Pregenerated sensors for PDCL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009030Ensembl transcript IDs: ENSMUST00000009174.15, ENSMUST00000112940.8, ENSMUST00000138314.4, ENSMUST00000147703.3
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTCATAGACAGCTTTTTGATCAGCCGCTCCATCTCCCGGCACTaGTCCTCCCTCTGCTCTGTCTCCAACTGCTTGAAGCGGCGCCAG | + |
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Preference number: 1 (lower is better) Translates to: QLIDSFLISRSISRH*SSLCSVSNCLKRRQ Trigger: CTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGAGCGGCTGATCAAAAAGCTGTCTATGAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR GCA 90 bp | CGCTCCATCTCCCGGCACTGCTCCTCCCTCTGCTCTGTCTCCAACTaGTTGAAGCGGCGCCAGTCATTGATCACACCTTTTGGACCTATA | + |
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Preference number: 1 (lower is better) Translates to: RSISRHCSSLCSVSN*LKRRQSLITPFGPI Trigger: TATAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR GCA 90 bp | AGCTTTTTGATCAGCCGCTCCATCTCCCGGCACTGCTCCTCCCTCTaGTCTGTCTCCAACTGCTTGAAGCGGCGCCAGTCATTGATCACA | + |
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Preference number: 1 (lower is better) Translates to: SFLISRSISRHCSSL*SVSNCLKRRQSLIT Trigger: TGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGAGCGGCTGATCAAAAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR TCA 90 bp | CAGGAAGAGATACTGATGAGCAGGAGTACAGAAAGATCCTCCCACTaGGGTTTTCAAGCTCCACACACACCAATGTCAGTCAATAAGATG | + |
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Preference number: 1 (lower is better) Translates to: QEEILMSRSTERSSH*GFQAPHTPMSVNKM Trigger: CATCTTATTGACTGACATTGGTGTGTGTGGAGCTTGAAAACCTCAGTGGGAGGATCTTTCTGTACTCCTGCTCATCAGTATCTCTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR GCA 90 bp | TCTGAGGTCATCAGAAGACAATTTTCAAGACATTGCCTGCAAGGGTaGCATGTCAATATTGACTGGAAACAGTATCAGAGATGTCACGCT | + |
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Preference number: 1 (lower is better) Translates to: SEVIRRQFSRHCLQG*HVNIDWKQYQRCHA Trigger: AGCGTGACATCTCTGATACTGTTTCCAGTCAATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGATGACCTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR CCA 90 bp | CAATTTTCAAGACATTGCCTGCAAGGGTGCCATGTCAATATTGACTaGAAACAGTATCAGAGATGTCACGCTAGAGAAGTAAACAGCTCA | + |
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Preference number: 1 (lower is better) Translates to: QFSRHCLQGCHVNID*KQYQRCHAREVNSS Trigger: TGAGCTGTTTACTTCTCTAGCGTGACATCTCTGATACTGTTTCCAGTCAATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR GCA 90 bp | GGTAGAATTCTGAGGTCATCAGAAGACAATTTTCAAGACATTGCCTaGAAGGGTGCCATGTCAATATTGACTGGAAACAGTATCAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: GRILRSSEDNFQDIA*KGAMSILTGNSIRD Trigger: ATCTCTGATACTGTTTCCAGTCAATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGATGACCTCAGAATTCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR CAA 90 bp | TCCTCCTCTTCATCCAGATGGGACCTGCAGCTCATAGACAGCTTTTaGATCAGCCGCTCCATCTCCCGGCACTGCTCCTCCCTCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSSSSRWDLQLIDSF*ISRSISRHCSSLCS Trigger: AGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGAGCGGCTGATCAAAAAGCTGTCTATGAGCTGCAGGTCCCATCTGGATGAAGAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR CAA 90 bp | TCCATCTCCCGGCACTGCTCCTCCCTCTGCTCTGTCTCCAACTGCTaGAAGCGGCGCCAGTCATTGATCACACCTTTTGGACCTATAATA | + |
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Preference number: 2 (lower is better) Translates to: SISRHCSSLCSVSNC*KRRQSLITPFGPII Trigger: TATTATAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR-3UTR GCA 90 bp | AACTTGCTTGAATTGGGGCCCTTTATGAAACTGCTGCCGCATCTCTTCCATCCTTCCATCTCCCGGCACTaGTCCTCCCTCTGCTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: NLLELGPFMKLLPHLFHPSISRH*SSLCSV Trigger: GACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGA...AGGATGGAAGAGATGCGGCAGCAGTTTCATAAAGGGCCCCAATTCAAGCAAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR CAA 90 bp | TCCTCCCTCTGCTCTGTCTCCAACTGCTTGAAGCGGCGCCAGTCATaGATCACACCTTTTGGACCTATAATAAGATCCTTTCTCCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: SSLCSVSNCLKRRQS*ITPFGPIIRSFLQK Trigger: TTTTTGGAGAAAGGATCTTATTATAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTTCACCACCGAGCTACATTCCCAACCTTGTATGGACCCTGGTAGAGACAGTGCCATGTCAATATTaGCTGGAAACAGTATCAGAG | + |
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Preference number: 2 (lower is better) Translates to: KSSPPSYIPNLVWTLVETVPCQY*LETVSE Trigger: CTCTGATACTGTTTCCAGTCAATATTGACATGGCAC...TGTCTCTACCAGGGTCCATACAAGGTTGGGAATGTAGCTCGGTGGTGAACTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTCCATCCTCTGCTTCCGATACTGCTGCAAAAACTCTTCATCATCCAAGTTGAGTCATCTTCCCACTaGTTTTCTCCTGGAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LFHPLLPILLQKLFIIQVESSSH*FSPGGP Trigger: AGGACCTCCAGGAGAAAATCAGTGGGAAGATGACTC...AACTTGGATGATGAAGAGTTTTTGCAGCAGTATCGGAAGCAGAGGATGGAAGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR-3UTR GCA 90 bp | AGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTCTATCTTGGGGCCATGTaGATAGTAAGAGTTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: RCLPPNMTAVSKNHPFLFYLGAM*IVRVHH Trigger: GTGGTGAACTCTTACTATGCACATGGCCCCAAGATA...GAACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR-3UTR GCA 90 bp | AACTTGCTTGAATTGGGGCCCTTTATGAAACTGCTGCCGCATCTCTTCCATCCTGGAATACAGTTCAGCTaGAAGAGTAGTAACCAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: NLLELGPFMKLLPHLFHPGIQFS*KSSNQA Trigger: TGCTTGGTTACTACTCTTGCAGCTGAACTGTATTCC...AGGATGGAAGAGATGCGGCAGCAGTTTCATAAAGGGCCCCAATTCAAGCAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR-3UTR TCA 90 bp | GCACTGTTTACATTGCACAGAACACACTCACTAGGGAATTCTACTCTCAGAACTCTCCAGCCCAAACAATaGGATAGCTACGGAACTAGA | + |
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Preference number: 2 (lower is better) Translates to: ALFTLHRTHSLGNSTLRTLQPKQ*DSYGTR Trigger: TCTAGTTCCGTAGCTATCTCATTGTTTGGGCTGGAG...AGTTCTGAGAGTAGAATTCCCTAGTGAGTGTGTTCTGTGCAATGTAAACAGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGATACTGATGAGCAGGAGTACAGAAAGATCCTCCCACTGAGGTTTTCAGAACTGGTAGAATTCTaGGGTCATCAGAAGACAATT | + |
|
Preference number: 2 (lower is better) Translates to: GRDTDEQEYRKILPLRFSELVEF*GHQKTI Trigger: AATTGTCTTCTGATGACCTCAGAATTCTACCAGTTC...TGAAAACCTCAGTGGGAGGATCTTTCTGTACTCCTGCTCATCAGTATCTCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR CAA 90 bp | CTCTGCTTCCGATACTGCTGCAAAAACTCTTCATCATCCAAGTTCTaGTCCTTTGTACCAAACTCCTTTAGAGTCATCTTCCCACTGATT | + |
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Preference number: 2 (lower is better) Translates to: LCFRYCCKNSSSSKF*SFVPNSFRVIFPLI Trigger: AATCAGTGGGAAGATGACTCTAAAGGAGTTTGGTACAAAGGACAAGAACTTGGATGATGAAGAGTTTTTGCAGCAGTATCGGAAGCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTCCCTGGGACGCCATCTTCATAAATATGAACCATGATAAGTGTGCTTTTCCAAAAACCAAGGACTaGGAATACAGTTCAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: FSPWDAIFINMNHDKCAFPKTKD*EYSSAA Trigger: TGCAGCTGAACTGTATTCCCAGTCCTTGGTTTTTGG...AAAAGCACACTTATCATGGTTCATATTTATGAAGATGGCGTCCCAGGGACTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR-3UTR TCA 90 bp | TTAAATCCAACAGACACTTTCAAGACTCATTTACAGTTAGTTTCTGAGCAACCAGTACAGCTATGCATCTaGTTGCAAGTAAACATGATT | + |
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Preference number: 2 (lower is better) Translates to: LNPTDTFKTHLQLVSEQPVQLCI*LQVNMI Trigger: AATCATGTTTACTTGCAATCAGATGCATAGCTGTAC...TGGTTGCTCAGAAACTAACTGTAAATGAGTCTTGAAAGTGTCTGTTGGATTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009174.15 |
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| 3UTR-3UTR TCA 90 bp | CCAACCACCAAGCATATTACAGTATATCTATCAGTGGAAATATCAACAGCTATTGTACAGCTATGCATCTaGTTGCAAGTAAACATGATT | + |
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Preference number: 2 (lower is better) Translates to: PTTKHITVYLSVEISTAIVQLCI*LQVNMI Trigger: AATCATGTTTACTTGCAATCAGATGCATAGCTGTAC...AATAGCTGTTGATATTTCCACTGATAGATATACTGTAATATGCTTGGTGGTTGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR GCA 72 bp | GACAGCTTTTTGATCAGCCGCTCCATCTCCCGGCACTaGTCCTCCCTCTGCTCTGTCTCCAACTGCTTGAAG | + |
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Preference number: 3 (lower is better) Translates to: DSFLISRSISRH*SSLCSVSNCLK Trigger: CTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGAGCGGCTGATCAAAAAGCTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR GCA 72 bp | CAGCAGTCAGCAAAAACCATCCTTTCCTGTTCATTATaGTGGACTGGACCACTGACCGCCACAGCAGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: QQSAKTILSCSL*WTGPLTATAEA Trigger: GGCCTCTGCTGTGGCGGTCAGTGGTCCAGTCCAGCATAATGAACAGGAAAGGATGGTTTTTGCTGACTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR GCA 72 bp | TTGACAGTGCTAGGAATCAGGTATCTTGGGGCCATGTaGATAGTAAGAGTTCACCACCGAGCTACATTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LTVLGIRYLGAM*IVRVHHRATFP Trigger: TGGGAATGTAGCTCGGTGGTGAACTCTTACTATGCACATGGCCCCAAGATACCTGATTCCTAGCACTGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR GCA 72 bp | TGCTGCCGCATCTCTTCCATCCTCTGCTTCCGATACTaGTGCAAAAACTCTTCATCATCCAAGTTCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: CCRISSILCFRY*CKNSSSSKFLS Trigger: GGACAAGAACTTGGATGATGAAGAGTTTTTGCAGCAGTATCGGAAGCAGAGGATGGAAGAGATGCGGCAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR TCA 72 bp | GGGATTTCAAAAACTTGCTTGAATTGGGGCCCTTTATaGAACTGCTGCCGCATCTCTTCCATCCTCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GISKTCLNWGPL*NCCRISSILCF Trigger: GAAGCAGAGGATGGAAGAGATGCGGCAGCAGTTTCATAAAGGGCCCCAATTCAAGCAAGTTTTTGAAATCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTCCCTGGGACGCCATCTTCATAAATATGAACCATGATAAGTGTGCTTTTAAGCGGCGCCAGTCATaGATCACACCTTTTGGACCT | + |
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Preference number: 3 (lower is better) Translates to: FSPWDAIFINMNHDKCAFKRRQS*ITPFGP Trigger: AGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTT...AAAAGCACACTTATCATGGTTCATATTTATGAAGATGGCGTCCCAGGGACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR GCA 72 bp | TTCAAGCTCCACACACACCAATGTCAGTCAATAAGATaGTTGCCTCCCAACATGACAGCAGTCAGCAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: FKLHTHQCQSIR*LPPNMTAVSKN Trigger: GTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCTTATTGACTGACATTGGTGTGTGTGGAGCTTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR-3UTR CAA 90 bp | AAGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTGGTGCCATGTCAATATaGACTGGAAACAGTATCAGA | + |
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Preference number: 3 (lower is better) Translates to: KMLASQHDSSQQKPSFPVGAMSI*TGNSIR Trigger: TCTGATACTGTTTCCAGTCAATATTGACATGGCACC...AACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR-3UTR CAA 90 bp | TCATGCAGCCATTCATGGCTTCAGTCCCTGGGACGCCATCTTCATAAATATGAACCAAGTTCTTGTCCTTaGTACCAAACTCCTTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: SCSHSWLQSLGRHLHKYEPSSCP*YQTPLE Trigger: CTCTAAAGGAGTTTGGTACAAAGGACAAGAACTTGG...TTCATATTTATGAAGATGGCGTCCCAGGGACTGAAGCCATGAATGGCTGCATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR CCA 72 bp | AGACATTGCCTGCAAGGGTGCCATGTCAATATTGACTaGAAACAGTATCAGAGATGTCACGCTAGAGAAGTA | + |
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Preference number: 3 (lower is better) Translates to: RHCLQGCHVNID*KQYQRCHAREV Trigger: TACTTCTCTAGCGTGACATCTCTGATACTGTTTCCAGTCAATATTGACATGGCACCCTTGCAGGCAATGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR-3UTR CAA 90 bp | GCACTGTTTACATTGCACAGAACACACTCACTAGGGAATTCTACTCTCAGAACTGGTGCCATGTCAATATaGACTGGAAACAGTATCAGA | + |
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Preference number: 3 (lower is better) Translates to: ALFTLHRTHSLGNSTLRTGAMSI*TGNSIR Trigger: TCTGATACTGTTTCCAGTCAATATTGACATGGCACC...AGTTCTGAGAGTAGAATTCCCTAGTGAGTGTGTTCTGTGCAATGTAAACAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR GCA 72 bp | ATCAGAAGACAATTTTCAAGACATTGCCTGCAAGGGTaGCATGTCAATATTGACTGGAAACAGTATCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: IRRQFSRHCLQG*HVNIDWKQYQR Trigger: TCTCTGATACTGTTTCCAGTCAATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR GCA 72 bp | AATTCTGAGGTCATCAGAAGACAATTTTCAAGACATTaGCTGCAAGGGTGCCATGTCAATATTGACTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: NSEVIRRQFSRH*LQGCHVNIDWK Trigger: TTTCCAGTCAATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGATGACCTCAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR GCA 90 bp | GGGCCCTTTATGAAACTGCTGCCGCATCTCTTCCATCCTCTGCTTCCGATACTGGGAGATGCCTTCGCCTaGCAGCTCAGCCTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GPFMKLLPHLFHPLLPILGDAFA*QLSLCR Trigger: CCTGCAGAGGCTGAGCTGGCAGGCGAAGGCATCTCC...CAGTATCGGAAGCAGAGGATGGAAGAGATGCGGCAGCAGTTTCATAAAGGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| 3UTR CAA 72 bp | TCATCCAGATGGGACCTGCAGCTCATAGACAGCTTTTaGATCAGCCGCTCCATCTCCCGGCACTGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSRWDLQLIDSF*ISRSISRHCSS Trigger: GGAGGAGCAGTGCCGGGAGATGGAGCGGCTGATCAAAAAGCTGTCTATGAGCTGCAGGTCCCATCTGGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| CDS-3UTR CCA 90 bp | AAGAGTTCACCACCGAGCTACATTCCCAACCTTGTATGGACCCTGGTAGAGACACGGCGGGGTACTCTGTaGCAAGGCAGATCATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KSSPPSYIPNLVWTLVETRRGTL*QGRSCS Trigger: GCTGCATGATCTGCCTTGCCACAGAGTACCCCGCCG...TGTCTCTACCAGGGTCCATACAAGGTTGGGAATGTAGCTCGGTGGTGAACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR GCA 90 bp | AAGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTGGAGATGCCTTCGCCTaGCAGCTCAGCCTCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KMLASQHDSSQQKPSFPVGDAFA*QLSLCR Trigger: CCTGCAGAGGCTGAGCTGGCAGGCGAAGGCATCTCC...AACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CCA 90 bp | AAGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTCGGCGGGGTACTCTGTaGCAAGGCAGATCATGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KMLASQHDSSQQKPSFPVRRGTL*QGRSCS Trigger: GCTGCATGATCTGCCTTGCCACAGAGTACCCCGCCG...AACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR TCA 90 bp | ACCGAGCTACATTCCCAACCTTGTATGGACCCTGGTAGAGACAGATCTAGAGAAAGCGGCGCCAGTCATTaGTCACACCTTTTGGACCTG | + |
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Preference number: 4 (lower is better) Translates to: TELHSQPCMDPGRDRSRESGASH*SHLLDL Trigger: CAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCT...TTCTCTAGATCTGTCTCTACCAGGGTCCATACAAGGTTGGGAATGTAGCTCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR TCA 90 bp | GGAAGAGATACTGATGAGCAGGAGTACAGAAAGATCCTCCCACTGAGGTTTTCACACCCGCCTTGTAGATaGGCAGAGCAGGAAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GRDTDEQEYRKILPLRFSHPPCR*AEQEGH Trigger: ATGCCCTTCCTGCTCTGCTCATCTACAAGGCGGGTG...TGAAAACCTCAGTGGGAGGATCTTTCTGTACTCCTGCTCATCAGTATCTCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR TCA 90 bp | AAGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTCACCCGCCTTGTAGATaGGCAGAGCAGGAAGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: KMLASQHDSSQQKPSFPVHPPCR*AEQEGH Trigger: ATGCCCTTCCTGCTCTGCTCATCTACAAGGCGGGTG...AACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR GCA 90 bp | AAGAGTTCACCACCGAGCTACATTCCCAACCTTGTATGGACCCTGGTAGAGACATGGCTGGTGCTCCCCTaGCTCTGTCTTTGTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: KSSPPSYIPNLVWTLVETWLVLP*LCLCLH Trigger: ATGAAGACAAAGACAGAGGCAGGGGAGCACCAGCCA...TGTCTCTACCAGGGTCCATACAAGGTTGGGAATGTAGCTCGGTGGTGAACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR GCA 90 bp | GCCTGCAAGGGTGCCATGTCAATATTGACTGGAAACAGTATCAGAGATGTCACGTGCTCTGTCTCCAACTaGTTGAAGCGGCGCCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: ACKGAMSILTGNSIRDVTCSVSN*LKRRQS Trigger: TGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCA...CGTGACATCTCTGATACTGTTTCCAGTCAATATTGACATGGCACCCTTGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CCA 90 bp | ACCGAGCTACATTCCCAACCTTGTATGGACCCTGGTAGAGACAGATCTAGAGAATCATGCAGCCATTCATaGCTTCAGTCCCTGGGACGC | + |
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Preference number: 4 (lower is better) Translates to: TELHSQPCMDPGRDRSRESCSHS*LQSLGR Trigger: GCGTCCCAGGGACTGAAGCCATGAATGGCTGCATGA...TTCTCTAGATCTGTCTCTACCAGGGTCCATACAAGGTTGGGAATGTAGCTCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR TCA 90 bp | AAGAGTTCACCACCGAGCTACATTCCCAACCTTGTATGGACCCTGGTAGAGACAAATTGGGGCCCTTTATaGAACTGCTGCCGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSSPPSYIPNLVWTLVETNWGPL*NCCRIS Trigger: AGAGATGCGGCAGCAGTTTCATAAAGGGCCCCAATT...TGTCTCTACCAGGGTCCATACAAGGTTGGGAATGTAGCTCGGTGGTGAACTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR TCA 90 bp | AGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTCCCCCCAGCTGGTCAGTaGCTCGAACAAAATTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RCLPPNMTAVSKNHPFLFPPAGQ*LEQNCQ Trigger: TTGGCAATTTTGTTCGAGTCACTGACCAGCTGGGGG...GAACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTTCGCTGTCTTCACTGTaGCAGGTGGCAGAGTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KMLASQHDSSQQKPSFPVSLSSL*QVAEFR Trigger: GCGAAACTCTGCCACCTGTCACAGTGAAGACAGCGA...AACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGATACTGATGAGCAGGAGTACAGAAAGATCCTCCCACTGAGGTTTTCATGCCAGCTCAGCCTCTaGAGGTGTGGAACTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRDTDEQEYRKILPLRFSCQLSL*RCGTNG Trigger: GCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCA...TGAAAACCTCAGTGGGAGGATCTTTCTGTACTCCTGCTCATCAGTATCTCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GTCATCAGAAGACAATTTTCAAGACATTGCCTGCAAGGGTGCCATGTCAATATTGGAGATGCCTTCGCCTaGCAGCTCAGCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIRRQFSRHCLQGCHVNIGDAFA*QLSLCR Trigger: CCTGCAGAGGCTGAGCTGGCAGGCGAAGGCATCTCC...AATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GGAAATGCACTGTTTACATTGCACAGAACACACTCACTAGGGAATTCTACTCTCTCCATCTCCCGGCACTaGTCCTCCCTCTGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GNALFTLHRTHSLGNSTLSISRH*SSLCSV Trigger: GACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGA...GAGAGTAGAATTCCCTAGTGAGTGTGTTCTGTGCAATGTAAACAGTGCATTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGATACTGATGAGCAGGAGTACAGAAAGATCCTCCCACTGAGGTTTTCACCCCCAGCTGGTCAGTaGCTCGAACAAAATTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GRDTDEQEYRKILPLRFSPPAGQ*LEQNCQ Trigger: TTGGCAATTTTGTTCGAGTCACTGACCAGCTGGGGG...TGAAAACCTCAGTGGGAGGATCTTTCTGTACTCCTGCTCATCAGTATCTCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGATACTGATGAGCAGGAGTACAGAAAGATCCTCCCACTGAGGTTTTCAGGAACTAATGGCTGGTaGTCCCCTGCCTCTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GRDTDEQEYRKILPLRFSGTNGW*SPASVF Trigger: AAAGACAGAGGCAGGGGAGCACCAGCCATTAGTTCC...TGAAAACCTCAGTGGGAGGATCTTTCTGTACTCCTGCTCATCAGTATCTCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAAATACAGACATGTGTCCTCCAGCCCAAACAATGAGATAGCTACGGAATCCATCTCCCGGCACTaGTCCTCCCTCTGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNKYRHVSSSPNNEIATESISRH*SSLCSV Trigger: GACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGA...TTCCGTAGCTATCTCATTGTTTGGGCTGGAGGACACATGTCTGTATTTATTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR TCA 90 bp | GCACTGTTTACATTGCACAGAACACACTCACTAGGGAATTCTACTCTCAGAACTAGCGGCGCCAGTCATTaGTCACACCTTTTGGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALFTLHRTHSLGNSTLRTSGASH*SHLLDL Trigger: CAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCT...AGTTCTGAGAGTAGAATTCCCTAGTGAGTGTGTTCTGTGCAATGTAAACAGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCATCCTCTGCTTCCGATACTGCTGCAAAAACTCTTCATCATCCAAGTTTGGCTGGTGCTCCCCTaGCTCTGTCTTTGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFHPLLPILLQKLFIIQVWLVLP*LCLCLH Trigger: ATGAAGACAAAGACAGAGGCAGGGGAGCACCAGCCA...AACTTGGATGATGAAGAGTTTTTGCAGCAGTATCGGAAGCAGAGGATGGAAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
||
| CDS-3UTR GCA 90 bp | GGAAATGCACTGTTTACATTGCACAGAACACACTCACTAGGGAATTCTACTCTCTGCCAGCTCAGCCTCTaGAGGTGTGGAACTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GNALFTLHRTHSLGNSTLCQLSL*RCGTNG Trigger: GCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCA...GAGAGTAGAATTCCCTAGTGAGTGTGTTCTGTGCAATGTAAACAGTGCATTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCAAAAACCAAGGACTGGGAATACAGTTCAGCTGCAAGAGTAGTAACCAATGCCAGCTCAGCCTCTaGAGGTGTGGAACTAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSKNQGLGIQFSCKSSNQCQLSL*RCGTNG Trigger: GCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCA...TTGGTTACTACTCTTGCAGCTGAACTGTATTCCCAGTCCTTGGTTTTTGGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGATACTGATGAGCAGGAGTACAGAAAGATCCTCCCACTGAGGTTTTCATGGCAAGGCAGATCATaGAGCCATTCATGGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRDTDEQEYRKILPLRFSWQGRS*SHSWLQ Trigger: CTGAAGCCATGAATGGCTGCATGATCTGCCTTGCCA...TGAAAACCTCAGTGGGAGGATCTTTCTGTACTCCTGCTCATCAGTATCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR CCA 90 bp | ACCGAGCTACATTCCCAACCTTGTATGGACCCTGGTAGAGACAGATCTAGAGAATGTCCTCATCCTCGCTaGTGCTGTAGTAGTACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TELHSQPCMDPGRDRSRECPHPR*CCSSTV Trigger: TACAGTACTACTACAGCACCAGCGAGGATGAGGACA...TTCTCTAGATCTGTCTCTACCAGGGTCCATACAAGGTTGGGAATGTAGCTCGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGAAGACACAGGAAGGACAGAAATAAATACAGACATGTGTCCTCCAGCCCATGTCCTCATCCTCGCTaGTGCTGTAGTAGTACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ARRHRKDRNKYRHVSSSPCPHPR*CCSSTV Trigger: TACAGTACTACTACAGCACCAGCGAGGATGAGGACA...TGGGCTGGAGGACACATGTCTGTATTTATTTCTGTCCTTCCTGTGTCTTCTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGATACTGATGAGCAGGAGTACAGAAAGATCCTCCCACTGAGGTTTTCATCCTCTTCATCCAGATaGGACCTGCAGCTCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRDTDEQEYRKILPLRFSSSSSR*DLQLID Trigger: GTCTATGAGCTGCAGGTCCCATCTGGATGAAGAGGA...TGAAAACCTCAGTGGGAGGATCTTTCTGTACTCCTGCTCATCAGTATCTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR TCA 90 bp | GTCATCAGAAGACAATTTTCAAGACATTGCCTGCAAGGGTGCCATGTCAATATTTCGCTGTCTTCACTGTaGCAGGTGGCAGAGTTTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VIRRQFSRHCLQGCHVNISLSSL*QVAEFR Trigger: GCGAAACTCTGCCACCTGTCACAGTGAAGACAGCGA...AATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAGACACAGGAAGGACAGAAATAAATACAGACATGTGTCCTCCAGCCCAATCTCTTCCATCCTCTaGTTCCGATACTGCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARRHRKDRNKYRHVSSSPISSIL*FRYCCK Trigger: TTTGCAGCAGTATCGGAAGCAGAGGATGGAAGAGAT...TGGGCTGGAGGACACATGTCTGTATTTATTTCTGTCCTTCCTGTGTCTTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR CCA 90 bp | TGCCATGTCAATATTGACTGGAAACAGTATCAGAGATGTCACGCTAGAGAAGTATCATGCAGCCATTCATaGCTTCAGTCCCTGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: CHVNIDWKQYQRCHAREVSCSHS*LQSLGR Trigger: GCGTCCCAGGGACTGAAGCCATGAATGGCTGCATGA...TACTTCTCTAGCGTGACATCTCTGATACTGTTTCCAGTCAATATTGACATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GTCATCAGAAGACAATTTTCAAGACATTGCCTGCAAGGGTGCCATGTCAATATTTGGCTGGTGCTCCCCTaGCTCTGTCTTTGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VIRRQFSRHCLQGCHVNIWLVLP*LCLCLH Trigger: ATGAAGACAAAGACAGAGGCAGGGGAGCACCAGCCA...AATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAGACACAGGAAGGACAGAAATAAATACAGACATGTGTCCTCCAGCCCATGCTTCCGATACTGCTaGAAAAACTCTTCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ARRHRKDRNKYRHVSSSPCFRYC*KNSSSS Trigger: GGATGATGAAGAGTTTTTGCAGCAGTATCGGAAGCA...TGGGCTGGAGGACACATGTCTGTATTTATTTCTGTCCTTCCTGTGTCTTCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | AGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTCCTCTGCTTCCGATACTaGTGCAAAAACTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RCLPPNMTAVSKNHPFLFLCFRY*CKNSSS Trigger: TGATGAAGAGTTTTTGCAGCAGTATCGGAAGCAGAG...GAACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GCACTGTTTACATTGCACAGAACACACTCACTAGGGAATTCTACTCTCAGAACTTGGCAAGGCAGATCATaGAGCCATTCATGGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALFTLHRTHSLGNSTLRTWQGRS*SHSWLQ Trigger: CTGAAGCCATGAATGGCTGCATGATCTGCCTTGCCA...AGTTCTGAGAGTAGAATTCCCTAGTGAGTGTGTTCTGTGCAATGTAAACAGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| 3UTR CAA 72 bp | AAGCTCCACACACACCAATGTCAGTCAATAAGATGCTaGCCTCCCAACATGACAGCAGTCAGCAAAAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLHTHQCQSIRC*PPNMTAVSKNH Trigger: ATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCTTATTGACTGACATTGGTGTGTGTGGAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| 3UTR CAA 72 bp | TGCTCTGTCTCCAACTGCTTGAAGCGGCGCCAGTCATaGATCACACCTTTTGGACCTATAATAAGATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSVSNCLKRRQS*ITPFGPIIRSF Trigger: AAAGGATCTTATTATAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
||
| CDS-3UTR TCA 90 bp | AGAAATAAATACAGACATGTGTCCTCCAGCCCAAACAATGAGATAGCTACGGAACTTTTGGACCTGTATTaGTGGAGATGCCTTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNKYRHVSSSPNNEIATELLDLY*WRCLRL Trigger: CAGGCGAAGGCATCTCCATCAATACAGGTCCAAAAG...TTCCGTAGCTATCTCATTGTTTGGGCTGGAGGACACATGTCTGTATTTATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATAAATACAGACATGTGTCCTCCAGCCCAAACAATGAGATAGCTACGGAAAATTGGGGCCCTTTATaGAACTGCTGCCGCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RNKYRHVSSSPNNEIATENWGPL*NCCRIS Trigger: AGAGATGCGGCAGCAGTTTCATAAAGGGCCCCAATT...TTCCGTAGCTATCTCATTGTTTGGGCTGGAGGACACATGTCTGTATTTATTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GCCAGAAGACACAGGAAGGACAGAAATAAATACAGACATGTGTCCTCCAGCCCAGGGATTTCAAAAACTTaGTTGAATTGGGGCCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ARRHRKDRNKYRHVSSSPGISKT*LNWGPL Trigger: TAAAGGGCCCCAATTCAAGCAAGTTTTTGAAATCCC...TGGGCTGGAGGACACATGTCTGTATTTATTTCTGTCCTTCCTGTGTCTTCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR CCA 90 bp | ATAAGATCCTTTCTCCAAAAACCAAGGACTGGGAATACAGTTCAGCTGCAAGAGTGTCCTCATCCTCGCTaGTGCTGTAGTAGTACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IRSFLQKPRTGNTVQLQECPHPR*CCSSTV Trigger: TACAGTACTACTACAGCACCAGCGAGGATGAGGACA...CTCTTGCAGCTGAACTGTATTCCCAGTCCTTGGTTTTTGGAGAAAGGATCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGTTCACCACCGAGCTACATTCCCAACCTTGTATGGACCCTGGTAGAGACAATTGATCACACCTTTTaGACCTGTATTGATGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSSPPSYIPNLVWTLVETIDHTF*TCIDGD Trigger: ATCTCCATCAATACAGGTCCAAAAGGTGTGATCAAT...TGTCTCTACCAGGGTCCATACAAGGTTGGGAATGTAGCTCGGTGGTGAACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| 3UTR CAA 72 bp | TTTCAAGACATTGCCTGCAAGGGTGCCATGTCAATATaGACTGGAAACAGTATCAGAGATGTCACGCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FQDIACKGAMSI*TGNSIRDVTLE Trigger: CTCTAGCGTGACATCTCTGATACTGTTTCCAGTCAATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | CCAACCACCAAGCATATTACAGTATATCTATCAGTGGAAATATCAACAGCTATTTGCTCTGTCTCCAACTaGTTGAAGCGGCGCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTTKHITVYLSVEISTAICSVSN*LKRRQS Trigger: TGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCA...AATAGCTGTTGATATTTCCACTGATAGATATACTGTAATATGCTTGGTGGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR CCA 90 bp | GTCATCAGAAGACAATTTTCAAGACATTGCCTGCAAGGGTGCCATGTCAATATTCTGTCTTTGTCTTCATaGTCACTGTCCTCATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VIRRQFSRHCLQGCHVNILSLSS*SLSSSS Trigger: CGAGGATGAGGACAGTGACCATGAAGACAAAGACAG...AATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | CCAACCACCAAGCATATTACAGTATATCTATCAGTGGAAATATCAACAGCTATTGGAACTAATGGCTGGTaGTCCCCTGCCTCTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTTKHITVYLSVEISTAIGTNGW*SPASVF Trigger: AAAGACAGAGGCAGGGGAGCACCAGCCATTAGTTCC...AATAGCTGTTGATATTTCCACTGATAGATATACTGTAATATGCTTGGTGGTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR TCA 90 bp | CCAACCACCAAGCATATTACAGTATATCTATCAGTGGAAATATCAACAGCTATTCTTTTGGACCTGTATTaGTGGAGATGCCTTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTTKHITVYLSVEISTAILLDLY*WRCLRL Trigger: CAGGCGAAGGCATCTCCATCAATACAGGTCCAAAAG...AATAGCTGTTGATATTTCCACTGATAGATATACTGTAATATGCTTGGTGGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR TCA 90 bp | CCAACCACCAAGCATATTACAGTATATCTATCAGTGGAAATATCAACAGCTATTGAGTCATCTTCCCACTaGTTTTCTCCTGGAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTTKHITVYLSVEISTAIESSSH*FSPGGP Trigger: AGGACCTCCAGGAGAAAATCAGTGGGAAGATGACTC...AATAGCTGTTGATATTTCCACTGATAGATATACTGTAATATGCTTGGTGGTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAAATACAGACATGTGTCCTCCAGCCCAAACAATGAGATAGCTACGGAATGCTTCCGATACTGCTaGAAAAACTCTTCATCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RNKYRHVSSSPNNEIATECFRYC*KNSSSS Trigger: GGATGATGAAGAGTTTTTGCAGCAGTATCGGAAGCA...TTCCGTAGCTATCTCATTGTTTGGGCTGGAGGACACATGTCTGTATTTATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAAATACAGACATGTGTCCTCCAGCCCAAACAATGAGATAGCTACGGAACTCTGCTTCCGATACTaGTGCAAAAACTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RNKYRHVSSSPNNEIATELCFRY*CKNSSS Trigger: TGATGAAGAGTTTTTGCAGCAGTATCGGAAGCAGAG...TTCCGTAGCTATCTCATTGTTTGGGCTGGAGGACACATGTCTGTATTTATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR CCA 90 bp | CCAACCACCAAGCATATTACAGTATATCTATCAGTGGAAATATCAACAGCTATTTCCTCTTCATCCAGATaGGACCTGCAGCTCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PTTKHITVYLSVEISTAISSSSR*DLQLID Trigger: GTCTATGAGCTGCAGGTCCCATCTGGATGAAGAGGA...AATAGCTGTTGATATTTCCACTGATAGATATACTGTAATATGCTTGGTGGTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR GCA 90 bp | GTCATCAGAAGACAATTTTCAAGACATTGCCTGCAAGGGTGCCATGTCAATATTGGGATTTCAAAAACTTaGTTGAATTGGGGCCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VIRRQFSRHCLQGCHVNIGISKT*LNWGPL Trigger: TAAAGGGCCCCAATTCAAGCAAGTTTTTGAAATCCC...AATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR CCA 90 bp | CCAACCACCAAGCATATTACAGTATATCTATCAGTGGAAATATCAACAGCTATTCTGTCTTTGTCTTCATaGTCACTGTCCTCATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PTTKHITVYLSVEISTAILSLSS*SLSSSS Trigger: CGAGGATGAGGACAGTGACCATGAAGACAAAGACAG...AATAGCTGTTGATATTTCCACTGATAGATATACTGTAATATGCTTGGTGGTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| CDS-3UTR CCA 90 bp | GTCATCAGAAGACAATTTTCAAGACATTGCCTGCAAGGGTGCCATGTCAATATTAAAACCCTTCTCCACTaGGGATTTCAAAAACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VIRRQFSRHCLQGCHVNIKTLLH*GFQKLA Trigger: AGCAAGTTTTTGAAATCCCCAGTGGAGAAGGGTTTT...AATATTGACATGGCACCCTTGCAGGCAATGTCTTGAAAATTGTCTTCTGATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
||
| 3UTR CAA 72 bp | CGATACTGCTGCAAAAACTCTTCATCATCCAAGTTCTaGTCCTTTGTACCAAACTCCTTTAGAGTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RYCCKNSSSSKF*SFVPNSFRVIF Trigger: GAAGATGACTCTAAAGGAGTTTGGTACAAAGGACAAGAACTTGGATGATGAAGAGTTTTTGCAGCAGTATCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
||
| CDS-3UTR GCA 90 bp | TTAAATCCAACAGACACTTTCAAGACTCATTTACAGTTAGTTTCTGAGCAACCAATCTCTTCCATCCTCTaGTTCCGATACTGCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LNPTDTFKTHLQLVSEQPISSIL*FRYCCK Trigger: TTTGCAGCAGTATCGGAAGCAGAGGATGGAAGAGAT...TGGTTGCTCAGAAACTAACTGTAAATGAGTCTTGAAAGTGTCTGTTGGATTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009174.15 |
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| 3UTR CAA 72 bp | TTGCAATCAAGTGATTATGGAAATGCACTGTTTACATaGCACAGAACACACTCACTAGGGAATTCTACTCTC | + |
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Preference number: 4 (lower is better) Translates to: LQSSDYGNALFT*HRTHSLGNSTL Trigger: GAGAGTAGAATTCCCTAGTGAGTGTGTTCTGTGCAATGTAAACAGTGCATTTCCATAATCACTTGATTGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CCA 90 bp | CCAACCACCAAGCATATTACAGTATATCTATCAGTGGAAATATCAACAGCTATTAAAACCCTTCTCCACTaGGGATTTCAAAAACTTGCT | + |
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Preference number: 4 (lower is better) Translates to: PTTKHITVYLSVEISTAIKTLLH*GFQKLA Trigger: AGCAAGTTTTTGAAATCCCCAGTGGAGAAGGGTTTT...AATAGCTGTTGATATTTCCACTGATAGATATACTGTAATATGCTTGGTGGTTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CCA 90 bp | CCAACCACCAAGCATATTACAGTATATCTATCAGTGGAAATATCAACAGCTATTATTGATCACACCTTTTaGACCTGTATTGATGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: PTTKHITVYLSVEISTAIIDHTF*TCIDGD Trigger: ATCTCCATCAATACAGGTCCAAAAGGTGTGATCAAT...AATAGCTGTTGATATTTCCACTGATAGATATACTGTAATATGCTTGGTGGTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| 3UTR CAA 72 bp | AGTACAGCTATGCATCTGATTGCAAGTAAACATGATTaGCAATCAAGTGATTATGGAAATGCACTGTTTACA | + |
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Preference number: 4 (lower is better) Translates to: STAMHLIASKHD*QSSDYGNALFT Trigger: TGTAAACAGTGCATTTCCATAATCACTTGATTGCAAATCATGTTTACTTGCAATCAGATGCATAGCTGTACT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS CCA 90 bp | GCCTTCGCCTGCCAGCTCAGCCTCTGCAGGTGTGGAACTAATGGCTaGTGCTCCCCTGCCTCTGTCTTTGTCTTCATGGTCACTGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: AFACQLSLCRCGTNG*CSPASVFVFMVTVL Trigger: GAGGACAGTGACCATGAAGACAAAGACAGAGGCAGGGGAGCACCAGCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCAGGCGAAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000138314.4 ENSMUST00000147703.3 |
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| CDS GCA 90 bp | CGCTCCATCTCCCGGCACTGCTCCTCCCTCTGCTCTGTCTCCAACTaGTTGAAGCGGCGCCAGTCATTGATCACACCTTTTGGACCTGTA | + |
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Preference number: 5 (lower is better) Translates to: RSISRHCSSLCSVSN*LKRRQSLITPFGPV Trigger: TACAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000147703.3 |
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| CDS GCA 90 bp | TTCGCCTGCCAGCTCAGCCTCTGCAGGTGTGGAACTAATGGCTGGTaGTCCCCTGCCTCTGTCTTTGTCTTCATGGTCACTGTCCTCATC | + |
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Preference number: 5 (lower is better) Translates to: FACQLSLCRCGTNGW*SPASVFVFMVTVLI Trigger: GATGAGGACAGTGACCATGAAGACAAAGACAGAGGCAGGGGAGCACCAGCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCAGGCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000138314.4 ENSMUST00000147703.3 |
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| CDS GCA 90 bp | CCAAGATTTGATCCCCAGCACTGTATTGATGGAGATGCCTTCGCCTaGCAGCTCAGCCTCTGCAGGTGTGGAACTAATGGCTGGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: PRFDPQHCIDGDAFA*QLSLCRCGTNGWCS Trigger: GGAGCACCAGCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCAGGCGAAGGCATCTCCATCAATACAGTGCTGGGGATCAAATCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| CDS GCA 90 bp | ATTGATCACACCTTTTGGACCTGTATTGATGGAGATGCCTTCGCCTaGCAGCTCAGCCTCTGCAGGTGTGGAACTAATGGCTGGTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: IDHTFWTCIDGDAFA*QLSLCRCGTNGWCS Trigger: GGAGCACCAGCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCAGGCGAAGGCATCTCCATCAATACAGGTCCAAAAGGTGTGATCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000147703.3 |
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| CDS-3UTR CAA 90 bp | GCCTGCAAGGGTGCCATGTCAATATTGACTGGAAACAGTATCAGAGATGTCACGCCCCTGCCTCTGTCTTaGTCTTCATGGTCACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: ACKGAMSILTGNSIRDVTPLPLS*SSWSLS Trigger: GGACAGTGACCATGAAGACAAAGACAGAGGCAGGGG...CGTGACATCTCTGATACTGTTTCCAGTCAATATTGACATGGCACCCTTGCAGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CAA 90 bp | AACTTGCTTGAATTGGGGCCCTTTATGAAACTGCTGCCGCATCTCTTCCATCCTCCCCTGCCTCTGTCTTaGTCTTCATGGTCACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: NLLELGPFMKLLPHLFHPPLPLS*SSWSLS Trigger: GGACAGTGACCATGAAGACAAAGACAGAGGCAGGGG...AGGATGGAAGAGATGCGGCAGCAGTTTCATAAAGGGCCCCAATTCAAGCAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| CDS-3UTR CAA 90 bp | AAGAGTTCACCACCGAGCTACATTCCCAACCTTGTATGGACCCTGGTAGAGACAAAGCGGCGCCAGTCATaGATCACACCTTTTGGACCT | + |
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Preference number: 5 (lower is better) Translates to: KSSPPSYIPNLVWTLVETKRRQS*ITPFGP Trigger: AGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTT...TGTCTCTACCAGGGTCCATACAAGGTTGGGAATGTAGCTCGGTGGTGAACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CAA 90 bp | AGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTCTCTGTCTCCAACTGCTaGAAGCGGCGCCAGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: RCLPPNMTAVSKNHPFLFSVSNC*KRRQSL Trigger: CAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGA...GAACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CAA 90 bp | GCCTGCAAGGGTGCCATGTCAATATTGACTGGAAACAGTATCAGAGATGTCACGTCTGTCTCCAACTGCTaGAAGCGGCGCCAGTCATTG | + |
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Preference number: 5 (lower is better) Translates to: ACKGAMSILTGNSIRDVTSVSNC*KRRQSL Trigger: CAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGA...CGTGACATCTCTGATACTGTTTCCAGTCAATATTGACATGGCACCCTTGCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS CCA 90 bp | CCCTGCCTCTGTCTTTGTCTTCATGGTCACTGTCCTCATCCTCGCTaGTGCTGTAGTAGTACTGTAATTTCTCCCCCAGTAACTTATCAT | + |
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Preference number: 5 (lower is better) Translates to: PCLCLCLHGHCPHPR*CCSSTVISPPVTYH Trigger: ATGATAAGTTACTGGGGGAGAAATTACAGTACTACTACAGCACCAGCGAGGATGAGGACAGTGACCATGAAGACAAAGACAGAGGCAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000138314.4 ENSMUST00000147703.3 |
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| CDS CCA 90 bp | TGCAGGAAAGCTTCAAGGTCTACAGCAAAGAAATCTTCCCCCAGCTaGTCAGTGACTCGAACAAAATTGCCAATCAATTCACCCGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: CRKASRSTAKKSSPS*SVTRTKLPINSPAL Trigger: CAAGGCGGGTGAATTGATTGGCAATTTTGTTCGAGTCACTGACCAGCTGGGGGAAGATTTCTTTGCTGTAGACCTTGAAGCTTTCCTGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CAA 90 bp | GCCAGAAGACACAGGAAGGACAGAAATAAATACAGACATGTGTCCTCCAGCCCAGTGACTCGAACAAAATaGCCAATCAATTCACCCGCC | + |
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Preference number: 5 (lower is better) Translates to: ARRHRKDRNKYRHVSSSPVTRTK*PINSPA Trigger: GGCGGGTGAATTGATTGGCAATTTTGTTCGAGTCAC...TGGGCTGGAGGACACATGTCTGTATTTATTTCTGTCCTTCCTGTGTCTTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS GCA 90 bp | TGCCTCTGTCTTTGTCTTCATGGTCACTGTCCTCATCCTCGCTGGTaGTGTAGTAGTACTGTAATTTCTCCCCCAGTAACTTATCATCCA | + |
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Preference number: 5 (lower is better) Translates to: CLCLCLHGHCPHPRW*CSSTVISPPVTYHP Trigger: TGGATGATAAGTTACTGGGGGAGAAATTACAGTACTACTACAGCACCAGCGAGGATGAGGACAGTGACCATGAAGACAAAGACAGAGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000138314.4 ENSMUST00000147703.3 |
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| CDS CCA 90 bp | CTCTGTGGCAAGGCAGATCATGCAGCCATTCATGGCTTCAGTCCCTaGGACGCCATCTTCATAAATATGAACCATGATAAGTGTGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: LCGKADHAAIHGFSP*DAIFINMNHDKCAF Trigger: AAAAGCACACTTATCATGGTTCATATTTATGAAGATGGCGTCCCAGGGACTGAAGCCATGAATGGCTGCATGATCTGCCTTGCCACAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CAA 90 bp | AGAAATAAATACAGACATGTGTCCTCCAGCCCAAACAATGAGATAGCTACGGAACCCCTGCCTCTGTCTTaGTCTTCATGGTCACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RNKYRHVSSSPNNEIATEPLPLS*SSWSLS Trigger: GGACAGTGACCATGAAGACAAAGACAGAGGCAGGGG...TTCCGTAGCTATCTCATTGTTTGGGCTGGAGGACACATGTCTGTATTTATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CAA 90 bp | AAGATGCTTGCCTCCCAACATGACAGCAGTCAGCAAAAACCATCCTTTCCTGTTGTGACTCGAACAAAATaGCCAATCAATTCACCCGCC | + |
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Preference number: 5 (lower is better) Translates to: KMLASQHDSSQQKPSFPVVTRTK*PINSPA Trigger: GGCGGGTGAATTGATTGGCAATTTTGTTCGAGTCAC...AACAGGAAAGGATGGTTTTTGCTGACTGCTGTCATGTTGGGAGGCAAGCATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CAA 90 bp | TGCCATGTCAATATTGACTGGAAACAGTATCAGAGATGTCACGCTAGAGAAGTAAAGCGGCGCCAGTCATaGATCACACCTTTTGGACCT | + |
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Preference number: 5 (lower is better) Translates to: CHVNIDWKQYQRCHAREVKRRQS*ITPFGP Trigger: AGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTT...TACTTCTCTAGCGTGACATCTCTGATACTGTTTCCAGTCAATATTGACATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CAA 90 bp | GGAAGAGATACTGATGAGCAGGAGTACAGAAAGATCCTCCCACTGAGGTTTTCACCAAGTTCTTGTCCTTaGTACCAAACTCCTTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: GRDTDEQEYRKILPLRFSPSSCP*YQTPLE Trigger: CTCTAAAGGAGTTTGGTACAAAGGACAAGAACTTGG...TGAAAACCTCAGTGGGAGGATCTTTCTGTACTCCTGCTCATCAGTATCTCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS-3UTR CAA 90 bp | TTAAATCCAACAGACACTTTCAAGACTCATTTACAGTTAGTTTCTGAGCAACCACCAAGTTCTTGTCCTTaGTACCAAACTCCTTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: LNPTDTFKTHLQLVSEQPPSSCP*YQTPLE Trigger: CTCTAAAGGAGTTTGGTACAAAGGACAAGAACTTGG...TGGTTGCTCAGAAACTAACTGTAAATGAGTCTTGAAAGTGTCTGTTGGATTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009174.15 |
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| CDS GCA 72 bp | GATCCCCAGCACTGTATTGATGGAGATGCCTTCGCCTaGCAGCTCAGCCTCTGCAGGTGTGGAACTAATGGC | + |
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Preference number: 6 (lower is better) Translates to: DPQHCIDGDAFA*QLSLCRCGTNG Trigger: GCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCAGGCGAAGGCATCTCCATCAATACAGTGCTGGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138314.4 |
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| CDS CCA 72 bp | TGCCAGCTCAGCCTCTGCAGGTGTGGAACTAATGGCTaGTGCTCCCCTGCCTCTGTCTTTGTCTTCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: CQLSLCRCGTNG*CSPASVFVFMV Trigger: GACCATGAAGACAAAGACAGAGGCAGGGGAGCACCAGCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000138314.4 ENSMUST00000147703.3 |
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| CDS CAA 72 bp | CTGGCCCCAATAACTGAGCTCCTCACCCGACAGAATTaGACGGCGGGGTACTCTGTGGCAAGGCAGATCATG | + |
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Preference number: 6 (lower is better) Translates to: LAPITELLTRQN*TAGYSVARQIM Trigger: CATGATCTGCCTTGCCACAGAGTACCCCGCCGTCAAATTCTGTCGGGTGAGGAGCTCAGTTATTGGGGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS CAA 90 bp | TCCATCTCCCGGCACTGCTCCTCCCTCTGCTCTGTCTCCAACTGCTaGAAGCGGCGCCAGTCATTGATCACACCTTTTGGACCTGTATTG | + |
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Preference number: 6 (lower is better) Translates to: SISRHCSSLCSVSNC*KRRQSLITPFGPVL Trigger: CAATACAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGAGCAGTGCCGGGAGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000147703.3 |
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| CDS GCA 72 bp | CAGCTCAGCCTCTGCAGGTGTGGAACTAATGGCTGGTaGTCCCCTGCCTCTGTCTTTGTCTTCATGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: QLSLCRCGTNGW*SPASVFVFMVT Trigger: AGTGACCATGAAGACAAAGACAGAGGCAGGGGAGCACCAGCCATTAGTTCCACACCTGCAGAGGCTGAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000138314.4 ENSMUST00000147703.3 |
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| CDS CAA 90 bp | AAACGACTACTGGCCCCAATAACTGAGCTCCTCACCCGACAGAATTaGACGGCGGGGTACTCTGTGGCAAGGCAGATCATGCAGCCATTC | + |
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Preference number: 6 (lower is better) Translates to: KRLLAPITELLTRQN*TAGYSVARQIMQPF Trigger: GAATGGCTGCATGATCTGCCTTGCCACAGAGTACCCCGCCGTCAAATTCTGTCGGGTGAGGAGCTCAGTTATTGGGGCCAGTAGTCGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS GCA 72 bp | ACCTTTTGGACCTGTATTGATGGAGATGCCTTCGCCTaGCAGCTCAGCCTCTGCAGGTGTGGAACTAATGGC | + |
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Preference number: 6 (lower is better) Translates to: TFWTCIDGDAFA*QLSLCRCGTNG Trigger: GCCATTAGTTCCACACCTGCAGAGGCTGAGCTGGCAGGCGAAGGCATCTCCATCAATACAGGTCCAAAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000147703.3 |
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| CDS CAA 90 bp | TCCTCCCTCTGCTCTGTCTCCAACTGCTTGAAGCGGCGCCAGTCATaGATCACACCTTTTGGACCTGTATTGATGGAGATGCCTTCGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSLCSVSNCLKRRQS*ITPFGPVLMEMPSP Trigger: AGGCGAAGGCATCTCCATCAATACAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCAGAGGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000147703.3 |
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| CDS CAA 72 bp | TGCTCTGTCTCCAACTGCTTGAAGCGGCGCCAGTCATaGATCACACCTTTTGGACCTGTATTGATGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: CSVSNCLKRRQS*ITPFGPVLMEM Trigger: CATCTCCATCAATACAGGTCCAAAAGGTGTGATCAATGACTGGCGCCGCTTCAAGCAGTTGGAGACAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 ENSMUST00000147703.3 |
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| CDS TCA 72 bp | GGTCTACAGCAAAGAAATCTTCCCCCAGCTGGTCAGTaGCTCGAACAAAATTGCCAATCAATTCACCCGCCT | + |
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Preference number: 6 (lower is better) Translates to: GLQQRNLPPAGQ*LEQNCQSIHPP Trigger: AGGCGGGTGAATTGATTGGCAATTTTGTTCGAGTCACTGACCAGCTGGGGGAAGATTTCTTTGCTGTAGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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| CDS CCA 72 bp | GCTTCAAGGTCTACAGCAAAGAAATCTTCCCCCAGCTaGTCAGTGACTCGAACAAAATTGCCAATCAATTCA | + |
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Preference number: 6 (lower is better) Translates to: ASRSTAKKSSPS*SVTRTKLPINS Trigger: TGAATTGATTGGCAATTTTGTTCGAGTCACTGACCAGCTGGGGGAAGATTTCTTTGCTGTAGACCTTGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000009174.15 ENSMUST00000112940.8 |
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