Pregenerated sensors for PDCD7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041837Ensembl transcript IDs: ENSMUST00000048184.4, ENSMUST00000214433.2, ENSMUST00000215470.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGGCAGCCACTGCCCCATCATCTTCAGTAGCAGCCTCCCACACTaGACTGAAACTGGAAACTGTAGGTGCTCCTGGGAGCTGGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: PGSHCPIIFSSSLPH*TETGNCRCSWELEG Trigger: GCCCTCCAGCTCCCAGGAGCACCTACAGTTTCCAGTTTCAGTGCAGTGTGGGAGGCTGCTACTGAAGATGATGGGGCAGTGGCTGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR CCA 90 bp | AGCAGCCTCCCACACTGCACTGAAACTGGAAACTGTAGGTGCTCCTaGGAGCTGGAGGGCAGGTGGTATGGGAAGATAAGGAGCAGTAGC | + |
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Preference number: 1 (lower is better) Translates to: SSLPHCTETGNCRCS*ELEGRWYGKIRSSS Trigger: GCTACTGCTCCTTATCTTCCCATACCACCTGCCCTCCAGCTCCCAGGAGCACCTACAGTTTCCAGTTTCAGTGCAGTGTGGGAGGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR GCA 90 bp | TTCAGTAGCAGCCTCCCACACTGCACTGAAACTGGAAACTGTAGGTaGTCCTGGGAGCTGGAGGGCAGGTGGTATGGGAAGATAAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: FSSSLPHCTETGNCR*SWELEGRWYGKIRS Trigger: GCTCCTTATCTTCCCATACCACCTGCCCTCCAGCTCCCAGGAGCACCTACAGTTTCCAGTTTCAGTGCAGTGTGGGAGGCTGCTACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR TCA 90 bp | GACATGGATGTTTTTAGAAGCTTGAGCTATCCAGCCCCTACCATGTaGCTGAGATTACAGTCCCACAGGGAAATAAGTTTCTATTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: DMDVFRSLSYPAPTM*LRLQSHREISFYSW Trigger: CCAAGAATAGAAACTTATTTCCCTGTGGGACTGTAATCTCAGTCACATGGTAGGGGCTGGATAGCTCAAGCTTCTAAAAACATCCATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCAGGTGCTCCTGGGAGCTaGAGGGCAGGTGGTATGGGA | + |
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Preference number: 2 (lower is better) Translates to: PQDNSSKPSVILAATAPSGAPGS*RAGGMG Trigger: TCCCATACCACCTGCCCTCCAGCTCCCAGGAGCACC...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCAGCAGTGCTTGCCAGCTaGACCACACTCCTGGAGCAT | + |
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Preference number: 2 (lower is better) Translates to: PQDNSSKPSVILAATAPSAVLAS*TTLLEH Trigger: ATGCTCCAGGAGTGTGGTCCAGCTGGCAAGCACTGC...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR-3UTR CCA 90 bp | AAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCATCTTCAGTAGCAGCCTCCGAGCTGGAGGGCAGGTaGTATGGGAAGATAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: KPSVILAATAPSSSVAASELEGR*YGKIRS Trigger: GCTCCTTATCTTCCCATACCACCTGCCCTCCAGCTC...GGAGGCTGCTACTGAAGATGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR-3UTR GCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCACTCCAGAGGTACCCCTaGCTAGGGCAGAGAACAAAA | + |
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Preference number: 2 (lower is better) Translates to: PQDNSSKPSVILAATAPSLQRYP*LGQRTK Trigger: TTTTGTTCTCTGCCCTAGGCAGGGGTACCTCTGGAG...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR-3UTR CCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCAAACCTTATGAACCTCTaGCTCCAGAGGTACCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: PQDNSSKPSVILAATAPSNLMNL*LQRYPC Trigger: GCAGGGGTACCTCTGGAGCCAGAGGTTCATAAGGTT...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR-3UTR TCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCAGCTAACTCTACTCAGTaGACACCTTCAAGCAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: PQDNSSKPSVILAATAPSANSTQ*TPSSSS Trigger: GCTACTGCTTGAAGGTGTTCACTGAGTAGAGTTAGC...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR-3UTR GCA 90 bp | GGAAACTGTAGGTGCTCCTGGGAGCTGGAGGGCAGGTGGTATGGGAAGATAAGGTTCCAGCTAGGACAATaGCACACAGAGTTAAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: GNCRCSWELEGRWYGKIRFQLGQ*HTELSC Trigger: ACAACTTAACTCTGTGTGGCATTGTCCTAGCTGGAA...CCTTATCTTCCCATACCACCTGCCCTCCAGCTCCCAGGAGCACCTACAGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR CAA 90 bp | TACCCACCAATATATAACAAACCTGGAACAAATGAGCAGGCCACATaGAACCAAGCCTCTCAAAACAGAGGCAGATTTAGAGAGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: YPPIYNKPGTNEQAT*NQASQNRGRFREPR Trigger: CCTTGGCTCTCTAAATCTGCCTCTGTTTTGAGAGGCTTGGTTCAATGTGGCCTGCTCATTTGTTCCAGGTTTGTTATATATTGGTGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR GCA 72 bp | CACTGCCCCATCATCTTCAGTAGCAGCCTCCCACACTaGACTGAAACTGGAAACTGTAGGTGCTCCTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: HCPIIFSSSLPH*TETGNCRCSWE Trigger: CTCCCAGGAGCACCTACAGTTTCCAGTTTCAGTGCAGTGTGGGAGGCTGCTACTGAAGATGATGGGGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR CCA 72 bp | CCACACTGCACTGAAACTGGAAACTGTAGGTGCTCCTaGGAGCTGGAGGGCAGGTGGTATGGGAAGATAAGG | + |
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Preference number: 3 (lower is better) Translates to: PHCTETGNCRCS*ELEGRWYGKIR Trigger: CCTTATCTTCCCATACCACCTGCCCTCCAGCTCCCAGGAGCACCTACAGTTTCCAGTTTCAGTGCAGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR-3UTR CAA 90 bp | AACCTTATGAACCTCTGGCTCCAGAGGTACCCCTGCCTAGGGCAGAGAACAAAACCACACAGAGTTAAGTaGTGTAGAAGACTAGAGCGT | + |
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Preference number: 3 (lower is better) Translates to: NLMNLWLQRYPCLGQRTKPHRVK*CRRLER Trigger: ACGCTCTAGTCTTCTACACAACTTAACTCTGTGTGG...TTTTGTTCTCTGCCCTAGGCAGGGGTACCTCTGGAGCCAGAGGTTCATAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR CCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCATGGAGCGGAAGGCGGTaGCTGCGGAGGGGGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PQDNSSKPSVILAATAPSWSGRR*LRRGRS Trigger: GGACCTCCCCCTCCGCAGCCACCGCCTTCCGCTCCA...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR CCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCAAAGGGGCCGGGTCGCTaGGGAAGGGGCGGCGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: PQDNSSKPSVILAATAPSKGPGR*GRGGGK Trigger: TTTCCCGCCGCCCCTTCCCCAGCGACCCGGCCCCTT...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR GCA 90 bp | TCTCTAATATCTAGAGCTGCAGTGCTTGCCAGCTGGACCACACTCCTGGAGCATGCCTCGCGCAGGGACTaGCCCAAGCTGCGTAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SLISRAAVLASWTTLLEHASRRD*PKLRSR Trigger: GCGGCTACGCAGCTTGGGGCAGTCCCTGCGCGAGGC...ATGCTCCAGGAGTGTGGTCCAGCTGGCAAGCACTGCAGCTCTAGATATTAGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR CCA 90 bp | AACCTTATGAACCTCTGGCTCCAGAGGTACCCCTGCCTAGGGCAGAGAACAAAAGGGCGGACAGCCGAATaGAGCGGAAGGCGGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: NLMNLWLQRYPCLGQRTKGRTAE*SGRRWL Trigger: CAGCCACCGCCTTCCGCTCCATTCGGCTGTCCGCCC...TTTTGTTCTCTGCCCTAGGCAGGGGTACCTCTGGAGCCAGAGGTTCATAAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR GCA 90 bp | GGAAACTGTAGGTGCTCCTGGGAGCTGGAGGGCAGGTGGTATGGGAAGATAAGGTTGCCCAGATGTCGTTaGTGGGGAGCGGAGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GNCRCSWELEGRWYGKIRLPRCR*WGAEEG Trigger: TCCTTCCTCCGCTCCCCAGCAACGACATCTGGGCAA...CCTTATCTTCCCATACCACCTGCCCTCCAGCTCCCAGGAGCACCTACAGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR TCA 90 bp | AAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCATCTTCAGTAGCAGCCTCCCATCAGCAGCTGCTTTaGGTTCCTGCTCCCGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: KPSVILAATAPSSSVAASHQQLL*VPAPAS Trigger: AGAAGCGGGAGCAGGAACTCAAAGCAGCTGCTGATG...GGAGGCTGCTACTGAAGATGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR GCA 90 bp | GCCTCTCAAAACAGAGGCAGATTTAGAGAGCCAAGGCTACAGCCCATGCTAATAACCGCCTCCAGCCACTaGCGATCACGCAGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ASQNRGRFREPRLQPMLITASSH*RSRRRC Trigger: GCAGCGCCTGCGTGATCGGCAGTGGCTGGAGGCGGT...TATTAGCATGGGCTGTAGCCTTGGCTCTCTAAATCTGCCTCTGTTTTGAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR GCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCAGACCCCATCAGCAGCTaGTTTGAGTTCCTGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: PQDNSSKPSVILAATAPSDPISS*FEFLLP Trigger: CGGGAGCAGGAACTCAAAGCAGCTGCTGATGGGGTC...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR CCA 90 bp | TCTCTAATATCTAGAGCTGCAGTGCTTGCCAGCTGGACCACACTCCTGGAGCATCCCAGATGTCGTTGCTaGGGAGCGGAGGAAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: SLISRAAVLASWTTLLEHPRCRC*GAEEGP Trigger: GGGTCCTTCCTCCGCTCCCCAGCAACGACATCTGGG...ATGCTCCAGGAGTGTGGTCCAGCTGGCAAGCACTGCAGCTCTAGATATTAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR TCA 90 bp | CCTGTTCTTACCCACCAATATATAACAAACCTGGAACAAATGAGCAGGCCACATCGTAGTGGCGCCGCCTaGGCGTGCAGGGAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PVLTHQYITNLEQMSRPHRSGAA*ACREAQ Trigger: CTGGGCCTCCCTGCACGCTCAGGCGGCGCCACTACG...ATGTGGCCTGCTCATTTGTTCCAGGTTTGTTATATATTGGTGGGTAAGAACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR TCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCACATGCCTTATCTGAATaGGCGCGGGCAAGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: PQDNSSKPSVILAATAPSHALSE*ARARSA Trigger: AGCACTCCTTGCCCGCGCTCATTCAGATAAGGCATG...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR CCA 90 bp | GGAAACTGTAGGTGCTCCTGGGAGCTGGAGGGCAGGTGGTATGGGAAGATAAGGGTAATACTGCCGGAATaGCTGCAGGAGGTGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: GNCRCSWELEGRWYGKIRVILPE*LQEVSK Trigger: CTTGCTCACCTCCTGCAGCCATTCCGGCAGTATTAC...CCTTATCTTCCCATACCACCTGCCCTCCAGCTCCCAGGAGCACCTACAGTTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR TCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCACAATCATGCCTTATCTaGATGAGCGCGGGCAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PQDNSSKPSVILAATAPSQSCLI*MSAGKE Trigger: CTCCTTGCCCGCGCTCATTCAGATAAGGCATGATTG...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR GCA 90 bp | GCCTCTCAAAACAGAGGCAGATTTAGAGAGCCAAGGCTACAGCCCATGCTAATACAGCGGTCAATCTCCTaGTCCCGTTCCGTGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ASQNRGRFREPRLQPMLIQRSIS*SRSVAC Trigger: GCAGGCCACGGAACGGGAGCAGGAGATTGACCGCTG...TATTAGCATGGGCTGTAGCCTTGGCTCTCTAAATCTGCCTCTGTTTTGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR TCA 90 bp | ATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCGTAGTGGCGCCGCCTaGGCGTGCAGGGAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: IAGMLEEVSSISSHFSEIRSGAA*ACREAQ Trigger: CTGGGCCTCCCTGCACGCTCAGGCGGCGCCACTACG...GATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
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| CDS-3UTR GCA 90 bp | TTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCGCCTCGCGCAGGGACTaGCCCAAGCTGCGTAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LLECWKKSPVFQAIFLRSASRRD*PKLRSR Trigger: GCGGCTACGCAGCTTGGGGCAGTCCCTGCGCGAGGC...GGATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
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| CDS-3UTR CCA 90 bp | TCTCTAATATCTAGAGCTGCAGTGCTTGCCAGCTGGACCACACTCCTGGAGCATGGAAGGACCCATCCTTaGGGAACCGAGTTGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SLISRAAVLASWTTLLEHGRTHP*GTELPF Trigger: GAAAGGCAACTCGGTTCCCCAAGGATGGGTCCTTCC...ATGCTCCAGGAGTGTGGTCCAGCTGGCAAGCACTGCAGCTCTAGATATTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR TCA 90 bp | TCTCTAATATCTAGAGCTGCAGTGCTTGCCAGCTGGACCACACTCCTGGAGCATAATGGCTGCAGGAGGTaGGCAAGTGGGAACTCATCT | + |
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Preference number: 4 (lower is better) Translates to: SLISRAAVLASWTTLLEHNGCRR*ASGNSS Trigger: AGATGAGTTCCCACTTGCTCACCTCCTGCAGCCATT...ATGCTCCAGGAGTGTGGTCCAGCTGGCAAGCACTGCAGCTCTAGATATTAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR GCA 90 bp | TCTCTAATATCTAGAGCTGCAGTGCTTGCCAGCTGGACCACACTCCTGGAGCATTTTTCCTCCACTTCCTaGACGCACTTCACCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLISRAAVLASWTTLLEHFSSTS*THFTLQ Trigger: CTGGAGGGTGAAGTGCGTGCAGGAAGTGGAGGAAAA...ATGCTCCAGGAGTGTGGTCCAGCTGGCAAGCACTGCAGCTCTAGATATTAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR GCA 90 bp | GCCTCTCAAAACAGAGGCAGATTTAGAGAGCCAAGGCTACAGCCCATGCTAATACAGCTGAATGGCCGTTaGCCAGATGTCGTTGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ASQNRGRFREPRLQPMLIQLNGR*PDVVAG Trigger: CCCAGCAACGACATCTGGGCAACGGCCATTCAGCTG...TATTAGCATGGGCTGTAGCCTTGGCTCTCTAAATCTGCCTCTGTTTTGAGAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR CCA 90 bp | GGAAACTGTAGGTGCTCCTGGGAGCTGGAGGGCAGGTGGTATGGGAAGATAAGGTGTCCACCATCCTTTTaGTGTCTGATTGCTTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GNCRCSWELEGRWYGKIRCPPSF*CLIAFS Trigger: GGAAAAAGCAATCAGACACCAAAAGGATGGTGGACA...CCTTATCTTCCCATACCACCTGCCCTCCAGCTCCCAGGAGCACCTACAGTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR CCA 90 bp | AAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCATCTTCAGTAGCAGCCTCCGATCCCCGAATAACTTaGACTCAATTTCCCGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: KPSVILAATAPSSSVAASDPRIT*TQFPVS Trigger: AGAAACGGGAAATTGAGTCCAAGTTATTCGGGGATC...GGAGGCTGCTACTGAAGATGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR CCA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCATTTCGGATGATCAGATaGTACCAGGTACTGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: PQDNSSKPSVILAATAPSFRMIR*YQVLIP Trigger: TGGGATCAGTACCTGGTACCATCTGATCATCCGAAA...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR GCA 90 bp | TTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCCAGCGGTCAATCTCCTaGTCCCGTTCCGTGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LLECWKKSPVFQAIFLRSQRSIS*SRSVAC Trigger: GCAGGCCACGGAACGGGAGCAGGAGATTGACCGCTG...GGATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTCAAAACAGAGGCAGATTTAGAGAGCCAAGGCTACAGCCCATGCTAATAGCTGCTTTGAGTTCCTaGTCCCGCTTCTTTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ASQNRGRFREPRLQPMLIAALSS*SRFFSS Trigger: GGAGGAAAAGAAGCGGGAGCAGGAACTCAAAGCAGC...TATTAGCATGGGCTGTAGCCTTGGCTCTCTAAATCTGCCTCTGTTTTGAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR TCA 90 bp | CCTGTTCTTACCCACCAATATATAACAAACCTGGAACAAATGAGCAGGCCACATGAAAGTCTCATCCGCTaGAGCAGGAGGACAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: PVLTHQYITNLEQMSRPHESLIR*SRRTDP Trigger: GGGGTCTGTCCTCCTGCTTCAGCGGATGAGACTTTC...ATGTGGCCTGCTCATTTGTTCCAGGTTTGTTATATATTGGTGGGTAAGAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| 3UTR CAA 72 bp | GGCTTTCCAGCTAGGACAATGCCACACAGAGTTAAGTaGTGTAGAAGACTAGAGCGTGAGACAACCGCATCT | + |
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Preference number: 4 (lower is better) Translates to: GFPARTMPHRVK*CRRLERETTAS Trigger: AGATGCGGTTGTCTCACGCTCTAGTCTTCTACACAACTTAACTCTGTGTGGCATTGTCCTAGCTGGAAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR GCA 90 bp | TTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCGACCCCATCAGCAGCTaGTTTGAGTTCCTGCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: LLECWKKSPVFQAIFLRSDPISS*FEFLLP Trigger: CGGGAGCAGGAACTCAAAGCAGCTGCTGATGGGGTC...GGATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
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| CDS-3UTR CCA 90 bp | CCTGTTCTTACCCACCAATATATAACAAACCTGGAACAAATGAGCAGGCCACATCAGGAGGTGAGCAAGTaGGAACTCATCTGGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: PVLTHQYITNLEQMSRPHQEVSK*ELIWIP Trigger: GGGGATCCAGATGAGTTCCCACTTGCTCACCTCCTG...ATGTGGCCTGCTCATTTGTTCCAGGTTTGTTATATATTGGTGGGTAAGAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
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| CDS-3UTR TCA 90 bp | AAATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGAGGAGCCTTATCTGAATaGGCGCGGGCAAGGAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KLLECWKKSPVFQAIFLRGALSE*ARARSA Trigger: AGCACTCCTTGCCCGCGCTCATTCAGATAAGGCTCC...TCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
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| CDS-3UTR CCA 90 bp | ATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCAGGAGGTGAGCAAGTaGGAACTCATCTGGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: IAGMLEEVSSISSHFSEIQEVSK*ELIWIP Trigger: GGGGATCCAGATGAGTTCCCACTTGCTCACCTCCTG...GATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
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| CDS-3UTR TCA 90 bp | AAATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGACATCAGCAGCTGCTTTaGGTTCCTGCTCCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLECWKKSPVFQAIFLRHQQLL*VPAPAS Trigger: AGAAGCGGGAGCAGGAACTCAAAGCAGCTGCTGATG...TCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCAATGGCTGCAGGAGGTaGGCAAGTGGGAACTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IAGMLEEVSSISSHFSEINGCRR*ASGNSS Trigger: AGATGAGTTCCCACTTGCTCACCTCCTGCAGCCATT...GATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTTCTTACCCACCAATATATAACAAACCTGGAACAAATGAGCAGGCCACATGATGGTACCAGGTACTaGTCCCAATCATGCCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: PVLTHQYITNLEQMSRPHDGTRY*SQSCLI Trigger: GATAAGGCATGATTGGGATCAGTACCTGGTACCATC...ATGTGGCCTGCTCATTTGTTCCAGGTTTGTTATATATTGGTGGGTAAGAACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS-3UTR CCA 90 bp | ATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCGTAATACTGCCGGAATaGCTGCAGGAGGTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IAGMLEEVSSISSHFSEIVILPE*LQEVSK Trigger: CTTGCTCACCTCCTGCAGCCATTCCGGCAGTATTAC...GATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS-3UTR GCA 90 bp | AAATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATTTTCCTCCACTTCCTaGACGCACTTCACCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KLLECWKKSPVFQAIFLRFSSTS*THFTLQ Trigger: CTGGAGGGTGAAGTGCGTGCAGGAAGTGGAGGAAAA...TCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS-3UTR GCA 90 bp | AAATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGAGCTGCTTTGAGTTCCTaGTCCCGCTTCTTTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLECWKKSPVFQAIFLRAALSS*SRFFSS Trigger: GGAGGAAAAGAAGCGGGAGCAGGAACTCAAAGCAGC...TCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCAAAACAGAGGCAGATTTAGAGAGCCAAGGCTACAGCCCATGCTAATACTTTTGGTGTCTGATTaGTTTTTCCTTACTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASQNRGRFREPRLQPMLILLVSD*FFLTSA Trigger: AGCTGAAGTAAGGAAAAAGCAATCAGACACCAAAAG...TATTAGCATGGGCTGTAGCCTTGGCTCTCTAAATCTGCCTCTGTTTTGAGAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCTGTCCACCATCCTTTTaGTGTCTGATTGCTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLECWKKSPVFQAIFLRSCPPSF*CLIAFS Trigger: GGAAAAAGCAATCAGACACCAAAAGGATGGTGGACA...GGATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| 3UTR CAA 72 bp | ATATATAACAAACCTGGAACAAATGAGCAGGCCACATaGAACCAAGCCTCTCAAAACAGAGGCAGATTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IYNKPGTNEQAT*NQASQNRGRFR Trigger: TCTAAATCTGCCTCTGTTTTGAGAGGCTTGGTTCAATGTGGCCTGCTCATTTGTTCCAGGTTTGTTATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS-3UTR CCA 90 bp | AAATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGAGATCCCCGAATAACTTaGACTCAATTTCCCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLECWKKSPVFQAIFLRDPRIT*TQFPVS Trigger: AGAAACGGGAAATTGAGTCCAAGTTATTCGGGGATC...TCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS-3UTR GCA 90 bp | ATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCTTTTGGTGTCTGATTaGTTTTTCCTTACTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IAGMLEEVSSISSHFSEILLVSD*FFLTSA Trigger: AGCTGAAGTAAGGAAAAAGCAATCAGACACCAAAAG...GATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS GCA 90 bp | AACGCAACCGCGCGCGGACTTCACCCAGGCTGGGCCCGGCGGGTGTaGGCGGGGTCCGGAGGCCACCGGGCCGCCGGGGGTTCCCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: NATARGLHPGWARRV*AGSGGHRAAGGSRT Trigger: TGTTCGGGAACCCCCGGCGGCCCGGTGGCCTCCGGACCCCGCGCACACCCGCCGGGCCCAGCCTGGGTGAAGTCCGCGCGCGGTTGCGTT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS GCA 90 bp | GGGTTCCCGAACACCGCCTCCAGCCACTGCCGATCACGCAGGCGCTaGAGGGCCGCGTCTCCGAGCACGTCGGGCGGCGGCGGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GFPNTASSHCRSRRR*RAASPSTSGGGGAS Trigger: GGAGGCGCCGCCGCCGCCCGACGTGCTCGGAGACGCGGCCCTGCAGCGCCTGCGTGATCGGCAGTGGCTGGAGGCGGTGTTCGGGAACCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS GCA 90 bp | AGGCCACCGGGCCGCCGGGGGTTCCCGAACACCGCCTCCAGCCACTaGCGATCACGCAGGCGCTGCAGGGCCGCGTCTCCGAGCACGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RPPGRRGFPNTASSH*RSRRRCRAASPSTS Trigger: CGACGTGCTCGGAGACGCGGCCCTGCAGCGCCTGCGTGATCGGCAGTGGCTGGAGGCGGTGTTCGGGAACCCCCGGCGGCCCGGTGGCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS TCA 90 bp | AGCGGCTGCAGCCGCTCCGCTAGCTCCGCTCGTAGTGGCGCCGCCTaGGCGTGCAGGGAGGCCCAGGCTGCTCCGTCGGCCTCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SGCSRSASSARSGAA*ACREAQAAPSASAS Trigger: CGAGGCTGAGGCCGACGGAGCAGCCTGGGCCTCCCTGCACGCTCAGGCGGCGCCACTACGAGCGGAGCTAGCGGAGCGGCTGCAGCCGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048184.4 ENSMUST00000215470.2 |
||
| CDS GCA 90 bp | AGGGAGGCCCAGGCTGCTCCGTCGGCCTCAGCCTCGCGCAGGGACTaGCCCAAGCTGCGTAGCCGCCGCACCAAACGCAAAGCGGAACGC | + |
|
Preference number: 5 (lower is better) Translates to: REAQAAPSASASRRD*PKLRSRRTKRKAER Trigger: GCGTTCCGCTTTGCGTTTGGTGCGGCGGCTACGCAGCTTGGGGCAGTCCCTGCGCGAGGCTGAGGCCGACGGAGCAGCCTGGGCCTCCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048184.4 ENSMUST00000215470.2 |
||
| CDS CCA 90 bp | GAGCGCGGGCAAGGAGTGCTCAGCCTGGAGGTAATACTGCCGGAATaGCTGCAGGAGGTGAGCAAGTGGGAACTCATCTGGATCCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: ERGQGVLSLEVILPE*LQEVSKWELIWIPE Trigger: TTCGGGGATCCAGATGAGTTCCCACTTGCTCACCTCCTGCAGCCATTCCGGCAGTATTACCTCCAGGCTGAGCACTCCTTGCCCGCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 ENSMUST00000215470.2 |
||
| CDS-3UTR CAA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCAGTTGCCCAGATGTCGTaGCTGGGGAGCGGAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQDNSSKPSVILAATAPSVAQMS*LGSGGR Trigger: CCTTCCTCCGCTCCCCAGCAACGACATCTGGGCAAC...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS-3UTR CAA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCAGCAGCTGAATGGCCGTaGCCCAGATGTCGTTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PQDNSSKPSVILAATAPSAAEWP*PRCRCW Trigger: CCAGCAACGACATCTGGGCAACGGCCATTCAGCTGC...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS-3UTR CAA 90 bp | CCACAGGACAACAGTTCTAAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCAAGGAAGGACCCATCCTaGGGGAACCGAGTTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PQDNSSKPSVILAATAPSRKDPS*GNRVAF Trigger: AAAGGCAACTCGGTTCCCCAAGGATGGGTCCTTCCT...TGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTTAGAACTGTTGTCCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS TCA 90 bp | GAGCTTTCTCAGCCGCTGAAGATGGTGCTCGAAAGTCTCATCCGCTaGAGCAGGAGGACAGACCCCTTTCCTTGCTGCAGCTTCTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ELSQPLKMVLESLIR*SRRTDPFPCCSFFP Trigger: AGGAAAGAAGCTGCAGCAAGGAAAGGGGTCTGTCCTCCTGCTTCAGCGGATGAGACTTTCGAGCACCATCTTCAGCGGCTGAGAAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 ENSMUST00000215470.2 |
||
| CDS TCA 90 bp | GATCAGATGGTACCAGGTACTGATCCCAATCATGCCTTATCTGAATaGGCGCGGGCAAGGAGTGCTCAGCCTGGAGGTAATACTGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: DQMVPGTDPNHALSE*ARARSAQPGGNTAG Trigger: TCCGGCAGTATTACCTCCAGGCTGAGCACTCCTTGCCCGCGCTCATTCAGATAAGGCATGATTGGGATCAGTACCTGGTACCATCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 |
||
| CDS-3UTR CAA 90 bp | AACCTTATGAACCTCTGGCTCCAGAGGTACCCCTGCCTAGGGCAGAGAACAAAAGACAGACCCCTTTCCTaGCTGCAGCTTCTTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NLMNLWLQRYPCLGQRTKDRPLS*LQLLSS Trigger: TGAGGAAAGAAGCTGCAGCAAGGAAAGGGGTCTGTC...TTTTGTTCTCTGCCCTAGGCAGGGGTACCTCTGGAGCCAGAGGTTCATAAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS CCA 90 bp | AAGGACCCATCCTTGGGGAACCGAGTTGCCTTTCGGATGATCAGATaGTACCAGGTACTGATCCCAATCATGCCTTATCTGAATGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KDPSLGNRVAFRMIR*YQVLIPIMPYLNER Trigger: GCGCTCATTCAGATAAGGCATGATTGGGATCAGTACCTGGTACCATCTGATCATCCGAAAGGCAACTCGGTTCCCCAAGGATGGGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 |
||
| CDS-3UTR CAA 90 bp | AAGCCATCAGTGATCCTGGCAGCCACTGCCCCATCATCTTCAGTAGCAGCCTCCATGTCCACCATCCTTTaGGTGTCTGATTGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPSVILAATAPSSSVAASMSTIL*VSDCFF Trigger: GAAAAAGCAATCAGACACCAAAAGGATGGTGGACAT...GGAGGCTGCTACTGAAGATGATGGGGCAGTGGCTGCCAGGATCACTGATGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS-3UTR CAA 90 bp | TCTCTAATATCTAGAGCTGCAGTGCTTGCCAGCTGGACCACACTCCTGGAGCATGGATCCCCGAATAACTaGGACTCAATTTCCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLISRAAVLASWTTLLEHGSPNN*DSISRF Trigger: GAAACGGGAAATTGAGTCCAAGTTATTCGGGGATCC...ATGCTCCAGGAGTGTGGTCCAGCTGGCAAGCACTGCAGCTCTAGATATTAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS GCA 90 bp | TCTTTTCTCTGTTTCTTTTCCAGTTCTCGTCTCCTCTCCTCCTCCTaGTCTCCTTCTAGCATAACTCGGAGGGCTCTCTCTTCAGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFLCFFSSSRLLSSS*SPSSITRRALSSAS Trigger: TGAAGCTGAAGAGAGAGCCCTCCGAGTTATGCTAGAAGGAGAGCAGGAGGAGGAGAGGAGACGAGAACTGGAAAAGAAACAGAGAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 ENSMUST00000215470.2 |
||
| CDS-3UTR CAA 90 bp | CCTGTTCTTACCCACCAATATATAACAAACCTGGAACAAATGAGCAGGCCACATCCATCAGCAGCTGCTTaGAGTTCCTGCTCCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PVLTHQYITNLEQMSRPHPSAAA*SSCSRF Trigger: GAAGCGGGAGCAGGAACTCAAAGCAGCTGCTGATGG...ATGTGGCCTGCTCATTTGTTCCAGGTTTGTTATATATTGGTGGGTAAGAACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCCCATCAGCAGCTGCTTaGAGTTCCTGCTCCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLECWKKSPVFQAIFLRSPSAAA*SSCSRF Trigger: GAAGCGGGAGCAGGAACTCAAAGCAGCTGCTGATGG...GGATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCCTAGGTCCTAAGATGTaGGAGCCTTATCTGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LLECWKKSPVFQAIFLRSLGPKM*EPYLNE Trigger: CTCATTCAGATAAGGCTCCAACATCTTAGGACCTAG...GGATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGATCCATGTCCACCATCCTTTaGGTGTCTGATTGCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLECWKKSPVFQAIFLRSMSTIL*VSDCFF Trigger: GAAAAAGCAATCAGACACCAAAAGGATGGTGGACAT...GGATCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS-3UTR CAA 90 bp | AAATTGCTGGAATGTTGGAAGAAGTCTCCAGTATTTCAAGCCATTTTTCTGAGAGGATCCCCGAATAACTaGGACTCAATTTCCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLLECWKKSPVFQAIFLRGSPNN*DSISRF Trigger: GAAACGGGAAATTGAGTCCAAGTTATTCGGGGATCC...TCTCAGAAAAATGGCTTGAAATACTGGAGACTTCTTCCAACATTCCAGCAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215470.2 |
||
| CDS GCA 72 bp | GGCCGCCGGGGGTTCCCGAACACCGCCTCCAGCCACTaGCGATCACGCAGGCGCTGCAGGGCCGCGTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GRRGFPNTASSH*RSRRRCRAASP Trigger: CGGAGACGCGGCCCTGCAGCGCCTGCGTGATCGGCAGTGGCTGGAGGCGGTGTTCGGGAACCCCCGGCGGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS CCA 72 bp | CGGCGGGGGCGGACAGCCGAATGGAGCGGAAGGCGGTaGCTGCGGAGGGGGAGGTCCCTGACGGCTCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RRGRTAEWSGRR*LRRGRSLTALG Trigger: GCCCAGAGCCGTCAGGGACCTCCCCCTCCGCAGCCACCGCCTTCCGCTCCATTCGGCTGTCCGCCCCCGCCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS TCA 72 bp | AGCCGCTCCGCTAGCTCCGCTCGTAGTGGCGCCGCCTaGGCGTGCAGGGAGGCCCAGGCTGCTCCGTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSASSARSGAA*ACREAQAAPSA Trigger: GGCCGACGGAGCAGCCTGGGCCTCCCTGCACGCTCAGGCGGCGCCACTACGAGCGGAGCTAGCGGAGCGGCT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048184.4 ENSMUST00000215470.2 |
||
| CDS GCA 72 bp | AACACCGCCTCCAGCCACTGCCGATCACGCAGGCGCTaGAGGGCCGCGTCTCCGAGCACGTCGGGCGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: NTASSHCRSRRR*RAASPSTSGGG Trigger: GCCGCCGCCCGACGTGCTCGGAGACGCGGCCCTGCAGCGCCTGCGTGATCGGCAGTGGCTGGAGGCGGTGTT 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048184.4 |
||
| CDS GCA 72 bp | CGTCGGCCTCAGCCTCGCGCAGGGACTGCCCCAAGCTaGGTAGCCGCCGCACCAAACGCAAAGCGGAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRPQPRAGTAPS*VAAAPNAKRNA Trigger: TGCGTTCCGCTTTGCGTTTGGTGCGGCGGCTACGCAGCTTGGGGCAGTCCCTGCGCGAGGCTGAGGCCGACG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048184.4 ENSMUST00000215470.2 |
||
| CDS GCA 72 bp | TCCTGCACGCACTTCACCCTCCAGCGGTCAATCTCCTaGTCCCGTTCCGTGGCCTGCGCGGCCTCCGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCTHFTLQRSIS*SRSVACAASAS Trigger: GGAGGCGGAGGCCGCGCAGGCCACGGAACGGGAGCAGGAGATTGACCGCTGGAGGGTGAAGTGCGTGCAGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 ENSMUST00000215470.2 |
||
| CDS TCA 72 bp | CAGCCGCTGAAGATGGTGCTCGAAAGTCTCATCCGCTaGAGCAGGAGGACAGACCCCTTTCCTTGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: QPLKMVLESLIR*SRRTDPFPCCS Trigger: GCTGCAGCAAGGAAAGGGGTCTGTCCTCCTGCTTCAGCGGATGAGACTTTCGAGCACCATCTTCAGCGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 ENSMUST00000215470.2 |
||
| CDS CCA 72 bp | CAAGGAGTGCTCAGCCTGGAGGTAATACTGCCGGAATaGCTGCAGGAGGTGAGCAAGTGGGAACTCATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGVLSLEVILPE*LQEVSKWELIW Trigger: CCAGATGAGTTCCCACTTGCTCACCTCCTGCAGCCATTCCGGCAGTATTACCTCCAGGCTGAGCACTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 ENSMUST00000215470.2 |
||
| CDS GCA 72 bp | GGAGCGGAGGAAGGACCCATCCTTGGGGAACCGAGTTaGCTTTCGGATGATCAGATGGTACCAGGTACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: GAEEGPILGEPS*LSDDQMVPGTD Trigger: ATCAGTACCTGGTACCATCTGATCATCCGAAAGGCAACTCGGTTCCCCAAGGATGGGTCCTTCCTCCGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 |
||
| CDS TCA 72 bp | GTACCAGGTACTGATCCCAATCATGCCTTATCTGAATaGGCGCGGGCAAGGAGTGCTCAGCCTGGAGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: VPGTDPNHALSE*ARARSAQPGGN Trigger: ATTACCTCCAGGCTGAGCACTCCTTGCCCGCGCTCATTCAGATAAGGCATGATTGGGATCAGTACCTGGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 |
||
| CDS CCA 72 bp | TCCTTGGGGAACCGAGTTGCCTTTCGGATGATCAGATaGTACCAGGTACTGATCCCAATCATGCCTTATCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLGNRVAFRMIR*YQVLIPIMPYL Trigger: CAGATAAGGCATGATTGGGATCAGTACCTGGTACCATCTGATCATCCGAAAGGCAACTCGGTTCCCCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 |
||
| CDS CAA 90 bp | AGTTTCCTCAGCTTCTCTAAAGCACGCAGAATGTCCACCATCCTTTaGGTGTCTGATTGCTTTTTCCTTACTTCAGCTAAGACCCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SFLSFSKARRMSTIL*VSDCFFLTSAKTPS Trigger: TGATGGGGTCTTAGCTGAAGTAAGGAAAAAGCAATCAGACACCAAAAGGATGGTGGACATTCTGCGTGCTTTAGAGAAGCTGAGGAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 ENSMUST00000215470.2 |
||
| CDS CCA 72 bp | GAGCAAGTGGGAACTCATCTGGATCCCCGAATAACTTaGACTCAATTTCCCGTTTCTGTAGTAGAAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EQVGTHLDPRIT*TQFPVSVVEVS Trigger: AGAAACTTCTACTACAGAAACGGGAAATTGAGTCCAAGTTATTCGGGGATCCAGATGAGTTCCCACTTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 ENSMUST00000215470.2 |
||
| CDS CAA 72 bp | AGCTTCTCTAAAGCACGCAGAATGTCCACCATCCTTTaGGTGTCTGATTGCTTTTTCCTTACTTCAGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFSKARRMSTIL*VSDCFFLTSAK Trigger: CTTAGCTGAAGTAAGGAAAAAGCAATCAGACACCAAAAGGATGGTGGACATTCTGCGTGCTTTAGAGAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000048184.4 ENSMUST00000214433.2 ENSMUST00000215470.2 |
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