Pregenerated sensors for PDCD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024975Ensembl transcript IDs: ENSMUST00000025931.14, ENSMUST00000074371.13, ENSMUST00000165617.3, ENSMUST00000237060.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCAGCCTGAAAACATTCCTCCACAAATCTCTCAAGAACAGAGTATaGGTGTGGGACATCCAGATTAATGTCTGGGATTTCATTGTAAAT | + |
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Preference number: 1 (lower is better) Translates to: SSLKTFLHKSLKNRV*VWDIQINVWDFIVN Trigger: ATTTACAATGAAATCCCAGACATTAATCTGGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| 3UTR TCA 90 bp | CTTGATGGACAAAGATCACGGAGTTGTTTGGAAATTATTCCAGCCTaGAAACATTCCTCCACAAATCTCTCAAGAACAGAGTATGAGTGT | + |
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Preference number: 1 (lower is better) Translates to: LDGQRSRSCLEIIPA*KHSSTNLSRTEYEC Trigger: ACACTCATACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTCCAAACAACTCCGTGATCTTTGTCCATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAACACCCACACTTCGGTaGTTCCTCTTCTGTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCLLSKHSISTAATPTLR*FLFCPS Trigger: GGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGT...TGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| 3UTR-3UTR CCA 90 bp | GGAGCGGCAGTCATACATGAACGTGAAACTTGGAATGATCAGGTCCTAAACATGACACCCACACTTCGGTaGTTCCTCTTCTGTCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GAAVIHERETWNDQVLNMTPTLR*FLFCPS Trigger: GGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGT...CATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCCATGAACGTGAAACTTaGAATGATCAGGTCCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: SVCVCVCVFTLKAQHFHSHERET*NDQVLN Trigger: GTTTAGGACCTGATCATTCCAAGTTTCACGTTCATG...GCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCACATGAACGTGAAACTTaGAATGATCAGGTCCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CVCVCVCLLSKHSISTAAHERET*NDQVLN Trigger: GTTTAGGACCTGATCATTCCAAGTTTCACGTTCATG...TGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| 3UTR CCA 72 bp | AAGAAAGGAGCGGCAGTCATACATGAACGTGAAACTTaGAATGATCAGGTCCTAAACATGGCACTTAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: KKGAAVIHERET*NDQVLNMALRK Trigger: CTTTCTAAGTGCCATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCCTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| 3UTR TCA 72 bp | AAAACATTCCTCCACAAATCTCTCAAGAACAGAGTATaGGTGTGGGACATCCAGATTAATGTCTGGGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: KTFLHKSLKNRV*VWDIQINVWDF Trigger: GAAATCCCAGACATTAATCTGGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAGACACCTGTCCAGGTGTaGCCCAGACACCCTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYSQSTAFPQQQTPVQV*PRHPCR Trigger: GCGGCAAGGGTGTCTGGGGCACACCTGGACAGGTGT...CTGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | GAGTTGCTGTGCTCAGTAGCTCTCAGGTTTAAGACGGCCTCCATCTCCTTCACTCACTTCCATTGTCACTaGCTGAGTCTCCTCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ELLCSVALRFKTASISFTHFHCH*LSLLGQ Trigger: CTGGCCGAGGAGACTCAGTCAGTGACAATGGAAGTG...AGTGAAGGAGATGGAGGCCGTCTTAAACCTGAGAGCTACTGAGCACAGCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR GCA 90 bp | AGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCACACCTGTCCAGGTGTaGCCCAGACACCCTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SVCVCVCVFTLKAQHFHSTPVQV*PRHPCR Trigger: GCGGCAAGGGTGTCTGGGGCACACCTGGACAGGTGT...GCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR GCA 90 bp | AGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCGCCCACCAACTGCGGTaGCCTAGGAGTGTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVCVCVCVFTLKAQHFHSAHQLR*PRSVQG Trigger: GCCTTGGACACTCCTAGGGCACCGCAGTTGGTGGGC...GCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR GCA 90 bp | TGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCATGCCCCAGACACCCTTaGCGCCTGCACCACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCLLSKHSISTAACPRHP*RLHHLS Trigger: AGAAAGGTGGTGCAGGCGGCAAGGGTGTCTGGGGCA...TGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR GCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTTGCCCCAGACACCCTTaGCGCCTGCACCACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLICPRHP*RLHHLS Trigger: AGAAAGGTGGTGCAGGCGGCAAGGGTGTCTGGGGCA...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | CTCAGGTTTAAGACGGCCTCCATCTCCTTCACTTACAAAACGCTTTCTTCCCCTGCCAGAGTCCCGGGATaGATTTTTCCGCAGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRFKTASISFTYKTLSSPARVPG*IFPQSS Trigger: AGACGACTGCGGAAAAATTCATCCCGGGACTCTGGC...AGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAGTCCATTGTCACTGACTaGGTCTCCTCGGCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYSQSTAFPQQQSIVTD*VSSARV Trigger: GACTCTGGCCGAGGAGACTCAGTCAGTGACAATGGA...CTGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR GCA 90 bp | CCCTTGATGGACAAAGATCACGGAGTTGTTTGGAAATTATTCCAGCCTGAAAACACACCTGTCCAGGTGTaGCCCAGACACCCTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLMDKDHGVVWKLFQPENTPVQV*PRHPCR Trigger: GCGGCAAGGGTGTCTGGGGCACACCTGGACAGGTGT...GTTTTCAGGCTGGAATAATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGTTTAAGACGGCCTCCATCTCCTTCACTTACAAAACGCTTTCTTCCCCTGGTCAGAAAGCAGCTTaGATGTCATCTCCCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRFKTASISFTYKTLSSPGQKAA*MSSPGG Trigger: GCCACCGGGAGATGACATCCAAGCTGCTTTCTGACC...AGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAGTCCGCTTCCCGCCTTTaGACATACTCAGGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVYSQSTAFPQQQSASRL*TYSGAQ Trigger: CTGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGA...CTGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCCAGAGTCCCGGGATaGATTTTTCCGCAGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCLLSKHSISTAARVPG*IFPQSS Trigger: AGACGACTGCGGAAAAATTCATCCCGGGACTCTGGC...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTCACTTCCATTGTCACTaGCTGAGTCTCCTCGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLIHFHCH*LSLLGQ Trigger: CTGGCCGAGGAGACTCAGTCAGTGACAATGGAAGTG...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR GCA 90 bp | TCCACAAATCTCTCAAGAACAGAGTATGAGTGTGGGACATCCAGATTAATGTCTGCCCACCAACTGCGGTaGCCTAGGAGTGTCCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STNLSRTEYECGTSRLMSAHQLR*PRSVQG Trigger: GCCTTGGACACTCCTAGGGCACCGCAGTTGGTGGGC...AGACATTAATCTGGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR CCA 90 bp | CTCAGGTTTAAGACGGCCTCCATCTCCTTCACTTACAAAACGCTTTCTTCCCCTACCTTCCTTTTGGACTaGTGGGCACAGCAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRFKTASISFTYKTLSSPTFLLD*WAQQLH Trigger: GTGGAGTTGCTGTGCCCACCAGTCCAAAAGGAAGGT...AGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR CCA 90 bp | AGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCTGCACCACCTTTCTTTaGCAGCCCCCTTCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVCVCVCVFTLKAQHFHSCTTFL*QPPSFP Trigger: GGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCA...GCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCATGCACCACCTTTCTTTaGCAGCCCCCTTCCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCLLSKHSISTAACTTFL*QPPSFP Trigger: GGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCA...TGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGGTCAGAAAGCAGCTTaGATGTCATCTCCCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCLLSKHSISTAGQKAA*MSSPGG Trigger: GCCACCGGGAGATGACATCCAAGCTGCTTTCTGACC...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAGGTCAGAAAGCAGCTTaGATGTCATCTCCCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCLLSKHSISTAAGQKAA*MSSPGG Trigger: GCCACCGGGAGATGACATCCAAGCTGCTTTCTGACC...TGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | AGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCGCTCTAGCAATAAACTaGCCCACCAACTGCGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SVCVCVCVFTLKAQHFHSALAIN*PTNCGA Trigger: GGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGC...GCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | GGAGCGGCAGTCATACATGAACGTGAAACTTGGAATGATCAGGTCCTAAACATGACCTTCCTTTTGGACTaGTGGGCACAGCAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GAAVIHERETWNDQVLNMTFLLD*WAQQLH Trigger: GTGGAGTTGCTGTGCCCACCAGTCCAAAAGGAAGGT...CATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | AAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACATCCATTGTCACTGACTaGGTCTCCTCGGCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVCVCVCVCLLSKHSISTSIVTD*VSSARV Trigger: GACTCTGGCCGAGGAGACTCAGTCAGTGACAATGGA...TGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTACGCTTTCTTCCCCTTaGTGGACAAAGATCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLITLSSP*WTKITE Trigger: CTCCGTGATCTTTGTCCATCAAGGGGAAGAAAGCGT...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAACGCTTTCTTCCCCTTaGTGGACAAAGATCACGGAG | + |
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Preference number: 4 (lower is better) Translates to: CVCVCVCLLSKHSISTAATLSSP*WTKITE Trigger: CTCCGTGATCTTTGTCCATCAAGGGGAAGAAAGCGT...TGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCATTCCTTTTGGACTGGTaGGCACAGCAACTCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCLLSKHSISTAFLLDW*AQQLHF Trigger: GAAGTGGAGTTGCTGTGCCCACCAGTCCAAAAGGAA...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTTTCCTTTTGGACTGGTaGGCACAGCAACTCCACTTC | + |
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Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLIFLLDW*AQQLHF Trigger: GAAGTGGAGTTGCTGTGCCCACCAGTCCAAAAGGAA...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCATTCCTTTCCCAGATCTaGACCGCCTATCTAGCAACC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCLLSKHSISTAFLSQI*TAYLAT Trigger: GGTTGCTAGATAGGCGGTCCAGATCTGGGAAAGGAA...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | CCCTTGATGGACAAAGATCACGGAGTTGTTTGGAAATTATTCCAGCCTGAAAACGCTCTAGCAATAAACTaGCCCACCAACTGCGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PLMDKDHGVVWKLFQPENALAIN*PTNCGA Trigger: GGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGC...GTTTTCAGGCTGGAATAATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR TCA 90 bp | GGAGCGGCAGTCATACATGAACGTGAAACTTGGAATGATCAGGTCCTAAACATGATCTCTTTAACAAGGTaGTTGACAGGCTGTTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GAAVIHERETWNDQVLNMISLTR*LTGCCP Trigger: CGGGCAACAGCCTGTCAATCACCTTGTTAAAGAGAT...CATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTATCTCTTTAACAAGGTaGTTGACAGGCTGTTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLIISLTR*LTGCCP Trigger: CGGGCAACAGCCTGTCAATCACCTTGTTAAAGAGAT...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAGCTCAAGAACAGAGTATaGGTGTGGGACATCCAGATT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVYSQSTAFPQQQLKNRV*VWDIQI Trigger: AATCTGGATGTCCCACACTCATACTCTGTTCTTGAG...CTGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | CTCAGGTTTAAGACGGCCTCCATCTCCTTCACTTACAAAACGCTTTCTTCCCCTAATTGTCAGGGTCAGTaGGGTTCACATTCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: LRFKTASISFTYKTLSSPNCQGQ*GSHSVS Trigger: AGACACTGAATGTGAACCCCACTGACCCTGACAATT...AGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR CCA 90 bp | AAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAACCTTCCTTTTGGACTaGTGGGCACAGCAACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVCVCVCVCLLSKHSISTTFLLD*WAQQLH Trigger: GTGGAGTTGCTGTGCCCACCAGTCCAAAAGGAAGGT...TGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CCA 90 bp | TCCACAAATCTCTCAAGAACAGAGTATGAGTGTGGGACATCCAGATTAATGTCTTGCACCACCTTTCTTTaGCAGCCCCCTTCCTTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: STNLSRTEYECGTSRLMSCTTFL*QPPSFP Trigger: GGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCA...AGACATTAATCTGGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR TCA 90 bp | AACAAAAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTGCCAGAGTCCCGGGATaGATTTTTCCGCAGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKKCVCVCVCVYSQSTAFARVPG*IFPQSS Trigger: AGACGACTGCGGAAAAATTCATCCCGGGACTCTGGC...AAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | AACAAAAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCACTTCCATTGTCACTaGCTGAGTCTCCTCGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NKKCVCVCVCVYSQSTAFHFHCH*LSLLGQ Trigger: CTGGCCGAGGAGACTCAGTCAGTGACAATGGAAGTG...AAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR TCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTCTCAAGAACAGAGTATaGGTGTGGGACATCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLILKNRV*VWDIQI Trigger: AATCTGGATGTCCCACACTCATACTCTGTTCTTGAG...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTAATTGTCAGGGTCAGTaGGGTTCACATTCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLINCQGQ*GSHSVS Trigger: AGACACTGAATGTGAACCCCACTGACCCTGACAATT...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CCA 90 bp | AACAAAAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTGCTCTAGCAATAAACTaGCCCACCAACTGCGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NKKCVCVCVCVYSQSTAFALAIN*PTNCGA Trigger: GGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGC...AAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CCA 90 bp | AACAAAAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTTCCGCTTCCCGCCTTTaGACATACTCAGGAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: NKKCVCVCVCVYSQSTAFSASRL*TYSGAQ Trigger: CTGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGA...AAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTGTCGTCATCATAGTTTaGATCTTTCACATCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLIVVIIV*IFHIHL Trigger: GAGGTGGATGTGAAAGATCCAAACTATGATGACGAC...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR TCA 90 bp | CTCAGGTTTAAGACGGCCTCCATCTCCTTCACTTACAAAACGCTTTCTTCCCCTAATCTAAGATCATCTTaGATGCACTTTCTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRFKTASISFTYKTLSSPNLRSS*MHFLQL Trigger: CAACTGGAGAAAGTGCATTCAAGATGATCTTAGATT...AGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
||
| CDS-3UTR CCA 90 bp | GGAAATTATTCCAGCCTGAAAACATTCCTCCACAAATCTCTCAAGAACAGAGTATTCCTTTCCCAGATCTaGACCGCCTATCTAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GNYSSLKTFLHKSLKNRVFLSQI*TAYLAT Trigger: GGTTGCTAGATAGGCGGTCCAGATCTGGGAAAGGAA...TACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTAATCTAAGATCATCTTaGATGCACTTTCTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLINLRSS*MHFLQL Trigger: CAACTGGAGAAAGTGCATTCAAGATGATCTTAGATT...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR TCA 90 bp | GGAGCGGCAGTCATACATGAACGTGAAACTTGGAATGATCAGGTCCTAAACATGGAAATTATTCCAGCCTaGAAACATTCCTCCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GAAVIHERETWNDQVLNMEIIPA*KHSSTN Trigger: ATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTC...CATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGTCGTCATCATAGTTTaGATCTTTCACATCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVCVCVCVCLLSKHSISTVVIIV*IFHIHL Trigger: GAGGTGGATGTGAAAGATCCAAACTATGATGACGAC...TGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCATCGTCTTTTGGCTTTTaGATTGATTCTAGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCLLSKHSISTASSFGF*IDSSFI Trigger: AATGAAGCTAGAATCAATGCAAAAGCCAAAAGACGA...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR GCA 90 bp | AGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCTCGTCTTTTGGCTTTTaGATTGATTCTAGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SVCVCVCVFTLKAQHFHSSSFGF*IDSSFI Trigger: AATGAAGCTAGAATCAATGCAAAAGCCAAAAGACGA...GCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CCA 90 bp | AACAAAAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTAATTGTCAGGGTCAGTaGGGTTCACATTCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NKKCVCVCVCVYSQSTAFNCQGQ*GSHSVS Trigger: AGACACTGAATGTGAACCCCACTGACCCTGACAATT...AAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CCA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTCTAAAACCATTACAATaGCTTCATATACAAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSEHPHFGGSSSVPPLILKPLQ*LHIQAR Trigger: ACGAGCTTGTATATGAAGCCATTGTAATGGTTTTAG...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCACTAAAACCATTACAATaGCTTCATATACAAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVCLLSKHSISTALKPLQ*LHIQAR Trigger: ACGAGCTTGTATATGAAGCCATTGTAATGGTTTTAG...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR TCA 90 bp | AAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAAATCTAAGATCATCTTaGATGCACTTTCTCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVCVCVCVCLLSKHSISTNLRSS*MHFLQL Trigger: CAACTGGAGAAAGTGCATTCAAGATGATCTTAGATT...TGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR TCA 90 bp | AAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGAAATTATTCCAGCCTaGAAACATTCCTCCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: KVCVCVCVCLLSKHSISTEIIPA*KHSSTN Trigger: ATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTC...TGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CCA 90 bp | GGAAATTATTCCAGCCTGAAAACATTCCTCCACAAATCTCTCAAGAACAGAGTAGTCGTCATCATAGTTTaGATCTTTCACATCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GNYSSLKTFLHKSLKNRVVVIIV*IFHIHL Trigger: GAGGTGGATGTGAAAGATCCAAACTATGATGACGAC...TACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
||
| CDS-3UTR GCA 90 bp | TTTCTTCCCCTTGATGGACAAAGATCACGGAGTTGTTTGGAAATTATTCCAGCCTCGTCTTTTGGCTTTTaGATTGATTCTAGCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: FLPLDGQRSRSCLEIIPASSFGF*IDSSFI Trigger: AATGAAGCTAGAATCAATGCAAAAGCCAAAAGACGA...GGCTGGAATAATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGGGAAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
||
| CDS CCA 90 bp | CGCCTGCACCACCTTTCTTTGGCAGCCCCCTTCCTTTCCCAGATCTaGACCGCCTATCTAGCAACCTTCCTTTTGGACTGGTGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: RLHHLSLAAPFLSQI*TAYLATFLLDWWAQ Trigger: CTGTGCCCACCAGTCCAAAAGGAAGGTTGCTAGATAGGCGGTCCAGATCTGGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCAGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 ENSMUST00000237060.2 |
||
| CDS GCA 90 bp | AAGATTCCATCTCCAACAGCTCTAGCAATAAACTGGCCCACCAACTaGGGTGCCCTAGGAGTGTCCAAGGCTAGCTCAGGGAGATCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KIPSPTALAINWPTN*GALGVSKASSGRSF Trigger: GAAGGATCTCCCTGAGCTAGCCTTGGACACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGCTGTTGGAGATGGAATCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 ENSMUST00000237060.2 |
||
| CDS-3UTR CAA 90 bp | GAGTTGCTGTGCTCAGTAGCTCTCAGGTTTAAGACGGCCTCCATCTCCTTCACTAGGTCAGAAAGCAGCTaGGATGTCATCTCCCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELLCSVALRFKTASISFTRSESS*DVISRW Trigger: CCACCGGGAGATGACATCCAAGCTGCTTTCTGACCT...AGTGAAGGAGATGGAGGCCGTCTTAAACCTGAGAGCTACTGAGCACAGCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCGTGATTGACAGGCTGTaGCCCGCCTCCAGATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVCVCVCVFTLKAQHFHSVIDRL*PASRSP Trigger: TGGGGATCTGGAGGCGGGCAACAGCCTGTCAATCAC...GCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGCAGTCATACATGAACGTGAAACTTGGAATGATCAGGTCCTAAACATGGTGATTGACAGGCTGTaGCCCGCCTCCAGATCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GAAVIHERETWNDQVLNMVIDRL*PASRSP Trigger: TGGGGATCTGGAGGCGGGCAACAGCCTGTCAATCAC...CATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | AGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCCTGCACCACCTTTCTTaGGCAGCCCCCTTCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVCVCVCVFTLKAQHFHSLHHLS*AAPFLS Trigger: GGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCAG...GCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAGTTCCGCTTCCCGCCTTaGGACATACTCAGGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVYSQSTAFPQQQFRFPP*DILRST Trigger: TGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGAA...CTGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | CTCAGGTTTAAGACGGCCTCCATCTCCTTCACTTACAAAACGCTTTCTTCCCCTCTAGCAACCTTCCTTTaGGACTGGTGGGCACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LRFKTASISFTYKTLSSPLATFL*DWWAQQ Trigger: TTGCTGTGCCCACCAGTCCAAAAGGAAGGTTGCTAG...AGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTAGGTCAGAAAGCAGCTaGGATGTCATCTCCCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSEHPHFGGSSSVPPLIRSESS*DVISRW Trigger: CCACCGGGAGATGACATCCAAGCTGCTTTCTGACCT...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAAGGTCAGAAAGCAGCTaGGATGTCATCTCCCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCLLSKHSISTARSESS*DVISRW Trigger: CCACCGGGAGATGACATCCAAGCTGCTTTCTGACCT...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAGACCGCTTCACTTCCATaGTCACTGACTGAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVYSQSTAFPQQQTASLP*SLTESP Trigger: AGGAGACTCAGTCAGTGACAATGGAAGTGAAGCGGT...CTGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCACTAGCAACCTTCCTTTaGGACTGGTGGGCACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCLLSKHSISTALATFL*DWWAQQ Trigger: TTGCTGTGCCCACCAGTCCAAAAGGAAGGTTGCTAG...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | GAGTTGCTGTGCTCAGTAGCTCTCAGGTTTAAGACGGCCTCCATCTCCTTCACTGGTCGTCATCATAGTTaGGATCTTTCACATCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ELLCSVALRFKTASISFTGRHHS*DLSHPP Trigger: AGGTGGATGTGAAAGATCCAAACTATGATGACGACC...AGTGAAGGAGATGGAGGCCGTCTTAAACCTGAGAGCTACTGAGCACAGCAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
||
| CDS GCA 90 bp | GGAGATCCTTCAGCAACTTGTCAAATGACTTTTCCACGTCATTTGTaGTCATCACCGTCCCGCAAAGGTCAGAAAGCAGCTTGGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GDPSATCQMTFPRHL*SSPSRKGQKAAWMS Trigger: TGACATCCAAGCTGCTTTCTGACCTTTGCGGGACGGTGATGAGCACAAATGACGTGGAAAAGTCATTTGACAAGTTGCTGAAGGATCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 ENSMUST00000237060.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAAGAGAGTCGCTTAAATaGTCAGGGTCAGTGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCLLSKHSISTARESLK*SGSVGF Trigger: GAACCCCACTGACCCTGACAATTTAAGCGACTCTCT...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | AGCTTATCAGAACACCCACACTTCGGTGGTTCCTCTTCTGTCCCTCCATTAATTACCGCTTCACTTCCATaGTCACTGACTGAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLSEHPHFGGSSSVPPLITASLP*SLTESP Trigger: AGGAGACTCAGTCAGTGACAATGGAAGTGAAGCGGT...AATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | TCCACAAATCTCTCAAGAACAGAGTATGAGTGTGGGACATCCAGATTAATGTCTCTGCACCACCTTTCTTaGGCAGCCCCCTTCCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: STNLSRTEYECGTSRLMSLHHLS*AAPFLS Trigger: GGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCAG...AGACATTAATCTGGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACATTCCGCTTCCCGCCTTaGGACATACTCAGGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KVCVCVCVCLLSKHSISTFRFPP*DILRST Trigger: TGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGAA...TGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACACTAGCAACCTTCCTTTaGGACTGGTGGGCACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: KVCVCVCVCLLSKHSISTLATFL*DWWAQQ Trigger: TTGCTGTGCCCACCAGTCCAAAAGGAAGGTTGCTAG...TGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGCAGGGTCGTCATCATAGTTaGGATCTTTCACATCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVYSQSTAFPQQQGRHHS*DLSHPP Trigger: AGGTGGATGTGAAAGATCCAAACTATGATGACGACC...CTGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | CCCTTGATGGACAAAGATCACGGAGTTGTTTGGAAATTATTCCAGCCTGAAAACAGAGAGTCGCTTAAATaGTCAGGGTCAGTGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLMDKDHGVVWKLFQPENRESLK*SGSVGF Trigger: GAACCCCACTGACCCTGACAATTTAAGCGACTCTCT...GTTTTCAGGCTGGAATAATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
||
| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAGGTCGTCATCATAGTTaGGATCTTTCACATCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCLLSKHSISTAGRHHS*DLSHPP Trigger: AGGTGGATGTGAAAGATCCAAACTATGATGACGACC...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGCAGTCATACATGAACGTGAAACTTGGAATGATCAGGTCCTAAACATGTCTCCGCAACTTCATTaGTATCTCCATGCTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GAAVIHERETWNDQVLNMSPQLH*YLHAQS Trigger: ACTTTGAGCATGGAGATACAAATGAAGTTGCGGAGA...CATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | GGAGCGGCAGTCATACATGAACGTGAAACTTGGAATGATCAGGTCCTAAACATGAGATCCTTCAGCAACTaGTCAAATGACTTTTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GAAVIHERETWNDQVLNMRSFSN*SNDFST Trigger: CGTGGAAAAGTCATTTGACAAGTTGCTGAAGGATCT...CATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
||
| CDS-3UTR CAA 90 bp | AACAAAAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTAGAGAGTCGCTTAAATaGTCAGGGTCAGTGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: NKKCVCVCVCVYSQSTAFRESLK*SGSVGF Trigger: GAACCCCACTGACCCTGACAATTTAAGCGACTCTCT...AAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAGCAACAAAGATCACGGAGTaGTTTGGAAATTATTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: VCVCVCVCLLSKHSISTATKITE*FGNYSS Trigger: GCTGGAATAATTTCCAAACAACTCCGTGATCTTTGT...TGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CAA 90 bp | CCCTTGATGGACAAAGATCACGGAGTTGTTTGGAAATTATTCCAGCCTGAAAACTCTCCGCAACTTCATTaGTATCTCCATGCTCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: PLMDKDHGVVWKLFQPENSPQLH*YLHAQS Trigger: ACTTTGAGCATGGAGATACAAATGAAGTTGCGGAGA...GTTTTCAGGCTGGAATAATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR CAA 90 bp | AAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTCCACAAGATCCTTCAGCAACTaGTCAAATGACTTTTCCACG | + |
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Preference number: 5 (lower is better) Translates to: KVCVCVCVCLLSKHSISTRSFSN*SNDFST Trigger: CGTGGAAAAGTCATTTGACAAGTTGCTGAAGGATCT...TGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CAA 90 bp | GGAGCGGCAGTCATACATGAACGTGAAACTTGGAATGATCAGGTCCTAAACATGATGCACTTTCTCCAGTaGACTCTAAAACCATTACAA | + |
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Preference number: 5 (lower is better) Translates to: GAAVIHERETWNDQVLNMMHFLQ*TLKPLQ Trigger: TTGTAATGGTTTTAGAGTCAACTGGAGAAAGTGCAT...CATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CAA 90 bp | AACAAAAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTTCTCCGCAACTTCATTaGTATCTCCATGCTCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: NKKCVCVCVCVYSQSTAFSPQLH*YLHAQS Trigger: ACTTTGAGCATGGAGATACAAATGAAGTTGCGGAGA...AAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CAA 90 bp | GGAAATTATTCCAGCCTGAAAACATTCCTCCACAAATCTCTCAAGAACAGAGTAAGATCCTTCAGCAACTaGTCAAATGACTTTTCCACG | + |
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Preference number: 5 (lower is better) Translates to: GNYSSLKTFLHKSLKNRVRSFSN*SNDFST Trigger: CGTGGAAAAGTCATTTGACAAGTTGCTGAAGGATCT...TACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS-3UTR CAA 90 bp | AACAAAAAGTGTGTGTGTGTGTGTGTGTGTGTTTACTCTCAAAGCACAGCATTTACAAAGATCACGGAGTaGTTTGGAAATTATTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: NKKCVCVCVCVYSQSTAFTKITE*FGNYSS Trigger: GCTGGAATAATTTCCAAACAACTCCGTGATCTTTGT...AAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 |
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| CDS-3UTR CAA 90 bp | GGAAATTATTCCAGCCTGAAAACATTCCTCCACAAATCTCTCAAGAACAGAGTAATGCACTTTCTCCAGTaGACTCTAAAACCATTACAA | + |
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Preference number: 5 (lower is better) Translates to: GNYSSLKTFLHKSLKNRVMHFLQ*TLKPLQ Trigger: TTGTAATGGTTTTAGAGTCAACTGGAGAAAGTGCAT...TACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237060.2 |
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| CDS GCA 90 bp | AGGTTTAAGTCTCTTAACATCTCCGCAACTTCATTTGTATCTCCATaGTCAAAGTATTCCTGTATAATTGGTGTTAGAGTCTTCTCAAAT | + |
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Preference number: 5 (lower is better) Translates to: RFKSLNISATSFVSP*SKYSCIIGVRVFSN Trigger: ATTTGAGAAGACTCTAACACCAATTATACAGGAATACTTTGAGCATGGAGATACAAATGAAGTTGCGGAGATGTTAAGAGACTTAAACCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 ENSMUST00000237060.2 |
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| CDS CAA 90 bp | TGCCCGCCTCCAGATCCCCACACACTGTCTTTCCGCTTCCCGCCTTaGGACATACTCAGGAGCACAGTAGCCTTATCCAGAGCAGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: CPPPDPHTLSFRFPP*DILRSTVALSRAAR Trigger: TCGAGCTGCTCTGGATAAGGCTACTGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGAAAGACAGTGTGTGGGGATCTGGAGGCGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 |
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| CDS GCA 72 bp | TCTCCAACAGCTCTAGCAATAAACTGGCCCACCAACTaGGGTGCCCTAGGAGTGTCCAAGGCTAGCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SPTALAINWPTN*GALGVSKASSG Trigger: CCCTGAGCTAGCCTTGGACACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGCTGTTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 ENSMUST00000237060.2 |
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| CDS CAA 90 bp | GGACTGGTGGGCACAGCAACTCCACTTCTAACCGCTTCACTTCCATaGTCACTGACTGAGTCTCCTCGGCCAGAGTCCCGGGATGAATTT | + |
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Preference number: 6 (lower is better) Translates to: GLVGTATPLLTASLP*SLTESPRPESRDEF Trigger: AAATTCATCCCGGGACTCTGGCCGAGGAGACTCAGTCAGTGACAATGGAAGTGAAGCGGTTAGAAGTGGAGTTGCTGTGCCCACCAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 ENSMUST00000237060.2 |
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| CDS CAA 72 bp | CCAGATCCCCACACACTGTCTTTCCGCTTCCCGCCTTaGGACATACTCAGGAGCACAGTAGCCTTATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: PDPHTLSFRFPP*DILRSTVALSR Trigger: TCTGGATAAGGCTACTGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGAAAGACAGTGTGTGGGGATCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 |
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| CDS CAA 90 bp | TTTAAGCAGCATATCAATCTCTTTAACAAGGTGATTGACAGGCTGTaGCCCGCCTCCAGATCCCCACACACTGTCTTTCCGCTTCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: FKQHINLFNKVIDRL*PASRSPHTVFPLPA Trigger: GGCGGGAAGCGGAAAGACAGTGTGTGGGGATCTGGAGGCGGGCAACAGCCTGTCAATCACCTTGTTAAAGAGATTGATATGCTGCTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 |
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| CDS CCA 72 bp | CATAAGATTCCATCTCCAACAGCTCTAGCAATAAACTaGCCCACCAACTGCGGTGCCCTAGGAGTGTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: HKIPSPTALAIN*PTNCGALGVSK Trigger: CTTGGACACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGCTGTTGGAGATGGAATCTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 ENSMUST00000237060.2 |
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| CDS CAA 72 bp | CATATCAATCTCTTTAACAAGGTGATTGACAGGCTGTaGCCCGCCTCCAGATCCCCACACACTGTCTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: HINLFNKVIDRL*PASRSPHTVFP Trigger: CGGAAAGACAGTGTGTGGGGATCTGGAGGCGGGCAACAGCCTGTCAATCACCTTGTTAAAGAGATTGATATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 |
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| CDS GCA 72 bp | TCAGCAACTTGTCAAATGACTTTTCCACGTCATTTGTaGTCATCACCGTCCCGCAAAGGTCAGAAAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SATCQMTFPRHL*SSPSRKGQKAA Trigger: AGCTGCTTTCTGACCTTTGCGGGACGGTGATGAGCACAAATGACGTGGAAAAGTCATTTGACAAGTTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025931.14 ENSMUST00000074371.13 ENSMUST00000165617.3 ENSMUST00000237060.2 |
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