Pregenerated sensors for PDCD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021576Ensembl transcript IDs: ENSMUST00000022060.7, ENSMUST00000222759.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCACTGACCAGCATATTCACATATGTACAGCCAGGTCCCCAAGTATaGACGATACAGCCAACGGGAAGGACGGCATCTCACTGCAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: SLTSIFTYVQPGPQV*TIQPTGRTASHCSC Trigger: ACAGCTGCAGTGAGATGCCGTCCTTCCCGTTGGCTGTATCGTTCATACTTGGGGACCTGGCTGTACATATGTGAATATGCTGGTCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| 3UTR CAA 90 bp | GGCATCTCACTGCAGCTGTGCCCTGTTCTATCACAGGTAAGGGATTaGGCATCTTCAGTCTTTTGCATGCCGTGCTTGCTGTTCTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GISLQLCPVLSQVRD*ASSVFCMPCLLFSR Trigger: CCTTGAGAACAGCAAGCACGGCATGCAAAAGACTGAAGATGCCAAATCCCTTACCTGTGATAGAACAGGGCACAGCTGCAGTGAGATGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| 3UTR-3UTR GCA 90 bp | CAACGGGAAGGACGGCATCTCACTGCAGCTGTGCCCTGTTCTATCACAGGTAAGCTTCAGTCTTTTGCATaGCGTGCTTGCTGTTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: QREGRHLTAAVPCSITGKLQSFA*RACCSQ Trigger: TTGAGAACAGCAAGCACGGCATGCAAAAGACTGAAG...CTTACCTGTGATAGAACAGGGCACAGCTGCAGTGAGATGCCGTCCTTCCCGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| 3UTR TCA 72 bp | AGCATATTCACATATGTACAGCCAGGTCCCCAAGTATaGACGATACAGCCAACGGGAAGGACGGCATCTCAC | + |
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Preference number: 3 (lower is better) Translates to: SIFTYVQPGPQV*TIQPTGRTASH Trigger: GTGAGATGCCGTCCTTCCCGTTGGCTGTATCGTTCATACTTGGGGACCTGGCTGTACATATGTGAATATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| 3UTR-3UTR CAA 90 bp | GCTAGAGTCACTACAGAATCACTGACCAGCATATTCACATATGTACAGCCAGGTTCACAGGTAAGGGATTaGGCATCTTCAGTCTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: ARVTTESLTSIFTYVQPGSQVRD*ASSVFC Trigger: GCAAAAGACTGAAGATGCCAAATCCCTTACCTGTGA...ACCTGGCTGTACATATGTGAATATGCTGGTCAGTGATTCTGTAGTGACTCTAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| 3UTR-3UTR CAA 90 bp | ATTAGTCAGCAAACCCAAGGTTTGTATCACAACAGTGTAGCTAGAGTCACTACATCACAGGTAAGGGATTaGGCATCTTCAGTCTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: ISQQTQGLYHNSVARVTTSQVRD*ASSVFC Trigger: GCAAAAGACTGAAGATGCCAAATCCCTTACCTGTGA...TGTAGTGACTCTAGCTACACTGTTGTGATACAAACCTTGGGTTTGCTGACTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR TCA 90 bp | CAGCCAACGGGAAGGACGGCATCTCACTGCAGCTGTGCCCTGTTCTATCACAGGCATTCTGCCAGTCTGTaGTATACTTCCACACACCCG | + |
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Preference number: 4 (lower is better) Translates to: QPTGRTASHCSCALFYHRHSASL*YTSTHP Trigger: CGGGTGTGTGGAAGTATATCACAGACTGGCAGAATG...CCTGTGATAGAACAGGGCACAGCTGCAGTGAGATGCCGTCCTTCCCGTTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CCA 90 bp | GGTTTGTATCACAACAGTGTAGCTAGAGTCACTACAGAATCACTGACCAGCATAGCCACCACCCGGGCCTaGGCGGTAGGAGTAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLYHNSVARVTTESLTSIATTRA*AVGVGS Trigger: GCTGCCTACTCCTACCGCCCAGGCCCGGGTGGTGGC...TATGCTGGTCAGTGATTCTGTAGTGACTCTAGCTACACTGTTGTGATACAAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR TCA 90 bp | CAACGGGAAGGACGGCATCTCACTGCAGCTGTGCCCTGTTCTATCACAGGTAAGCATTCTGCCAGTCTGTaGTATACTTCCACACACCCG | + |
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Preference number: 4 (lower is better) Translates to: QREGRHLTAAVPCSITGKHSASL*YTSTHP Trigger: CGGGTGTGTGGAAGTATATCACAGACTGGCAGAATG...CTTACCTGTGATAGAACAGGGCACAGCTGCAGTGAGATGCCGTCCTTCCCGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR GCA 90 bp | GGGAAGGACGGCATCTCACTGCAGCTGTGCCCTGTTCTATCACAGGTAAGGGATATCTGGCCCCGTCCTTaGCTGTCAAATTTTCGGATG | + |
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Preference number: 4 (lower is better) Translates to: GKDGISLQLCPVLSQVRDIWPRP*LSNFRM Trigger: CATCCGAAAATTTGACAGGCAAGGACGGGGCCAGAT...ATCCCTTACCTGTGATAGAACAGGGCACAGCTGCAGTGAGATGCCGTCCTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CCA 90 bp | ATTAGTCAGCAAACCCAAGGTTTGTATCACAACAGTGTAGCTAGAGTCACTACAGCCACCACCCGGGCCTaGGCGGTAGGAGTAGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: ISQQTQGLYHNSVARVTTATTRA*AVGVGS Trigger: GCTGCCTACTCCTACCGCCCAGGCCCGGGTGGTGGC...TGTAGTGACTCTAGCTACACTGTTGTGATACAAACCTTGGGTTTGCTGACTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CCA 90 bp | CAACGGGAAGGACGGCATCTCACTGCAGCTGTGCCCTGTTCTATCACAGGTAAGAAGACGATGCAGCCCTaGATGAAGTCATCAAATGCG | + |
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Preference number: 4 (lower is better) Translates to: QREGRHLTAAVPCSITGKKTMQP*MKSSNA Trigger: CGCATTTGATGACTTCATCCAGGGCTGCATCGTCTT...CTTACCTGTGATAGAACAGGGCACAGCTGCAGTGAGATGCCGTCCTTCCCGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR GCA 90 bp | GAAGGACGGCATCTCACTGCAGCTGTGCCCTGTTCTATCACAGGTAAGGGATTTATCTGGCCCCGTCCTTaGCTGTCAAATTTTCGGATG | + |
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Preference number: 4 (lower is better) Translates to: EGRHLTAAVPCSITGKGFIWPRP*LSNFRM Trigger: CATCCGAAAATTTGACAGGCAAGGACGGGGCCAGAT...AAATCCCTTACCTGTGATAGAACAGGGCACAGCTGCAGTGAGATGCCGTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| 3UTR CAA 72 bp | CTGCAGCTGTGCCCTGTTCTATCACAGGTAAGGGATTaGGCATCTTCAGTCTTTTGCATGCCGTGCTTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LQLCPVLSQVRD*ASSVFCMPCLL Trigger: CAGCAAGCACGGCATGCAAAAGACTGAAGATGCCAAATCCCTTACCTGTGATAGAACAGGGCACAGCTGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR GCA 90 bp | GCTAGAGTCACTACAGAATCACTGACCAGCATATTCACATATGTACAGCCAGGTGATGAAGTCATCAAATaGGATCTGGCCCCGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: ARVTTESLTSIFTYVQPGDEVIK*DLAPSL Trigger: CAAGGACGGGGCCAGATCGCATTTGATGACTTCATC...ACCTGGCTGTACATATGTGAATATGCTGGTCAGTGATTCTGTAGTGACTCTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR GCA 90 bp | ACTACAGAATCACTGACCAGCATATTCACATATGTACAGCCAGGTCCCCAAGTAGATGAAGTCATCAAATaGGATCTGGCCCCGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TTESLTSIFTYVQPGPQVDEVIK*DLAPSL Trigger: CAAGGACGGGGCCAGATCGCATTTGATGACTTCATC...TACTTGGGGACCTGGCTGTACATATGTGAATATGCTGGTCAGTGATTCTGTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR TCA 90 bp | AGTCAGCAAACCCAAGGTTTGTATCACAACAGTGTAGCTAGAGTCACTACAGAACGATGCAGCCCTGGATaGAGTCATCAAATGCGATCT | + |
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Preference number: 4 (lower is better) Translates to: SQQTQGLYHNSVARVTTERCSPG*SHQMRS Trigger: AGATCGCATTTGATGACTTCATCCAGGGCTGCATCG...TTCTGTAGTGACTCTAGCTACACTGTTGTGATACAAACCTTGGGTTTGCTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR TCA 90 bp | CAAACCCAAGGTTTGTATCACAACAGTGTAGCTAGAGTCACTACAGAATCACTGCGATGCAGCCCTGGATaGAGTCATCAAATGCGATCT | + |
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Preference number: 4 (lower is better) Translates to: QTQGLYHNSVARVTTESLRCSPG*SHQMRS Trigger: AGATCGCATTTGATGACTTCATCCAGGGCTGCATCG...CAGTGATTCTGTAGTGACTCTAGCTACACTGTTGTGATACAAACCTTGGGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CCA 90 bp | GCTAGAGTCACTACAGAATCACTGACCAGCATATTCACATATGTACAGCCAGGTTCTTTATCAACCCGCTaGAAGACGTTCCACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: ARVTTESLTSIFTYVQPGSLSTR*KTFHRK Trigger: CTTCCTGTGGAACGTCTTCCAGCGGGTTGATAAAGA...ACCTGGCTGTACATATGTGAATATGCTGGTCAGTGATTCTGTAGTGACTCTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CCA 90 bp | CAAACCCAAGGTTTGTATCACAACAGTGTAGCTAGAGTCACTACAGAATCACTGTCTTTATCAACCCGCTaGAAGACGTTCCACAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QTQGLYHNSVARVTTESLSLSTR*KTFHRK Trigger: CTTCCTGTGGAACGTCTTCCAGCGGGTTGATAAAGA...CAGTGATTCTGTAGTGACTCTAGCTACACTGTTGTGATACAAACCTTGGGTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR TCA 90 bp | TATTCACATATGTACAGCCAGGTCCCCAAGTATGAACGATACAGCCAACGGGAAAAACATAGAAATGATTaGCCTCACAGTCACTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: YSHMYSQVPKYERYSQREKHRND*PHSHWV Trigger: AACCCAGTGACTGTGAGGTCAATCATTTCTATGTTT...TTCCCGTTGGCTGTATCGTTCATACTTGGGGACCTGGCTGTACATATGTGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR TCA 90 bp | ACTACAGAATCACTGACCAGCATATTCACATATGTACAGCCAGGTCCCCAAGTATGTCAAATTTTCGGATaGGGATGTCATGGAACTGAT | + |
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Preference number: 4 (lower is better) Translates to: TTESLTSIFTYVQPGPQVCQIFG*GCHGTD Trigger: ATCAGTTCCATGACATCCTCATCCGAAAATTTGACA...TACTTGGGGACCTGGCTGTACATATGTGAATATGCTGGTCAGTGATTCTGTAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR TCA 90 bp | AGTCAGCAAACCCAAGGTTTGTATCACAACAGTGTAGCTAGAGTCACTACAGAAAAACATAGAAATGATTaGCCTCACAGTCACTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: SQQTQGLYHNSVARVTTEKHRND*PHSHWV Trigger: AACCCAGTGACTGTGAGGTCAATCATTTCTATGTTT...TTCTGTAGTGACTCTAGCTACACTGTTGTGATACAAACCTTGGGTTTGCTGACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS TCA 90 bp | CATCAAATGCGATCTGGCCCCGTCCTTGCCTGTCAAATTTTCGGATaGGGATGTCATGGAACTGATCAGAGAGCCGGTAGCCTGAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: HQMRSGPVLACQIFG*GCHGTDQRAGSLRV Trigger: CACTCTCAGGCTACCGGCTCTCTGATCAGTTCCATGACATCCTCATCCGAAAATTTGACAGGCAAGGACGGGGCCAGATCGCATTTGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222759.2 |
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| CDS CCA 90 bp | CTCTGCAAGACGATGCAGCCCTGGATGAAGTCATCAAATGCGATCTaGCCCCGTCCTTGCCTGTCAAATTTTCGGATGAGGATGTCATGG | + |
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Preference number: 5 (lower is better) Translates to: LCKTMQPWMKSSNAI*PRPCLSNFRMRMSW Trigger: CCATGACATCCTCATCCGAAAATTTGACAGGCAAGGACGGGGCCAGATCGCATTTGATGACTTCATCCAGGGCTGCATCGTCTTGCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CAA 90 bp | GAAGGACGGCATCTCACTGCAGCTGTGCCCTGTTCTATCACAGGTAAGGGATTTGATCTGGCCCCGTCCTaGCCTGTCAAATTTTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: EGRHLTAAVPCSITGKGFDLAPS*PVKFSD Trigger: ATCCGAAAATTTGACAGGCAAGGACGGGGCCAGATC...AAATCCCTTACCTGTGATAGAACAGGGCACAGCTGCAGTGAGATGCCGTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS TCA 90 bp | GGAACTGATCAGAGAGCCGGTAGCCAAAACCTGAGAGTGCTTGTTTaGGCTCGTTCTTGTCAATCATCCCAGAGTTGTCCCTGTCGTAGG | + |
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Preference number: 5 (lower is better) Translates to: GTDQRAGSQNLRVLV*ARSCQSSQSCPCRR Trigger: CCTACGACAGGGACAACTCTGGGATGATTGACAAGAACGAGCTCAAACAAGCACTCTCAGGTTTTGGCTACCGGCTCTCTGATCAGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022060.7 |
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| CDS TCA 90 bp | TGTCATGGAACTGATCAGAGAGCCGGTAGCCTGAGAGTGCTTGTTTaGGCTCGTTCTTGTCAATCATCCCAGAGTTGTCCCTGTCGTAGG | + |
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Preference number: 5 (lower is better) Translates to: CHGTDQRAGSLRVLV*ARSCQSSQSCPCRR Trigger: CCTACGACAGGGACAACTCTGGGATGATTGACAAGAACGAGCTCAAACAAGCACTCTCAGGCTACCGGCTCTCTGATCAGTTCCATGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222759.2 |
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| CDS GCA 90 bp | TGTCAACCTCTGCAAGACGATGCAGCCCTGGATGAAGTCATCAAATaGGATCTGGCCCCGTCCTTGCCTGTCAAATTTTCGGATGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: CQPLQDDAALDEVIK*DLAPSLPVKFSDED Trigger: ATCCTCATCCGAAAATTTGACAGGCAAGGACGGGGCCAGATCGCATTTGATGACTTCATCCAGGGCTGCATCGTCTTGCAGAGGTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CAA 90 bp | AACGGGAAGGACGGCATCTCACTGCAGCTGTGCCCTGTTCTATCACAGGTAAGGAAGTTCACACCAGCCTaGTTTTCTCGGTCAAACATA | + |
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Preference number: 5 (lower is better) Translates to: NGKDGISLQLCPVLSQVRKFTPA*FSRSNI Trigger: TATGTTTGACCGAGAAAACAAGGCTGGTGTGAACTT...CCTTACCTGTGATAGAACAGGGCACAGCTGCAGTGAGATGCCGTCCTTCCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CAA 90 bp | GGGATTTGGCATCTTCAGTCTTTTGCATGCCGTGCTTGCTGTTCTCAAGGCCTGAAGTTCACACCAGCCTaGTTTTCTCGGTCAAACATA | + |
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Preference number: 5 (lower is better) Translates to: GIWHLQSFACRACCSQGLKFTPA*FSRSNI Trigger: TATGTTTGACCGAGAAAACAAGGCTGGTGTGAACTT...CAGGCCTTGAGAACAGCAAGCACGGCATGCAAAAGACTGAAGATGCCAAATCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CAA 90 bp | AGTCAGCAAACCCAAGGTTTGTATCACAACAGTGTAGCTAGAGTCACTACAGAATGTTTGAGCTCGTTCTaGTCAATCATCCCAGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: SQQTQGLYHNSVARVTTECLSSF*SIIPEL Trigger: CAACTCTGGGATGATTGACAAGAACGAGCTCAAACA...TTCTGTAGTGACTCTAGCTACACTGTTGTGATACAAACCTTGGGTTTGCTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS-3UTR CAA 90 bp | CAAACCCAAGGTTTGTATCACAACAGTGTAGCTAGAGTCACTACAGAATCACTGTGTTTGAGCTCGTTCTaGTCAATCATCCCAGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: QTQGLYHNSVARVTTESLCLSSF*SIIPEL Trigger: CAACTCTGGGATGATTGACAAGAACGAGCTCAAACA...CAGTGATTCTGTAGTGACTCTAGCTACACTGTTGTGATACAAACCTTGGGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS TCA 72 bp | TGTCTGTCAACCTCTGCAAGACGATGCAGCCCTGGATaGAGTCATCAAATGCGATCTGGCCCCGTCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: CLSTSARRCSPG*SHQMRSGPVLA Trigger: GGCAAGGACGGGGCCAGATCGCATTTGATGACTTCATCCAGGGCTGCATCGTCTTGCAGAGGTTGACAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS GCA 72 bp | CTGCAAGACGATGCAGCCCTGGATGAAGTCATCAAATaGGATCTGGCCCCGTCCTTGCCTGTCAAATTTTCG | + |
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Preference number: 6 (lower is better) Translates to: LQDDAALDEVIK*DLAPSLPVKFS Trigger: CGAAAATTTGACAGGCAAGGACGGGGCCAGATCGCATTTGATGACTTCATCCAGGGCTGCATCGTCTTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS CCA 72 bp | ACGATGCAGCCCTGGATGAAGTCATCAAATGCGATCTaGCCCCGTCCTTGCCTGTCAAATTTTCGGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: TMQPWMKSSNAI*PRPCLSNFRMR Trigger: CCTCATCCGAAAATTTGACAGGCAAGGACGGGGCCAGATCGCATTTGATGACTTCATCCAGGGCTGCATCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS TCA 72 bp | CAGAGAGCCGGTAGCCAAAACCTGAGAGTGCTTGTTTaGGCTCGTTCTTGTCAATCATCCCAGAGTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: QRAGSQNLRVLV*ARSCQSSQSCP Trigger: GGGACAACTCTGGGATGATTGACAAGAACGAGCTCAAACAAGCACTCTCAGGTTTTGGCTACCGGCTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022060.7 |
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| CDS TCA 72 bp | CCTGAATCCAGCCATCCTGATCCGTGTCATAGCGTCTaGATATGTCTGTCAACCTCTGCAAGACGATGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PESSHPDPCHSV*ICLSTSARRCS Trigger: GCTGCATCGTCTTGCAGAGGTTGACAGACATATTCAGACGCTATGACACGGATCAGGATGGCTGGATTCAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS TCA 72 bp | ACTGATCAGAGAGCCGGTAGCCTGAGAGTGCTTGTTTaGGCTCGTTCTTGTCAATCATCCCAGAGTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: TDQRAGSLRVLV*ARSCQSSQSCP Trigger: GGGACAACTCTGGGATGATTGACAAGAACGAGCTCAAACAAGCACTCTCAGGCTACCGGCTCTCTGATCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222759.2 |
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| CDS CAA 90 bp | GATGCAGCCCTGGATGAAGTCATCAAATGCGATCTGGCCCCGTCCTaGCCTGTCAAATTTTCGGATGAGGATGTCATGGAACTGATCAGA | + |
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Preference number: 6 (lower is better) Translates to: DAALDEVIKCDLAPS*PVKFSDEDVMELIR Trigger: TCTGATCAGTTCCATGACATCCTCATCCGAAAATTTGACAGGCAAGGACGGGGCCAGATCGCATTTGATGACTTCATCCAGGGCTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS GCA 72 bp | TGGATGAAGTCATCAAATGCGATCTGGCCCCGTCCTTaGCTGTCAAATTTTCGGATGAGGATGTCATGGAAC | + |
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Preference number: 6 (lower is better) Translates to: WMKSSNAIWPRP*LSNFRMRMSWN Trigger: GTTCCATGACATCCTCATCCGAAAATTTGACAGGCAAGGACGGGGCCAGATCGCATTTGATGACTTCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS CAA 72 bp | CTGGATGAAGTCATCAAATGCGATCTGGCCCCGTCCTaGCCTGTCAAATTTTCGGATGAGGATGTCATGGAA | + |
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Preference number: 6 (lower is better) Translates to: LDEVIKCDLAPS*PVKFSDEDVME Trigger: TTCCATGACATCCTCATCCGAAAATTTGACAGGCAAGGACGGGGCCAGATCGCATTTGATGACTTCATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS CAA 72 bp | CACACACCCGTGAATTCACTGAAGTTCACACCAGCCTaGTTTTCTCGGTCAAACATAGAAATGATTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: HTPVNSLKFTPA*FSRSNIEMIDL Trigger: GAGGTCAATCATTTCTATGTTTGACCGAGAAAACAAGGCTGGTGTGAACTTCAGTGAATTCACGGGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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| CDS CAA 90 bp | ATATACTTCCACACACCCGTGAATTCACTGAAGTTCACACCAGCCTaGTTTTCTCGGTCAAACATAGAAATGATTGACCTCACAGTCACT | + |
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Preference number: 6 (lower is better) Translates to: IYFHTPVNSLKFTPA*FSRSNIEMIDLTVT Trigger: AGTGACTGTGAGGTCAATCATTTCTATGTTTGACCGAGAAAACAAGGCTGGTGTGAACTTCAGTGAATTCACGGGTGTGTGGAAGTATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022060.7 ENSMUST00000222759.2 |
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