTGGAGCCAACGTTTTCTCTCCTG...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR TCA 90 bp | GAACTTTGTGGCTCAGTTACTAGACTGAAATTTATGCTTTTCTTCCTTACAGAGTCCCCATTTTGCGTGTaGAAGTTGAAGCCAACCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ELCGSVTRLKFMLFFLTESPFCV*KLKPTN Trigger: ATTGGTTGGCTTCAACTTTCACACGCAAAATGGGGA...CTCTGTAAGGAAGAAAAGCATAAATTTCAGTCTAGTAACTGAGCCACAAAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGTCAATGAAACCTATTTaGGACTGGGCAACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKSMKPI*DWATIV Trigger: AACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGA...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | TTGTTGCGTCACTCTGGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCTCAATGAAACCTATTTaGGACTGGGCAACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRHSGVTQCKLYIEIHSSMKPI*DWATIV Trigger: AACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGA...GGAATGGATTTCAATATACAACTTGCACTGTGTTACTCCAGAGTGACGCAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | AATTTATGCTTTTCTTCCTTACAGAGGAGTCCACTAAAATGGACTGAGCCAAACTCACCTTTCTCCAGCTaGTTCACTAAGCATCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLCFSSLQRSPLKWTEPNSPFSS*FTKHLS Trigger: ACTAAGATGCTTAGTGAAGCAGCTGGAGAAAGGTGA...GTTTGGCTCAGTCCATTTTAGTGGACTCCTCTGTAAGGAAGAAAAGCATAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TCACGAAGTTCGCAATCCCTGAACTGTATGTACAGTGAAAATACTACAACATCTTCACCTTTCTCCAGCTaGTTCACTAAGCATCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRSSQSLNCMYSENTTTSSPFSS*FTKHLS Trigger: ACTAAGATGCTTAGTGAAGCAGCTGGAGAAAGGTGA...AGATGTTGTAGTATTTTCACTGTACATACAGTTCAGGGATTGCGAACTTCGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | AATTTATGCTTTTCTTCCTTACAGAGGAGTCCACTAAAATGGACTGAGCCAAACGGACGTGTGTCAGCATaGTTTTCTTCAGTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLCFSSLQRSPLKWTEPNGRVSA*FSSVFP Trigger: AGGAAATACTGAAGAAAAGCATGCTGACACACGTCC...GTTTGGCTCAGTCCATTTTAGTGGACTCCTCTGTAAGGAAGAAAAGCATAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAATGCTGCGAAACTTTaGTTTTTCTTCAGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVTSAKRGATKYYLHQYLNAAKL*FFFRLL Trigger: AAGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATT...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGCAGGAGAGAAAACGTTaGCTCCACTATGAAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKQERKR*LHYEIN Trigger: ATTGATTTCATAGTGGAGCCAACGTTTTCTCTCCTG...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR GCA 90 bp | GAACTTTGTGGCTCAGTTACTAGACTGAAATTTATGCTTTTCTTCCTTACAGAGATAAACTTCAGGCTATaGTCCCCGCTTGCTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: ELCGSVTRLKFMLFFLTEINFRL*SPLASF Trigger: AAATGAAGCAAGCGGGGAGCATAGCCTGAAGTTTAT...CTCTGTAAGGAAGAAAAGCATAAATTTCAGTCTAGTAACTGAGCCACAAAGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | GTGAACCTTTCTGCACATCACCTAATTGACAGTAACTGTTCATTCCATCTAATTTCACCTTTCTCCAGCTaGTTCACTAAGCATCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNLSAHHLIDSNCSFHLISPFSS*FTKHLS Trigger: ACTAAGATGCTTAGTGAAGCAGCTGGAGAAAGGTGA...AATTAGATGGAATGAACAGTTACTGTCAATTAGGTGATGTGCAGAAAGGTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CCA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGAATGCTGCGAAACTTTaGTTTTTCTTCAGGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAKRGATKYYLHQYLKNAAKL*FFFRLL Trigger: AAGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATT...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CCA 90 bp | AATTTATGCTTTTCTTCCTTACAGAGGAGTCCACTAAAATGGACTGAGCCAAACCAGGAGAGAAAACGTTaGCTCCACTATGAAATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NLCFSSLQRSPLKWTEPNQERKR*LHYEIN Trigger: ATTGATTTCATAGTGGAGCCAACGTTTTCTCTCCTG...GTTTGGCTCAGTCCATTTTAGTGGACTCCTCTGTAAGGAAGAAAAGCATAAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| 3UTR CAA 72 bp | GTTATAAAGACCTCACAACTTAGGCTTAAAAGCTTCTaGTCATGTCCCTCTCTGAAATATTGCTTAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VIKTSQLRLKSF*SCPSLKYCLAL Trigger: CAAGGCTAAGCAATATTTCAGAGAGGGACATGACAAGAAGCTTTTAAGCCTAAGTTGTGAGGTCTTTATAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR TCA 90 bp | GGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCATCTTCTATACAAGTCTTTGTTCTGCTGAATaGTGTCCACCAGGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GVTQCKLYIEIHSIFYTSLCSAE*CPPGCF Trigger: AAAACAACCTGGTGGACATCATTCAGCAGAACAAAG...ACTTGTATAGAAGATGGAATGGATTTCAATATACAACTTGCACTGTGTTACTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | CAAAATAGATGTATTGTCTACGCCATGAGAGGAGCAGAGCTTCATTTTATTCTTTCAATGAAACCTATTTaGGACTGGGCAACCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QNRCIVYAMRGAELHFILSMKPI*DWATIV Trigger: AACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGA...AAGAATAAAATGAAGCTCTGCTCCTCTCATGGCGTAGACAATACATCTATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTAGATTCTAGCTTTACTGAAAGACAACTGGCTCAATTAGGAACAATAGTAGGACGTGTGTCAGCATaGTTTTCTTCAGTATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLDSSFTERQLAQLGTIVGRVSA*FSSVFP Trigger: AGGAAATACTGAAGAAAAGCATGCTGACACACGTCC...TACTATTGTTCCTAATTGAGCCAGTTGTCTTTCAGTAAAGCTAGAATCTAAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS TCA 90 bp | AATGATGTCCACCAGGTTGTTTTTGAAACTCTTCAGATCCACAGCTaGGAGCGAGTAGTCTGGGGCATAGCTCCCATCACACACGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NDVHQVVFETLQIHS*ERVVWGIAPITHGA Trigger: GGCTCCGTGTGTGATGGGAGCTATGCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAGAGTTTCAAAAACAACCTGGTGGACATCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
||
| CDS GCA 90 bp | GCCTCAGAGAGTCAGCAACATGGAACCCAATCATGGTGGACGAGCTaGTTGCCCCGTAGTTTGAAGACTGTGACTTTGAAGCTTCCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: ASESQQHGTQSWWTS*LPRSLKTVTLKLPL Trigger: TAGAGGAAGCTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCAGCTCGTCCACCATGATTGGGTTCCATGTTGCTGACTCTCTGAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGTGCAACTTCCAAGTTTaGGCTGGGTGGCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KEGVWKAKGKISDTLGIVCNFQV*AGWLMS Trigger: TGACATCAGCCACCCAGCCAAAACTTGGAAGTTGCA...CACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | GTCGGTTGGTCACAGTGCTCTGTAAGTCACATAGCCTGGACAATTAGGCTAGCATGCTTGCCCCGTAGTTaGAAGACTGTGACTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VGWSQCSVSHIAWTIRLACLPRS*KTVTLK Trigger: CTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCA...TGCTAGCCTAATTGTCCAGGCTATGTGACTTACAGAGCACTGTGACCAACCGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTTGCAACTTCCAAGTTTaGGCTGGGTGGCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FAPIFEGIKILMPQPPGGCNFQV*AGWLMS Trigger: TGACATCAGCCACCCAGCCAAAACTTGGAAGTTGCA...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAATGCAACTTCCAAGTTTaGGCTGGGTGGCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKCNFQV*AGWLMS Trigger: TGACATCAGCCACCCAGCCAAAACTTGGAAGTTGCA...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATATCAGGGACATAGTTTaGGCTCTGTCAATCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IFEGIKILMPQPPGGLVHIRDIV*ALSIPS Trigger: GGAAGGGATTGACAGAGCCAAAACTATGTCCCTGAT...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTATCAGGGACATAGTTTaGGCTCTGTCAATCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FAPIFEGIKILMPQPPGGIRDIV*ALSIPS Trigger: GGAAGGGATTGACAGAGCCAAAACTATGTCCCTGAT...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | GCGAGAAGCAACTCATTAGGATGGGTGAACCTTTCTGCACATCACCTAATTGACATCAGGGACATAGTTTaGGCTCTGTCAATCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ARSNSLGWVNLSAHHLIDIRDIV*ALSIPS Trigger: GGAAGGGATTGACAGAGCCAAAACTATGTCCCTGAT...GTCAATTAGGTGATGTGCAGAAAGGTTCACCCATCCTAATGAGTTGCTTCTCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTTGCTTGCCCCGTAGTTaGAAGACTGTGACTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FAPIFEGIKILMPQPPGGCLPRS*KTVTLK Trigger: CTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCA...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAATGCTTGCCCCGTAGTTaGAAGACTGTGACTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKCLPRS*KTVTLK Trigger: CTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCA...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGTCACTGTGAGTACAAATGCAAAGCATGTGCAGCAGCCTTTGGAGAGATCCACCAGGTTGTTTTaGAAACTCTTCAGATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: WWVTVSTNAKHVQQPLERSTRLF*KLFRST Trigger: TGTGGATCTGAAGAGTTTCAAAAACAACCTGGTGGA...TCTCTCCAAAGGCTGCTGCACATGCTTTGCATTTGTACTCACAGTGACCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | GCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCCAATGCTGCGAAACTTaGGTTTTTCTTCAGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AHVISSVTPTYYLPVGAVQCCET*VFLQAS Trigger: AGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATTG...GACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGCAATGCTGCGAAACTTaGGTTTTTCTTCAGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEGVWKAKGKISDTLGIVQCCET*VFLQAS Trigger: AGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATTG...CACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | TCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGATCAGGGACATAGTTTaGGCTCTGTCAATCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SWKENHGKNSGQDPNDNSIRDIV*ALSIPS Trigger: GGAAGGGATTGACAGAGCCAAAACTATGTCCCTGAT...CGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGCTAAGATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCATCAGGGACATAGTTTaGGCTCTGTCAATCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLAKMTKSWKENHGKNSGIRDIV*ALSIPS Trigger: GGAAGGGATTGACAGAGCCAAAACTATGTCCCTGAT...GCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTTAGCCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGTGCAACTTCCAAGTTTaGGCTGGGTGGCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RVTSAKRGATKYYLHQYLCNFQV*AGWLMS Trigger: TGACATCAGCCACCCAGCCAAAACTTGGAAGTTGCA...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATTGCAACTTCCAAGTTTaGGCTGGGTGGCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MTKSWKENHGKNSGQDPNCNFQV*AGWLMS Trigger: TGACATCAGCCACCCAGCCAAAACTTGGAAGTTGCA...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | GCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGTAGGAGCTGTCATCAATGAAACCTATTaGCGACTGGGCAACCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: AHVISSVTPTYYLPVGAVINETY*RLGNHC Trigger: ACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGAT...GACAGCTCCTACTGGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTGGCTAAGATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCTGCTTGCCCCGTAGTTaGAAGACTGTGACTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLAKMTKSWKENHGKNSGCLPRS*KTVTLK Trigger: CTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCA...GCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTTAGCCAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCAGTAGGTTCATCATCCCCATTTaGCGTGTGAAAGTTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FGGSCDLQCDPYLLSSSRFIIPI*RVKVEA Trigger: GGCTTCAACTTTCACACGCAAAATGGGGATGATGAA...CCTACTGGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS GCA 90 bp | ATATTCTTCTTTAGGTCAACAACGTTGACATCACCTTTCTCCAGCTaGTTCACTAAGCATCTTAGTATTCCCTTCAGGCGCTGCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: IFFFRSTTLTSPFSS*FTKHLSIPFRRCHI Trigger: GATGTGGCAGCGCCTGAAGGGAATACTAAGATGCTTAGTGAAGCAGCTGGAGAAAGGTGATGTCAACGTTGTTGACCTAAAGAAGAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTGGAGACAGGAAGAAACAATGCTGCGAAACTTaGGTTTTTCTTCAGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EGQRQNIRHIGHRGDRKKQCCET*VFLQAS Trigger: AGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATTG...TTTCTTCCTGTCTCCACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | AGGAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGGAATCTTGAAGCGGTaGATAAGATCATATCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RKEGVWKAKGKISDTLGIGILKR*IRSYLV Trigger: TACCAGATATGATCTTATCAACCGCTTCAAGATTCC...GATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGATCAGGGACATAGTTTaGGCTCTGTCAATCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVTSAKRGATKYYLHQYLIRDIV*ALSIPS Trigger: GGAAGGGATTGACAGAGCCAAAACTATGTCCCTGAT...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGTGCAACTTCCAAGTTTaGGCTGGGTGGCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VTSAKRGATKYYLHQYLKCNFQV*AGWLMS Trigger: TGACATCAGCCACCCAGCCAAAACTTGGAAGTTGCA...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATATCAATGAAACCTATTaGCGACTGGGCAACCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: IFEGIKILMPQPPGGLVHINETY*RLGNHC Trigger: ACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGAT...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGTGCTTGCCCCGTAGTTaGAAGACTGTGACTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RVTSAKRGATKYYLHQYLCLPRS*KTVTLK Trigger: CTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCA...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | TGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTCCTGCTTGCCCCGTAGTTaGAAGACTGTGACTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CIFGGSCDLQCDPYLLSSCLPRS*KTVTLK Trigger: CTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCA...GGAAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATTCCACCAGGTTGTTTTaGAAACTCTTCAGATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: IFEGIKILMPQPPGGLVHSTRLF*KLFRST Trigger: TGTGGATCTGAAGAGTTTCAAAAACAACCTGGTGGA...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGAAGGAGTGTGGAAGGCCAAAGGCAAAATATCAGACACATTGGGCATCGTATGATGTCCACCAGGTaGTTTTTGAAACTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EGRSVEGQRQNIRHIGHRMMSTR*FLKLFR Trigger: TCTGAAGAGTTTCAAAAACAACCTGGTGGACATCAT...ACGATGCCCAATGTGTCTGATATTTTGCCTTTGGCCTTCCACACTCCTTCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCTAAGATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCTTCATCATCCCCATTTaGCGTGTGAAAGTTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLAKMTKSWKENHGKNSGFIIPI*RVKVEA Trigger: GGCTTCAACTTTCACACGCAAAATGGGGATGATGAA...GCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCATCTTAGCCAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | ATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTCTAGTCCATGGAATCTTGAAGCGGTaGATAAGATCATATCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: IFEGIKILMPQPPGGLVHGILKR*IRSYLV Trigger: TACCAGATATGATCTTATCAACCGCTTCAAGATTCC...ATGGACTAGACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CAA 90 bp | TTTGCACCAATATTTGAAGGCATAAAGATCTTGATGCCGCAGCCACCAGGAGGTGAATATGGAAGTTGTTaGTTGTTCCTGTGTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FAPIFEGIKILMPQPPGGEYGSC*LFLCAH Trigger: ATGAGCACACAGGAACAACAAACAACTTCCATATTC...ACCTCCTGGTGGCTGCGGCATCAAGATCTTTATGCCTTCAAATATTGGTGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | AAGCTTCTTGTCATGTCCCTCTCTGAAATATTGCTTAGCCTTGAGGAACCTGGGGAATATGGAAGTTGTTaGTTGTTCCTGTGTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: KLLVMSLSEILLSLEEPGEYGSC*LFLCAH Trigger: ATGAGCACACAGGAACAACAAACAACTTCCATATTC...CCCAGGTTCCTCAAGGCTAAGCAATATTTCAGAGAGGGACATGACAAGAAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | AACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATGATCAATGAAACCTATTaGCGACTGGGCAACCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: NIPEGKFCLLFECPSPAMINETY*RLGNHC Trigger: ACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGAT...CATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | TCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGTCCACCAGGTTGTTTTaGAAACTCTTCAGATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SWKENHGKNSGQDPNDNSSTRLF*KLFRST Trigger: TGTGGATCTGAAGAGTTTCAAAAACAACCTGGTGGA...CGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATTTCATCATCCCCATTTaGCGTGTGAAAGTTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: MTKSWKENHGKNSGQDPNFIIPI*RVKVEA Trigger: GGCTTCAACTTTCACACGCAAAATGGGGATGATGAA...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGCAATGCTGCGAAACTTaGGTTTTTCTTCAGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RVTSAKRGATKYYLHQYLQCCET*VFLQAS Trigger: AGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATTG...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CAA 90 bp | AACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTTCTCCTGCAATGGAATATGGAAGTTGTTaGTTGTTCCTGTGTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: NIPEGKFCLLFECPSPAMEYGSC*LFLCAH Trigger: ATGAGCACACAGGAACAACAAACAACTTCCATATTC...CATTGCAGGAGAAGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATATCAATGAAACCTATTaGCGACTGGGCAACCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: MTKSWKENHGKNSGQDPNINETY*RLGNHC Trigger: ACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGAT...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGTCCACCAGGTTGTTTTaGAAACTCTTCAGATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RVTSAKRGATKYYLHQYLSTRLF*KLFRST Trigger: TGTGGATCTGAAGAGTTTCAAAAACAACCTGGTGGA...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CAA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATTCCACCAGGTTGTTTTaGAAACTCTTCAGATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: MTKSWKENHGKNSGQDPNSTRLF*KLFRST Trigger: TGTGGATCTGAAGAGTTTCAAAAACAACCTGGTGGA...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | TCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGATAACTCGATGATGTCCACCAGGTaGTTTTTGAAACTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SWKENHGKNSGQDPNDNSMMSTR*FLKLFR Trigger: TCTGAAGAGTTTCAAAAACAACCTGGTGGACATCAT...CGAGTTATCATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | TGTGTTTCCATATACACACACACACACACACACACACACACACACACACACACAATGATGTCCACCAGGTaGTTTTTGAAACTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: CVSIYTHTHTHTHTHTHTMMSTR*FLKLFR Trigger: TCTGAAGAGTTTCAAAAACAACCTGGTGGACATCAT...TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATATGGAAACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGTTCATCATCCCCATTTaGCGTGTGAAAGTTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VTSAKRGATKYYLHQYLKFIIPI*RVKVEA Trigger: GGCTTCAACTTTCACACGCAAAATGGGGATGATGAA...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CAA 90 bp | TTGTTGCGTCACTCTGGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCTTCATCATCCCCATTTaGCGTGTGAAAGTTGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLRHSGVTQCKLYIEIHSFIIPI*RVKVEA Trigger: GGCTTCAACTTTCACACGCAAAATGGGGATGATGAA...GGAATGGATTTCAATATACAACTTGCACTGTGTTACTCCAGAGTGACGCAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGGGAATCTTGAAGCGGTaGATAAGATCATATCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RVTSAKRGATKYYLHQYLGILKR*IRSYLV Trigger: TACCAGATATGATCTTATCAACCGCTTCAAGATTCC...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGGAATCTTGAAGCGGTaGATAAGATCATATCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: MTKSWKENHGKNSGQDPNGILKR*IRSYLV Trigger: TACCAGATATGATCTTATCAACCGCTTCAAGATTCC...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGTGGTAACAACATCCCAGAAGGAAAATTCTGTCTTCTCTTTGAGTGCCCTGGAATCTTGAAGCGGTaGATAAGATCATATCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSGNNIPEGKFCLLFECPGILKR*IRSYLV Trigger: TACCAGATATGATCTTATCAACCGCTTCAAGATTCC...AGGGCACTCAAAGAGAAGACAGAATTTTCCTTCTGGGATGTTGTTACCACTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | ATGACCAAATCATGGAAGGAAAACCATGGCAAAAACAGTGGCCAGGATCCTAATGAATATGGAAGTTGTTaGTTGTTCCTGTGTGCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: MTKSWKENHGKNSGQDPNEYGSC*LFLCAH Trigger: ATGAGCACACAGGAACAACAAACAACTTCCATATTC...ATTAGGATCCTGGCCACTGTTTTTGCCATGGTTTTCCTTCCATGATTTGGTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCATCTTCTATACAAGTTGCAACTTCCAAGTTTaGGCTGGGTGGCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVTQCKLYIEIHSIFYTSCNFQV*AGWLMS Trigger: TGACATCAGCCACCCAGCCAAAACTTGGAAGTTGCA...ACTTGTATAGAAGATGGAATGGATTTCAATATACAACTTGCACTGTGTTACTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGTCCACCAGGTTGTTTTaGAAACTCTTCAGATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VTSAKRGATKYYLHQYLKSTRLF*KLFRST Trigger: TGTGGATCTGAAGAGTTTCAAAAACAACCTGGTGGA...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | TCTGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTTCCACCAGGTTGTTTTaGAAACTCTTCAGATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SVYLEAHVISSVTPTYYLSTRLF*KLFRST Trigger: TGTGGATCTGAAGAGTTTCAAAAACAACCTGGTGGA...AAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
||
| CDS-3UTR CAA 90 bp | CGTGTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGATGATGTCCACCAGGTaGTTTTTGAAACTCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVTSAKRGATKYYLHQYLMMSTR*FLKLFR Trigger: TCTGAAGAGTTTCAAAAACAACCTGGTGGACATCAT...CAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGACACG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGGGAATCTTGAAGCGGTaGATAAGATCATATCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VTSAKRGATKYYLHQYLKGILKR*IRSYLV Trigger: TACCAGATATGATCTTATCAACCGCTTCAAGATTCC...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
||
| CDS-3UTR CAA 90 bp | TTGTTGCGTCACTCTGGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCGGAATCTTGAAGCGGTaGATAAGATCATATCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: LLRHSGVTQCKLYIEIHSGILKR*IRSYLV Trigger: TACCAGATATGATCTTATCAACCGCTTCAAGATTCC...GGAATGGATTTCAATATACAACTTGCACTGTGTTACTCCAGAGTGACGCAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGGAATATGGAAGTTGTTaGTTGTTCCTGTGTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: VTSAKRGATKYYLHQYLKEYGSC*LFLCAH Trigger: ATGAGCACACAGGAACAACAAACAACTTCCATATTC...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS-3UTR CAA 90 bp | TCTGTATATTTGGAGGCTCATGTGATCTCCAGTGTGACCCCTACTTATTATCTTGAATATGGAAGTTGTTaGTTGTTCCTGTGTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: SVYLEAHVISSVTPTYYLEYGSC*LFLCAH Trigger: ATGAGCACACAGGAACAACAAACAACTTCCATATTC...AAGATAATAAGTAGGGGTCACACTGGAGATCACATGAGCCTCCAAATATACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | GTCACCTCAGCAAAGAGAGGTGCCACAAAATACTATTTGCACCAATATTTGAAGATGATGTCCACCAGGTaGTTTTTGAAACTCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: VTSAKRGATKYYLHQYLKMMSTR*FLKLFR Trigger: TCTGAAGAGTTTCAAAAACAACCTGGTGGACATCAT...CTTCAAATATTGGTGCAAATAGTATTTTGTGGCACCTCTCTTTGCTGAGGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 |
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| CDS GCA 90 bp | ATCAAAAGACCATTTATCAACTTCCTTGAGTGTCACTATGACAGCTaGAGGATATGTCAAACCAACCATGTGATAGTTCTTCCTGTACAT | + |
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Preference number: 5 (lower is better) Translates to: IKRPFINFLECHYDS*RICQTNHVIVLPVH Trigger: ATGTACAGGAAGAACTATCACATGGTTGGTTTGACATATCCTGCAGCTGTCATAGTGACACTCAAGGAAGTTGATAAATGGTCTTTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | CAAAATAGATGTATTGTCTACGCCATGAGAGGAGCAGAGCTTCATTTTATTCTTATCAATGAAACCTATTaGCGACTGGGCAACCATTGT | + |
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Preference number: 5 (lower is better) Translates to: QNRCIVYAMRGAELHFILINETY*RLGNHC Trigger: ACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGAT...AAGAATAAAATGAAGCTCTGCTCCTCTCATGGCGTAGACAATACATCTATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | GGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCATCTTCTATACAAGTCAATGCTGCGAAACTTaGGTTTTTCTTCAGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GVTQCKLYIEIHSIFYTSQCCET*VFLQAS Trigger: AGAAGCCTGAAGAAAAACCAAAGTTTCGCAGCATTG...ACTTGTATAGAAGATGGAATGGATTTCAATATACAACTTGCACTGTGTTACTCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS-3UTR CAA 90 bp | GGAGTAACACAGTGCAAGTTGTATATTGAAATCCATTCCATCTTCTATACAAGTATGATGTCCACCAGGTaGTTTTTGAAACTCTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: GVTQCKLYIEIHSIFYTSMMSTR*FLKLFR Trigger: TCTGAAGAGTTTCAAAAACAACCTGGTGGACATCAT...ACTTGTATAGAAGATGGAATGGATTTCAATATACAACTTGCACTGTGTTACTCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS CCA 72 bp | GCCTCAGAGAGTCAGCAACATGGAACCCAATCATGGTaGACGAGCTGCTTGCCCCGTAGTTTGAAGACTGTG | + |
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Preference number: 6 (lower is better) Translates to: ASESQQHGTQSW*TSCLPRSLKTV Trigger: CACAGTCTTCAAACTACGGGGCAAGCAGCTCGTCCACCATGATTGGGTTCCATGTTGCTGACTCTCTGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS CAA 72 bp | AGTCTGGGGCATAGCTCCCATCACACACGGAGCCTTTaGTATTTGACCGCCTGCTTGCCCCGTAGTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLGHSSHHTRSL*YLTACLPRSLK Trigger: CTTCAAACTACGGGGCAAGCAGGCGGTCAAATACAAAAGGCTCCGTGTGTGATGGGAGCTATGCCCCAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134739.2 |
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| CDS CAA 72 bp | AGTCTGGGGCATAGCTCCCATCACACACGGAGCCTTTaGTATTTGACCGCCTCAGAGAGTCAGCAACATGGA | + |
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Preference number: 6 (lower is better) Translates to: SLGHSSHHTRSL*YLTASESQQHG Trigger: TCCATGTTGCTGACTCTCTGAGGCGGTCAAATACAAAAGGCTCCGTGTGTGATGGGAGCTATGCCCCAGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS TCA 72 bp | CACCAGGTTGTTTTTGAAACTCTTCAGATCCACAGCTaGGAGCGAGTAGTCTGGGGCATAGCTCCCATCACA | + |
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Preference number: 6 (lower is better) Translates to: HQVVFETLQIHS*ERVVWGIAPIT Trigger: TGTGATGGGAGCTATGCCCCAGACTACTCGCTCTCAGCTGTGGATCTGAAGAGTTTCAAAAACAACCTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
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| CDS GCA 72 bp | TCCCATCACACACGGAGCCTTTTGTATTTGACCGCCTaGTTGCCCCGTAGTTTGAAGACTGTGACTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SHHTRSLLYLTA*LPRSLKTVTLK Trigger: CTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCAGGCGGTCAAATACAAAAGGCTCCGTGTGTGATGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134739.2 |
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| CDS CAA 72 bp | CAGCAACATGGAACCCAATCATGGTGGACGAGCTGCTaGCCCCGTAGTTTGAAGACTGTGACTTTGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: QQHGTQSWWTSC*PRSLKTVTLKL Trigger: AAGCTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCAGCTCGTCCACCATGATTGGGTTCCATGTTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS CAA 72 bp | CATCACACACGGAGCCTTTTGTATTTGACCGCCTGCTaGCCCCGTAGTTTGAAGACTGTGACTTTGAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: HHTRSLLYLTAC*PRSLKTVTLKL Trigger: AAGCTTCAAAGTCACAGTCTTCAAACTACGGGGCAAGCAGGCGGTCAAATACAAAAGGCTCCGTGTGTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134739.2 |
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| CDS TCA 72 bp | CGGTCGTTGTACAGAATAGCAACGTCCGACCTCGTCTaGATATGGAAGTTGTTTGTTGTTCCTGTGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RSLYRIATSDLV*IWKLFVVPVCS Trigger: TGAGCACACAGGAACAACAAACAACTTCCATATTCAGACGAGGTCGGACGTTGCTATTCTGTACAACGACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
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| CDS GCA 72 bp | TGCTTCACTAAGCATCTTAGTATTCCCTTCAGGCGCTaGCACATCTTCTCGGTCTGTTCTCCAATGAGATAC | + |
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Preference number: 6 (lower is better) Translates to: CFTKHLSIPFRR*HIFSVCSPMRY Trigger: GTATCTCATTGGAGAACAGACCGAGAAGATGTGGCAGCGCCTGAAGGGAATACTAAGATGCTTAGTGAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000183775.8 |
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| CDS TCA 72 bp | ATCAATGAAACCTATTTGCGACTGGGCAACCATTGTTaGCTTCCGATCACAAAGTGGAGAAAATGGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: INETYLRLGNHC*LPITKWRKWKP Trigger: GGGCTTCCATTTTCTCCACTTTGTGATCGGAAGTCAACAATGGTTGCCCAGTCGCAAATAGGTTTCATTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
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| CDS TCA 72 bp | AGCTTCCTCTATAAGAGGAATGACAATTTTCTCTGTTaGGTCCGTCAGGAGAGAAAACGTTGGCTCCACTAT | + |
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Preference number: 6 (lower is better) Translates to: SFLYKRNDNFLC*VRQERKRWLHY Trigger: ATAGTGGAGCCAACGTTTTCTCTCCTGACGGACTCAACAGAGAAAATTGTCATTCCTCTTATAGAGGAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
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| CDS TCA 72 bp | CTGCATATTCGATATTCTTCTTTAGGTCAACAACGTTaGCATCACCTTTCTCCAGCTGCTTCACTAAGCATC | + |
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Preference number: 6 (lower is better) Translates to: LHIRYSSLGQQR*HHLSPAASLSI Trigger: GATGCTTAGTGAAGCAGCTGGAGAAAGGTGATGTCAACGTTGTTGACCTAAAGAAGAATATCGAATATGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
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| CDS GCA 72 bp | CCATTTATCAACTTCCTTGAGTGTCACTATGACAGCTaGAGGATATGTCAAACCAACCATGTGATAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: PFINFLECHYDS*RICQTNHVIVL Trigger: AAGAACTATCACATGGTTGGTTTGACATATCCTGCAGCTGTCATAGTGACACTCAAGGAAGTTGATAAATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
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| CDS CAA 90 bp | GAGCCAGTGCATGATACCTGTATGAAGCATTATATAATGCACAGTTaGAGTGACGTCAGCTGCATGGACCAAATTATGATATGGATTTTT | + |
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Preference number: 6 (lower is better) Translates to: EPVHDTCMKHYIMHS*SDVSCMDQIMIWIF Trigger: AAAAATCCATATCATAATTTGGTCCATGCAGCTGACGTCACTCAAACTGTGCATTATATAATGCTTCATACAGGTATCATGCACTGGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
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| CDS TCA 72 bp | TACCTGTATGAAGCATTATATAATGCACAGTTTGAGTaGCGTCAGCTGCATGGACCAAATTATGATATGGAT | + |
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Preference number: 6 (lower is better) Translates to: YLYEALYNAQFE*RQLHGPNYDMD Trigger: ATCCATATCATAATTTGGTCCATGCAGCTGACGTCACTCAAACTGTGCATTATATAATGCTTCATACAGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000090756.11 ENSMUST00000102651.10 ENSMUST00000102652.10 ENSMUST00000102653.8 ENSMUST00000102654.11 ENSMUST00000102655.10 ENSMUST00000134739.2 ENSMUST00000183775.8 |
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