Pregenerated sensors for PDCL2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029235

Ensembl transcript IDs: ENSMUST00000031145.7, ENSMUST00000122213.8

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 72 bp	GTTTCTGGAAACTTTCTTGCTAGGACACTCAGATGTTaGTTAACCACCAAGCACATTGGGACACTTGATCTA	+
Preference number: 6 (lower is better) Translates to: VSGNFLARTLRC*LTTKHIGTLDL Trigger: TAGATCAAGTGTCCCAATGTGCTTGGTGGTTAACCAACATCTGAGTGTCCTAGCAAGAAAGTTTCCAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031145.7 ENSMUST00000122213.8
CDS TCA 72 bp	CAGATGTTGGTTAACCACCAAGCACATTGGGACACTTaGTCTATAGAGATGAATTACAACCCACAGGTCTTT	+
Preference number: 6 (lower is better) Translates to: QMLVNHQAHWDT*SIEMNYNPQVF Trigger: AAAGACCTGTGGGTTGTAATTCATCTCTATAGATCAAGTGTCCCAATGTGCTTGGTGGTTAACCAACATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031145.7 ENSMUST00000122213.8
CDS CAA 72 bp	TGTTCAATGCAGCTATTCACGATGGCTTTAACAAATTaGGTTTCTGGAAACTTTCTTGCTAGGACACTCAGA	+
Preference number: 6 (lower is better) Translates to: CSMQLFTMALTN*VSGNFLARTLR Trigger: TCTGAGTGTCCTAGCAAGAAAGTTTCCAGAAACCAAATTTGTTAAAGCCATCGTGAATAGCTGCATTGAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031145.7 ENSMUST00000122213.8

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