Pregenerated sensors for PDE10A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023868Ensembl transcript IDs: ENSMUST00000024647.13, ENSMUST00000089085.10, ENSMUST00000115715.8, ENSMUST00000115717.9, ENSMUST00000115720.8, ENSMUST00000115724.9, ENSMUST00000136160.2, ENSMUST00000149440.8, ENSMUST00000233052.2
Found 666 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCCCTGCTCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATaGCCTCTGAGGTGTCTTGGCTGGGTGTGGATGGCGGCGGACCTC | + |
|
Preference number: 1 (lower is better) Translates to: CPCSSRCWPARRLSL*PLRCLGWVWMAADL Trigger: GAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | ACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTaGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: TGHTLMGGCRQEPLL*SLPPPDSAVLAWEQ Trigger: TTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 90 bp | GGATGGACACCGTCTGGGAGAAGTGGTGTTGCTCCATGGTGGAGGTaGAGTACAGCGCCGCCAGGGGGTGGTCGAACTTCTGCAGGTAGC | + |
|
Preference number: 1 (lower is better) Translates to: GWTPSGRSGVAPWWR*STAPPGGGRTSAGS Trigger: GCTACCTGCAGAAGTTCGACCACCCCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGCAACACCACTTCTCCCAGACGGTGTCCATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 90 bp | CTGCAGACCCATCCACTGAGGATCAGTTGCTGGGACCTGTGCCCCTaGTCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: LQTHPLRISCWDLCP*SSRCWPARRLSLWP Trigger: AGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCACAGGTCCCAGCAACTGATCCTCAGTGGATGGGTCTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | CAAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATaGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTC | + |
|
Preference number: 1 (lower is better) Translates to: QAAAWHRTRELATPS*EDAGKNLSCGLCPL Trigger: GAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 90 bp | CTGAGGATCAGTTGCTGGGACCTGTGCCCCTGCTCCAGCAGGTGTTaGCCAGCAAGGAGGTTGTCCCTATGGCCTCTGAGGTGTCTTGGC | + |
|
Preference number: 1 (lower is better) Translates to: LRISCWDLCPCSSRC*PARRLSLWPLRCLG Trigger: GCCAAGACACCTCAGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCACAGGTCCCAGCAACTGATCCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | GCTGAAGGATGGACACCGTCTGGGAGAAGTGGTGTTGCTCCATGGTaGAGGTGGAGTACAGCGCCGCCAGGGGGTGGTCGAACTTCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: AEGWTPSGRSGVAPW*RWSTAPPGGGRTSA Trigger: TGCAGAAGTTCGACCACCCCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGCAACACCACTTCTCCCAGACGGTGTCCATCCTTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | CCAGCTGAAGGATGGACACCGTCTGGGAGAAGTGGTGTTGCTCCATaGTGGAGGTGGAGTACAGCGCCGCCAGGGGGTGGTCGAACTTCT | + |
|
Preference number: 1 (lower is better) Translates to: PAEGWTPSGRSGVAP*WRWSTAPPGGGRTS Trigger: AGAAGTTCGACCACCCCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGCAACACCACTTCTCCCAGACGGTGTCCATCCTTCAGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 90 bp | GCTCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATGGCCTCTaGGGTGTCTTGGCTGGGTGTGGATGGCGGCGGACCTCTTTTGTT | + |
|
Preference number: 1 (lower is better) Translates to: APAGVGQQGGCPYGL*GVLAGCGWRRTSFV Trigger: AACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR GCA 90 bp | AGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATaGAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGT | + |
|
Preference number: 1 (lower is better) Translates to: SMAQNQGTGHTLMGG*RQEPLLWSLPPPDS Trigger: ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 90 bp | CGATCCGTCGGGCCAGCACTGGTCACTCTTCAGGCTGGAGGGAGCTaGGGACAGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: RSVGPALVTLQAGGS*GQDSIALFLARGRL Trigger: CAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGTGCTGGCCCGACGGATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | CCATTAAGGCTTTGGCTGCAGACCCATCCACTGAGGATCAGTTGCTaGGACCTGTGCCCCTGCTCCAGCAGGTGTTGGCCAGCAAGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: PLRLWLQTHPLRISC*DLCPCSSRCWPARR Trigger: CCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCACAGGTCCCAGCAACTGATCCTCAGTGGATGGGTCTGCAGCCAAAGCCTTAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR GCA 90 bp | ATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTaGAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGA | + |
|
Preference number: 1 (lower is better) Translates to: MQARTSPVVSAPSRQ*SAGLGANSIRRSGG Trigger: TCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 90 bp | ACTGGTCACTCTTCAGGCTGGAGGGAGCTGGGGACAGGATTCAATTaGTCTCTTCTTGGCAAGGGGAAGGCTGACCACCACCAGCCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: TGHSSGWRELGTGFN*SLLGKGKADHHQPS Trigger: GCTGGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | AGGCCTTCAGCAGAGGCTCTGTGGGTGGGAGGATCTGCGTCAAGGTaGTATAGCAGGGAATGGCCACAGCATTGTAGAATCCGAGCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: RPSAEALWVGGSASR*YSREWPQHCRIRAA Trigger: GGCAGCTCGGATTCTACAATGCTGTGGCCATTCCCTGCTATACCACCTTGACGCAGATCCTCCCACCCACAGAGCCTCTGCTGAAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 90 bp | TCGTCTGTCTTGGAGAAGGCGCTACCGCTGATCTTGTTCACCATCTaGACCACGCCAATCACGCTGCCTCGGCTCACTATGGGCATACAC | + |
|
Preference number: 1 (lower is better) Translates to: SSVLEKALPLILFTI*TTPITLPRLTMGIH Trigger: GTGTATGCCCATAGTGAGCCGAGGCAGCGTGATTGGCGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGCCTTCTCCAAGACAGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | AATATCTCAGCGATCCGTCGGGCCAGCACTGGTCACTCTTCAGGCTaGAGGGAGCTGGGGACAGGATTCAATTGCTCTCTTCTTGGCAAG | + |
|
Preference number: 1 (lower is better) Translates to: NISAIRRASTGHSSG*RELGTGFNCSLLGK Trigger: CTTGCCAAGAAGAGAGCAATTGAATCCTGTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGTGCTGGCCCGACGGATCGCTGAGATATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | GCAAGGAGGTTGTCCCTATGGCCTCTGAGGTGTCTTGGCTGGGTGTaGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCTGTGGAGAAA | + |
|
Preference number: 1 (lower is better) Translates to: ARRLSLWPLRCLGWV*MAADLFCYCVPVEK Trigger: TTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGGCCATAGGGACAACCTCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | TCCTCCCCAATGTCAAACAGGTCCGAGTACAGCTCCTTGTTCTTGTaGTCCACCTGGAAGAGCGCGCAGCGGTCGGCGTTCACTAGATTT | + |
|
Preference number: 1 (lower is better) Translates to: SSPMSNRSEYSSLFL*STWKSAQRSAFTRF Trigger: AAATCTAGTGAACGCCGACCGCTGCGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGACCTGTTTGACATTGGGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | GCTCTGTGGGTGGGAGGATCTGCGTCAAGGTGGTATAGCAGGGAATaGCCACAGCATTGTAGAATCCGAGCTGCCCTTGAGGGACTTCAT | + |
|
Preference number: 1 (lower is better) Translates to: ALWVGGSASRWYSRE*PQHCRIRAALEGLH Trigger: ATGAAGTCCCTCAAGGGCAGCTCGGATTCTACAATGCTGTGGCCATTCCCTGCTATACCACCTTGACGCAGATCCTCCCACCCACAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 90 bp | GGCAGTGACAATGGGCAAGCAAAGAACAGACTGGATGCGGGTTCCTaGTTCCAGGCCAGTACCTCGAGGAAATCGCTCATCCCCAAGGAT | + |
|
Preference number: 1 (lower is better) Translates to: GSDNGQAKNRLDAGS*FQASTSRKSLIPKD Trigger: ATCCTTGGGGATGAGCGATTTCCTCGAGGTACTGGCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTTGCCCATTGTCACTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 90 bp | GTTTGGTCACAGAGCAAAGATCACAGGCAGTCATCATCAAGCCGATaGCACGGTCTCGATGGGACTGGTTGTGGAGGTTCAGCGACCCTG | + |
|
Preference number: 1 (lower is better) Translates to: VWSQSKDHRQSSSSR*HGLDGTGCGGSATL Trigger: CAGGGTCGCTGAACCTCCACAACCAGTCCCATCGAGACCGTGTCATCGGCTTGATGATGACTGCCTGTGATCTTTGCTCTGTGACCAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | ACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTaGAGCAGACTCACCTATGTGCCCCCAGATAGACTGAAAGAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: TLCPLDEGRGMLPSE*SRLTYVPPDRLKEH Trigger: ATGCTCTTTCAGTCTATCTGGGGGCACATAGGTGAGTCTGCTCCACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 90 bp | TTTGCCATTATGGGAGAATATCTCAGCGATCCGTCGGGCCAGCACTaGTCACTCTTCAGGCTGGAGGGAGCTGGGGACAGGATTCAATTG | + |
|
Preference number: 1 (lower is better) Translates to: FAIMGEYLSDPSGQH*SLFRLEGAGDRIQL Trigger: CAATTGAATCCTGTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGTGCTGGCCCGACGGATCGCTGAGATATTCTCCCATAATGGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | TGTTCACCATCTGCACCACGCCAATCACGCTGCCTCGGCTCACTATaGGCATACACAGAATGTTCCTCGTGGTGTAGCCTGTGTACAGGT | + |
|
Preference number: 1 (lower is better) Translates to: CSPSAPRQSRCLGSL*AYTECSSWCSLCTG Trigger: ACCTGTACACAGGCTACACCACGAGGAACATTCTGTGTATGCCCATAGTGAGCCGAGGCAGCGTGATTGGCGTGGTGCAGATGGTGAACA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | CAAAGATCACAGGCAGTCATCATCAAGCCGATGACACGGTCTCGATaGGACTGGTTGTGGAGGTTCAGCGACCCTGTCTGGTACATCTCC | + |
|
Preference number: 1 (lower is better) Translates to: QRSQAVIIKPMTRSR*DWLWRFSDPVWYIS Trigger: GGAGATGTACCAGACAGGGTCGCTGAACCTCCACAACCAGTCCCATCGAGACCGTGTCATCGGCTTGATGATGACTGCCTGTGATCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 90 bp | GGTGACTGTCGAGTCAGCCTGACACTTTGCAACAGGGGGAGTCTGTaGCTGATGGAGAGTCATCCAAGAATCCTACTGCGCACAGCATCA | + |
|
Preference number: 1 (lower is better) Translates to: GDCRVSLTLCNRGSL*LMESHPRILLRTAS Trigger: TGATGCTGTGCGCAGTAGGATTCTTGGATGACTCTCCATCAGTCACAGACTCCCCCTGTTGCAAAGTGTCAGGCTGACTCGACAGTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR GCA 90 bp | TTCGGTCTGTTTGGCGAGACCTCTACACACCTGCACCTGGTGTATTaGTACGGAAGCCCAAGCAAGATTGGCTGTTGCAACCTCCTGATG | + |
|
Preference number: 1 (lower is better) Translates to: FGLFGETSTHLHLVY*YGSPSKIGCCNLLM Trigger: CATCAGGAGGTTGCAACAGCCAATCTTGCTTGGGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAGAGGTCTCGCCAAACAGACCGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 90 bp | AGCAGGCCTTTGCGCTCGAGGTCTGTGAAGAGGCCATTGTTGTTTTaGAGTATGGCATACATGCAGTGTGCCACCGTGACTGCATGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: SRPLRSRSVKRPLLF*SMAYMQCATVTACF Trigger: GAAGCATGCAGTCACGGTGGCACACTGCATGTATGCCATACTTCAAAACAACAATGGCCTCTTCACAGACCTCGAGCGCAAAGGCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | ATCAAGTCTCCAATGGCAGTGACAATGGGCAAGCAAAGAACAGACTaGATGCGGGTTCCTGATTCCAGGCCAGTACCTCGAGGAAATCGC | + |
|
Preference number: 1 (lower is better) Translates to: IKSPMAVTMGKQRTD*MRVPDSRPVPRGNR Trigger: GCGATTTCCTCGAGGTACTGGCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTTGCCCATTGTCACTGCCATTGGAGACTTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 90 bp | TGTGAAGAGGCCATTGTTGTTTTGAAGTATGGCATACATGCAGTGTaGCACCGTGACTGCATGCTTCCAGTTGTGGTAAGGAACCCGCCG | + |
|
Preference number: 1 (lower is better) Translates to: CEEAIVVLKYGIHAV*HRDCMLPVVVRNPP Trigger: CGGCGGGTTCCTTACCACAACTGGAAGCATGCAGTCACGGTGGCACACTGCATGTATGCCATACTTCAAAACAACAATGGCCTCTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | ACAAAGATCCCAGGCCACATGTTCTCGAAAGGACCAATGTCAAAGTaGAATAGCTCGATGTCCCGGCAGATGCGTGCTGGTAGGTTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: TKIPGHMFSKGPMSK*NSSMSRQMRAGRLK Trigger: CTTCAACCTACCAGCACGCATCTGCCGGGACATCGAGCTATTCCACTTTGACATTGGTCCTTTCGAGAACATGTGGCCTGGGATCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 90 bp | TCAGCCCACTCCGCTACAACCGTGGGTCAGAGTGTGGAAGGAAACTaGATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATTGG | + |
|
Preference number: 1 (lower is better) Translates to: SAHSATTVGQSVEGN*IDFANAKLLCVWYW Trigger: CCAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACACTCTGACCCACGGTTGTAGCGGAGTGGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 90 bp | ATACGCTTGGTGACAGAATCCATGCGCTCATGCCTTCGGAATGCCTaGATTAAACGGTCGTCTTACATGCTGCTCCTCCCTGCAATTCAG | + |
|
Preference number: 1 (lower is better) Translates to: IRLVTESMRSCLRNA*IKRSSYMLLLPAIQ Trigger: CTGAATTGCAGGGAGGAGCAGCATGTAAGACGACCGTTTAATTCAGGCATTCCGAAGGCATGAGCGCATGGATTCTGTCACCAAGCGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 90 bp | AGGGTCCGCGTAGGCATCGGGAATGTTCAAGACTTCGCCTGTTCTTaGCACTTGACCAGCAATCCCTTTCTCAATGGAAAATCTGATCTC | + |
|
Preference number: 1 (lower is better) Translates to: RVRVGIGNVQDFACS*HLTSNPFLNGKSDL Trigger: GAGATCAGATTTTCCATTGAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGCGAAGTCTTGAACATTCCCGATGCCTACGCGGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 90 bp | AGTGCCTGTACAGTTCAAGGATGCCAATCAAGTCTCCAATGGCAGTaGCAATGGGCAAGCAAAGAACAGACTGGATGCGGGTTCCTGATT | + |
|
Preference number: 1 (lower is better) Translates to: SACTVQGCQSSLQWQ*QWASKEQTGCGFLI Trigger: AATCAGGAACCCGCATCCAGTCTGTTCTTTGCTTGCCCATTGTCACTGCCATTGGAGACTTGATTGGCATCCTTGAACTGTACAGGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | TTGAAATTCTTTCTTTCCCCTTCAAAAGAGAGCCCATTAAGGCTTTaGCTGCAGACCCATCCACTGAGGATCAGTTGCTGGGACCTGTGC | + |
|
Preference number: 1 (lower is better) Translates to: LKFFLSPSKESPLRL*LQTHPLRISCWDLC Trigger: GCACAGGTCCCAGCAACTGATCCTCAGTGGATGGGTCTGCAGCCAAAGCCTTAATGGGCTCTCTTTTGAAGGGGAAAGAAAGAATTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR TCA 90 bp | CAAAGATTCATCTTAAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTaGGTGAGTGTTTCTGGTCAGTCTCTTCCTTCTCAAGGCTCACCG | + |
|
Preference number: 1 (lower is better) Translates to: QRFILKYLLLLLPEC*VSVSGQSLPSQGSP Trigger: CGGTGAGCCTTGAGAAGGAAGAGACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTTAAGATGAATCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 90 bp | TGCGCTCATGCCTTCGGAATGCCTGAATTAAACGGTCGTCTTACATaGTGCTCCTCCCTGCAATTCAGATTCCAAGATGATAGAAGATCA | + |
|
Preference number: 1 (lower is better) Translates to: CAHAFGMPELNGRLT*CSSLQFRFQDDRRS Trigger: TGATCTTCTATCATCTTGGAATCTGAATTGCAGGGAGGAGCAGCATGTAAGACGACCGTTTAATTCAGGCATTCCGAAGGCATGAGCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 90 bp | TCACATGATACTATTTCACAAGAGACTGACCAGCCAATAAATCTCTaGCAGGTTCCTCTGCAAAACTGCCCCAGGCAGGGCAAATTCAAG | + |
|
Preference number: 1 (lower is better) Translates to: SHDTISQETDQPINL*QVPLQNCPRQGKFK Trigger: CTTGAATTTGCCCTGCCTGGGGCAGTTTTGCAGAGGAACCTGCCAGAGATTTATTGGCTGGTCAGTCTCTTGTGAAATAGTATCATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 90 bp | GCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCTGTGGACTGTaGCCTTCATTACATGTGTCCCAGGCCACAAACTCAGTTAACCTA | + |
|
Preference number: 1 (lower is better) Translates to: APVINSLDFSVTCGL*PSLHVSQATNSVNL Trigger: TAGGTTAACTGAGTTTGTGGCCTGGGACACATGTAATGAAGGTCACAGTCCACAGGTGACAGAGAAATCCAAACTGTTGATTACAGGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 90 bp | CGCTACAACCGTGGGTCAGAGTGTGGAAGGAAACTGAATAGACTTTaGAAATGCCAAGCTCCTGTGTGTATGGTATTGGGTGTATCAAAA | + |
|
Preference number: 1 (lower is better) Translates to: RYNRGSECGRKLNRL*KCQAPVCMVLGVSK Trigger: TTTTGATACACCCAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACACTCTGACCCACGGTTGTAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 90 bp | TATAGTAAGGAGCAGGCAGACTGGTCACAGCCTGCCTTCCACTACTaGGCACTTTGTCATTGCATGAAATGCTTTAAATACGTTCATCGA | + |
|
Preference number: 1 (lower is better) Translates to: YSKEQADWSQPAFHY*ALCHCMKCFKYVHR Trigger: TCGATGAACGTATTTAAAGCATTTCATGCAATGACAAAGTGCTCAGTAGTGGAAGGCAGGCTGTGACCAGTCTGCCTGCTCCTTACTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 90 bp | GGACCTCTTTTGTTACTGTGTTCCTGTGGAGAAAGCTGCTCTCCTTaGAAAGAATCCAGACGCTGCGTTTGTTCTTATGTTAAGTGTTTC | + |
|
Preference number: 1 (lower is better) Translates to: GPLLLLCSCGESCSP*KESRRCVCSYVKCF Trigger: GAAACACTTAACATAAGAACAAACGCAGCGTCTGGATTCTTTCCAAGGAGAGCAGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR TCA 90 bp | GTTTGTTCTTATGTTAAGTGTTTCACAGTGTTCTGGGCAAGTACGTaGTTTTTAAATAGGTGGGGCACTGTACACAGAGAGAGACTGCTT | + |
|
Preference number: 1 (lower is better) Translates to: VCSYVKCFTVFWAST*FLNRWGTVHRERLL Trigger: AAGCAGTCTCTCTCTGTGTACAGTGCCCCACCTATTTAAAAATCACGTACTTGCCCAGAACACTGTGAAACACTTAACATAAGAACAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | GTGCCCTTCCAGCTGAAGGATGGACACCGTCTGGGAGAAGTGGTGTaGCTCCATGGTGGAGGTGGAGTACAGCGCCGCCAGGGGGTGGTC | + |
|
Preference number: 2 (lower is better) Translates to: VPFQLKDGHRLGEVV*LHGGGGVQRRQGVV Trigger: GACCACCCCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGCAACACCACTTCTCCCAGACGGTGTCCATCCTTCAGCTGGAAGGGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGGGAGTAGCCGACGTCTaGACACGGCAGAGCCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: QGTGHTLMGGCRQEPLLWGVADV*TRQSLG Trigger: ACCCAGGCTCTGCCGTGTTCAGACGTCGGCTACTCC...CCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGCCCCTGCTCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATGGCCTCTCCTGTGTCCCCTGGATaGGGGCAGAGGTATGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VPLLQQVLASKEVVPMASPVSPG*GQRYAS Trigger: GGAAGCATACCTCTGCCCTCATCCAGGGGACACAGG...AGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTGGAGTAGCCGACGTCTaGACACGGCAGAGCCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPGVADV*TRQSLG Trigger: ACCCAGGCTCTGCCGTGTTCAGACGTCGGCTACTCC...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGGAGTAGCCGACGTCTaGACACGGCAGAGCCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSGVADV*TRQSLG Trigger: ACCCAGGCTCTGCCGTGTTCAGACGTCGGCTACTCC...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCGGAGTAGCCGACGTCTaGACACGGCAGAGCCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: ELATPSWEDAGKNLSCGLGVADV*TRQSLG Trigger: ACCCAGGCTCTGCCGTGTTCAGACGTCGGCTACTCC...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCTGTTGCAACCTCCTaGTGGCTGAGGCAGAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLAVATS*WLRQKA Trigger: GGCCTTCTGCCTCAGCCATCAGGAGGTTGCAACAGC...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGAACACGGCAGAGCCTaGGTTGCTCACTGTCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLEHGRA*VAHCPR Trigger: CCTCGGACAGTGAGCAACCCAGGCTCTGCCGTGTTC...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 90 bp | ACTGAGGATCAGTTGCTGGGACCTGTGCCCCTGCTCCAGCAGGTGTaGGCCAGCAAGGAGGTTGTCCCTATGGCCTCTGAGGTGTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: TEDQLLGPVPLLQQV*ASKEVVPMASEVSW Trigger: CCAAGACACCTCAGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCACAGGTCCCAGCAACTGATCCTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | CCCTCCTTCTCCTCCCCAATGTCAAACAGGTCCGAGTACAGCTCCTaGTTCTTGTGGTCCACCTGGAAGAGCGCGCAGCGGTCGGCGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PSFSSPMSNRSEYSS*FLWSTWKSAQRSAF Trigger: GAACGCCGACCGCTGCGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGACCTGTTTGACATTGGGGAGGAGAAGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCAGGTGTGCTCTTGCTAGGCGCCGGGCCTGGGCCTGAAATCCACATTGCTAAGCGCATGAGGCCTTaGCACTCCTCGGAGGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FSGVLLLGAGPGPEIHIAKRMRP*HSSEVQ Trigger: CTGCACCTCCGAGGAGTGGCAAGGCCTCATGCGCTT...AGCAATGTGGATTTCAGGCCCAGGCCCGGCGCCTAGCAAGAGCACACCTGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCACAGAACCAGGGAACTaGCCACACCCTCATGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFTEPGN*PHPHGR Trigger: CCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGT...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCGCTACCGCTGATCTTGTTCACCATCTGCACCACGCCAATCACGCTGCCTCGGTACCCTGTGTCCCCTaGATGAGGGCAGAGGTATGC | + |
|
Preference number: 2 (lower is better) Translates to: GATADLVHHLHHANHAASVPCVP*MRAEVC Trigger: GCATACCTCTGCCCTCATCCAGGGGACACAGGGTAC...CGAGGCAGCGTGATTGGCGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTGACCACCACCAGCCCGGAGTAGCCGACGTCTaGACACGGCAGAGCCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: TGFNCSLLGKGKADHHQPGVADV*TRQSLG Trigger: ACCCAGGCTCTGCCGTGTTCAGACGTCGGCTACTCC...GGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGCAACCTCCTGATGGCTaGGGCAGAAGGCCTCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLQPPDG*GRRPLC Trigger: GCAAAGAGGCCTTCTGCCTCAGCCATCAGGAGGTTG...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGCCCCTGCTCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATGGCCTCTCCCATTCCTAACCAATaGCACCAAGCAGCAGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: VPLLQQVLASKEVVPMASPIPNQ*HQAAAW Trigger: CCATGCTGCTGCTTGGTGGCATTGGTTAGGAATGGG...AGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCACCAAGCAGCAGCATaGCACAGAACCAGGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFHQAAA*HRTREL Trigger: CAGTTCCCTGGTTCTGTGCCATGCTGCTGCTTGGTG...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCTGAGGTGTCTTGGCTGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTGGTCACTCTTCAGGCTaGAGGGAGCTGGGGACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PLRCLGWVWMAADLFCYCGHSSG*RELGTG Trigger: TCCTGTCCCCAGCTCCCTCCAGCCTGAAGAGTGACC...ACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | TCAAAGTGGAATAGCTCGATGTCCCGGCAGATGCGTGCTGGTAGGTaGAAGCGCATGAGGCCTTGCCACTCCTCGGAGGTGCAGATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SKWNSSMSRQMRAGR*KRMRPCHSSEVQML Trigger: CAGCATCTGCACCTCCGAGGAGTGGCAAGGCCTCATGCGCTTCAACCTACCAGCACGCATCTGCCGGGACATCGAGCTATTCCACTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTAGTGCAGTGCTGGCCTaGGAGCAAATAGCATTCGGA | + |
|
Preference number: 2 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLSAVLA*EQIAFG Trigger: TCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCACCTGGTGAACAGGGATGCCCCTACCAGGGACACGCCTCCTTAAAAGTTCTGGCCACACCCTCATaGGAGGATGCAGGCAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QAPGEQGCPYQGHASLKVLATPS*EDAGKN Trigger: GTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAG...AACTTTTAAGGAGGCGTGTCCCTGGTAGGGGCATCCCTGTTCACCAGGTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTACAGAACCAGGGAACTaGCCACACCCTCATGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLTEPGN*PHPHGR Trigger: CCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGT...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGGGGAGGGGAGGGTACCCTGTGTCCCCTaGATGAGGGCAGAGGTATGC | + |
|
Preference number: 2 (lower is better) Translates to: LYKGIGAVAEGYSEGEGRVPCVP*MRAEVC Trigger: GCATACCTCTGCCCTCATCCAGGGGACACAGGGTAC...CCTCCCCTCCCCCTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 90 bp | TTCTCCTCCCCAATGTCAAACAGGTCCGAGTACAGCTCCTTGTTCTaGTGGTCCACCTGGAAGAGCGCGCAGCGGTCGGCGTTCACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: FSSPMSNRSEYSSLF*WSTWKSAQRSAFTR Trigger: TCTAGTGAACGCCGACCGCTGCGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGACCTGTTTGACATTGGGGAGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTAGTGCAGTGCTGGCCTaGGAGCAAATAGCATTCGGA | + |
|
Preference number: 2 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPSAVLA*EQIAFG Trigger: TCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCACCAAGCAGCAGCATaGCACAGAACCAGGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLHQAAA*HRTREL Trigger: CAGTTCCCTGGTTCTGTGCCATGCTGCTGCTTGGTG...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGCCCCTGCTCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATGGCCTCTATGCTTCCTTCTGAGTaGAGCAGACTCACCTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: VPLLQQVLASKEVVPMASMLPSE*SRLTYV Trigger: CACATAGGTGAGTCTGCTCCACTCAGAAGGAAGCAT...AGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | CTTCAGGCTGGAGGGAGCTGGGGACAGGATTCAATTGCTCTCTTCTaGGCAAGGGGAAGGCTGACCACCACCAGCCCAGCATACTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: LQAGGSWGQDSIALF*ARGRLTTTSPAYFT Trigger: AGTAAAGTATGCTGGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGTCCCCAGCTCCCTCCAGCCTGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCTGTGGAGAAAGCTTGTCCCTATGGCCTCTaGGGTGTCTTGGCTGGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: WVWMAADLFCYCVPVEKACPYGL*GVLAGC Trigger: ACACCCAGCCAAGACACCTCAGAGGCCATAGGGACA...AGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTGACCACCACCAGCCCTGGGAGAAGTGGTGTTaGTCCATGGTGGAGGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: TGFNCSLLGKGKADHHQPWEKWC*SMVEVE Trigger: CTCCACCTCCACCATGGAGCAACACCACTTCTCCCA...GGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTAGTGCAGTGCTGGCCTaGGAGCAAATAGCATTCGGA | + |
|
Preference number: 2 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLSAVLA*EQIAFG Trigger: TCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCACCTGGTGAACAGGGATGCCCCTACCAGGGACACGCCTCCTTAAAAGTTCTACACACCTGCACCTaGTGTATTGCTACGGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QAPGEQGCPYQGHASLKVLHTCT*CIATEA Trigger: GGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAG...AACTTTTAAGGAGGCGTGTCCCTGGTAGGGGCATCCCTGTTCACCAGGTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | TTGAAGTTGTTCTCGTCTGTCTTGGAGAAGGCGCTACCGCTGATCTaGTTCACCATCTGCACCACGCCAATCACGCTGCCTCGGCTCACT | + |
|
Preference number: 2 (lower is better) Translates to: LKLFSSVLEKALPLI*FTICTTPITLPRLT Trigger: AGTGAGCCGAGGCAGCGTGATTGGCGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGCCTTCTCCAAGACAGACGAGAACAACTTCAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | AGCGATCCGTCGGGCCAGCACTGGTCACTCTTCAGGCTGGAGGGAGCTGGGGACCCAATCCTGCCTGTGTaGATTCTAAAACCAAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: SDPSGQHWSLFRLEGAGDPILPV*ILKPNY Trigger: ATAATTTGGTTTTAGAATTCACACAGGCAGGATTGG...GTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGTGCTGGCCCGACGGATCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCACCTGGTGAACAGGGATGCCCCTACCAGGGACACGCCTCCTTAAAAGTTTGCCTCGGCTCACTATaGGCATACACAGAATGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QAPGEQGCPYQGHASLKVCLGSL*AYTECS Trigger: GGAACATTCTGTGTATGCCCATAGTGAGCCGAGGCA...AACTTTTAAGGAGGCGTGTCCCTGGTAGGGGCATCCCTGTTCACCAGGTGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCTGTGGAGAAAGCTAGTGGTGTTGCTCCATaGTGGAGGTGGAGTACAGCG | + |
|
Preference number: 2 (lower is better) Translates to: WVWMAADLFCYCVPVEKASGVAP*WRWSTA Trigger: CGCTGTACTCCACCTCCACCATGGAGCAACACCACT...AGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | GTTCGGTCTGTTTGGCGAGACCTCTACACACCTGCACCTGGTGTATaGCTACGGAAGCCCAAGCAAGATTGGCTGTTGCAACCTCCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: VRSVWRDLYTPAPGV*LRKPKQDWLLQPPD Trigger: ATCAGGAGGTTGCAACAGCCAATCTTGCTTGGGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAGAGGTCTCGCCAAACAGACCGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTGACCACCACCAGCCCGTCACCTGTGGACTGTaGCCTTCATTACATGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TGFNCSLLGKGKADHHQPVTCGL*PSLHVS Trigger: GGACACATGTAATGAAGGTCACAGTCCACAGGTGAC...GGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | CAATGCCAGGGTCCTTTTATACGCTTGGTGACAGAATCCATGCGCTCATGCCTTTTGTGCCCTTCCAGCTaGAGGATGGACACCGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: QCQGPFIRLVTESMRSCLLCPSS*RMDTVW Trigger: CCAGACGGTGTCCATCCTTCAGCTGGAAGGGCACAA...AAGGCATGAGCGCATGGATTCTGTCACCAAGCGTATAAAAGGACCCTGGCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTGTGCCTGTCCTGCCTGATTaGACCGTGAGGAGACGGATC | + |
|
Preference number: 2 (lower is better) Translates to: CENRIAMQVEAVADSLCVPVLPD*TVRRRI Trigger: GATCCGTCTCCTCACGGTGCAATCAGGCAGGACAGG...CACACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | CAATGCCAGGGTCCTTTTATACGCTTGGTGACAGAATCCATGCGCTCATGCCTTTCTGGCAGGTTCCTCTaGAAAACTGCCCCAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: QCQGPFIRLVTESMRSCLSGRFL*KTAPGR Trigger: CCTGCCTGGGGCAGTTTTGCAGAGGAACCTGCCAGA...AAGGCATGAGCGCATGGATTCTGTCACCAAGCGTATAAAAGGACCCTGGCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCTGTGGAGAAAGCTGAGAATGATGGGCTCTaGTGGGCACCCCTGATTTCA | + |
|
Preference number: 2 (lower is better) Translates to: WVWMAADLFCYCVPVEKAENDGL*WAPLIS Trigger: TGAAATCAGGGGTGCCCAGCAGAGCCCATCATTCTC...AGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCCAAGAACCTCTCCTGTaGTCTCTGCCCCCTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: KVSSPAPARVLSECFWSVQEPLL*SLPPPD Trigger: GTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTG...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 90 bp | GCACAGTGCAAGGCCAGTGCGCAGAAGACAGCAAACATCTTGAAGTaGTTCTCGTCTGTCTTGGAGAAGGCGCTACCGCTGATCTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: AQCKASAQKTANILK*FSSVLEKALPLILF Trigger: GAACAAGATCAGCGGTAGCGCCTTCTCCAAGACAGACGAGAACAACTTCAAGATGTTTGCTGTCTTCTGCGCACTGGCCTTGCACTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTGTGCTCCTGCCAGAGTGCTaGGTGAGTGTTTCTGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: CENRIAMQVEAVADSLCVLLPEC*VSVSGQ Trigger: CTGACCAGAAACACTCACTCAGCACTCTGGCAGGAG...CACACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCCTCCTGCCAGAGTGCTaGGTGAGTGTTTCTGGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: KVSSPAPARVLSECFWSVLLPEC*VSVSGQ Trigger: CTGACCAGAAACACTCACTCAGCACTCTGGCAGGAG...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | CAATGCCAGGGTCCTTTTATACGCTTGGTGACAGAATCCATGCGCTCATGCCTTACTGTCGAGTCAGCCTaGCACTTTGCAACAGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: QCQGPFIRLVTESMRSCLTVESA*HFATGG Trigger: TCCCCCTGTTGCAAAGTGTCAGGCTGACTCGACAGT...AAGGCATGAGCGCATGGATTCTGTCACCAAGCGTATAAAAGGACCCTGGCATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGGCACCTGGTGAACAGGGATGCCCCTACCAGGGACACGCCTCCTTAAAAGTTCTGAGTCTTGGCCCATaGAAGGAACAATGTTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: QAPGEQGCPYQGHASLKVLSLGP*KEQCCK Trigger: TTTGCAACATTGTTCCTTCCATGGGCCAAGACTCAG...AACTTTTAAGGAGGCGTGTCCCTGGTAGGGGCATCCCTGTTCACCAGGTGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | CAATGCCAGGGTCCTTTTATACGCTTGGTGACAGAATCCATGCGCTCATGCCTTACCGTCTGGGAGAAGTaGTGTTGCTCCATGGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QCQGPFIRLVTESMRSCLTVWEK*CCSMVE Trigger: CTCCACCATGGAGCAACACCACTTCTCCCAGACGGT...AAGGCATGAGCGCATGGATTCTGTCACCAAGCGTATAAAAGGACCCTGGCATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | AGTGCGCAGAAGACAGCAAACATCTTGAAGTTGTTCTCGTCTGTCTaGGAGAAGGCGCTACCGCTGATCTTGTTCACCATCTGCACCACG | + |
|
Preference number: 2 (lower is better) Translates to: SAQKTANILKLFSSV*EKALPLILFTICTT Trigger: CGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGCCTTCTCCAAGACAGACGAGAACAACTTCAAGATGTTTGCTGTCTTCTGCGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTGAGGTGTCTTGGCTGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTTTCTTTGACATGGTTTaGAGTGAGAGCTTCAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PLRCLGWVWMAADLFCYCFFDMV*SESFSS Trigger: GGAACTGAAGCTCTCACTTCAAACCATGTCAAAGAA...ACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGAACAACCGAACCGGGATTCTCTGGTCTCCATGCTATCCTGAAAATCCCCTGGATGTCTGAATGGTaGGAGGAGATACCATCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VRTTEPGFSGLHAILKIPWMSEW*EEIPSG Trigger: CCCAGATGGTATCTCCTCTCACCATTCAGACATCCA...GGGGATTTTCAGGATAGCATGGAGACCAGAGAATCCCGGTTCGGTTGTTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGTGGGTGGGAGGATCTGCGTCAAGGTGGTATAGCAGGGAATGGCCACAGCATAGACAGCAAACATCTTaGAGTTGTTCTCGTCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: LWVGGSASRWYSREWPQHRQQTS*SCSRLS Trigger: AGACAGACGAGAACAACTTCAAGATGTTTGCTGTCT...ATGCTGTGGCCATTCCCTGCTATACCACCTTGACGCAGATCCTCCCACCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | CAATGCCAGGGTCCTTTTATACGCTTGGTGACAGAATCCATGCGCTCATGCCTTCCCATTCCTAACCAATaGCACCAAGCAGCAGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: QCQGPFIRLVTESMRSCLPIPNQ*HQAAAW Trigger: CCATGCTGCTGCTTGGTGGCATTGGTTAGGAATGGG...AAGGCATGAGCGCATGGATTCTGTCACCAAGCGTATAAAAGGACCCTGGCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | GTGCCCCTGCTCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATGGCCTCTTTTACCCACAAGATTTaGTTGCTGGAGGAAATTTAT | + |
|
Preference number: 2 (lower is better) Translates to: VPLLQQVLASKEVVPMASFTHKI*LLEEIY Trigger: ATAAATTTCCTCCAGCAAGCAAATCTTGTGGGTAAA...AGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTGCCATTATGGGAGAATATCTCAGCGATCCGTCGGGCCAGCACTGGTCACGATCGAATGGCTTTTTaGTGCAGCCAGTGTCACCTG | + |
|
Preference number: 2 (lower is better) Translates to: FLPLWENISAIRRASTGHDRMAF*CSQCHL Trigger: CAGGTGACACTGGCTGCAGCAAAAAGCCATTCGATC...GTGACCAGTGCTGGCCCGACGGATCGCTGAGATATTCTCCCATAATGGCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | GCAAAAACAGTCCGTCATAGGTTTCCCAATGCCAGGGTCCTTTTATACGCTTGGGTCTCTAAGGCGTTGTaGAGCAGAAGGCAGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: AKTVRHRFPNARVLLYAWVSKAL*SRRQAV Trigger: CACAGCCTGCCTTCTGCTGCACAACGCCTTAGAGAC...CCAAGCGTATAAAAGGACCCTGGCATTGGGAAACCTATGACGGACTGTTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTGTGAGTGCAGTGCTGGCCTaGGAGCAAATAGCATTCGGA | + |
|
Preference number: 2 (lower is better) Translates to: CENRIAMQVEAVADSLCVSAVLA*EQIAFG Trigger: TCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT...CACACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATTGCCTGTGTCCCCTGGATaGGGGCAGAGGTATGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GRKLNRLCKCQAPVCMVLPVSPG*GQRYAS Trigger: GGAAGCATACCTCTGCCCTCATCCAGGGGACACAGG...CAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTGAGGTGTCTTGGCTGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTTATTTCACAAGAGACTaGCCAGCCAATAAATCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: PLRCLGWVWMAADLFCYCYFTRD*PANKSL Trigger: CAGAGATTTATTGGCTGGTCAGTCTCTTGTGAAATA...ACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTGTGCAGCCTGTGTGTGACTaGCTCAGATTTTACGGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: CENRIAMQVEAVADSLCVQPVCD*LRFYGD Trigger: GTCACCGTAAAATCTGAGTCAGTCACACACAGGCTG...CACACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACCTCTCCTGTGGTCTCTaGCCCCTCCAGACAGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHLSCGL*PLQTVQ Trigger: CTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAG...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTGACCACCACCAGCCCTGGAAGGAACAATGTTaGAAAGGTCTTCCCAGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: TGFNCSLLGKGKADHHQPWKEQC*KGLPRY Trigger: ATACCTGGGAAGACCTTTGCAACATTGTTCCTTCCA...GGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | TTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTCCCATGAACACGGCAGAGCCTaGGTTGCTCACTGTCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LTYKKVTCKLHNKGRVSHEHGRA*VAHCPR Trigger: CCTCGGACAGTGAGCAACCCAGGCTCTGCCGTGTTC...ATGGGACACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTAGAACACGGCAGAGCCTaGGTTGCTCACTGTCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CGRKLNRLCKCQAPVCMVEHGRA*VAHCPR Trigger: CCTCGGACAGTGAGCAACCCAGGCTCTGCCGTGTTC...TACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | ATCATTTATAGTCACTGTTCTAGATACAGCAGAAGACCGGGGGATCGGGGTGACGGTGAGACAAGAGGGTaGGAAAAGCTAAGAGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: IIYSHCSRYSRRPGDRGDGETRG*EKLRGR Trigger: CCTGCCTCTTAGCTTTTCCCACCCTCTTGTCTCACC...GTCACCCCGATCCCCCGGTCTTCTGCTGTATCTAGAACAGTGACTATAAATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCACTGATGGGAGAACACACTCATGATAATTTCCTTATGGAGAGCTACCTGCCTGCTCGTACTCGCTaGAGCTCAGGGTGGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SALMGEHTHDNFLMESYLPARTR*SSGWRR Trigger: TCTTCTCCACCCTGAGCTCCAGCGAGTACGAGCAGG...CAGGTAGCTCTCCATAAGGAAATTATCATGAGTGTGTTCTCCCATCAGTGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | ACAGAGCACAAGCTAAGCTCATTGAAAGGCCGGGTCTCTAAGGCGTaGTGCAGCAGAAGGCAGGCTGTGCTAATATATCTAGCACATACA | + |
|
Preference number: 2 (lower is better) Translates to: TEHKLSSLKGRVSKA*CSRRQAVLIYLAHT Trigger: TGTATGTGCTAGATATATTAGCACAGCCTGCCTTCTGCTGCACAACGCCTTAGAGACCCGGCCTTTCAATGAGCTTAGCTTGTGCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | CGCGTAGGCATCGGGAATGTTCAAGACTTCGCCTGTTCTTGCCACTaGACCAGCAATCCCTTTCTCAATGGAAAATCTGATCTCCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RVGIGNVQDFACSCH*TSNPFLNGKSDLLG Trigger: ACCAAGGAGATCAGATTTTCCATTGAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGCGAAGTCTTGAACATTCCCGATGCCTACGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAAAAACAGTCCGTCATAGGTTTCCCAATGCCAGGGTCCTTTTATACGCTTGGGTCACCTGTGGACTGTaGCCTTCATTACATGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: AKTVRHRFPNARVLLYAWVTCGL*PSLHVS Trigger: GGACACATGTAATGAAGGTCACAGTCCACAGGTGAC...CCAAGCGTATAAAAGGACCCTGGCATTGGGAAACCTATGACGGACTGTTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTCCTGTGTCCCCTGGATaGGGGCAGAGGTATGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: MPYFYFLCIKGLAQLPKAPVSPG*GQRYAS Trigger: GGAAGCATACCTCTGCCCTCATCCAGGGGACACAGG...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCTGTGGAGAAAGCTTTCTTTGACATGGTTTaGAGTGAGAGCTTCAGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: WVWMAADLFCYCVPVEKAFFDMV*SESFSS Trigger: GGAACTGAAGCTCTCACTTCAAACCATGTCAAAGAA...AGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | TCGAGTCAGCCTGACACTTTGCAACAGGGGGAGTCTGTGACTGATGGAGAGTCATATCTAGCACATACATaGACACACTTGGAAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSQPDTLQQGESVTDGESYLAHT*THLEEQ Trigger: CTGCTCTTCCAAGTGTGTTCATGTATGTGCTAGATA...TGACTCTCCATCAGTCACAGACTCCCCCTGTTGCAAAGTGTCAGGCTGACTCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGTCCTCTCCTGTGGTCTCTaGCCCCTCCAGACAGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GQIQGDFCKIPTSTAKTVLSCGL*PLQTVQ Trigger: CTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAG...GACTGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCTCTCCTGTGGTCTCTaGCCCCTCCAGACAGTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGLSCGL*PLQTVQ Trigger: CTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAG...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGGAACACGGCAGAGCCTaGGTTGCTCACTGTCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGEHGRA*VAHCPR Trigger: CCTCGGACAGTGAGCAACCCAGGCTCTGCCGTGTTC...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTGAACACGGCAGAGCCTaGGTTGCTCACTGTCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: MPYFYFLCIKGLAQLPKAEHGRA*VAHCPR Trigger: CCTCGGACAGTGAGCAACCCAGGCTCTGCCGTGTTC...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGCAAGAACCTCTCCTGTaGTCTCTGCCCCCTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LLFSLYKGIGAVAEGYSEQEPLL*SLPPPD Trigger: GTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTG...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGCAAGAACCTCTCCTGTaGTCTCTGCCCCCTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVQEPLL*SLPPPD Trigger: GTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTG...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACCAAGAACCTCTCCTGTaGTCTCTGCCCCCTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHQEPLL*SLPPPD Trigger: GTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTG...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCCTGGCCACACCCTCATaGGAGGATGCAGGCAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KEHTCSAPVINSLDFSVTLATPS*EDAGKN Trigger: GTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAG...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTCCCATACAGAACCAGGGAACTaGCCACACCCTCATGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LTYKKVTCKLHNKGRVSHTEPGN*PHPHGR Trigger: CCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGT...ATGGGACACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCATGCTTCCTTCTGAGTaGAGCAGACTCACCTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: KVSSPAPARVLSECFWSVMLPSE*SRLTYV Trigger: CACATAGGTGAGTCTGCTCCACTCAGAAGGAAGCAT...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGTACCCTGTGTCCCCTaGATGAGGGCAGAGGTATGC | + |
|
Preference number: 2 (lower is better) Translates to: LLFSLYKGIGAVAEGYSEVPCVP*MRAEVC Trigger: GCATACCTCTGCCCTCATCCAGGGGACACAGGGTAC...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 90 bp | AAGAGGAGAGCCACACTAAACAGGTCACATCAAACTGCCTATTTTTaGCCATTATGGGAGAATATCTCAGCGATCCGTCGGGCCAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: KRRATLNRSHQTAYF*PLWENISAIRRAST Trigger: AGTGCTGGCCCGACGGATCGCTGAGATATTCTCCCATAATGGCAAAAAATAGGCAGTTTGATGTGACCTGTTTAGTGTGGCTCTCCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTGTGACCCTGACTTCCTCTTaGGACACACACTATATTCAG | + |
|
Preference number: 2 (lower is better) Translates to: CENRIAMQVEAVADSLCVTLTSS*DTHYIQ Trigger: CTGAATATAGTGTGTGTCTCAAGAGGAAGTCAGGGT...CACACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCCATCATAGGAATGGGCTGTATGCCCAGCTTCTTCATCTCATCACCCTCAGCTACATCTCCTCCAACTaGTTCCTGTTCCCAAAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: VHHRNGLYAQLLHLITLSYISSN*FLFPKY Trigger: ATACTTTGGGAACAGGAAGCAGTTGGAGGAGATGTA...GCTGAGGGTGATGAGATGAAGAAGCTGGGCATACAGCCCATTCCTATGATGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCAAGAACCTCTCCTGTaGTCTCTGCCCCCTCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGQEPLL*SLPPPD Trigger: GTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTG...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGCACCAAGCAGCAGCATaGCACAGAACCAGGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: LLFSLYKGIGAVAEGYSEHQAAA*HRTREL Trigger: CAGTTCCCTGGTTCTGTGCCATGCTGCTGCTTGGTG...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGCCTGTAGATGCATTCTaGGTGGCGGATCCTGTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLFSLYKGIGAVAEGYSEPVDAF*VADPVV Trigger: TACCACAGGATCCGCCACTCAGAATGCATCTACAGG...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCCCTGCAATTCAGATTCCAAGATGATAGAAGATCAATTTGTGTGGATCGATGCAGTGTGCCACCGTaGCTGCATGCTTCCAGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: SSLQFRFQDDRRSICVDRCSVPP*LHASSC Trigger: ACAACTGGAAGCATGCAGTCACGGTGGCACACTGCA...TCGATCCACACAAATTGATCTTCTATCATCTTGGAATCTGAATTGCAGGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | ACGTGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTAGGCCATTGTTGTTTTaGAGTATGGCATACATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TCENRIAMQVEAVADSLCRPLLF*SMAYMQ Trigger: CTGCATGTATGCCATACTTCAAAACAACAATGGCCT...ACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGAGAACAACCGAACCGGGATTCTCTGGTCTCCATGCTATCCTGAAAATCCCCCCCACAAGATTTGCTTaGTGGAGGAAATTTATATGC | + |
|
Preference number: 2 (lower is better) Translates to: VRTTEPGFSGLHAILKIPPTRFA*WRKFIC Trigger: GCATATAAATTTCCTCCAGCAAGCAAATCTTGTGGG...GGGGATTTTCAGGATAGCATGGAGACCAGAGAATCCCGGTTCGGTTGTTCTCAC 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGGGCAGAAGGCCTCTTTaGCCCAGTGCCTGTACAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGGRRPL*PSACTV Trigger: AACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCC...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCAGTGCAGTGCTGGCCTaGGAGCAAATAGCATTCGGA | + |
|
Preference number: 2 (lower is better) Translates to: KEHTCSAPVINSLDFSVTSAVLA*EQIAFG Trigger: TCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACACACCAAGCAGCAGCATaGCACAGAACCAGGGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTHQAAA*HRTREL Trigger: CAGTTCCCTGGTTCTGTGCCATGCTGCTGCTTGGTG...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACATGCCAGAGTGCTGAGTaGGTGTTTCTGGTCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTCQSAE*VFLVSL Trigger: GAGACTGACCAGAAACACTCACTCAGCACTCTGGCA...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGTCCAGGGGAGGAGATGGTaGCATTTTAGAAGCCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: GQIQGDFCKIPTSTAKTVQGRRW*HFRSPW Trigger: CCATGGGCTTCTAAAATGTCACCATCTCCTCCCCTG...GACTGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACACAGGGGAGGAGATGGTaGCATTTTAGAAGCCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTQGRRW*HFRSPW Trigger: CCATGGGCTTCTAAAATGTCACCATCTCCTCCCCTG...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | TTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTCCCATAAAGAACAGACTGGATaGGGGTTCCTGATTCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LTYKKVTCKLHNKGRVSHKEQTG*GFLIPG Trigger: GCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTT...ATGGGACACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | ACGTGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTCTCAGCCCAGAATTCTaGATATATATCATTCGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TCENRIAMQVEAVADSLCLSPEF*IYIIRC Trigger: ACAGCGAATGATATATATGCAGAATTCTGGGCTGAG...ACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTAGTGCAGTGCTGGCCTaGGAGCAAATAGCATTCGGA | + |
|
Preference number: 2 (lower is better) Translates to: MPYFYFLCIKGLAQLPKASAVLA*EQIAFG Trigger: TCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGATTTATTTCACATTAGAGATAAAACGGGCAAATGTATATATAGTACCTGGGGTCACTCTTCAGGCTaGAGGGAGCTGGGGACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GDLFHIRDKTGKCIYSTWGHSSG*RELGTG Trigger: TCCTGTCCCCAGCTCCCTCCAGCCTGAAGAGTGACC...CCAGGTACTATATATACATTTGCCCGTTTTATCTCTAATGTGAAATAAATCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTGCACTGATGGGAGAACACACTCATGATAATTTCCTTATGGAGAGCTACCTGAAGCAAAGAACAGACTaGATGCGGGTTCCTGATTCC | + |
|
Preference number: 2 (lower is better) Translates to: SALMGEHTHDNFLMESYLKQRTD*MRVPDS Trigger: GGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTT...CAGGTAGCTCTCCATAAGGAAATTATCATGAGTGTGTTCTCCCATCAGTGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGTCTTACTGAAGCCCCTGTaGTCCAGGTCATGGCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: GQIQGDFCKIPTSTAKTVLLKPL*SRSWHR Trigger: TCTGTGCCATGACCTGGACCACAGGGGCTTCAGTAA...GACTGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCACACAAAGCAAATGCAGGGTAGGAATATACAGAGAAGAGACTTTCAAAACCCGCTGGAGCTCAGGGTaGAGAAGATATTGTGCCCTT | + |
|
Preference number: 2 (lower is better) Translates to: TTQSKCRVGIYREETFKTRWSSG*RRYCAL Trigger: AAGGGCACAATATCTTCTCCACCCTGAGCTCCAGCG...GGTTTTGAAAGTCTCTTCTCTGTATATTCCTACCCTGCATTTGCTTTGTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGTCACAGTGCAAGGCCAGTaGGCAGAAGACAGCAAACAT | + |
|
Preference number: 2 (lower is better) Translates to: GQIQGDFCKIPTSTAKTVTVQGQ*AEDSKH Trigger: ATGTTTGCTGTCTTCTGCGCACTGGCCTTGCACTGT...GACTGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGAACAACCGAACCGGGATTCTCTGGTCTCCATGCTATCCTGAAAATCCCCACAAGATTTGCTTGCTaGAGGAAATTTATATGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: VRTTEPGFSGLHAILKIPTRFAC*RKFICL Trigger: AAGGCATATAAATTTCCTCCAGCAAGCAAATCTTGT...GGGGATTTTCAGGATAGCATGGAGACCAGAGAATCCCGGTTCGGTTGTTCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | ACGTGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTCTGTGTGTATGGTATTaGGTGTATCAAAATCTATCC | + |
|
Preference number: 2 (lower is better) Translates to: TCENRIAMQVEAVADSLCLCVWY*VYQNLS Trigger: GGATAGATTTTGATACACCCAATACCATACACACAG...ACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | CAATGCCAGGGTCCTTTTATACGCTTGGTGACAGAATCCATGCGCTCATGCCTTGAAGATCAATTTGTGTaGATCGAATGGCTTTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: QCQGPFIRLVTESMRSCLEDQFV*IEWLFA Trigger: AGCAAAAAGCCATTCGATCCACACAAATTGATCTTC...AAGGCATGAGCGCATGGATTCTGTCACCAAGCGTATAAAAGGACCCTGGCATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTCCCATAAGCCCAAGCAAGATTaGCTGTTGCAACCTCCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LTYKKVTCKLHNKGRVSHKPKQD*LLQPPD Trigger: ATCAGGAGGTTGCAACAGCCAATCTTGCTTGGGCTT...ATGGGACACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | ATCATTTATAGTCACTGTTCTAGATACAGCAGAAGACCGGGGGATCGGGGTGACCCAATCCTGCCTGTGTaGATTCTAAAACCAAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: IIYSHCSRYSRRPGDRGDPILPV*ILKPNY Trigger: ATAATTTGGTTTTAGAATTCACACAGGCAGGATTGG...GTCACCCCGATCCCCCGGTCTTCTGCTGTATCTAGAACAGTGACTATAAATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | GATCAATACTTCACACTGGTATTGGCACTTACATATCCAAGAACATTTTCTCAGGTTCCTCTGCAAAACTaGCCCAGGCAGGGCAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: DQYFTLVLALTYPRTFSQVPLQN*PRQGKF Trigger: GAATTTGCCCTGCCTGGGGCAGTTTTGCAGAGGAAC...CTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGGATTTATTTCACATTAGAGATAAAACGGGCAAATGTATATATAGTACCTGGGTCTCTAAGGCGTTGTaGAGCAGAAGGCAGGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GDLFHIRDKTGKCIYSTWVSKAL*SRRQAV Trigger: CACAGCCTGCCTTCTGCTGCACAACGCCTTAGAGAC...CCAGGTACTATATATACATTTGCCCGTTTTATCTCTAATGTGAAATAAATCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATTGCTGAGTGAGTGTTTCTaGTCAGTCTCTTCCTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GRKLNRLCKCQAPVCMVLLSECF*SVSSFS Trigger: TGAGAAGGAAGAGACTGACCAGAAACACTCACTCAG...CAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGTCCCTTTTCTCTCCTTTTaGGGTGTGTGTGTGTGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: GQIQGDFCKIPTSTAKTVPFLSF*GVCVCV Trigger: CACACACACACACACACCCCAAAAGGAGAGAAAAGG...GACTGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 90 bp | GATTTGCTTGCTGGAGGAAATTTATATGCCTTACTTTTATTTTCTTaGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: DLLAGGNLYALLLFS*YKGIGAVAEGYSEG Trigger: CCCCTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCATATAAATTTCCTCCAGCAAGCAAATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 90 bp | TCTGCATATATATCATTCGCTGTCAATTTTGTAACTGGCCATAGTTaGGTCACAGAGCAAAGATCACAGGCAGTCATCATCAAGCCGATG | + |
|
Preference number: 2 (lower is better) Translates to: SAYISFAVNFVTGHS*VTEQRSQAVIIKPM Trigger: CATCGGCTTGATGATGACTGCCTGTGATCTTTGCTCTGTGACCAAACTATGGCCAGTTACAAAATTGACAGCGAATGATATATATGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | GATCAATACTTCACACTGGTATTGGCACTTACATATCCAAGAACATTTTCTCAGAGGTATGCTTCCTTCTaGGTGGAGCAGACTCACCTA | + |
|
Preference number: 2 (lower is better) Translates to: DQYFTLVLALTYPRTFSQRYASF*VEQTHL Trigger: TAGGTGAGTCTGCTCCACTCAGAAGGAAGCATACCT...CTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCACTGATGGGAGAACACACTCATGATAATTTCCTTATGGAGAGCTACCTGAATAGACTTTGCAAATaGCAAGCTCCTGTGTGTATG | + |
|
Preference number: 2 (lower is better) Translates to: SALMGEHTHDNFLMESYLNRLCK*QAPVCM Trigger: CATACACACAGGAGCTTGGCATTTGCAAAGTCTATT...CAGGTAGCTCTCCATAAGGAAATTATCATGAGTGTGTTCTCCCATCAGTGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGAGGCAGGATTCCCATaGCTGTATGTTAAATATGCT | + |
|
Preference number: 2 (lower is better) Translates to: LLFSLYKGIGAVAEGYSEEAGFP*LYVKYA Trigger: AGCATATTTAACATACAGGCATGGGAATCCTGCCTC...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGCACTGATGGGAGAACACACTCATGATAATTTCCTTATGGAGAGCTACCTGACCACACAAAGCAAATaGAGGGTAGGAATATACAGA | + |
|
Preference number: 2 (lower is better) Translates to: SALMGEHTHDNFLMESYLTTQSK*RVGIYR Trigger: TCTGTATATTCCTACCCTGCATTTGCTTTGTGTGGT...CAGGTAGCTCTCCATAAGGAAATTATCATGAGTGTGTTCTCCCATCAGTGCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | GATCAATACTTCACACTGGTATTGGCACTTACATATCCAAGAACATTTTCTCAGAGCAAGATTGGCTGTTaGAACCTCCTGATGGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DQYFTLVLALTYPRTFSQSKIGC*NLLMAE Trigger: CTCAGCCATCAGGAGGTTGCAACAGCCAATCTTGCT...CTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGGATTTATTTCACATTAGAGATAAAACGGGCAAATGTATATATAGTACCTGGGTCACCTGTGGACTGTaGCCTTCATTACATGTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: GDLFHIRDKTGKCIYSTWVTCGL*PSLHVS Trigger: GGACACATGTAATGAAGGTCACAGTCCACAGGTGAC...CCAGGTACTATATATACATTTGCCCGTTTTATCTCTAATGTGAAATAAATCCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGATAGCTTCTCTTGTTaGCATCACCTTGTAACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTDSFSC*HHLVTS Trigger: ACTGGTTACAAGGTGATGTCAACAAGAGAAGCTATC...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAATACATGAACACACTTaGAAGAGCAGAGTTCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTIHEHT*KSRVHW Trigger: CCAGTGAACTCTGCTCTTCCAAGTGTGTTCATGTAT...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCCCTGCAATTCAGATTCCAAGATGATAGAAGATCAATTTGTGTGGATCGAAATAGACTTTGCAAATaGCAAGCTCCTGTGTGTATG | + |
|
Preference number: 2 (lower is better) Translates to: SSLQFRFQDDRRSICVDRNRLCK*QAPVCM Trigger: CATACACACAGGAGCTTGGCATTTGCAAAGTCTATT...TCGATCCACACAAATTGATCTTCTATCATCTTGGAATCTGAATTGCAGGGAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR GCA 90 bp | GATCAATACTTCACACTGGTATTGGCACTTACATATCCAAGAACATTTTCTCAGGAGGCAGGATTCCCATaGCTGTATGTTAAATATGCT | + |
|
Preference number: 2 (lower is better) Translates to: DQYFTLVLALTYPRTFSQEAGFP*LYVKYA Trigger: AGCATATTTAACATACAGGCATGGGAATCCTGCCTC...CTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | TTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTCCCATCAAGTAGAGAGTCTATaGCAACTATGTTATCAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LTYKKVTCKLHNKGRVSHQVESL*QLCYQS Trigger: ACTTTGATAACATAGTTGCCATAGACTCTCTACTTG...ATGGGACACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAATTCAATACAGCATTTaGCATTCCTTATGGATGTCT | + |
|
Preference number: 2 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTIQYSI*HSLWMS Trigger: AGACATCCATAAGGAATGCCAAATGCTGTATTGAAT...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CCA 90 bp | CACACAAAGCAAATGCAGGGTAGGAATATACAGAGAAGAGACTTTCAAAACCAAACAAGATTTGCTTGCTaGAGGAAATTTATATGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: HTKQMQGRNIQRRDFQNQTRFAC*RKFICL Trigger: AAGGCATATAAATTTCCTCCAGCAAGCAAATCTTGT...TTGGTTTTGAAAGTCTCTTCTCTGTATATTCCTACCCTGCATTTGCTTTGTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CAA 90 bp | AAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATaGGGTGTATCAAAATCTATCCCAAAGATTCATCTTAAAGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: KLNRLCKCQAPVCMV*GVSKSIPKIHLKVS Trigger: AGATACTTTAAGATGAATCTTTGGGATAGATTTTGATACACCCAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | GCCCTGCACCTCCTCCTGTCCTGCCTGATTGCACCGTaGGGAGACGGATCAGAACCCTGGGAGACGGACGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALHLLLSCLIAP*GDGSEPWETDA Trigger: GGCGTCCGTCTCCCAGGGTTCTGATCCGTCTCCTCACGGTGCAATCAGGCAGGACAGGAGGAGGTGCAGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | TCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTCTaGACACGGCAGAGCCTGGGTTGCTCACTGTCCGAG | + |
|
Preference number: 3 (lower is better) Translates to: SEVRWSHGVADV*TRQSLGCSLSE Trigger: CTCGGACAGTGAGCAACCCAGGCTCTGCCGTGTTCAGACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 72 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTaGCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WEDAGKNLSCGL*PLQTVQCWPGS Trigger: GCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | TGGACACCGTCTGGGAGAAGTGGTGTTGCTCCATGGTaGAGGTGGAGTACAGCGCCGCCAGGGGGTGGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: WTPSGRSGVAPW*RWSTAPPGGGR Trigger: TCGACCACCCCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGCAACACCACTTCTCCCAGACGGTGTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | GGATGGACACCGTCTGGGAGAAGTGGTGTTGCTCCATaGTGGAGGTGGAGTACAGCGCCGCCAGGGGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GWTPSGRSGVAP*WRWSTAPPGGG Trigger: ACCACCCCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGCAACACCACTTCTCCCAGACGGTGTCCATCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | AGTTGCTGGGACCTGTGCCCCTGCTCCAGCAGGTGTTaGCCAGCAAGGAGGTTGTCCCTATGGCCTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SCWDLCPCSSRC*PARRLSLWPLR Trigger: CCTCAGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCACAGGTCCCAGCAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | CCGTCTGGGAGAAGTGGTGTTGCTCCATGGTGGAGGTaGAGTACAGCGCCGCCAGGGGGTGGTCGAACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PSGRSGVAPWWR*STAPPGGGRTS Trigger: AGAAGTTCGACCACCCCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGCAACACCACTTCTCCCAGACGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | CAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATaGAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QNQGTGHTLMGG*RQEPLLWSLPP Trigger: AGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 72 bp | TGTGGTAGCCCTGCACCTCCTCCTGTCCTGCCTGATTaGACCGTGAGGAGACGGATCAGAACCCTGGGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: CGSPAPPPVLPD*TVRRRIRTLGD Trigger: GTCTCCCAGGGTTCTGATCCGTCTCCTCACGGTGCAATCAGGCAGGACAGGAGGAGGTGCAGGGCTACCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 72 bp | AGGCTTTGGCTGCAGACCCATCCACTGAGGATCAGTTaGTGGGACCTGTGCCCCTGCTCCAGCAGGTGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLWLQTHPLRIS*WDLCPCSSRCW Trigger: CCAACACCTGCTGGAGCAGGGGCACAGGTCCCAGCAACTGATCCTCAGTGGATGGGTCTGCAGCCAAAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | TGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCCTaGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WSLPPPDSAVLA*EQIAFGGQVEP Trigger: TGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | TCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATaGCCTCTGAGGTGTCTTGGCTGGGTGTGGATGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SSRCWPARRLSL*PLRCLGWVWMA Trigger: CGCCATCCACACCCAGCCAAGACACCTCAGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | CTTTGGCTGCAGACCCATCCACTGAGGATCAGTTGCTaGGACCTGTGCCCCTGCTCCAGCAGGTGTTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LWLQTHPLRISC*DLCPCSSRCWP Trigger: TGGCCAACACCTGCTGGAGCAGGGGCACAGGTCCCAGCAACTGATCCTCAGTGGATGGGTCTGCAGCCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGGCAGAAGGCCTCTTaGCCCCAGTGCCTGTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRRQKAS*PQCLYS Trigger: ACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCCT...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | CTCAGGTGTGCTCTTGCTAGGCGCCGGGCCTGGGCCTaGAATCCACATTGCTGTCTCTTCCCCGCGAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: LRCALARRRAWA*NPHCCLFPANY Trigger: GTAATTCGCGGGGAAGAGACAGCAATGTGGATTTCAGGCCCAGGCCCGGCGCCTAGCAAGAGCACACCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | ACGGCAGAGCCTGGGTTGCTCACTGTCCGAGGTGTGTaGGGCAAGCAGGGAGTCGTCTGCTTCACATGGATA | + |
|
Preference number: 3 (lower is better) Translates to: TAEPGLLTVRGV*GKQGVVCFTWI Trigger: TATCCATGTGAAGCAGACGACTCCCTGCTTGCCGCACACACCTCGGACAGTGAGCAACCCAGGCTCTGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 72 bp | AGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTaGAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RTSPVVSAPSRQ*SAGLGANSIRR Trigger: CCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | GCATGGCACAGAACCAGGGAACTGGCCACACCCTCATaGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: AWHRTRELATPS*EDAGKNLSCGL Trigger: GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | GGGCCAGCACTGGTCACTCTTCAGGCTGGAGGGAGCTaGGGACAGGATTCAATTGCTCTCTTCTTGGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GPALVTLQAGGS*GQDSIALFLAR Trigger: CCTTGCCAAGAAGAGAGCAATTGAATCCTGTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGTGCTGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | ATGTCAAACAGGTCCGAGTACAGCTCCTTGTTCTTGTaGTCCACCTGGAAGAGCGCGCAGCGGTCGGCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: MSNRSEYSSLFL*STWKSAQRSAF Trigger: GAACGCCGACCGCTGCGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGACCTGTTTGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | CAGGCAGTCATCATCAAGCCGATGACACGGTCTCGATaGGACTGGTTGTGGAGGTTCAGCGACCCTGTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: QAVIIKPMTRSR*DWLWRFSDPVW Trigger: CCAGACAGGGTCGCTGAACCTCCACAACCAGTCCCATCGAGACCGTGTCATCGGCTTGATGATGACTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCGATCCGTCGGGCCAGCACTGGTCACTCTTCAGGCTGGAGGGAGCTGGGGACGAGGCCATTGTTGTTTaGAAGTATGGCATACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SDPSGQHWSLFRLEGAGDEAIVV*KYGIHA Trigger: TGCATGTATGCCATACTTCAAAACAACAATGGCCTC...GTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGTGCTGGCCCGACGGATCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | TTGGAGAAGGCGCTACCGCTGATCTTGTTCACCATCTaGACCACGCCAATCACGCTGCCTCGGCTCACTATG | + |
|
Preference number: 3 (lower is better) Translates to: LEKALPLILFTI*TTPITLPRLTM Trigger: CATAGTGAGCCGAGGCAGCGTGATTGGCGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGCCTTCTCCAA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | CCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTaGAGCAGACTCACCTATGTGCCCCCAGATAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: PLDEGRGMLPSE*SRLTYVPPDRL Trigger: CAGTCTATCTGGGGGCACATAGGTGAGTCTGCTCCACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | AGGAGGTTGTCCCTATGGCCTCTGAGGTGTCTTGGCTaGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: RRLSLWPLRCLG*VWMAADLFCYC Trigger: ACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGGCCATAGGGACAACCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | AGCAAGGAGGTTGTCCCTATGGCCTCTGAGGTGTCTTaGCTGGGTGTGGATGGCGGCGGACCTCTTTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SKEVVPMASEVS*LGVDGGGPLLL Trigger: TAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGGCCATAGGGACAACCTCCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | AGGTCCGAGTACAGCTCCTTGTTCTTGTGGTCCACCTaGAAGAGCGCGCAGCGGTCGGCGTTCACTAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: RSEYSSLFLWST*KSAQRSAFTRF Trigger: AAATCTAGTGAACGCCGACCGCTGCGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | TCTGCACCACGCCAATCACGCTGCCTCGGCTCACTATaGGCATACACAGAATGTTCCTCGTGGTGTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: SAPRQSRCLGSL*AYTECSSWCSL Trigger: CAGGCTACACCACGAGGAACATTCTGTGTATGCCCATAGTGAGCCGAGGCAGCGTGATTGGCGTGGTGCAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | TCTCCAGCACCTGCTCGTACTCGCTGGAGCTCAGGGTaGAGAAGATATTGTGCCCTTCCAGCTGAAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SPAPARTRWSSG*RRYCALPAEGW Trigger: CCATCCTTCAGCTGGAAGGGCACAATATCTTCTCCACCCTGAGCTCCAGCGAGTACGAGCAGGTGCTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | AAACCAAAGGCAGCCGGGAACCAGAACCCAACAGATTaGTGCCTCCACCTGGAGCCACCGTTCCCTACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: KPKAAGNQNPTD*CLHLEPPFPTN Trigger: GTTTGTAGGGAACGGTGGCTCCAGGTGGAGGCATCAATCTGTTGGGTTCTGGTTCCCGGCTGCCTTTGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | GATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATaGTTCCTTCTGAGTGGAGCAGACTCACCTATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: DVPCVPWMRAEV*FLLSGADSPMC Trigger: GCACATAGGTGAGTCTGCTCCACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | TTGTCCCTATGGCCTCTGAGGTGTCTTGGCTGGGTGTaGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSLWPLRCLGWV*MAADLFCYCVP Trigger: AGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGGCCATAGGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | GTCATCATCAAGCCGATGACACGGTCTCGATGGGACTaGTTGTGGAGGTTCAGCGACCCTGTCTGGTACATC | + |
|
Preference number: 3 (lower is better) Translates to: VIIKPMTRSRWD*LWRFSDPVWYI Trigger: GATGTACCAGACAGGGTCGCTGAACCTCCACAACCAGTCCCATCGAGACCGTGTCATCGGCTTGATGATGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | GTGGGAGGATCTGCGTCAAGGTGGTATAGCAGGGAATaGCCACAGCATTGTAGAATCCGAGCTGCCCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VGGSASRWYSRE*PQHCRIRAALE Trigger: CTCAAGGGCAGCTCGGATTCTACAATGCTGTGGCCATTCCCTGCTATACCACCTTGACGCAGATCCTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | GCAGAGGCTCTGTGGGTGGGAGGATCTGCGTCAAGGTaGTATAGCAGGGAATGGCCACAGCATTGTAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: AEALWVGGSASR*YSREWPQHCRI Trigger: GATTCTACAATGCTGTGGCCATTCCCTGCTATACCACCTTGACGCAGATCCTCCCACCCACAGAGCCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTGCCTGTTCTTGCCACTaGACCAGCAATCCCTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSACSCH*TSNPFL Trigger: GAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGC...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | CGAGTCAGCCTGACACTTTGCAACAGGGGGAGTCTGTaGCTGATGGAGAGTCATCCAAGAATCCTACTGCGC | + |
|
Preference number: 3 (lower is better) Translates to: RVSLTLCNRGSL*LMESHPRILLR Trigger: GCGCAGTAGGATTCTTGGATGACTCTCCATCAGTCACAGACTCCCCCTGTTGCAAAGTGTCAGGCTGACTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | AGTTGTTCTCGTCTGTCTTGGAGAAGGCGCTACCGCTaGTCTTGTTCACCATCTGCACCACGCCAATCACGC | + |
|
Preference number: 3 (lower is better) Translates to: SCSRLSWRRRYR*SCSPSAPRQSR Trigger: GCGTGATTGGCGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGCCTTCTCCAAGACAGACGAGAACAACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | ATTGCTGTCTCTTCCCCGCGAATTACCTTCTCCCACTaGTTGAGGTTATCCCTGCAGGCCTTCAGCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: IAVSSPRITFSH*LRLSLQAFSRG Trigger: GCCTCTGCTGAAGGCCTGCAGGGATAACCTCAATCAGTGGGAGAAGGTAATTCGCGGGGAAGAGACAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | CCAATGGCAGTGACAATGGGCAAGCAAAGAACAGACTaGATGCGGGTTCCTGATTCCAGGCCAGTACCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: PMAVTMGKQRTD*MRVPDSRPVPR Trigger: TCGAGGTACTGGCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTTGCCCATTGTCACTGCCATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | TCGGTCTGTTTGGCGAGACCTCTACACACCTGCACCTaGTGTATTGCTACGGAAGCCCAAGCAAGATTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SVCLARPLHTCT*CIATEAQARLA Trigger: AGCCAATCTTGCTTGGGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAGAGGTCTCGCCAAACAGACCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | CCAGGCCACATGTTCTCGAAAGGACCAATGTCAAAGTaGAATAGCTCGATGTCCCGGCAGATGCGTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PGHMFSKGPMSK*NSSMSRQMRAG Trigger: ACCAGCACGCATCTGCCGGGACATCGAGCTATTCCACTTTGACATTGGTCCTTTCGAGAACATGTGGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | TCGAGTCAGCCTGACACTTTGCAACAGGGGGAGTCTGTGACTGATGGAGAGTCAGGATCGAATGGCTTTTaGCTGCAGCCAGTGTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: SSQPDTLQQGESVTDGESGSNGF*LQPVSP Trigger: AGGTGACACTGGCTGCAGCAAAAAGCCATTCGATCC...TGACTCTCCATCAGTCACAGACTCCCCCTGTTGCAAAGTGTCAGGCTGACTCGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | AATGGGCAAGCAAAGAACAGACTGGATGCGGGTTCCTaGTTCCAGGCCAGTACCTCGAGGAAATCGCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: NGQAKNRLDAGS*FQASTSRKSLI Trigger: GATGAGCGATTTCCTCGAGGTACTGGCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTTGCCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | CAGAGCAAAGATCACAGGCAGTCATCATCAAGCCGATaGCACGGTCTCGATGGGACTGGTTGTGGAGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSKDHRQSSSSR*HGLDGTGCGGS Trigger: TGAACCTCCACAACCAGTCCCATCGAGACCGTGTCATCGGCTTGATGATGACTGCCTGTGATCTTTGCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | GTGTATTGCTACGGAAGCCCAAGCAAGATTGGCTGTTaGAACCTCCTGATGGCTGAGGCAGAAGGCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VYCYGSPSKIGC*NLLMAEAEGLF Trigger: AAAGAGGCCTTCTGCCTCAGCCATCAGGAGGTTGCAACAGCCAATCTTGCTTGGGCTTCCGTAGCAATACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | TTTGGCGAGACCTCTACACACCTGCACCTGGTGTATTaGTACGGAAGCCCAAGCAAGATTGGCTGTTGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: FGETSTHLHLVY*YGSPSKIGCCN Trigger: GTTGCAACAGCCAATCTTGCTTGGGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAGAGGTCTCGCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | GGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCTGTaGAGAAAGCTGCTCTCCTTGGAAAGAATCCAGACG | + |
|
Preference number: 3 (lower is better) Translates to: GWRRTSFVTVFL*RKLLSLERIQT Trigger: CGTCTGGATTCTTTCCAAGGAGAGCAGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCAGGTGTGCTCTTGCTAGGCGCCGGGCCTGGGCCTGAAATCCACATTGCTAAGACAGCAAACATCTaGAAGTTGTTCTCGTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: FSGVLLLGAGPGPEIHIAKTANI*KLFSSV Trigger: GACAGACGAGAACAACTTCAAGATGTTTGCTGTCTT...AGCAATGTGGATTTCAGGCCCAGGCCCGGCGCCTAGCAAGAGCACACCTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGGGTGGGAGGATCTGCGTCAAGGTGGTATAGCAGGGAATGGCCACAGCATCCTGTAATCAACAGTTaGGATTTCTCTGTCACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LWVGGSASRWYSREWPQHPVINS*DFSVTC Trigger: ACAGGTGACAGAGAAATCCAAACTGTTGATTACAGG...ATGCTGTGGCCATTCCCTGCTATACCACCTTGACGCAGATCCTCCCACCCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | TCGAGTCAGCCTGACACTTTGCAACAGGGGGAGTCTGTGACTGATGGAGAGTCATCCTTTTCTCTCCTTTaGGGGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSQPDTLQQGESVTDGESSFSLL*GCVCVC Trigger: ACACACACACACACACCCCAAAAGGAGAGAAAAGGA...TGACTCTCCATCAGTCACAGACTCCCCCTGTTGCAAAGTGTCAGGCTGACTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | TCTGGTCTCCATGCTATCCTGAAAATCCCCACGGTGTaGACCTGTGACTTCCTTAGGAGTTCCCAGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SGLHAILKIPTV*TCDFLRSSQER Trigger: CCTTTCCTGGGAACTCCTAAGGAAGTCACAGGTTCACACCGTGGGGATTTTCAGGATAGCATGGAGACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | CAACCGAACCGGGATTCTCTGGTCTCCATGCTATCCTaGAAATCCCCACGGTGTGAACCTGTGACTTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: QPNRDSLVSMLS*KSPRCEPVTSL Trigger: TAAGGAAGTCACAGGTTCACACCGTGGGGATTTTCAGGATAGCATGGAGACCAGAGAATCCCGGTTCGGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | AGTGCAAGGCCAGTGCGCAGAAGACAGCAAACATCTTaGAGTTGTTCTCGTCTGTCTTGGAGAAGGCGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: SARPVRRRQQTS*SCSRLSWRRRY Trigger: GTAGCGCCTTCTCCAAGACAGACGAGAACAACTTCAAGATGTTTGCTGTCTTCTGCGCACTGGCCTTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | TGTTTTGAAGTATGGCATACATGCAGTGTGCCACCGTaGCTGCATGCTTCCAGTTGTGGTAAGGAACCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: CFEVWHTCSVPP*LHASSCGKEPA Trigger: GGCGGGTTCCTTACCACAACTGGAAGCATGCAGTCACGGTGGCACACTGCATGTATGCCATACTTCAAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | TTGAAGTATGGCATACATGCAGTGTGCCACCGTGACTaGATGCTTCCAGTTGTGGTAAGGAACCCGCCGATA | + |
|
Preference number: 3 (lower is better) Translates to: LKYGIHAVCHRD*MLPVVVRNPPI Trigger: TATCGGCGGGTTCCTTACCACAACTGGAAGCATGCAGTCACGGTGGCACACTGCATGTATGCCATACTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTCCTGTAATCAACAGTTaGGATTTCTCTGTCACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSPVINS*DFSVTC Trigger: ACAGGTGACAGAGAAATCCAAACTGTTGATTACAGG...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAAACAGTCCGTCATAGGTTTCCCAATGCCAGGGTCCTTTTATACGCTTGGGGATCGAATGGCTTTTaGCTGCAGCCAGTGTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: AKTVRHRFPNARVLLYAWGSNGF*LQPVSP Trigger: AGGTGACACTGGCTGCAGCAAAAAGCCATTCGATCC...CCAAGCGTATAAAAGGACCCTGGCATTGGGAAACCTATGACGGACTGTTTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | TTGCGCTCGAGGTCTGTGAAGAGGCCATTGTTGTTTTaGAGTATGGCATACATGCAGTGTGCCACCGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: LRSRSVKRPLLF*SMAYMQCATVT Trigger: AGTCACGGTGGCACACTGCATGTATGCCATACTTCAAAACAACAATGGCCTCTTCACAGACCTCGAGCGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | CTAAGCTCATTGAAAGGCCGGGTCTCTAAGGCGTTGTaGAGCAGAAGGCAGGCTGTGCTAATATATCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LSSLKGRVSKAL*SRRQAVLIYLA Trigger: TGCTAGATATATTAGCACAGCCTGCCTTCTGCTGCACAACGCCTTAGAGACCCGGCCTTTCAATGAGCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | TTTCTTTCCCCTTCAAAAGAGAGCCCATTAAGGCTTTaGCTGCAGACCCATCCACTGAGGATCAGTTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FLSPSKESPLRL*LQTHPLRISCW Trigger: CCAGCAACTGATCCTCAGTGGATGGGTCTGCAGCCAAAGCCTTAATGGGCTCTCTTTTGAAGGGGAAAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTGACCACCACCAGCCCCCTGTGTGTATGGTATaGGGTGTATCAAAATCTATC | + |
|
Preference number: 3 (lower is better) Translates to: TGFNCSLLGKGKADHHQPPVCMV*GVSKSI Trigger: GATAGATTTTGATACACCCAATACCATACACACAGG...GGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | TCCGCTACAACCGTGGGTCAGAGTGTGGAAGGAAACTaGATAGACTTTGCAAATGCCAAGCTCCTGTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: SATTVGQSVEGN*IDFANAKLLCV Trigger: TACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACACTCTGACCCACGGTTGTAGCGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | AGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTaGCCACCACCAGCCCAGCATACTTTACTTTACACT | + |
|
Preference number: 3 (lower is better) Translates to: RIQLLSSWQGEG*PPPAQHTLLYT Trigger: AGTGTAAAGTAAAGTATGCTGGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | GACACGCAATTAGCAGGCCTTTGCGCTCGAGGTCTGTaGAGAGGCCATTGTTGTTTTGAAGTATGGCATACA | + |
|
Preference number: 3 (lower is better) Translates to: DTQLAGLCARGL*RGHCCFEVWHT Trigger: TGTATGCCATACTTCAAAACAACAATGGCCTCTTCACAGACCTCGAGCGCAAAGGCCTGCTAATTGCGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | GCCATTGTTGTTTTGAAGTATGGCATACATGCAGTGTaGCACCGTGACTGCATGCTTCCAGTTGTGGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AIVVLKYGIHAV*HRDCMLPVVVR Trigger: CCTTACCACAACTGGAAGCATGCAGTCACGGTGGCACACTGCATGTATGCCATACTTCAAAACAACAATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTGCCATTATGGGAGAATATCTCAGCGATCCGTCGGGCCAGCACTGGTCACCCACTACTGAGCACTTaGTCATTGCATGAAATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FLPLWENISAIRRASTGHPLLST*SLHEML Trigger: AAGCATTTCATGCAATGACAAAGTGCTCAGTAGTGG...GTGACCAGTGCTGGCCCGACGGATCGCTGAGATATTCTCCCATAATGGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGTCCTGGGAGAAGTGGTGTaGCTCCATGGTGGAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GQIQGDFCKIPTSTAKTVLGEVV*LHGGGG Trigger: TCCACCTCCACCATGGAGCAACACCACTTCTCCCAG...GACTGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATTGATCTCCTTGGTCTTCTaGAAGATGGGCTTCCCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GRKLNRLCKCQAPVCMVLISLVF*KMGFPS Trigger: GGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGAT...CAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | ATCATTTATAGTCACTGTTCTAGATACAGCAGAAGACCGGGGGATCGGGGTGACGCAAACATCTTGAAGTaGTTCTCGTCTGTCTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: IIYSHCSRYSRRPGDRGDANILK*FSSVLE Trigger: CTCCAAGACAGACGAGAACAACTTCAAGATGTTTGC...GTCACCCCGATCCCCCGGTCTTCTGCTGTATCTAGAACAGTGACTATAAATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | CTTGAAAACAAAAAGAACGAAGTCACAGAAGCAGGTTaGGTCGGTTGCTGGGCAGACATCAGGACGTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: LENKKNEVTEAG*VGCWADIRTSL Trigger: AAGTGACGTCCTGATGTCTGCCCAGCAACCGACTCAACCTGCTTCTGTGACTTCGTTCTTTTTGTTTTCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | ACGGACGCCATGCTGTGGAGCCTTTCAGGCATAGGATaGGGTATCTTCTGGAATAATCTTTTGTTTTGGACG | + |
|
Preference number: 3 (lower is better) Translates to: TDAMLWSLSGIG*GIFWNNLLFWT Trigger: CGTCCAAAACAAAAGATTATTCCAGAAGATACCTCATCCTATGCCTGAAAGGCTCCACAGCATGGCGTCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 72 bp | CGTGGGTCAGAGTGTGGAAGGAAACTGAATAGACTTTaGAAATGCCAAGCTCCTGTGTGTATGGTATTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RGSECGRKLNRL*KCQAPVCMVLG Trigger: ACCCAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACACTCTGACCCACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 72 bp | GCCTTCGGAATGCCTGAATTAAACGGTCGTCTTACATaGTGCTCCTCCCTGCAATTCAGATTCCAAGATGAT | + |
|
Preference number: 3 (lower is better) Translates to: AFGMPELNGRLT*CSSLQFRFQDD Trigger: ATCATCTTGGAATCTGAATTGCAGGGAGGAGCAGCATGTAAGACGACCGTTTAATTCAGGCATTCCGAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | ACCTGTAATCAACAGTTTGGATTTCTCTGTCACCTGTaGACTGTGACCTTCATTACATGTGTCCCAGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TCNQQFGFLCHL*TVTFITCVPGH Trigger: GTGGCCTGGGACACATGTAATGAAGGTCACAGTCCACAGGTGACAGAGAAATCCAAACTGTTGATTACAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACATCAATTGCTCTCTTCTaGGCAAGGGGAAGGCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTSIALF*ARGRLT Trigger: GGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGA...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR TCA 72 bp | ATCAACAGTTTGGATTTCTCTGTCACCTGTGGACTGTaGCCTTCATTACATGTGTCCCAGGCCACAAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: INSLDFSVTCGL*PSLHVSQATNS Trigger: TGAGTTTGTGGCCTGGGACACATGTAATGAAGGTCACAGTCCACAGGTGACAGAGAAATCCAAACTGTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | ATCTTAAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTaGGTGAGTGTTTCTGGTCAGTCTCTTCCTTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ILKYLLLLLPEC*VSVSGQSLPSQ Trigger: TTGAGAAGGAAGAGACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTTAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | TCGGGAATGTTCAAGACTTCGCCTGTTCTTGCCACTTaGCCAGCAATCCCTTTCTCAATGGAAAATCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: SGMFKTSPVLAT*PAIPFSMENLI Trigger: GATCAGATTTTCCATTGAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGCGAAGTCTTGAACATTCCCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | AATAGGTGGGGCACTGTACACAGAGAGAGACTGCTTTaGATCATCAGCTGCACTGGGTTTTTGTACAGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: NRWGTVHRERLL*IISCTGFLYSK Trigger: TTTACTGTACAAAAACCCAGTGCAGCTGATGATGCAAAGCAGTCTCTCTCTGTGTACAGTGCCCCACCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCTTTTACCCACAAGATTaGCTTGCTGGAGGAAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: KVSSPAPARVLSECFWSVFYPQD*LAGGNL Trigger: TAAATTTCCTCCAGCAAGCAAATCTTGTGGGTAAAA...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGGTCCTTTTATACGCTaGGTGACAGAATCCATGCGC | + |
|
Preference number: 3 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTGPFIR*VTESMR Trigger: GCGCATGGATTCTGTCACCAAGCGTATAAAAGGACC...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | AGAAGGCAGGCTGTGCTAATATATCTAGCACATACATaGACACACTTGGAAGAGCAGAGTTCACTGGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: RRQAVLIYLAHT*THLEEQSSLDE Trigger: CTCATCCAGTGAACTCTGCTCTTCCAAGTGTGTTCATGTATGTGCTAGATATATTAGCACAGCCTGCCTTCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | GATAGAAGATCAATTTGTGTGGATCGAATGGCTTTTTaGTGCAGCCAGTGTCACCTGTTTATAGACGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DRRSICVDRMAF*CSQCHLFIDVD Trigger: GTCCACGTCTATAAACAGGTGACACTGGCTGCAGCAAAAAGCCATTCGATCCACACAAATTGATCTTCTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 72 bp | TTCGGAATGCCTGAATTAAACGGTCGTCTTACATGCTaGTCCTCCCTGCAATTCAGATTCCAAGATGATAGA | + |
|
Preference number: 3 (lower is better) Translates to: FGMPELNGRLTC*SSLQFRFQDDR Trigger: TCTATCATCTTGGAATCTGAATTGCAGGGAGGAGCAGCATGTAAGACGACCGTTTAATTCAGGCATTCCGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR GCA 72 bp | GGAGAAAGCTGCTCTCCTTGGAAAGAATCCAGACGCTaGGTTTGTTCTTATGTTAAGTGTTTCACAGTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: GESCSPWKESRR*VCSYVKCFTVF Trigger: GAACACTGTGAAACACTTAACATAAGAACAAACGCAGCGTCTGGATTCTTTCCAAGGAGAGCAGCTTTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CCA 72 bp | TTGTTACTGTGTTCCTGTGGAGAAAGCTGCTCTCCTTaGAAAGAATCCAGACGCTGCGTTTGTTCTTATGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLLCSCGESCSP*KESRRCVCSYV Trigger: AACATAAGAACAAACGCAGCGTCTGGATTCTTTCCAAGGAGAGCAGCTTTCTCCACAGGAACACAGTAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACATCCTTTTCTCTCCTTTaGGGGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTSFSLL*GCVCVC Trigger: ACACACACACACACACCCCAAAAGGAGAGAAAAGGA...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CAA 90 bp | GATCAATACTTCACACTGGTATTGGCACTTACATATCCAAGAACATTTTCTCAGGGGGACAGGATTCAATaGCTCTCTTCTTGGCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DQYFTLVLALTYPRTFSQGDRIQ*LSSWQG Trigger: CCCTTGCCAAGAAGAGAGCAATTGAATCCTGTCCCC...CTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGAAAATCTGATCTCCTaGGTCTTCTTGAAGATGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LLFSLYKGIGAVAEGYSEENLIS*VFLKMG Trigger: GCCCATCTTCAAGAAGACCAAGGAGATCAGATTTTC...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR GCA 72 bp | TCAGAGTGTGGAAGGAAACTGAATAGACTTTGCAAATaGCAAGCTCCTGTGTGTATGGTATTGGGTGTATCA | + |
|
Preference number: 3 (lower is better) Translates to: SECGRKLNRLCK*QAPVCMVLGVS Trigger: TGATACACCCAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACACTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTGGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTACCTGTAATCAACAGTTaGGATTTCTCTGTCACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CGRKLNRLCKCQAPVCMVPVINS*DFSVTC Trigger: ACAGGTGACAGAGAAATCCAAACTGTTGATTACAGG...TACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAATGGAAGGAACAATGTaGCAAAGGTCTTCCCAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTMEGTM*QRSSQV Trigger: TACCTGGGAAGACCTTTGCAACATTGTTCCTTCCAT...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR TCA 72 bp | TATTCAATACAGCATTTGGCATTCCTTATGGATGTCTaGATGGTGAGAGGAGATACCATCTGGGTCAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: YSIQHLAFLMDV*MVRGDTIWVNV Trigger: CACATTGACCCAGATGGTATCTCCTCTCACCATTCAGACATCCATAAGGAATGCCAAATGCTGTATTGAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | AATTCAGATTCCAAGATGATAGAAGATCAATTTGTGTaGATCGAATGGCTTTTTGCTGCAGCCAGTGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: NSDSKMIEDQFV*IEWLFAAASVT Trigger: GGTGACACTGGCTGCAGCAAAAAGCCATTCGATCCACACAAATTGATCTTCTATCATCTTGGAATCTGAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATTGTTTTACCCACAAGATTaGCTTGCTGGAGGAAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: GRKLNRLCKCQAPVCMVLFYPQD*LAGGNL Trigger: TAAATTTCCTCCAGCAAGCAAATCTTGTGGGTAAAA...CAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | ATTTTGCTGCCCGGGATCAATACTTCACACTGGTATTaGCACTTACATATCCAAGAACATTTTCTCAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: ILLPGINTSHWY*HLHIQEHFLRN Trigger: GTTTCTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATCCCGGGCAGCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR CCA 72 bp | GACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATTaGGTGTATCAAAATCTATCCCAAAGATTCATCTTA | + |
|
Preference number: 3 (lower is better) Translates to: DFANAKLLCVWY*VYQNLSQRFIL Trigger: TAAGATGAATCTTTGGGATAGATTTTGATACACCCAATACCATACACACAGGAGCTTGGCATTTGCAAAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACAAAGCAAATGCAGGGTAGGAATATACAGAGAAGAGACTTTCAAAACCAAGACCTCTTTAAATTATaGCACTTGCGCACTTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: HTKQMQGRNIQRRDFQNQDLFKL*HLRTLQ Trigger: TTGTAAAGTGCGCAAGTGCAATAATTTAAAGAGGTC...TTGGTTTTGAAAGTCTCTTCTCTGTATATTCCTACCCTGCATTTGCTTTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR CCA 90 bp | AGCGATCCGTCGGGCCAGCACTGGTCACTCTTCAGGCTGGAGGGAGCTGGGGACGAGATGGTGGTACCCTaGGTGATGGGCCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SDPSGQHWSLFRLEGAGDEMVVP*VMGPAG Trigger: CCCTGCAGGGCCCATCACCCAGGGTACCACCATCTC...GTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGTGCTGGCCCGACGGATCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGTGGGCCCTGCAGGGATaGGCCGGGGTTGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLWALQG*AGVGLP Trigger: AGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCA...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGTGATGGGCCCTaGAGGGATGAGCCGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGLGDGP*RDEPGL Trigger: CAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAG...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTTGGGCCCTGCAGGGATaGGCCGGGGTTGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSWALQG*AGVGLP Trigger: AGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCA...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AGCGATCCGTCGGGCCAGCACTGGTCACTCTTCAGGCTGGAGGGAGCTGGGGACTTGTGCCCTTCCAGCTaGAGGATGGACACCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDPSGQHWSLFRLEGAGDLCPSS*RMDTVW Trigger: CCAGACGGTGTCCATCCTTCAGCTGGAAGGGCACAA...GTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGTGCTGGCCCGACGGATCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR GCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCTGGGTGATGGGCCCTaGAGGGATGAGCCGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLLGDGP*RDEPGL Trigger: CAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAG...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCGAGATGGTGGTACCCTaGGTGATGGGCCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGEMVVP*VMGPAG Trigger: CCCTGCAGGGCCCATCACCCAGGGTACCACCATCTC...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGGCTCCATGGTGGAGGTaGAGTACAGCGCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRAPWWR*STAPPG Trigger: CCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGC...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCTCCATGGTGGAGGTaGAGTACAGCGCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLAPWWR*STAPPG Trigger: CCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGC...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCCTGGCTCCTCGCTGCTaGCCCCAAACCAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ELATPSWEDAGKNLSCGLLAPRC*PQTRQW Trigger: CCACTGCCTGGTTTGGGGGCAGCAGCGAGGAGCCAG...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGGGGATGAGCCGGGGTTaGCCTTCCTTCATCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVGMSRG*PSFIPG Trigger: ACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCC...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTGGGATGAGCCGGGGTTaGCCTTCCTTCATCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLGMSRG*PSFIPG Trigger: ACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCC...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGAGATGGTGGTACCCTaGGTGATGGGCCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLEMVVP*VMGPAG Trigger: CCCTGCAGGGCCCATCACCCAGGGTACCACCATCTC...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTGAGATGGTGGTACCCTaGGTGATGGGCCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLEMVVP*VMGPAG Trigger: CCCTGCAGGGCCCATCACCCAGGGTACCACCATCTC...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGGCTCCATGGTGGAGGTaGAGTACAGCGCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMAPWWR*STAPPG Trigger: CCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGC...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 72 bp | TGCCCCTGCTCCAGCAGGTGTTGGCCAGCAAGGAGGTaGTCCCTATGGCCTCTGAGGTGTCTTGGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: CPCSSRCWPARR*SLWPLRCLGWV Trigger: CACCCAGCCAAGACACCTCAGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGGCTGTTGCAACCTCCTaGTGGCTGAGGCAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRAVATS*WLRQKA Trigger: GGCCTTCTGCCTCAGCCATCAGGAGGTTGCAACAGC...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGGGTGATGGGCCCTaGAGGGATGAGCCGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLLGDGP*RDEPGL Trigger: CAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAG...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCAAGCGCATGAGGCCTTaGCACTCCTCGGAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFKRMRP*HSSEVQ Trigger: CTGCACCTCCGAGGAGTGGCAAGGCCTCATGCGCTT...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGAGATGGTGGTACCCTaGGTGATGGGCCCTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSEMVVP*VMGPAG Trigger: CCCTGCAGGGCCCATCACCCAGGGTACCACCATCTC...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTGCTCCATGGTGGAGGTaGAGTACAGCGCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLAPWWR*STAPPG Trigger: CCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGC...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGGGTGTTGCTCCATGGTaGAGGTGGAGTACAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRGVAPW*RWSTAP Trigger: CGGCGCTGTACTCCACCTCCACCATGGAGCAACACC...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGGGTGTTGCTCCATGGTaGAGGTGGAGTACAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVGVAPW*RWSTAP Trigger: CGGCGCTGTACTCCACCTCCACCATGGAGCAACACC...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTGAATGGGAGGCAGCCTaGCTCCTCGCTGCTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSEWEAA*LLAAAP Trigger: GGGGGCAGCAGCGAGGAGCCAGGCTGCCTCCCATTC...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| 3UTR CAA 72 bp | CAGCTGAAGGATGGACACCGTCTGGGAGAAGTGGTGTaGCTCCATGGTGGAGGTGGAGTACAGCGCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLKDGHRLGEVV*LHGGGGVQRRQ Trigger: CTGGCGGCGCTGTACTCCACCTCCACCATGGAGCAACACCACTTCTCCCAGACGGTGTCCATCCTTCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGCAACCTCCTGATGGCTaGGGCAGAAGGCCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLQPPDG*GRRPLC Trigger: GCAAAGAGGCCTTCTGCCTCAGCCATCAGGAGGTTG...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTGCTGTTGCAACCTCCTaGTGGCTGAGGCAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSAVATS*WLRQKA Trigger: GGCCTTCTGCCTCAGCCATCAGGAGGTTGCAACAGC...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGTTGTGCCCTTCCAGCTaGAGGATGGACACCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLLCPSS*RMDTVW Trigger: CCAGACGGTGTCCATCCTTCAGCTGGAAGGGCACAA...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGTTGTGCCCTTCCAGCTaGAGGATGGACACCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRLCPSS*RMDTVW Trigger: CCAGACGGTGTCCATCCTTCAGCTGGAAGGGCACAA...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTTTGTGCCCTTCCAGCTaGAGGATGGACACCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRLCPSS*RMDTVW Trigger: CCAGACGGTGTCCATCCTTCAGCTGGAAGGGCACAA...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTTTGTGCCCTTCCAGCTaGAGGATGGACACCGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPPPDSAVLAWEQIAFGGLCPSS*RMDTVW Trigger: CCAGACGGTGTCCATCCTTCAGCTGGAAGGGCACAA...ACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCCCGTCAAACTGGGGCTaGGGAAACACTCGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELATPSWEDAGKNLSCGLPSNWG*GNTRSA Trigger: GGCTGACCGAGTGTTTCCTCAGCCCCAGTTTGACGG...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR GCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTCTGGGTGATGGGCCCTaGAGGGATGAGCCGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSLGDGP*RDEPGL Trigger: CAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAG...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTAAGCGCATGAGGCCTTaGCACTCCTCGGAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPKRMRP*HSSEVQ Trigger: CTGCACCTCCGAGGAGTGGCAAGGCCTCATGCGCTT...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCAAGCGCATGAGGCCTTaGCACTCCTCGGAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELATPSWEDAGKNLSCGLKRMRP*HSSEVQ Trigger: CTGCACCTCCGAGGAGTGGCAAGGCCTCATGCGCTT...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCTGGGAGAAGTGGTGTTaGTCCATGGTGGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGWEKWC*SMVEVE Trigger: CTCCACCTCCACCATGGAGCAACACCACTTCTCCCA...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGGGGAGGGGAGGGGGATGAGCCGGGGTTaGCCTTCCTTCATCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYKGIGAVAEGYSEGEGRGMSRG*PSFIPG Trigger: ACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCC...CCTCCCCTCCCCCTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGGTGTTGCTCCATGGTaGAGGTGGAGTACAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSGVAPW*RWSTAP Trigger: CGGCGCTGTACTCCACCTCCACCATGGAGCAACACC...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCAGGATGGACACCGTCTaGGAGAAGTGGTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGRMDTV*EKWCCS Trigger: GGAGCAACACCACTTCTCCCAGACGGTGTCCATCCT...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCCTGCTCGTACTCGCTaGAGCTCAGGGTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFPARTR*SSGWRR Trigger: TCTTCTCCACCCTGAGCTCCAGCGAGTACGAGCAGG...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGAGGCTCTGTGGGTaGGAGGATCTGCGTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVQRLCG*EDLRQG Trigger: ACCTTGACGCAGATCCTCCCACCCACAGAGCCTCTG...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 72 bp | AAGGCTTTGGCTGCAGACCCATCCACTGAGGATCAGTaGCTGGGACCTGTGCCCCTGCTCCAGCAGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KALAADPSTEDQ*LGPVPLLQQVL Trigger: CAACACCTGCTGGAGCAGGGGCACAGGTCCCAGCAACTGATCCTCAGTGGATGGGTCTGCAGCCAAAGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CAA 72 bp | CCAATGTCAAACAGGTCCGAGTACAGCTCCTTGTTCTaGTGGTCCACCTGGAAGAGCGCGCAGCGGTCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PMSNRSEYSSLF*WSTWKSAQRSA Trigger: CGCCGACCGCTGCGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGACCTGTTTGACATTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CAA 72 bp | AATAGCTCGATGTCCCGGCAGATGCGTGCTGGTAGGTaGAAGCGCATGAGGCCTTGCCACTCCTCGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSSMSRQMRAGR*KRMRPCHSSEV Trigger: CACCTCCGAGGAGTGGCAAGGCCTCATGCGCTTCAACCTACCAGCACGCATCTGCCGGGACATCGAGCTATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCAACCTCCTGATGGCTaGGGCAGAAGGCCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSQPPDG*GRRPLC Trigger: GCAAAGAGGCCTTCTGCCTCAGCCATCAGGAGGTTG...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTCAACCTCCTGATGGCTaGGGCAGAAGGCCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSQPPDG*GRRPLC Trigger: GCAAAGAGGCCTTCTGCCTCAGCCATCAGGAGGTTG...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCTCTCCTTGGTCTTCTTaGAGATGGGCTTCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGSPWSS*RWASPP Trigger: AGGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGA...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCCCTGTAGATGCATTCTaGGTGGCGGATCCTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGPVDAF*VADPVV Trigger: TACCACAGGATCCGCCACTCAGAATGCATCTACAGG...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTTGCAGTGTGCCACCGTaGCTGCATGCTTCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLCSVPP*LHASSC Trigger: ACAACTGGAAGCATGCAGTCACGGTGGCACACTGCA...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTTGCAGTGTGCCACCGTaGCTGCATGCTTCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRCSVPP*LHASSC Trigger: ACAACTGGAAGCATGCAGTCACGGTGGCACACTGCA...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCCCTCGGAGGTGCAGATaGTGTGGTAGGAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGPRRCR*CGRKAS Trigger: AGAAGCTTTCCTACCACAGCATCTGCACCTCCGAGG...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTTGGGAGAAGTGGTGTTaGTCCATGGTGGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPPPDSAVLAWEQIAFGGWEKWC*SMVEVE Trigger: CTCCACCTCCACCATGGAGCAACACCACTTCTCCCA...ACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTTGGGAGAAGTGGTGTTaGTCCATGGTGGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRWEKWC*SMVEVE Trigger: CTCCACCTCCACCATGGAGCAACACCACTTCTCCCA...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTGCTCCCACCTTTAAGTaGGAATGGGAGGCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPAPTFK*EWEAAW Trigger: CCAGGCTGCCTCCCATTCGCACTTAAAGGTGGGAGC...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTTGCAGGAGCCCACGGTaGCTTCTGTGGAGTCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSCRSPR*LLWSHC Trigger: GCAATGACTCCACAGAAGGCACCGTGGGCTCCTGCA...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGAGCTCCTTGTTCTTGTaGTCCACCTGGAAGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLSSLFL*STWKSA Trigger: CGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCT...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTAGCTCCTTGTTCTTGTaGTCCACCTGGAAGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLSSLFL*STWKSA Trigger: CGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCT...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCAGTGGTGTTGCTCCATaGTGGAGGTGGAGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFSGVAP*WRWSTA Trigger: CGCTGTACTCCACCTCCACCATGGAGCAACACCACT...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTACCGTCTGGGAGAAGTaGTGTTGCTCCATGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLTVWEK*CCSMVE Trigger: CTCCACCATGGAGCAACACCACTTCTCCCAGACGGT...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCCCTGCTCGTACTCGCTaGAGCTCAGGGTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGAPARTR*SSGWRR Trigger: TCTTCTCCACCCTGAGCTCCAGCGAGTACGAGCAGG...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGCCTGCTCGTACTCGCTaGAGCTCAGGGTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLPARTR*SSGWRR Trigger: TCTTCTCCACCCTGAGCTCCAGCGAGTACGAGCAGG...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGAGGCTCTGTGGGTaGGAGGATCTGCGTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMQRLCG*EDLRQG Trigger: ACCTTGACGCAGATCCTCCCACCCACAGAGCCTCTG...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTTCAGCAGAGGCTCTGTaGGTGGGAGGATCTGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSSAEAL*VGGSAS Trigger: TGACGCAGATCCTCCCACCCACAGAGCCTCTGCTGA...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ACGTGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTTGGGCCCTGCAGGGATaGGCCGGGGTTGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TCENRIAMQVEAVADSLCWALQG*AGVGLP Trigger: AGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCA...ACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | CTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTTCTCCTTGGTCTTCTTaGAGATGGGCTTCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPPPDSAVLAWEQIAFGGSPWSS*RWASPP Trigger: AGGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGA...ACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTCCTGTAGATGCATTCTaGGTGGCGGATCCTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRPVDAF*VADPVV Trigger: TACCACAGGATCCGCCACTCAGAATGCATCTACAGG...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCAGTGTGCCACCGTaGCTGCATGCTTCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ELATPSWEDAGKNLSCGLCSVPP*LHASSC Trigger: ACAACTGGAAGCATGCAGTCACGGTGGCACACTGCA...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGTGCAGTGTGCCACCGTaGCTGCATGCTTCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMCSVPP*LHASSC Trigger: ACAACTGGAAGCATGCAGTCACGGTGGCACACTGCA...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTTGCAGTGTGCCACCGTaGCTGCATGCTTCCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSCSVPP*LHASSC Trigger: ACAACTGGAAGCATGCAGTCACGGTGGCACACTGCA...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGGCAGAAGGCCTCTTTaGCCCAGTGCCTGTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSGRRPL*PSACTV Trigger: AACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCC...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCGGCAGAAGGCCTCTTTaGCCCAGTGCCTGTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGAGRRPL*PSACTV Trigger: AACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCC...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCCTCGGAGGTGCAGATaGTGTGGTAGGAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVPRRCR*CGRKAS Trigger: AGAAGCTTTCCTACCACAGCATCTGCACCTCCGAGG...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTGACCACCACCAGCCCAAGCGCATGAGGCCTTaGCACTCCTCGGAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGFNCSLLGKGKADHHQPKRMRP*HSSEVQ Trigger: CTGCACCTCCGAGGAGTGGCAAGGCCTCATGCGCTT...GGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGGTGTGCCACCGTGACTaGATGCTTCCAGTTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRVCHRD*MLPVVV Trigger: TACCACAACTGGAAGCATGCAGTCACGGTGGCACAC...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGGTGTGCCACCGTGACTaGATGCTTCCAGTTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVVCHRD*MLPVVV Trigger: TACCACAACTGGAAGCATGCAGTCACGGTGGCACAC...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTGTGTGCCACCGTGACTaGATGCTTCCAGTTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLVCHRD*MLPVVV Trigger: TACCACAACTGGAAGCATGCAGTCACGGTGGCACAC...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTGGGAGAAGTGGTGTTaGTCCATGGTGGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPWEKWC*SMVEVE Trigger: CTCCACCTCCACCATGGAGCAACACCACTTCTCCCA...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTATGATCTCCAGCACCTaGTCGTACTCGCTGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSMISST*SYSLEL Trigger: GAGCTCCAGCGAGTACGAGCAGGTGCTGGAGATCAT...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGATGATCTCCAGCACCTaGTCGTACTCGCTGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMMISST*SYSLEL Trigger: GAGCTCCAGCGAGTACGAGCAGGTGCTGGAGATCAT...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCTTCCTTCATCCCGGGTaGTATGAACACACACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGFLHPG*YEHTQA Trigger: AGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAA...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCACTACACACCTGCACCTaGTGTATTGCTACGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: APSRQCSAGLGANSIRRSLHTCT*CIATEA Trigger: GGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAG...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGCTACACACCTGCACCTaGTGTATTGCTACGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRLHTCT*CIATEA Trigger: GGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAG...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGAGCTCCTTGTTCTTGTaGTCCACCTGGAAGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLSSLFL*STWKSA Trigger: CGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCT...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGCTGTGGTCCAGGTCATaGCACAGACACGCAATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QGTGHTLMGGCRQEPLLWLWSRS*HRHAIS Trigger: GCTAATTGCGTGTCTGTGCCATGACCTGGACCACAG...CCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTGTGGTCCAGGTCATaGCACAGACACGCAATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFLWSRS*HRHAIS Trigger: GCTAATTGCGTGTCTGTGCCATGACCTGGACCACAG...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTTTACTGAAGCCCCTGTaGTCCAGGTCATGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPPPDSAVLAWEQIAFGGLLKPL*SRSWHR Trigger: TCTGTGCCATGACCTGGACCACAGGGGCTTCAGTAA...ACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGTTACTGAAGCCCCTGTaGTCCAGGTCATGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVLLKPL*SRSWHR Trigger: TCTGTGCCATGACCTGGACCACAGGGGCTTCAGTAA...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTGGTGTTGCTCCATGGTaGAGGTGGAGTACAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSGVAPW*RWSTAP Trigger: CGGCGCTGTACTCCACCTCCACCATGGAGCAACACC...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGAGTGGTGTTGCTCCATaGTGGAGGTGGAGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLSGVAP*WRWSTA Trigger: CGCTGTACTCCACCTCCACCATGGAGCAACACCACT...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTAGTGGTGTTGCTCCATaGTGGAGGTGGAGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSSGVAP*WRWSTA Trigger: CGCTGTACTCCACCTCCACCATGGAGCAACACCACT...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTACCGTCTGGGAGAAGTaGTGTTGCTCCATGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSTVWEK*CCSMVE Trigger: CTCCACCATGGAGCAACACCACTTCTCCCAGACGGT...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCACCGTCTGGGAGAAGTaGTGTTGCTCCATGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ELATPSWEDAGKNLSCGLTVWEK*CCSMVE Trigger: CTCCACCATGGAGCAACACCACTTCTCCCAGACGGT...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGACCGTCTGGGAGAAGTaGTGTTGCTCCATGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMTVWEK*CCSMVE Trigger: CTCCACCATGGAGCAACACCACTTCTCCCAGACGGT...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGAGGATGGACACCGTCTaGGAGAAGTGGTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLRMDTV*EKWCCS Trigger: GGAGCAACACCACTTCTCCCAGACGGTGTCCATCCT...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCGCTGGAGCTCAGGGTaGAGAAGATATTGTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFRWSSG*RRYCAL Trigger: AAGGGCACAATATCTTCTCCACCCTGAGCTCCAGCG...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCGCTGGAGCTCAGGGTaGAGAAGATATTGTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPPPDSAVLAWEQIAFGGRWSSG*RRYCAL Trigger: AAGGGCACAATATCTTCTCCACCCTGAGCTCCAGCG...ACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AGCGATCCGTCGGGCCAGCACTGGTCACTCTTCAGGCTGGAGGGAGCTGGGGACTGGTATAGCAGGGAATaGCCACAGCATTGTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SDPSGQHWSLFRLEGAGDWYSRE*PQHCRI Trigger: GATTCTACAATGCTGTGGCCATTCCCTGCTATACCA...GTCCCCAGCTCCCTCCAGCCTGAAGAGTGACCAGTGCTGGCCCGACGGATCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTGGATCTGCGTCAAGGTaGTATAGCAGGGAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRGSASR*YSREWP Trigger: TGGCCATTCCCTGCTATACCACCTTGACGCAGATCC...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTTCAGCAGAGGCTCTGTaGGTGGGAGGATCTGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLSAEAL*VGGSAS Trigger: TGACGCAGATCCTCCCACCCACAGAGCCTCTGCTGA...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCCCACGGTGCCTTCTGTaGAGTCATTGCTCATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGAPRCLL*SHCSSA Trigger: GGCAGATGAGCAATGACTCCACAGAAGGCACCGTGG...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| 3UTR CAA 72 bp | TCCTCCCCAATGTCAAACAGGTCCGAGTACAGCTCCTaGTTCTTGTGGTCCACCTGGAAGAGCGCGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPMSNRSEYSS*FLWSTWKSAQR Trigger: CCGCTGCGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGACCTGTTTGACATTGGGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCTCTCCTTGGTCTTCTTaGAGATGGGCTTCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGASPWSS*RWASPP Trigger: AGGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGA...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCCCTGTAGATGCATTCTaGGTGGCGGATCCTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGAPVDAF*VADPVV Trigger: TACCACAGGATCCGCCACTCAGAATGCATCTACAGG...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTGCGCTCGAGGTCTGTaGAGAGGCCATTGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGTGHTLMGGCRQEPLLWCARGL*RGHCCF Trigger: AAAACAACAATGGCCTCTTCACAGACCTCGAGCGCA...CCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCATATCCTGGTACCTGCTaGCTTCCTTGGGAGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: APSRQCSAGLGANSIRRSYPGTC*LPWEMV Trigger: AACCATCTCCCAAGGAAGTCAGCAGGTACCAGGATA...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR GCA 90 bp | CTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTAAAGAACAGACTGGATaGGGGTTCCTGATTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPPDSAVLAWEQIAFGGKEQTG*GFLIPG Trigger: GCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTT...ACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCAGCAAGATTGGCTGTTaGAACCTCCTGATGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFSKIGC*NLLMAE Trigger: CTCAGCCATCAGGAGGTTGCAACAGCCAATCTTGCT...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTACAGTGCAAGGCCAGTaGGCAGAAGACAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRTVQGQ*AEDSKH Trigger: ATGTTTGCTGTCTTCTGCGCACTGGCCTTGCACTGT...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGACAGTGCAAGGCCAGTaGGCAGAAGACAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLTVQGQ*AEDSKH Trigger: ATGTTTGCTGTCTTCTGCGCACTGGCCTTGCACTGT...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCCCTCGGAGGTGCAGATaGTGTGGTAGGAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGAPRRCR*CGRKAS Trigger: AGAAGCTTTCCTACCACAGCATCTGCACCTCCGAGG...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCCTCGGAGGTGCAGATaGTGTGGTAGGAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSPRRCR*CGRKAS Trigger: AGAAGCTTTCCTACCACAGCATCTGCACCTCCGAGG...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCGGCATACATGCAGTGTaGCACCGTGACTGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGAGIHAV*HRDCML Trigger: AAGCATGCAGTCACGGTGGCACACTGCATGTATGCC...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTGGCATACATGCAGTGTaGCACCGTGACTGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSGIHAV*HRDCML Trigger: AAGCATGCAGTCACGGTGGCACACTGCATGTATGCC...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTTGGGAGAAGTGGTGTTaGTCCATGGTGGAGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLWEKWC*SMVEVE Trigger: CTCCACCTCCACCATGGAGCAACACCACTTCTCCCA...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCAAGCAAAGAACAGACTaGATGCGGGTTCCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGKQRTD*MRVPDS Trigger: GGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTT...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGCTACACACCTGCACCTaGTGTATTGCTACGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMLHTCT*CIATEA Trigger: GGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAG...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTACACACCTGCACCTaGTGTATTGCTACGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSLHTCT*CIATEA Trigger: GGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAG...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCCTACACACCTGCACCTaGTGTATTGCTACGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELATPSWEDAGKNLSCGLLHTCT*CIATEA Trigger: GGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAG...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGTGCCTCGGCTCACTATaGGCATACACAGAATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRCLGSL*AYTECS Trigger: GGAACATTCTGTGTATGCCCATAGTGAGCCGAGGCA...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCATGCCTCGGCTCACTATaGGCATACACAGAATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: APSRQCSAGLGANSIRRSCLGSL*AYTECS Trigger: GGAACATTCTGTGTATGCCCATAGTGAGCCGAGGCA...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTCTGTGGTCCAGGTCATaGCACAGACACGCAATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPLWSRS*HRHAIS Trigger: GCTAATTGCGTGTCTGTGCCATGACCTGGACCACAG...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTCTGTGGTCCAGGTCATaGCACAGACACGCAATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSLWSRS*HRHAIS Trigger: GCTAATTGCGTGTCTGTGCCATGACCTGGACCACAG...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGCTGTGGTCCAGGTCATaGCACAGACACGCAATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMLWSRS*HRHAIS Trigger: GCTAATTGCGTGTCTGTGCCATGACCTGGACCACAG...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTTACTGAAGCCCCTGTaGTCCAGGTCATGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLLLKPL*SRSWHR Trigger: TCTGTGCCATGACCTGGACCACAGGGGCTTCAGTAA...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGCGCTGGAGCTCAGGGTaGAGAAGATATTGTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMRWSSG*RRYCAL Trigger: AAGGGCACAATATCTTCTCCACCCTGAGCTCCAGCG...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCGGATCTGCGTCAAGGTaGTATAGCAGGGAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELATPSWEDAGKNLSCGLGSASR*YSREWP Trigger: TGGCCATTCCCTGCTATACCACCTTGACGCAGATCC...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGGGATCTGCGTCAAGGTaGTATAGCAGGGAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMGSASR*YSREWP Trigger: TGGCCATTCCCTGCTATACCACCTTGACGCAGATCC...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCATCATCCCGGGTGGTATaGACACACACAGGCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: APSRQCSAGLGANSIRRSSSRVV*THTGYY Trigger: ATAATAGCCTGTGTGTGTTCATACCACCCGGGATGA...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGTCATCCCGGGTGGTATaGACACACACAGGCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVSSRVV*THTGYY Trigger: ATAATAGCCTGTGTGTGTTCATACCACCCGGGATGA...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTTGCGCTCGAGGTCTGTaGAGAGGCCATTGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSCARGL*RGHCCF Trigger: AAAACAACAATGGCCTCTTCACAGACCTCGAGCGCA...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGTGCGCTCGAGGTCTGTaGAGAGGCCATTGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMCARGL*RGHCCF Trigger: AAAACAACAATGGCCTCTTCACAGACCTCGAGCGCA...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTATCCTGGTACCTGCTaGCTTCCTTGGGAGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLYPGTC*LPWEMV Trigger: AACCATCTCCCAAGGAAGTCAGCAGGTACCAGGATA...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR GCA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCAAAGAACAGACTGGATaGGGGTTCCTGATTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ELATPSWEDAGKNLSCGLKEQTG*GFLIPG Trigger: GCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTT...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCAGCAAGATTGGCTGTTaGAACCTCCTGATGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGASKIGC*NLLMAE Trigger: CTCAGCCATCAGGAGGTTGCAACAGCCAATCTTGCT...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGACAGTGCAAGGCCAGTaGGCAGAAGACAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMTVQGQ*AEDSKH Trigger: ATGTTTGCTGTCTTCTGCGCACTGGCCTTGCACTGT...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTATGATCTCCAGCACCTaGTCGTACTCGCTGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSMISST*SYSLEL Trigger: GAGCTCCAGCGAGTACGAGCAGGTGCTGGAGATCAT...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTTCGTACACGACTCCCTaGATATTCGTATCCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRSYTTP*IFVSWY Trigger: GTACCAGGATACGAATATGCAGGGAGTCGTGTACGA...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGTCGTACACGACTCCCTaGATATTCGTATCCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRSYTTP*IFVSWY Trigger: GTACCAGGATACGAATATGCAGGGAGTCGTGTACGA...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCATCGTACACGACTCCCTaGATATTCGTATCCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: APSRQCSAGLGANSIRRSSYTTP*IFVSWY Trigger: GTACCAGGATACGAATATGCAGGGAGTCGTGTACGA...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGTTCCTTCATCCCGGGTaGTATGAACACACACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMFLHPG*YEHTQA Trigger: AGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAA...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCGGGATGAGCCGGGGTTaGCCTTCCTTCATCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVSSPAPARVLSECFWSVGMSRG*PSFIPG Trigger: ACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCC...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAAGCAAAGAACAGACTaGATGCGGGTTCCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRKQRTD*MRVPDS Trigger: GGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTT...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAAAGCAAAGAACAGACTaGATGCGGGTTCCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: APSRQCSAGLGANSIRRSKQRTD*MRVPDS Trigger: GGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTT...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTAAGCCCAAGCAAGATTaGCTGTTGCAACCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPPPDSAVLAWEQIAFGGKPKQD*LLQPPD Trigger: ATCAGGAGGTTGCAACAGCCAATCTTGCTTGGGCTT...ACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTTGCCTCGGCTCACTATaGGCATACACAGAATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSCLGSL*AYTECS Trigger: GGAACATTCTGTGTATGCCCATAGTGAGCCGAGGCA...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTGACCACCACCAGCCCAGTGGTGTTGCTCCATaGTGGAGGTGGAGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TGFNCSLLGKGKADHHQPSGVAP*WRWSTA Trigger: CGCTGTACTCCACCTCCACCATGGAGCAACACCACT...GGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR CCA 90 bp | TTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGGGGAGGGGAGGCGCTGGAGCTCAGGGTaGAGAAGATATTGTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LYKGIGAVAEGYSEGEGRRWSSG*RRYCAL Trigger: AAGGGCACAATATCTTCTCCACCCTGAGCTCCAGCG...CCTCCCCTCCCCCTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 72 bp | GTGTCTTGGCTGGGTGTGGATGGCGGCGGACCTCTTTaGTTACTGTGTTCCTGTGGAGAAAGCTGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSWLGVDGGGPL*LLCSCGESCSP Trigger: AGGAGAGCAGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CAA 72 bp | TTCTCGTCTGTCTTGGAGAAGGCGCTACCGCTGATCTaGTTCACCATCTGCACCACGCCAATCACGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSSVLEKALPLI*FTICTTPITLP Trigger: AGGCAGCGTGATTGGCGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGCCTTCTCCAAGACAGACGAGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCATCCCGGGTGGTATaGACACACACAGGCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPSSRVV*THTGYY Trigger: ATAATAGCCTGTGTGTGTTCATACCACCCGGGATGA...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTTCTCCTTGGTCTTCTTaGAGATGGGCTTCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSSPWSS*RWASPP Trigger: AGGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGA...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTCCTGTAGATGCATTCTaGGTGGCGGATCCTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSPVDAF*VADPVV Trigger: TACCACAGGATCCGCCACTCAGAATGCATCTACAGG...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCAGGCCATTGTTGTTTTaGAGTATGGCATACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGRPLLF*SMAYMQ Trigger: CTGCATGTATGCCATACTTCAAAACAACAATGGCCT...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTTGCGCTCGAGGTCTGTaGAGAGGCCATTGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLCARGL*RGHCCF Trigger: AAAACAACAATGGCCTCTTCACAGACCTCGAGCGCA...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTATTACCTTCTCCCACTaGTTGAGGTTATCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSITFSH*LRLSLQ Trigger: CTGCAGGGATAACCTCAATCAGTGGGAGAAGGTAAT...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGTCCAAGGAAGTACAGTaGAAATCCGTCGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVSKEVQ*KSVGFC Trigger: ACAAAAGCCGACGGATTTGCACTGTACTTCCTTGGA...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTTCCAAGGAAGTACAGTaGAAATCCGTCGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLSKEVQ*KSVGFC Trigger: ACAAAAGCCGACGGATTTGCACTGTACTTCCTTGGA...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGGGGAGGGGAGGAGCAAGATTGGCTGTTaGAACCTCCTGATGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LYKGIGAVAEGYSEGEGRSKIGC*NLLMAE Trigger: CTCAGCCATCAGGAGGTTGCAACAGCCAATCTTGCT...CCTCCCCTCCCCCTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTGTGTGCCACCGTGACTaGATGCTTCCAGTTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSVCHRD*MLPVVV Trigger: TACCACAACTGGAAGCATGCAGTCACGGTGGCACAC...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCTACATCTCCTCCAACTaGTTCCTGTTCCCAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QARTSPVVSAPSRQCSAGYISSN*FLFPKY Trigger: ATACTTTGGGAACAGGAAGCAGTTGGAGGAGATGTA...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GTGCCCCTGCTCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATGGCCTCTTACATCTCCTCCAACTaGTTCCTGTTCCCAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: VPLLQQVLASKEVVPMASYISSN*FLFPKY Trigger: ATACTTTGGGAACAGGAAGCAGTTGGAGGAGATGTA...AGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR CCA 90 bp | CCTCTGAGGTGTCTTGGCTGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTTTCCTTCATCCCGGGTaGTATGAACACACACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLRCLGWVWMAADLFCYCFLHPG*YEHTQA Trigger: AGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAA...ACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR CCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTAAGCAAAGAACAGACTaGATGCGGGTTCCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPKQRTD*MRVPDS Trigger: GGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTT...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGAAGCAAAGAACAGACTaGATGCGGGTTCCTGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLKQRTD*MRVPDS Trigger: GGAATCAGGAACCCGCATCCAGTCTGTTCTTTGCTT...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCAAGCCCAAGCAAGATTaGCTGTTGCAACCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGAKPKQD*LLQPPD Trigger: ATCAGGAGGTTGCAACAGCCAATCTTGCTTGGGCTT...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTTGCCTCGGCTCACTATaGGCATACACAGAATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLCLGSL*AYTECS Trigger: GGAACATTCTGTGTATGCCCATAGTGAGCCGAGGCA...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTCGCTGGAGCTCAGGGTaGAGAAGATATTGTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSRWSSG*RRYCAL Trigger: AAGGGCACAATATCTTCTCCACCCTGAGCTCCAGCG...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGAACAACCGAACCGGGATTCTCTGGTCTCCATGCTATCCTGAAAATCCCCCCTGCTCGTACTCGCTaGAGCTCAGGGTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRTTEPGFSGLHAILKIPPARTR*SSGWRR Trigger: TCTTCTCCACCCTGAGCTCCAGCGAGTACGAGCAGG...GGGGATTTTCAGGATAGCATGGAGACCAGAGAATCCCGGTTCGGTTGTTCTCAC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGTGGTATAGCAGGGAATaGCCACAGCATTGTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVWYSRE*PQHCRI Trigger: GATTCTACAATGCTGTGGCCATTCCCTGCTATACCA...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACTGGGCCCTGCAGGGATaGGCCGGGGTTGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHWALQG*AGVGLP Trigger: AGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCA...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCCAACCTCCTGATGGCTaGGGCAGAAGGCCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVSSPAPARVLSECFWSVQPPDG*GRRPLC Trigger: GCAAAGAGGCCTTCTGCCTCAGCCATCAGGAGGTTG...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTAGACAGCAAACATCTTaGAGTTGTTCTCGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLRQQTS*SCSRLS Trigger: AGACAGACGAGAACAACTTCAAGATGTTTGCTGTCT...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGGGGAGGGGAGGATTACCTTCTCCCACTaGTTGAGGTTATCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LYKGIGAVAEGYSEGEGRITFSH*LRLSLQ Trigger: CTGCAGGGATAACCTCAATCAGTGGGAGAAGGTAAT...CCTCCCCTCCCCCTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTTCCAAGGAAGTACAGTaGAAATCCGTCGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSSKEVQ*KSVGFC Trigger: ACAAAAGCCGACGGATTTGCACTGTACTTCCTTGGA...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTCCAAGGAAGTACAGTaGAAATCCGTCGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLSKEVQ*KSVGFC Trigger: ACAAAAGCCGACGGATTTGCACTGTACTTCCTTGGA...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCACACAGGCTATTATTaGACTCTCCAAGGAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFHTGYY*TLQGST Trigger: TGTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTG...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTCACACAGGCTATTATTaGACTCTCCAAGGAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRHTGYY*TLQGST Trigger: TGTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTG...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGTACATCTCCTCCAACTaGTTCCTGTTCCCAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRYISSN*FLFPKY Trigger: ATACTTTGGGAACAGGAAGCAGTTGGAGGAGATGTA...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTTTCCTTCATCCCGGGTaGTATGAACACACACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSFLHPG*YEHTQA Trigger: AGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAA...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTACAGAATGTTCCTCGTaGTGTAGCCTGTGTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLTECSS*CSLCTG Trigger: ACCTGTACACAGGCTACACCACGAGGAACATTCTGT...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTGGTATAGCAGGGAATaGCCACAGCATTGTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPWYSRE*PQHCRI Trigger: GATTCTACAATGCTGTGGCCATTCCCTGCTATACCA...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 72 bp | GTTTGGCGAGACCTCTACACACCTGCACCTGGTGTATaGCTACGGAAGCCCAAGCAAGATTGGCTGTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VWRDLYTPAPGV*LRKPKQDWLLQ Trigger: TTGCAACAGCCAATCTTGCTTGGGCTTCCGTAGCAATACACCAGGTGCAGGTGTGTAGAGGTCTCGCCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CAA 72 bp | AAGGCCAGTGCGCAGAAGACAGCAAACATCTTGAAGTaGTTCTCGTCTGTCTTGGAGAAGGCGCTACCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KASAQKTANILK*FSSVLEKALPL Trigger: CAGCGGTAGCGCCTTCTCCAAGACAGACGAGAACAACTTCAAGATGTTTGCTGTCTTCTGCGCACTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| 3UTR CAA 72 bp | TCCAGGTCATGGCACAGACACGCAATTAGCAGGCCTTaGCGCTCGAGGTCTGTGAAGAGGCCATTGTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRSWHRHAISRP*RSRSVKRPLLF Trigger: AAACAACAATGGCCTCTTCACAGACCTCGAGCGCAAAGGCCTGCTAATTGCGTGTCTGTGCCATGACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGTGGGCCCTGCAGGGATaGGCCGGGGTTGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGWALQG*AGVGLP Trigger: AGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCA...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTTGGGCCCTGCAGGGATaGGCCGGGGTTGGCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MPYFYFLCIKGLAQLPKAWALQG*AGVGLP Trigger: AGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCA...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTAGACAGCAAACATCTTaGAGTTGTTCTCGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSRQQTS*SCSRLS Trigger: AGACAGACGAGAACAACTTCAAGATGTTTGCTGTCT...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGAGACAGCAAACATCTTaGAGTTGTTCTCGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLRQQTS*SCSRLS Trigger: AGACAGACGAGAACAACTTCAAGATGTTTGCTGTCT...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCAGACAGCAAACATCTTaGAGTTGTTCTCGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGARQQTS*SCSRLS Trigger: AGACAGACGAGAACAACTTCAAGATGTTTGCTGTCT...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTAGGCCATTGTTGTTTTaGAGTATGGCATACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSRPLLF*SMAYMQ Trigger: CTGCATGTATGCCATACTTCAAAACAACAATGGCCT...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCAGGCCATTGTTGTTTTaGAGTATGGCATACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQCSAGLGANSIRRSGGARPLLF*SMAYMQ Trigger: CTGCATGTATGCCATACTTCAAAACAACAATGGCCT...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCTGTGGAGAAAGCTTATCCTGGTACCTGCTaGCTTCCTTGGGAGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WVWMAADLFCYCVPVEKAYPGTC*LPWEMV Trigger: AACCATCTCCCAAGGAAGTCAGCAGGTACCAGGATA...AGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGCTGGGTGATGGGCCCTaGAGGGATGAGCCGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLFSLYKGIGAVAEGYSELGDGP*RDEPGL Trigger: CAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAG...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTTACATCTCCTCCAACTaGTTCCTGTTCCCAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSYISSN*FLFPKY Trigger: ATACTTTGGGAACAGGAAGCAGTTGGAGGAGATGTA...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAGCCTGGCTCCTCGCTaGTGCCCCCAAACCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHSLAPR*CPQTRQ Trigger: CTGCCTGGTTTGGGGGCAGCAGCGAGGAGCCAGGCT...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS-3UTR CCA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCATGTTGTTTTGAAGTATaGCATACATGCAGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: APSRQCSAGLGANSIRRSCCFEV*HTCSVP Trigger: TGGCACACTGCATGTATGCCATACTTCAAAACAACA...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTTGTTGTTTTGAAGTATaGCATACATGCAGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRCCFEV*HTCSVP Trigger: TGGCACACTGCATGTATGCCATACTTCAAAACAACA...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCACCGTCTGGGAGAAGTaGTGTTGCTCCATGGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVSSPAPARVLSECFWSVTVWEK*CCSMVE Trigger: CTCCACCATGGAGCAACACCACTTCTCCCAGACGGT...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAACAGTCCGTCATAGGTTTCCCAATGCCAGGGTCCTTTTATACGCTTGGCAGAGGCTCTGTGGGTaGGAGGATCTGCGTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKTVRHRFPNARVLLYAWQRLCG*EDLRQG Trigger: ACCTTGACGCAGATCCTCCCACCCACAGAGCCTCTG...CCAAGCGTATAAAAGGACCCTGGCATTGGGAAACCTATGACGGACTGTTTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TCGAGTCAGCCTGACACTTTGCAACAGGGGGAGTCTGTGACTGATGGAGAGTCATCATCCCGGGTGGTATaGACACACACAGGCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SSQPDTLQQGESVTDGESSSRVV*THTGYY Trigger: ATAATAGCCTGTGTGTGTTCATACCACCCGGGATGA...TGACTCTCCATCAGTCACAGACTCCCCCTGTTGCAAAGTGTCAGGCTGACTCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR TCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTAGGCCATTGTTGTTTTaGAGTATGGCATACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLRPLLF*SMAYMQ Trigger: CTGCATGTATGCCATACTTCAAAACAACAATGGCCT...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCACACAGGCTATTATTaGACTCTCCAAGGAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLHTGYY*TLQGST Trigger: TGTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTG...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTCTTTTCCACAGTCTCTaGACTAACACTTTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPLFHSL*TNTFRN Trigger: GTTTCTGAAAGTGTTAGTGCAGAGACTGTGGAAAAG...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CCA 90 bp | GCAAAAACAGTCCGTCATAGGTTTCCCAATGCCAGGGTCCTTTTATACGCTTGGAGCTCCTTGTTCTTGTaGTCCACCTGGAAGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: AKTVRHRFPNARVLLYAWSSLFL*STWKSA Trigger: CGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCT...CCAAGCGTATAAAAGGACCCTGGCATTGGGAAACCTATGACGGACTGTTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGTCGCTCCATGGTGGAGGTaGAGTACAGCGCCGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GQIQGDFCKIPTSTAKTVAPWWR*STAPPG Trigger: CCCTGGCGGCGCTGTACTCCACCTCCACCATGGAGC...GACTGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAACAGTCCGTCATAGGTTTCCCAATGCCAGGGTCCTTTTATACGCTTGGAGGATGGACACCGTCTaGGAGAAGTGGTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AKTVRHRFPNARVLLYAWRMDTV*EKWCCS Trigger: GGAGCAACACCACTTCTCCCAGACGGTGTCCATCCT...CCAAGCGTATAAAAGGACCCTGGCATTGGGAAACCTATGACGGACTGTTTTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCGGATCTGCGTCAAGGTaGTATAGCAGGGAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVSSPAPARVLSECFWSVGSASR*YSREWP Trigger: TGGCCATTCCCTGCTATACCACCTTGACGCAGATCC...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| 3UTR CAA 72 bp | CAGTGCAAGGCCAGTGCGCAGAAGACAGCAAACATCTaGAAGTTGTTCTCGTCTGTCTTGGAGAAGGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QCKASAQKTANI*KLFSSVLEKAL Trigger: TAGCGCCTTCTCCAAGACAGACGAGAACAACTTCAAGATGTTTGCTGTCTTCTGCGCACTGGCCTTGCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATTGGCTGTTGCAACCTCCTaGTGGCTGAGGCAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRKLNRLCKCQAPVCMVLAVATS*WLRQKA Trigger: GGCCTTCTGCCTCAGCCATCAGGAGGTTGCAACAGC...CAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTAGCTGTTGCAACCTCCTaGTGGCTGAGGCAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: CGRKLNRLCKCQAPVCMVAVATS*WLRQKA Trigger: GGCCTTCTGCCTCAGCCATCAGGAGGTTGCAACAGC...TACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGCCGTCAAACTGGGGCTaGGGAAACACTCGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVPSNWG*GNTRSA Trigger: GGCTGACCGAGTGTTTCCTCAGCCCCAGTTTGACGG...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR GCA 90 bp | CACACAAAGCAAATGCAGGGTAGGAATATACAGAGAAGAGACTTTCAAAACCAACTGGGTGATGGGCCCTaGAGGGATGAGCCGGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTKQMQGRNIQRRDFQNQLGDGP*RDEPGL Trigger: CAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAG...TTGGTTTTGAAAGTCTCTTCTCTGTATATTCCTACCCTGCATTTGCTTTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR GCA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCAGCAAGATTGGCTGTTaGAACCTCCTGATGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVSSPAPARVLSECFWSVSKIGC*NLLMAE Trigger: CTCAGCCATCAGGAGGTTGCAACAGCCAATCTTGCT...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTGTGACAGTGCAAGGCCAGTaGGCAGAAGACAGCAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: CENRIAMQVEAVADSLCVTVQGQ*AEDSKH Trigger: ATGTTTGCTGTCTTCTGCGCACTGGCCTTGCACTGT...CACACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR GCA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTCAGCCCAGAATTCTaGATATATATCATTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLLSPEF*IYIIRC Trigger: ACAGCGAATGATATATATGCAGAATTCTGGGCTGAG...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCCATTATGGGAGAATATCTCAGCGATCCGTCGGGCCAGCACTGGTCACTCGTACACGACTCCCTaGATATTCGTATCCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLPLWENISAIRRASTGHSYTTP*IFVSWY Trigger: GTACCAGGATACGAATATGCAGGGAGTCGTGTACGA...GTGACCAGTGCTGGCCCGACGGATCGCTGAGATATTCTCCCATAATGGCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR CCA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGCAAGTAGAGAGTCTATaGCAACTATGTTATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRQVESL*QLCYQS Trigger: ACTTTGATAACATAGTTGCCATAGACTCTCTACTTG...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGCCCCAAACCAGGCAGTaGGTTCCTCCTCTGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVPQTRQ*VPPLGA Trigger: AGCTCCCAGAGGAGGAACCCACTGCCTGGTTTGGGG...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| 3UTR CAA 72 bp | GATACGTCGAGTAGGAAGTCATTCAGTTCGGTCTGTTaGGCGAGACCTCTACACACCTGCACCTGGTGTATT | + |
|
Preference number: 4 (lower is better) Translates to: DTSSRKSFSSVC*ARPLHTCTWCI Trigger: AATACACCAGGTGCAGGTGTGTAGAGGTCTCGCCAAACAGACCGAACTGAATGACTTCCTACTCGACGTATC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGCAACCTCCTGATGGCTaGGGCAGAAGGCCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVQPPDG*GRRPLC Trigger: GCAAAGAGGCCTTCTGCCTCAGCCATCAGGAGGTTG...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTGCTGTTGCAACCTCCTaGTGGCTGAGGCAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MPYFYFLCIKGLAQLPKAAVATS*WLRQKA Trigger: GGCCTTCTGCCTCAGCCATCAGGAGGTTGCAACAGC...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GCAAAAACAGTCCGTCATAGGTTTCCCAATGCCAGGGTCCTTTTATACGCTTGGAAAGAACAGACTGGATaGGGGTTCCTGATTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AKTVRHRFPNARVLLYAWKEQTG*GFLIPG Trigger: GCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTT...CCAAGCGTATAAAAGGACCCTGGCATTGGGAAACCTATGACGGACTGTTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCCCTGCAATTCAGATTCCAAGATGATAGAAGATCAATTTGTGTGGATCGAAAGCGCATGAGGCCTTaGCACTCCTCGGAGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQFRFQDDRRSICVDRKRMRP*HSSEVQ Trigger: CTGCACCTCCGAGGAGTGGCAAGGCCTCATGCGCTT...TCGATCCACACAAATTGATCTTCTATCATCTTGGAATCTGAATTGCAGGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCACTGATGGGAGAACACACTCATGATAATTTCCTTATGGAGAGCTACCTGATGATCTCCAGCACCTaGTCGTACTCGCTGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SALMGEHTHDNFLMESYLMISST*SYSLEL Trigger: GAGCTCCAGCGAGTACGAGCAGGTGCTGGAGATCAT...CAGGTAGCTCTCCATAAGGAAATTATCATGAGTGTGTTCTCCCATCAGTGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGATTCAATTGCTCTCTTCTTGGCAAGGGGAAGGCTGACCACCACCAGCCCCTCAGCCCAGAATTCTaGATATATATCATTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGFNCSLLGKGKADHHQPLSPEF*IYIIRC Trigger: ACAGCGAATGATATATATGCAGAATTCTGGGCTGAG...GGGCTGGTGGTGGTCAGCCTTCCCCTTGCCAAGAAGAGAGCAATTGAATCCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR GCA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTCTTTTCCACAGTCTCTaGACTAACACTTTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSLFHSL*TNTFRN Trigger: GTTTCTGAAAGTGTTAGTGCAGAGACTGTGGAAAAG...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCAAGTAGAGAGTCTATaGCAACTATGTTATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSQVESL*QLCYQS Trigger: ACTTTGATAACATAGTTGCCATAGACTCTCTACTTG...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAAAATAGAATAGCCATGCAAGTGGAAGCCGTGGCTGACAGCCTGTGTGTGACAGAATGTTCCTCGTaGTGTAGCCTGTGTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CENRIAMQVEAVADSLCVTECSS*CSLCTG Trigger: ACCTGTACACAGGCTACACCACGAGGAACATTCTGT...CACACACAGGCTGTCAGCCACGGCTTCCACTTGCATGGCTATTCTATTTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTGCAATTCAGATTCCAAGATGATAGAAGATCAATTTGTGTGGATCGAGGTGTTGCTCCATGGTaGAGGTGGAGTACAGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSLQFRFQDDRRSICVDRGVAPW*RWSTAP Trigger: CGGCGCTGTACTCCACCTCCACCATGGAGCAACACC...TCGATCCACACAAATTGATCTTCTATCATCTTGGAATCTGAATTGCAGGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACCAGAGGCTCTGTGGGTaGGAGGATCTGCGTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHQRLCG*EDLRQG Trigger: ACCTTGACGCAGATCCTCCCACCCACAGAGCCTCTG...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTCCCATTCAGCAGAGGCTCTGTaGGTGGGAGGATCTGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTYKKVTCKLHNKGRVSHSAEAL*VGGSAS Trigger: TGACGCAGATCCTCCCACCCACAGAGCCTCTGCTGA...ATGGGACACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 72 bp | AAGCTAAGCTCATTGAAAGGCCGGGTCTCTAAGGCGTaGTGCAGCAGAAGGCAGGCTGTGCTAATATATCTA | + |
|
Preference number: 4 (lower is better) Translates to: KLSSLKGRVSKA*CSRRQAVLIYL Trigger: TAGATATATTAGCACAGCCTGCCTTCTGCTGCACAACGCCTTAGAGACCCGGCCTTTCAATGAGCTTAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| 3UTR CAA 72 bp | CGTAGGCATCGGGAATGTTCAAGACTTCGCCTGTTCTaGCCACTTGACCAGCAATCCCTTTCTCAATGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRHRECSRLRLF*PLDQQSLSQWK Trigger: TTTCCATTGAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGCGAAGTCTTGAACATTCCCGATGCCTACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCCATTATGGGAGAATATCTCAGCGATCCGTCGGGCCAGCACTGGTCACCACACAGGCTATTATTaGACTCTCCAAGGAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: FLPLWENISAIRRASTGHHTGYY*TLQGST Trigger: TGTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTG...GTGACCAGTGCTGGCCCGACGGATCGCTGAGATATTCTCCCATAATGGCAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCGGCAGAAGGCCTCTTTaGCCCAGTGCCTGTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KEHTCSAPVINSLDFSVTGRRPL*PSACTV Trigger: AACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCC...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGGCAGAAGGCCTCTTTaGCCCAGTGCCTGTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFSLYKGIGAVAEGYSEGRRPL*PSACTV Trigger: AACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCC...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACATGATCTCCAGCACCTaGTCGTACTCGCTGGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHMISST*SYSLEL Trigger: GAGCTCCAGCGAGTACGAGCAGGTGCTGGAGATCAT...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCTGTGGAGAAAGCTCTTTTCCACAGTCTCTaGACTAACACTTTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: WVWMAADLFCYCVPVEKALFHSL*TNTFRN Trigger: GTTTCTGAAAGTGTTAGTGCAGAGACTGTGGAAAAG...AGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGAGTGGTGTTGCTCCATaGTGGAGGTGGAGTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVSGVAP*WRWSTA Trigger: CGCTGTACTCCACCTCCACCATGGAGCAACACCACT...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGAGGATGGACACCGTCTaGGAGAAGTGGTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVRMDTV*EKWCCS Trigger: GGAGCAACACCACTTCTCCCAGACGGTGTCCATCCT...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTGCAATTCAGATTCCAAGATGATAGAAGATCAATTTGTGTGGATCGACCTGCTCGTACTCGCTaGAGCTCAGGGTGGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLQFRFQDDRRSICVDRPARTR*SSGWRR Trigger: TCTTCTCCACCCTGAGCTCCAGCGAGTACGAGCAGG...TCGATCCACACAAATTGATCTTCTATCATCTTGGAATCTGAATTGCAGGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTACCTGTAGATGCATTCTaGGTGGCGGATCCTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CGRKLNRLCKCQAPVCMVPVDAF*VADPVV Trigger: TACCACAGGATCCGCCACTCAGAATGCATCTACAGG...TACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGGCAGAAGGCCTCTTTaGCCCAGTGCCTGTACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTGRRPL*PSACTV Trigger: AACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCC...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTAGTGTGCCACCGTGACTaGATGCTTCCAGTTGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CGRKLNRLCKCQAPVCMVVCHRD*MLPVVV Trigger: TACCACAACTGGAAGCATGCAGTCACGGTGGCACAC...TACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTCCCATGGCATACATGCAGTGTaGCACCGTGACTGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LTYKKVTCKLHNKGRVSHGIHAV*HRDCML Trigger: AAGCATGCAGTCACGGTGGCACACTGCATGTATGCC...ATGGGACACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAAGCTCCTTGTTCTTGTaGTCCACCTGGAAGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTSSLFL*STWKSA Trigger: CGCGCTCTTCCAGGTGGACCACAAGAACAAGGAGCT...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCTTACTGAAGCCCCTGTaGTCCAGGTCATGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEHTCSAPVINSLDFSVTLLKPL*SRSWHR Trigger: TCTGTGCCATGACCTGGACCACAGGGGCTTCAGTAA...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGTTACTGAAGCCCCTGTaGTCCAGGTCATGGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSLYKGIGAVAEGYSELLKPL*SRSWHR Trigger: TCTGTGCCATGACCTGGACCACAGGGGCTTCAGTAA...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTAGGATGGACACCGTCTaGGAGAAGTGGTGTTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MPYFYFLCIKGLAQLPKARMDTV*EKWCCS Trigger: GGAGCAACACCACTTCTCCCAGACGGTGTCCATCCT...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CACACAAAGCAAATGCAGGGTAGGAATATACAGAGAAGAGACTTTCAAAACCAATCAGCAGAGGCTCTGTaGGTGGGAGGATCTGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HTKQMQGRNIQRRDFQNQSAEAL*VGGSAS Trigger: TGACGCAGATCCTCCCACCCACAGAGCCTCTGCTGA...TTGGTTTTGAAAGTCTCTTCTCTGTATATTCCTACCCTGCATTTGCTTTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| 3UTR CAA 72 bp | AAGACAGCAAACATCTTGAAGTTGTTCTCGTCTGTCTaGGAGAAGGCGCTACCGCTGATCTTGTTCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: KTANILKLFSSV*EKALPLILFTI Trigger: GATGGTGAACAAGATCAGCGGTAGCGCCTTCTCCAAGACAGACGAGAACAACTTCAAGATGTTTGCTGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTTCTCCTTGGTCTTCTTaGAGATGGGCTTCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MPYFYFLCIKGLAQLPKASPWSS*RWASPP Trigger: AGGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGA...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ATCATTTATAGTCACTGTTCTAGATACAGCAGAAGACCGGGGGATCGGGGTGACAGGCCATTGTTGTTTTaGAGTATGGCATACATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IIYSHCSRYSRRPGDRGDRPLLF*SMAYMQ Trigger: CTGCATGTATGCCATACTTCAAAACAACAATGGCCT...GTCACCCCGATCCCCCGGTCTTCTGCTGTATCTAGAACAGTGACTATAAATGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR TCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACTGCGCTCGAGGTCTGTaGAGAGGCCATTGTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHCARGL*RGHCCF Trigger: AAAACAACAATGGCCTCTTCACAGACCTCGAGCGCA...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCTGCAATTCAGATTCCAAGATGATAGAAGATCAATTTGTGTGGATCGATCATCCCGGGTGGTATaGACACACACAGGCTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SSLQFRFQDDRRSICVDRSSRVV*THTGSI Trigger: GATAGAGCCTGTGTGTGTTCATACCACCCGGGATGA...TCGATCCACACAAATTGATCTTCTATCATCTTGGAATCTGAATTGCAGGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR GCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGAAAGAACAGACTGGATaGGGGTTCCTGATTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVKEQTG*GFLIPG Trigger: GCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTT...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAGCAAGATTGGCTGTTaGAACCTCCTGATGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHSKIGC*NLLMAE Trigger: CTCAGCCATCAGGAGGTTGCAACAGCCAATCTTGCT...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACACCTCGGAGGTGCAGATaGTGTGGTAGGAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTPRRCR*CGRKAS Trigger: AGAAGCTTTCCTACCACAGCATCTGCACCTCCGAGG...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGGGCATACATGCAGTGTaGCACCGTGACTGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGGIHAV*HRDCML Trigger: AAGCATGCAGTCACGGTGGCACACTGCATGTATGCC...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACTGCCTCGGCTCACTATaGGCATACACAGAATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHCLGSL*AYTECS Trigger: GGAACATTCTGTGTATGCCCATAGTGAGCCGAGGCA...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GATCAATACTTCACACTGGTATTGGCACTTACATATCCAAGAACATTTTCTCAGTCAGCAGAGGCTCTGTaGGTGGGAGGATCTGCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DQYFTLVLALTYPRTFSQSAEAL*VGGSAS Trigger: TGACGCAGATCCTCCCACCCACAGAGCCTCTGCTGA...CTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGATTACCTTCTCCCACTaGTTGAGGTTATCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVITFSH*LRLSLQ Trigger: CTGCAGGGATAACCTCAATCAGTGGGAGAAGGTAAT...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCATTACCTTCTCCCACTaGTTGAGGTTATCCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KEHTCSAPVINSLDFSVTITFSH*LRLSLQ Trigger: CTGCAGGGATAACCTCAATCAGTGGGAGAAGGTAAT...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCCTGCAATTCAGATTCCAAGATGATAGAAGATCAATTTGTGTGGATCGATATCCTGGTACCTGCTaGCTTCCTTGGGAGATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLQFRFQDDRRSICVDRYPGTC*LPWEMV Trigger: AACCATCTCCCAAGGAAGTCAGCAGGTACCAGGATA...TCGATCCACACAAATTGATCTTCTATCATCTTGGAATCTGAATTGCAGGGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR GCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTAAAGAACAGACTGGATaGGGGTTCCTGATTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: MPYFYFLCIKGLAQLPKAKEQTG*GFLIPG Trigger: GCCTGGAATCAGGAACCCGCATCCAGTCTGTTCTTT...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTTTCCTTCATCCCGGGTaGTATGAACACACACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MPYFYFLCIKGLAQLPKAFLHPG*YEHTQA Trigger: AGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAA...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTAAAGCCCAAGCAAGATTaGCTGTTGCAACCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CGRKLNRLCKCQAPVCMVKPKQD*LLQPPD Trigger: ATCAGGAGGTTGCAACAGCCAATCTTGCTTGGGCTT...TACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCAAGCCCAAGCAAGATTaGCTGTTGCAACCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KEHTCSAPVINSLDFSVTKPKQD*LLQPPD Trigger: ATCAGGAGGTTGCAACAGCCAATCTTGCTTGGGCTT...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGAACAACCGAACCGGGATTCTCTGGTCTCCATGCTATCCTGAAAATCCCCCAAGTAGAGAGTCTATaGCAACTATGTTATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRTTEPGFSGLHAILKIPQVESL*QLCYQS Trigger: ACTTTGATAACATAGTTGCCATAGACTCTCTACTTG...GGGGATTTTCAGGATAGCATGGAGACCAGAGAATCCCGGTTCGGTTGTTCTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGACAGAATGTTCCTCGTaGTGTAGCCTGTGTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVTECSS*CSLCTG Trigger: ACCTGTACACAGGCTACACCACGAGGAACATTCTGT...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 72 bp | ATCGGGAATGTTCAAGACTTCGCCTGTTCTTGCCACTaGACCAGCAATCCCTTTCTCAATGGAAAATCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IGNVQDFACSCH*TSNPFLNGKSD Trigger: ATCAGATTTTCCATTGAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGCGAAGTCTTGAACATTCCCGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTTCATCCCGGGTGGTATaGACACACACAGGCTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: MPYFYFLCIKGLAQLPKASSRVV*THTGYY Trigger: ATAATAGCCTGTGTGTGTTCATACCACCCGGGATGA...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AGTGCACTGATGGGAGAACACACTCATGATAATTTCCTTATGGAGAGCTACCTGTACATCTCCTCCAACTaGTTCCTGTTCCCAAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SALMGEHTHDNFLMESYLYISSN*FLFPKY Trigger: ATACTTTGGGAACAGGAAGCAGTTGGAGGAGATGTA...CAGGTAGCTCTCCATAAGGAAATTATCATGAGTGTGTTCTCCCATCAGTGCACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGTCTCGTACACGACTCCCTaGATATTCGTATCCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GQIQGDFCKIPTSTAKTVSYTTP*IFVSWY Trigger: GTACCAGGATACGAATATGCAGGGAGTCGTGTACGA...GACTGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGAAGCCCAAGCAAGATTaGCTGTTGCAACCTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGKPKQD*LLQPPD Trigger: ATCAGGAGGTTGCAACAGCCAATCTTGCTTGGGCTT...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAACAGAATGTTCCTCGTaGTGTAGCCTGTGTACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTTECSS*CSLCTG Trigger: ACCTGTACACAGGCTACACCACGAGGAACATTCTGT...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTGGTATAGCAGGGAATaGCCACAGCATTGTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVWYSRE*PQHCRI Trigger: GATTCTACAATGCTGTGGCCATTCCCTGCTATACCA...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATTGTGGTATAGCAGGGAATaGCCACAGCATTGTAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GRKLNRLCKCQAPVCMVLWYSRE*PQHCRI Trigger: GATTCTACAATGCTGTGGCCATTCCCTGCTATACCA...CAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGCACACAGGCTATTATTaGACTCTCCAAGGAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LLFSLYKGIGAVAEGYSEHTGYY*TLQGST Trigger: TGTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTG...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | GGGGATTTATTTCACATTAGAGATAAAACGGGCAAATGTATATATAGTACCTGGGGATCTGCGTCAAGGTaGTATAGCAGGGAATGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDLFHIRDKTGKCIYSTWGSASR*YSREWP Trigger: TGGCCATTCCCTGCTATACCACCTTGACGCAGATCC...CCAGGTACTATATATACATTTGCCCGTTTTATCTCTAATGTGAAATAAATCCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| 3UTR CAA 72 bp | ATATCATTCGCTGTCAATTTTGTAACTGGCCATAGTTaGGTCACAGAGCAAAGATCACAGGCAGTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: ISFAVNFVTGHS*VTEQRSQAVII Trigger: GATGATGACTGCCTGTGATCTTTGCTCTGTGACCAAACTATGGCCAGTTACAAAATTGACAGCGAATGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR TCA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGAGACAGCAAACATCTTaGAGTTGTTCTCGTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGRQQTS*SCSRLS Trigger: AGACAGACGAGAACAACTTCAAGATGTTTGCTGTCT...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CACACAAAGCAAATGCAGGGTAGGAATATACAGAGAAGAGACTTTCAAAACCAATCCAAGGAAGTACAGTaGAAATCCGTCGGCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HTKQMQGRNIQRRDFQNQSKEVQ*KSVGFC Trigger: ACAAAAGCCGACGGATTTGCACTGTACTTCCTTGGA...TTGGTTTTGAAAGTCTCTTCTCTGTATATTCCTACCCTGCATTTGCTTTGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR GCA 90 bp | TTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTCCCATCTCAGCCCAGAATTCTaGATATATATCATTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTYKKVTCKLHNKGRVSHLSPEF*IYIIRC Trigger: ACAGCGAATGATATATATGCAGAATTCTGGGCTGAG...ATGGGACACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGCTCAGCCCAGAATTCTaGATATATATCATTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLFSLYKGIGAVAEGYSELSPEF*IYIIRC Trigger: ACAGCGAATGATATATATGCAGAATTCTGGGCTGAG...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCCTTTTCCACAGTCTCTaGACTAACACTTTCAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KEHTCSAPVINSLDFSVTLFHSL*TNTFRN Trigger: GTTTCTGAAAGTGTTAGTGCAGAGACTGTGGAAAAG...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACTGTTGTTTTGAAGTATaGCATACATGCAGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHCCFEV*HTCSVP Trigger: TGGCACACTGCATGTATGCCATACTTCAAAACAACA...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATGTTGTTTTGAAGTATaGCATACATGCAGTGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CGRKLNRLCKCQAPVCMVCCFEV*HTCSVP Trigger: TGGCACACTGCATGTATGCCATACTTCAAAACAACA...TACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| 3UTR CAA 72 bp | AGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATaGGGTGTATCAAAATCTATCCCAAAGATTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLCKCQAPVCMV*GVSKSIPKIHL Trigger: AAGATGAATCTTTGGGATAGATTTTGATACACCCAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| 3UTR CAA 72 bp | TATTTTGCTGCCCGGGATCAATACTTCACACTGGTATaGGCACTTACATATCCAAGAACATTTTCTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YFAARDQYFTLV*ALTYPRTFSQK Trigger: TTTCTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATCCCGGGCAGCAAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000149440.8 |
||
| CDS-3UTR GCA 90 bp | GATCAATACTTCACACTGGTATTGGCACTTACATATCCAAGAACATTTTCTCAGCTCAGCCCAGAATTCTaGATATATATCATTCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DQYFTLVLALTYPRTFSQLSPEF*IYIIRC Trigger: ACAGCGAATGATATATATGCAGAATTCTGGGCTGAG...CTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CCA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCAAGTAGAGAGTCTATaGCAACTATGTTATCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGQVESL*QLCYQS Trigger: ACTTTGATAACATAGTTGCCATAGACTCTCTACTTG...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS GCA 90 bp | CTTGGCCACGTAGGCAGAGATGGTGGTACCCTGGGTGATGGGCCCTaGAGGGATGAGCCGGGGTTGGCCTTCCTTCATCCCGGGTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: LGHVGRDGGTLGDGP*RDEPGLAFLHPGWY Trigger: ATACCACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAGGGTACCACCATCTCTGCCTACGTGGCCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||
| CDS GCA 90 bp | CGGTGCCTTCTGTGGAGTCATTGCTCATCTGCCCCCGAGAGTCTGTaGGGTTTCGAAGTGCCAATAGAGCGGGGCCCTTGCTCCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: RCLLWSHCSSAPESL*GFEVPIERGPCSHL Trigger: AAGGTGGGAGCAAGGGCCCCGCTCTATTGGCACTTCGAAACCGCACAGACTCTCGGGGGCAGATGAGCAATGACTCCACAGAAGGCACCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS CCA 90 bp | ATGGTGGTACCCTGGGTGATGGGCCCTGCAGGGATGAGCCGGGGTTaGCCTTCCTTCATCCCGGGTGGTATGAACACACACAGGCTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: MVVPWVMGPAGMSRG*PSFIPGGMNTHRLY Trigger: ATAGAGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAGGGTACCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGAGGCAGAAGGCCTCTTaGCCCCAGTGCCTGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLRQKAS*PQCLYS Trigger: ACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCCT...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGAGGCAGAAGGCCTCTTaGCCCCAGTGCCTGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: WEDAGKNLSCGLCPLQTVRQKAS*PQCLYS Trigger: ACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCCT...CACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGGCGCTACCGCTGATCTaGTTCACCATCTGCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRALPLI*FTICTT Trigger: CGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGC...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGGCGCTACCGCTGATCTaGTTCACCATCTGCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: QGTGHTLMGGCRQEPLLWALPLI*FTICTT Trigger: CGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGC...CCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTGCGCTACCGCTGATCTaGTTCACCATCTGCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLALPLI*FTICTT Trigger: CGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGC...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTATGCGTGCTGGTAGGTaGAAGCGCATGAGGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLMRAGR*KRMRPC Trigger: GCAAGGCCTCATGCGCTTCAACCTACCAGCACGCAT...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAATGCGTGCTGGTAGGTaGAAGCGCATGAGGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: APSRQCSAGLGANSIRRSMRAGR*KRMRPC Trigger: GCAAGGCCTCATGCGCTTCAACCTACCAGCACGCAT...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTATGCGTGCTGGTAGGTaGAAGCGCATGAGGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRMRAGR*KRMRPC Trigger: GCAAGGCCTCATGCGCTTCAACCTACCAGCACGCAT...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCTGGGAGAAGTGGTGTaGCTCCATGGTGGAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LPPPDSAVLAWEQIAFGGLGEVV*LHGGGG Trigger: TCCACCTCCACCATGGAGCAACACCACTTCTCCCAG...ACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGGCGGCCTGAAATCCACATaGCTGTCTCTTCCCCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: QARTSPVVSAPSRQCSAGGLKST*LSLPRE Trigger: TTCGCGGGGAAGAGACAGCAATGTGGATTTCAGGCC...GCCAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGCCTTCTGTGGAGTCATaGCTCATCTGCCCCCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRPSVES*LICPRE Trigger: CTCTCGGGGGCAGATGAGCAATGACTCCACAGAAGG...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS CCA 90 bp | ATGGTGGTACCCTGGGTGATGGGCCCTGCAGGGATGAGCCGGGGTTaGCCTTCCTTCATCCCGGGTGGTATGAACACACACAGGCTATTA | + |
|
Preference number: 5 (lower is better) Translates to: MVVPWVMGPAGMSRG*PSFIPGGMNTHRLL Trigger: TAATAGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAGGGTACCACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||
| CDS-3UTR CAA 90 bp | GGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTAGGCAGAAGGCCTCTTaGCCCCAGTGCCTGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GTGHTLMGGCRQEPLLWSRQKAS*PQCLYS Trigger: ACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCCT...AGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCATCCGAGTACAGCTCCTaGTTCTTGTGGTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: APSRQCSAGLGANSIRRSSEYSS*FLWSTW Trigger: CCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGA...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTCTGGGAGAAGTGGTGTaGCTCCATGGTGGAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSLGEVV*LHGGGG Trigger: TCCACCTCCACCATGGAGCAACACCACTTCTCCCAG...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGCTGGGAGAAGTGGTGTaGCTCCATGGTGGAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLLGEVV*LHGGGG Trigger: TCCACCTCCACCATGGAGCAACACCACTTCTCCCAG...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGTCCGAGTACAGCTCCTaGTTCTTGTGGTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMSEYSS*FLWSTW Trigger: CCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGA...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCCGAGTACAGCTCCTaGTTCTTGTGGTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPSEYSS*FLWSTW Trigger: CCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGA...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTGCCTGTTCTTGCCACTaGACCAGCAATCCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPPPDSAVLAWEQIAFGGACSCH*TSNPFL Trigger: GAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGC...ACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCGCCTGTTCTTGCCACTaGACCAGCAATCCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFACSCH*TSNPFL Trigger: GAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGC...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGGCCTGTTCTTGCCACTaGACCAGCAATCCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAVLAWEQIAFGGQVEPRACSCH*TSNPFL Trigger: GAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGC...CCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTATGCGTGCTGGTAGGTaGAAGCGCATGAGGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLMRAGR*KRMRPC Trigger: GCAAGGCCTCATGCGCTTCAACCTACCAGCACGCAT...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTGGCCTGAAATCCACATaGCTGTCTCTTCCCCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: RCLGCTLCPLDEGRGMLPGLKST*LSLPRE Trigger: TTCGCGGGGAAGAGACAGCAATGTGGATTTCAGGCC...AGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCGGCCTGAAATCCACATaGCTGTCTCTTCCCCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: ELATPSWEDAGKNLSCGLGLKST*LSLPRE Trigger: TTCGCGGGGAAGAGACAGCAATGTGGATTTCAGGCC...GAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGCGGAAGCAACTCGCATaGTTAGAGGGTCCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGTGHTLMGGCRQEPLLWRKQLA*LEGPSS Trigger: GGAAGATGGACCCTCTAACAATGCGAGTTGCTTCCG...CCACAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS CCA 90 bp | GGGCCCTGCAGGGATGAGCCGGGGTTGGCCTTCCTTCATCCCGGGTaGTATGAACACACACAGGCTATTATTGCACTCTCCAAGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GPCRDEPGLAFLHPG*YEHTQAIIALSKEV Trigger: TACTTCCTTGGAGAGTGCAATAATAGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||
| CDS-3UTR CAA 90 bp | AACCAGGGAACTGGCCACACCCTCATGGGAGGATGCAGGCAAGAACCTCTCCTGATCTCCTTGGTCTTCTaGAAGATGGGCTTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NQGTGHTLMGGCRQEPLLISLVF*KMGFPS Trigger: GGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGAT...CAGGAGAGGTTCTTGCCTGCATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCAGCATGGCACAGAACCAGGGAACTGGCCACACCCTCATGGGAGGATGGCCTGTTCTTGCCACTaGACCAGCAATCCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQQHGTEPGNWPHPHGRMACSCH*TSNPFL Trigger: GAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGC...CATCCTCCCATGAGGGTGTGGCCAGTTCCCTGGTTCTGTGCCATGCTGCTGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTCTGAGTGCGCTACCGCTGATCTaGTTCACCATCTGCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: WDVPCVPWMRAEVCFLLSALPLI*FTICTT Trigger: CGTGGTGCAGATGGTGAACAAGATCAGCGGTAGCGC...ACTCAGAAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TCGAGTCAGCCTGACACTTTGCAACAGGGGGAGTCTGTGACTGATGGAGAGTCAAGGCAGAAGGCCTCTTaGCCCCAGTGCCTGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SSQPDTLQQGESVTDGESRQKAS*PQCLYS Trigger: ACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCCT...TGACTCTCCATCAGTCACAGACTCCCCCTGTTGCAAAGTGTCAGGCTGACTCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR CAA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTATCTCCTTGGTCTTCTaGAAGATGGGCTTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLISLVF*KMGFPS Trigger: GGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGAT...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGACACACAGGCTATTATaGCACTCTCCAAGGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLTHRLL*HSPRKY Trigger: GTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTGT...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCACACACAGGCTATTATaGCACTCTCCAAGGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFTHRLL*HSPRKY Trigger: GTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTGT...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CCCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTGAAAATCTGATCTCCTaGGTCTTCTTGAAGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRCLGCTLCPLDEGRGMLENLIS*VFLKMG Trigger: GCCCATCTTCAAGAAGACCAAGGAGATCAGATTTTC...AAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CCCGATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCGCAAACATCTTGAAGTaGTTCTCGTCTGTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PDAWDVPCVPWMRAEVCFANILK*FSSVLE Trigger: CTCCAAGACAGACGAGAACAACTTCAAGATGTTTGC...GAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCCCTGCTCCAGCAGGTGTTGGCCAGCAAGGAGGTTGTCCCTATGGCCTCTGGTTCATCTTTTGCTTaGTTGGTTTTCCTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VPLLQQVLASKEVVPMASGSSFA*LVFLFS Trigger: GCTGAAGAGGAAAACCAACAAAGCAAAAGATGAACC...AGAGGCCATAGGGACAACCTCCTTGCTGGCCAACACCTGCTGGAGCAGGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGGATGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGAAAATCTGATCTCCTaGGTCTTCTTGAAGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MGGCRQEPLLWSLPPPDSENLIS*VFLKMG Trigger: GCCCATCTTCAAGAAGACCAAGGAGATCAGATTTTC...ACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCATCCTCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCCTCCAGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAAAGACAGCAAACATCTaGAAGTTGTTCTCGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: APSRQCSAGLGANSIRRSKTANI*KLFSSV Trigger: GACAGACGAGAACAACTTCAAGATGTTTGCTGTCTT...TGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCTGGAGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTAAGACAGCAAACATCTaGAAGTTGTTCTCGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AWEQIAFGGQVEPRSSRRKTANI*KLFSSV Trigger: GACAGACGAGAACAACTTCAAGATGTTTGCTGTCTT...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGAAGACAGCAAACATCTaGAAGTTGTTCTCGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLKTANI*KLFSSV Trigger: GACAGACGAGAACAACTTCAAGATGTTTGCTGTCTT...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCGAGGCCATTGTTGTTTaGAAGTATGGCATACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQCSAGLGANSIRRSGGAEAIVV*KYGIHA Trigger: TGCATGTATGCCATACTTCAAAACAACAATGGCCTC...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCACGGAGTAGCCGACGTGAGATGGTTCATCTTTaGCTTTGTTGGTTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AWEQIAFGGQVEPRSSRREMVHL*LCWFSS Trigger: AGAGGAAAACCAACAAAGCAAAAGATGAACCATCTC...ACGTCGGCTACTCCGTGGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CAA 90 bp | TTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGGGGAGGGGAGGTACCTGCTGACTTCCTaGGGAGATGGTTCATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LYKGIGAVAEGYSEGEGRYLLTS*GDGSSF Trigger: AAAAGATGAACCATCTCCCAAGGAAGTCAGCAGGTA...CCTCCCCTCCCCCTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CAA 90 bp | TGCAGGCAAGAACCTCTCCTGTGGTCTCTGCCCCCTCCAGACAGTGCAGTGCTGTATCAAAGTATGTCTTaGATACGTCGAGTAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CRQEPLLWSLPPPDSAVLYQSMS*IRRVGS Trigger: ACTTCCTACTCGACGTATCAAAGACATACTTTGATA...CAGCACTGCACTGTCTGGAGGGGGCAGAGACCACAGGAGAGGTTCTTGCCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GATGCCTGGGATGTACCCTGTGTCCCCTGGATGAGGGCAGAGGTATGCTTCCTTAAGACAGCAAACATCTaGAAGTTGTTCTCGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DAWDVPCVPWMRAEVCFLKTANI*KLFSSV Trigger: GACAGACGAGAACAACTTCAAGATGTTTGCTGTCTT...AAGGAAGCATACCTCTGCCCTCATCCAGGGGACACAGGGTACATCCCAGGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGGGGGAGGGGAGGGAGGCCATTGTTGTTTaGAAGTATGGCATACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LYKGIGAVAEGYSEGEGREAIVV*KYGIHA Trigger: TGCATGTATGCCATACTTCAAAACAACAATGGCCTC...CCTCCCCTCCCCCTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CCTCTGAGGTGTCTTGGCTGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTGGTTCATCTTTTGCTTaGTTGGTTTTCCTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLRCLGWVWMAADLFCYCGSSFA*LVFLFS Trigger: GCTGAAGAGGAAAACCAACAAAGCAAAAGATGAACC...ACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCAGCCAAGACACCTCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR CAA 90 bp | AGACAGTGCAGTGCTGGCCTGGGAGCAAATAGCATTCGGAGGTCAGGTGGAGCCTATCAAAGTATGTCTTaGATACGTCGAGTAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RQCSAGLGANSIRRSGGAYQSMS*IRRVGS Trigger: ACTTCCTACTCGACGTATCAAAGACATACTTTGATA...GGCTCCACCTGACCTCCGAATGCTATTTGCTCCCAGGCCAGCACTGCACTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GTGAGAACAACCGAACCGGGATTCTCTGGTCTCCATGCTATCCTGAAAATCCCCGCAAACATCTTGAAGTaGTTCTCGTCTGTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VRTTEPGFSGLHAILKIPANILK*FSSVLE Trigger: CTCCAAGACAGACGAGAACAACTTCAAGATGTTTGC...GGGGATTTTCAGGATAGCATGGAGACCAGAGAATCCCGGTTCGGTTGTTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCAATAGAGCGGGGCCCTaGCTCCCACCTTTAAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: KEHTCSAPVINSLDFSVTNRAGP*LPPLSA Trigger: CGCACTTAAAGGTGGGAGCAAGGGCCCCGCTCTATT...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTAGGCAGAAGGCCTCTTaGCCCCAGTGCCTGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: MPYFYFLCIKGLAQLPKARQKAS*PQCLYS Trigger: ACTGTACAGGCACTGGGGCAAAGAGGCCTTCTGCCT...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CAATGCCAGGGTCCTTTTATACGCTTGGTGACAGAATCCATGCGCTCATGCCTTGAAAATCTGATCTCCTaGGTCTTCTTGAAGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QCQGPFIRLVTESMRSCLENLIS*VFLKMG Trigger: GCCCATCTTCAAGAAGACCAAGGAGATCAGATTTTC...AAGGCATGAGCGCATGGATTCTGTCACCAAGCGTATAAAAGGACCCTGGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTCTGGGAGAAGTGGTGTaGCTCCATGGTGGAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: MPYFYFLCIKGLAQLPKALGEVV*LHGGGG Trigger: TCCACCTCCACCATGGAGCAACACCACTTCTCCCAG...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TGGGTGTGGATGGCGGCGGACCTCTTTTGTTACTGTGTTCCTGTGGAGAAAGCTGAGATGGTTCATCTTTaGCTTTGTTGGTTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WVWMAADLFCYCVPVEKAEMVHL*LCWFSS Trigger: AGAGGAAAACCAACAAAGCAAAAGATGAACCATCTC...AGCTTTCTCCACAGGAACACAGTAACAAAAGAGGTCCGCCGCCATCCACACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS GCA 90 bp | TATGAACACACACAGGCTATTATTGCACTCTCCAAGGAAGTACAGTaGAAATCCGTCGGCTTTTGTGGCTATCCTGATGATGCTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YEHTQAIIALSKEVQ*KSVGFCGYPDDAAE Trigger: CTCAGCAGCATCATCAGGATAGCCACAAAAGCCGACGGATTTGCACTGTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTGTGTTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGATCTCCTTGGTCTTCTaGAAGATGGGCTTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVISLVF*KMGFPS Trigger: GGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGAT...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACATCTCCTTGGTCTTCTaGAAGATGGGCTTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHISLVF*KMGFPS Trigger: GGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGAT...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACAGTGAGATCTCCTTGGTCTTCTaGAAGATGGGCTTCCCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLFSLYKGIGAVAEGYSEISLVF*KMGFPS Trigger: GGAGGGGAAGCCCATCTTCAAGAAGACCAAGGAGAT...CTCACTGTAGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTATCTTCTCCTGCTCCTGCCAGAGTGCTGAGTGAGTGTTTCTGGTCAGTCAAGACAGCAAACATCTaGAAGTTGTTCTCGTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KVSSPAPARVLSECFWSVKTANI*KLFSSV Trigger: GACAGACGAGAACAACTTCAAGATGTTTGCTGTCTT...GACTGACCAGAAACACTCACTCAGCACTCTGGCAGGAGCAGGAGAAGATACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGTCGGCCTGAAATCCACATaGCTGTCTCTTCCCCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GQIQGDFCKIPTSTAKTVGLKST*LSLPRE Trigger: TTCGCGGGGAAGAGACAGCAATGTGGATTTCAGGCC...GACTGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATTGCGGAAGCAACTCGCATaGTTAGAGGGTCCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRKLNRLCKCQAPVCMVLRKQLA*LEGPSS Trigger: GGAAGATGGACCCTCTAACAATGCGAGTTGCTTCCG...CAATACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR CAA 90 bp | CACACAAAGCAAATGCAGGGTAGGAATATACAGAGAAGAGACTTTCAAAACCAATCCGAGTACAGCTCCTaGTTCTTGTGGTCCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HTKQMQGRNIQRRDFQNQSEYSS*FLWSTW Trigger: CCAGGTGGACCACAAGAACAAGGAGCTGTACTCGGA...TTGGTTTTGAAAGTCTCTTCTCTGTATATTCCTACCCTGCATTTGCTTTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAGCCTGTTCTTGCCACTaGACCAGCAATCCCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTACSCH*TSNPFL Trigger: GAGAAAGGGATTGCTGGTCAAGTGGCAAGAACAGGC...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GATCAATACTTCACACTGGTATTGGCACTTACATATCCAAGAACATTTTCTCAGGGCCTGAAATCCACATaGCTGTCTCTTCCCCGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: DQYFTLVLALTYPRTFSQGLKST*LSLPRE Trigger: TTCGCGGGGAAGAGACAGCAATGTGGATTTCAGGCC...CTGAGAAAATGTTCTTGGATATGTAAGTGCCAATACCAGTGTGAAGTATTGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACGAAAATCTGATCTCCTaGGTCTTCTTGAAGATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHENLIS*VFLKMG Trigger: GCCCATCTTCAAGAAGACCAAGGAGATCAGATTTTC...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGGCAAACATCTTGAAGTaGTTCTCGTCTGTCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVANILK*FSSVLE Trigger: CTCCAAGACAGACGAGAACAACTTCAAGATGTTTGC...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGAAGGAAACTGAATAGACTTTGCAAATGCCAAGCTCCTGTGTGTATGGTATACCTGCTGACTTCCTaGGGAGATGGTTCATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CGRKLNRLCKCQAPVCMVYLLTS*GDGSSF Trigger: AAAAGATGAACCATCTCCCAAGGAAGTCAGCAGGTA...TACCATACACACAGGAGCTTGGCATTTGCAAAGTCTATTCAGTTTCCTTCCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS-3UTR CAA 90 bp | TTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGTCCCATTACCTGCTGACTTCCTaGGGAGATGGTTCATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LTYKKVTCKLHNKGRVSHYLLTS*GDGSSF Trigger: AAAAGATGAACCATCTCCCAAGGAAGTCAGCAGGTA...ATGGGACACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAGGCCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACTACCTGCTGACTTCCTaGGGAGATGGTTCATCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: CPRPQTQLTYKKVTCKLHYLLTS*GDGSSF Trigger: AAAAGATGAACCATCTCCCAAGGAAGTCAGCAGGTA...GTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGGCCTGGGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CAA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGACACACAGGCTATTATaGCACTCTCCAAGGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGTHRLL*HSPRKY Trigger: GTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTGT...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTACACACAGGCTATTATaGCACTCTCCAAGGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: MPYFYFLCIKGLAQLPKATHRLL*HSPRKY Trigger: GTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTGT...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCAAATTCAAGGAGACTTCTGTAAAATCCCTACTTCTACAGCAAAAACAACACACAGGCTATTATaGCACTCTCCAAGGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: AGQIQGDFCKIPTSTAKTTHRLL*HSPRKY Trigger: GTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTGT...TGTTTTTGCTGTAGAAGTAGGGATTTTACAGAAGTCTCCTTGAATTTGCCCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | ACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGCGTGTGGAGGCCATTGTTGTTTaGAAGTATGGCATACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: TQLTYKKVTCKLHNKGRVEAIVV*KYGIHA Trigger: TGCATGTATGCCATACTTCAAAACAACAATGGCCTC...CACACGCCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCGAGGCCATTGTTGTTTaGAAGTATGGCATACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: KEHTCSAPVINSLDFSVTEAIVV*KYGIHA Trigger: TGCATGTATGCCATACTTCAAAACAACAATGGCCTC...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCGGTTCATCTTTTGCTTaGTTGGTTTTCCTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEHTCSAPVINSLDFSVTGSSFA*LVFLFS Trigger: GCTGAAGAGGAAAACCAACAAAGCAAAAGATGAACC...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CAA 90 bp | CCACAAACTCAGTTAACCTATAAGAAGGTCACATGTAAACTTCACAACAAGGGGGAGGCCATTGTTGTTTaGAAGTATGGCATACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: PQTQLTYKKVTCKLHNKGEAIVV*KYGIHA Trigger: TGCATGTATGCCATACTTCAAAACAACAATGGCCTC...CCCCTTGTTGTGAAGTTTACATGTGACCTTCTTATAGGTTAACTGAGTTTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTGGTTCATCTTTTGCTTaGTTGGTTTTCCTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MPYFYFLCIKGLAQLPKAGSSFA*LVFLFS Trigger: GCTGAAGAGGAAAACCAACAAAGCAAAAGATGAACC...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CAA 90 bp | AAAGAGCATACCTGTAGTGCACCTGTAATCAACAGTTTGGATTTCTCTGTCACCTATCAAAGTATGTCTTaGATACGTCGAGTAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KEHTCSAPVINSLDFSVTYQSMS*IRRVGS Trigger: ACTTCCTACTCGACGTATCAAAGACATACTTTGATA...GGTGACAGAGAAATCCAAACTGTTGATTACAGGTGCACTACAGGTATGCTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTGAGATGGTTCATCTTTaGCTTTGTTGGTTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MPYFYFLCIKGLAQLPKAEMVHL*LCWFSS Trigger: AGAGGAAAACCAACAAAGCAAAAGATGAACCATCTC...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCTTACTTTTATTTTCTTTGTATAAAGGGATTGGCGCAGTTGCCGAAGGCTTATCAAAGTATGTCTTaGATACGTCGAGTAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: MPYFYFLCIKGLAQLPKAYQSMS*IRRVGS Trigger: ACTTCCTACTCGACGTATCAAAGACATACTTTGATA...AGCCTTCGGCAACTGCGCCAATCCCTTTATACAAAGAAAATAAAAGTAAGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000089085.10 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 |
||
| CDS-3UTR CAA 90 bp | CACACAAAGCAAATGCAGGGTAGGAATATACAGAGAAGAGACTTTCAAAACCAATATCAAAGTATGTCTTaGATACGTCGAGTAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HTKQMQGRNIQRRDFQNQYQSMS*IRRVGS Trigger: ACTTCCTACTCGACGTATCAAAGACATACTTTGATA...TTGGTTTTGAAAGTCTCTTCTCTGTATATTCCTACCCTGCATTTGCTTTGTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089085.10 |
||
| CDS CCA 72 bp | CCCTGGGTGATGGGCCCTGCAGGGATGAGCCGGGGTTaGCCTTCCTTCATCCCGGGTGGTATGAACACACAC | + |
|
Preference number: 6 (lower is better) Translates to: PWVMGPAGMSRG*PSFIPGGMNTH Trigger: GTGTGTGTTCATACCACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||
| CDS CAA 90 bp | CCCCGAGAGTCTGTGCGGTTTCGAAGTGCCAATAGAGCGGGGCCCTaGCTCCCACCTTTAAGTGCGAATGGGAGGCAGCCTGGCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PRESVRFRSANRAGP*LPPLSANGRQPGSS Trigger: CGAGGAGCCAGGCTGCCTCCCATTCGCACTTAAAGGTGGGAGCAAGGGCCCCGCTCTATTGGCACTTCGAAACCGCACAGACTCTCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS CAA 72 bp | ACCCTGGGTGATGGGCCCTGCAGGGATGAGCCGGGGTaGGCCTTCCTTCATCCCGGGTGGTATGAACACACA | + |
|
Preference number: 6 (lower is better) Translates to: TLGDGPCRDEPG*AFLHPGWYEHT Trigger: TGTGTGTTCATACCACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115717.9 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||
| CDS CAA 90 bp | GATGGTGGTACCCTGGGTGATGGGCCCTGCAGGGATGAGCCGGGGTaGGCCTTCCTTCATCCCGGGTGGTATGAACACACACAGGCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: DGGTLGDGPCRDEPG*AFLHPGWYEHTQAL Trigger: TAGAGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAGGGTACCACCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115717.9 |
||
| CDS CAA 90 bp | GATGGTGGTACCCTGGGTGATGGGCCCTGCAGGGATGAGCCGGGGTaGGCCTTCCTTCATCCCGGGTGGTATGAACACACACAGGCTATT | + |
|
Preference number: 6 (lower is better) Translates to: DGGTLGDGPCRDEPG*AFLHPGWYEHTQAI Trigger: AATAGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCCTGCAGGGCCCATCACCCAGGGTACCACCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||
| CDS GCA 72 bp | GAGCCCACGGTGCCTTCTGTGGAGTCATTGCTCATCTaGCCCCGAGAGTCTGTGCGGTTTCGAAGTGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: EPTVPSVESLLI*PRESVRFRSAN Trigger: ATTGGCACTTCGAAACCGCACAGACTCTCGGGGGCAGATGAGCAATGACTCCACAGAAGGCACCGTGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS GCA 72 bp | AGGCCTTCACCTTTTCATCCGTCAAACCTGTTGCGTTaGAGGAGCCCACGGTGCCTTCTGTGGAGTCATTGC | + |
|
Preference number: 6 (lower is better) Translates to: RPSPFHPSNLLR*RSPRCLLWSHC Trigger: GCAATGACTCCACAGAAGGCACCGTGGGCTCCTGCAACGCAACAGGTTTGACGGATGAAAAGGTGAAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS CCA 72 bp | AGGGATGAGCCGGGGTTGGCCTTCCTTCATCCCGGGTaGTATGAACACACACAGGCTATTATTGCACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RDEPGLAFLHPG*YEHTQAIIALS Trigger: GGAGAGTGCAATAATAGCCTGTGTGTGTTCATACCACCCGGGATGAAGGAAGGCCAACCCCGGCTCATCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||
| CDS CAA 90 bp | GGGATGGAGAGAAAGATAGGCCTTCACCTTTTCATCCGTCAAACCTaGTGTGGTAGCAGAGGGGCTGGGAAAGCCGAAGCACAGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GMERKIGLHLFIRQT*CGSRGAGKAEAQLC Trigger: GCACAGCTGTGCTTCGGCTTTCCCAGCCCCTCTGCTACCACACAAGGTTTGACGGATGAAAAGGTGAAGGCCTATCTTTCTCTCCATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136160.2 |
||
| CDS TCA 72 bp | GATAGGCCTTCACCTTTTCATCCGTCAAACTGGGGCTaGGGAAACACTCGGTCAGCCTTCGGAAGCAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: DRPSPFHPSNWG*GNTRSAFGSNS Trigger: CGAGTTGCTTCCGAAGGCTGACCGAGTGTTTCCTCAGCCCCAGTTTGACGGATGAAAAGGTGAAGGCCTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000089085.10 ENSMUST00000115717.9 |
||
| CDS GCA 72 bp | AAGATAGGCCTTCACCTTTTCATCCGTCAAACCTGTTaGGTTGCAGGAGCCCACGGTGCCTTCTGTGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: KIGLHLFIRQTC*VAGAHGAFCGV Trigger: GACTCCACAGAAGGCACCGTGGGCTCCTGCAACGCAACAGGTTTGACGGATGAAAAGGTGAAGGCCTATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115724.9 |
||
| CDS CAA 72 bp | AGAAAGATAGGCCTTCACCTTTTCATCCGTCAAACCTaGTGTGGTAGCAGAGGGGCTGGGAAAGCCGAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RKIGLHLFIRQT*CGSRGAGKAEA Trigger: TGCTTCGGCTTTCCCAGCCCCTCTGCTACCACACAAGGTTTGACGGATGAAAAGGTGAAGGCCTATCTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136160.2 |
||
| CDS CAA 72 bp | TTCATCCCGGGTGGTATGAACACACACAGGCTATTATaGCACTCTCCAAGGAAGTACAGTGCAAATCCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: FIPGGMNTHRLL*HSPRKYSANPS Trigger: CGACGGATTTGCACTGTACTTCCTTGGAGAGTGCAATAATAGCCTGTGTGTGTTCATACCACCCGGGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||
| CDS GCA 72 bp | ACACAGGCTATTATTGCACTCTCCAAGGAAGTACAGTaGAAATCCGTCGGCTTTTGTGGCTATCCTGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: TQAIIALSKEVQ*KSVGFCGYPDD Trigger: ATCATCAGGATAGCCACAAAAGCCGACGGATTTGCACTGTACTTCCTTGGAGAGTGCAATAATAGCCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024647.13 ENSMUST00000089085.10 ENSMUST00000115715.8 ENSMUST00000115720.8 ENSMUST00000115724.9 ENSMUST00000149440.8 ENSMUST00000233052.2 |
||