Pregenerated sensors for PDCD2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002635Ensembl transcript IDs: ENSMUST00000002710.10, ENSMUST00000148381.3
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACATAGGCGGAGGGCCCTTTaGGGCAGCCCTTCACCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AKSEAGGVPQVQVQLGIHRRRAL*GSPSPP Trigger: CGGCGGTGAAGGGCTGCCCCAAAGGGCCCTCCGCCT...ATGTATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR GCA 90 bp | GCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACATGGCCTCCACAGCCACTaGAGGCTGGGACCTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AKSEAGGVPQVQVQLGIHGLHSH*RLGPQR Trigger: TCTCTGAGGTCCCAGCCTGCAGTGGCTGTGGAGGCC...ATGTATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR TCA 90 bp | GCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACATGTCACTTCCCAAATCTaGGGCGGGTGGTGGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: AKSEAGGVPQVQVQLGIHVTSQI*GGWWRR Trigger: ACGCCTCCACCACCCGCCTCAGATTTGGGAAGTGAC...ATGTATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR TCA 90 bp | TATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATAGCCAGGGCAGTGTCCTaGAGGCGAAGAGCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YAKSEAGGVPQVQVQLGIARAVS*RRRAWS Trigger: GCTCCAAGCTCTTCGCCTTCAGGACACTGCCCTGGC...TATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR GCA 90 bp | ATTTTATATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGCGCAGCGGCCACACTaGGGCCCCGGAGTGGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: ILYAKSEAGGVPQVQVQLAQRPH*GPGVVT Trigger: CGTTACCACTCCGGGGCCGCAGTGTGGCCGCTGCGC...TAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATATAAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR GCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTGCGCAGCGGCCACACTaGGGCCCCGGAGTGGTAACG | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASAAQRPH*GPGVVT Trigger: CGTTACCACTCCGGGGCCGCAGTGTGGCCGCTGCGC...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR CCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTAGGCGGAGGGCCCTTTaGGGCAGCCCTTCACCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASARRRAL*GSPSPP Trigger: CGGCGGTGAAGGGCTGCCCCAAAGGGCCCTCCGCCT...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR CCA 90 bp | TATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATAGGCACTTGCAGGCACTaGGAACGGAACACCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YAKSEAGGVPQVQVQLGIGTCRH*ERNTFQ Trigger: CTGGAAGGTGTTCCGTTCCCAGTGCCTGCAAGTGCC...TATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CCA 90 bp | GGGATACATATAGTGAGACCCCCGACTCAAGGGAAGGGAGATGCTAAAATAAGGACTGTGGCACTGCAGTaGGGACTGTCAGCCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GIHIVRPPTQGKGDAKIRTVALQ*GLSALP Trigger: GGGAAGGGCTGACAGTCCCCACTGCAGTGCCACAGT...CCTTATTTTAGCATCTCCCTTCCCTTGAGTCGGGGGTCTCACTATATGTATCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CCA 90 bp | GCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACATATAGGGCTGGAACTGTaGCACTGCAGTGGGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKSEAGGVPQVQVQLGIHIGLEL*HCSGDC Trigger: ACAGTCCCCACTGCAGTGCCACAGTTCCAGCCCTAT...ATGTATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR TCA 90 bp | TATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATATCCATGGGCATCTGCTaGTTTGGAGGCCAGCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: YAKSEAGGVPQVQVQLGISMGIC*FGGQQL Trigger: GAGTTGCTGGCCTCCAAATCAGCAGATGCCCATGGA...TATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR GCA 90 bp | GCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACATTCTTTCTCTGGCACTTaGAGGCACTGGGAACGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AKSEAGGVPQVQVQLGIHSFSGT*RHWERN Trigger: GTTCCGTTCCCAGTGCCTGCAAGTGCCAGAGAAAGA...ATGTATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR TCA 90 bp | GCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACATAGTGCTGGCATAAGCTaGAACTCAAACGTCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AKSEAGGVPQVQVQLGIHSAGIS*NSNVLW Trigger: CCAGAGGACGTTTGAGTTTCAGCTTATGCCAGCACT...ATGTATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR TCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTGCCAGGGCAGTGTCCTaGAGGCGAAGAGCTTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASAARAVS*RRRAWS Trigger: GCTCCAAGCTCTTCGCCTTCAGGACACTGCCCTGGC...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR TCA 90 bp | ATTTTATATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTATGTCAGCCCTTCCCCTaGAGGAGAAGGGCAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILYAKSEAGGVPQVQVQLCQPFP*RRRAGN Trigger: GTTACCTGCCCTTCTCCTTCAGGGGAAGGGCTGACA...TAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATATAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CCA 90 bp | GCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACATCAGAGACTTCAAATGTaGGGCAGGACAGAAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKSEAGGVPQVQVQLGIHQRLQM*GRTERE Trigger: CTCTCTTTCTGTCCTGCCCCACATTTGAAGTCTCTG...ATGTATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR TCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTGTCACTTCCCAAATCTaGGGCGGGTGGTGGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASAVTSQI*GGWWRR Trigger: ACGCCTCCACCACCCGCCTCAGATTTGGGAAGTGAC...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR CCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTACTGTGGCACTGCAGTaGGGACTGTCAGCCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASATVALQ*GLSALP Trigger: GGGAAGGGCTGACAGTCCCCACTGCAGTGCCACAGT...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR CCA 90 bp | GGGATACATATAGTGAGACCCCCGACTCAAGGGAAGGGAGATGCTAAAATAAGGGGGCATCTGCTGATTTaGAGGCCAGCAACTCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GIHIVRPPTQGKGDAKIRGHLLI*RPATLF Trigger: AAACAGAGTTGCTGGCCTCCAAATCAGCAGATGCCC...CCTTATTTTAGCATCTCCCTTCCCTTGAGTCGGGGGTCTCACTATATGTATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR TCA 90 bp | ATTTTATATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAAGAAGGCTGTGCGCATaGTCAAGATCCACAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILYAKSEAGGVPQVQVQLRRLCA*SRSTTL Trigger: CAGCGTTGTGGATCTTGATCATGCGCACAGCCTTCT...TAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTGGCACTTGCAGGCACTaGGAACGGAACACCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASAGTCRH*ERNTFQ Trigger: CTGGAAGGTGTTCCGTTCCCAGTGCCTGCAAGTGCC...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR CCA 90 bp | ATTTTATATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTACCAAGTCTCTTTCTCTaGCACTTGCAGGCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILYAKSEAGGVPQVQVQLPSLFL*HLQALG Trigger: TCCCAGTGCCTGCAAGTGCCAGAGAAAGAGACTTGG...TAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATATAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CCA 90 bp | GCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACATGAACCTATAAAACGTTaGATCCCCACTGCTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKSEAGGVPQVQVQLGIHEPIKR*IPTANC Trigger: ACAGTTAGCAGTGGGGATCCAACGTTTTATAGGTTC...ATGTATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTATAGGGCTGGAACTGTaGCACTGCAGTGGGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASAIGLEL*HCSGDC Trigger: ACAGTCCCCACTGCAGTGCCACAGTTCCAGCCCTAT...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR CCA 90 bp | GGGATACATATAGTGAGACCCCCGACTCAAGGGAAGGGAGATGCTAAAATAAGGCTCAAAATCTGCTCCTaGCAAGCAGCAATTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GIHIVRPPTQGKGDAKIRLKICS*QAAILF Trigger: GAAGAGAATTGCTGCTTGCCAGGAGCAGATTTTGAG...CCTTATTTTAGCATCTCCCTTCCCTTGAGTCGGGGGTCTCACTATATGTATCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR TCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTAGAAGGCTGTGCGCATaGTCAAGATCCACAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASARRLCA*SRSTTL Trigger: CAGCGTTGTGGATCTTGATCATGCGCACAGCCTTCT...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR GCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTTCTTTCTCTGGCACTTaGAGGCACTGGGAACGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASASFSGT*RHWERN Trigger: GTTCCGTTCCCAGTGCCTGCAAGTGCCAGAGAAAGA...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR TCA 90 bp | TATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACAGCAATTCTCTTCATaGACCTATAAAACGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: YAKSEAGGVPQVQVQLGIQQFSS*TYKTLD Trigger: ATCCAACGTTTTATAGGTTCATGAAGAGAATTGCTG...TATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CCA 90 bp | ATTTTATATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTACACAGAATTCTTCCATaGGCATCTGCTGATTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILYAKSEAGGVPQVQVQLHRILP*ASADLE Trigger: CTCCAAATCAGCAGATGCCCATGGAAGAATTCTGTG...TAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATATAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTCTCAAAATCTGCTCCTaGCAAGCAGCAATTCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASALKICS*QAAILF Trigger: GAAGAGAATTGCTGCTTGCCAGGAGCAGATTTTGAG...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR CCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTGAACCTATAAAACGTTaGATCCCCACTGCTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASAEPIKR*IPTANC Trigger: ACAGTTAGCAGTGGGGATCCAACGTTTTATAGGTTC...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR TCA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTCAGCAATTCTCTTCATaGACCTATAAAACGTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KIHLGLLVEHRILPWASAQQFSS*TYKTLD Trigger: ATCCAACGTTTTATAGGTTCATGAAGAGAATTGCTG...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS GCA 90 bp | GCCGTCCAGCGGGCAGTACACCTGCACGACGAGCGTGAGCGGCTGTaGGCAGCGGCCACACTGCGGCCCCGGAGTGGTAACGGCCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVQRAVHLHDERERL*AAATLRPRSGNGRQ Trigger: CTGCCGGCCGTTACCACTCCGGGGCCGCAGTGTGGCCGCTGCGCACAGCCGCTCACGCTCGTCGTGCAGGTGTACTGCCCGCTGGACGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS GCA 90 bp | TACACCTGCACGACGAGCGTGAGCGGCTGTGCGCAGCGGCCACACTaGGGCCCCGGAGTGGTAACGGCCGGCAGGGCGTCCGGAACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YTCTTSVSGCAQRPH*GPGVVTAGRASGTP Trigger: TGGCGTTCCGGACGCCCTGCCGGCCGTTACCACTCCGGGGCCGCAGTGTGGCCGCTGCGCACAGCCGCTCACGCTCGTCGTGCAGGTGTA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS GCA 90 bp | TACAGAAGCCGATGGAACGGGGAGCCGTCCAGCGGGCAGTACACCTaGACGACGAGCGTGAGCGGCTGTGCGCAGCGGCCACACTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: YRSRWNGEPSSGQYT*TTSVSGCAQRPHCG Trigger: GCCGCAGTGTGGCCGCTGCGCACAGCCGCTCACGCTCGTCGTGCAGGTGTACTGCCCGCTGGACGGCTCCCCGTTCCATCGGCTTCTGTA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CCA 90 bp | TTGCCGCAGCCTGGACGAGCACAGGCGAACACGTACAGAAGCCGATaGAACGGGGAGCCGTCCAGCGGGCAGTACACCTGCACGACGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPQPGRAQANTYRSR*NGEPSSGQYTCTTS Trigger: GCTCGTCGTGCAGGTGTACTGCCCGCTGGACGGCTCCCCGTTCCATCGGCTTCTGTACGTGTTCGCCTGTGCTCGTCCAGGCTGCGGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS TCA 90 bp | GGGCTGGAACTGTGGCACTGCAGTGGGGACTGTCAGCCCTTCCCCTaGAGGAGAAGGGCAGGTAACAGCCAGGGCAGTGTCCTGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GLELWHCSGDCQPFP*RRRAGNSQGSVLKA Trigger: CGCCTTCAGGACACTGCCCTGGCTGTTACCTGCCCTTCTCCTTCAGGGGAAGGGCTGACAGTCCCCACTGCAGTGCCACAGTTCCAGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS GCA 90 bp | GCAGGCACTGGGAACGGAACACCTTCCAGCTGCGCGTCTGGCTGTTaGCGCAGCCTGGACGAGCACAGGCGAACACGTACAGAAGCCGAT | + |
|
Preference number: 5 (lower is better) Translates to: AGTGNGTPSSCASGC*RSLDEHRRTRTEAD Trigger: ATCGGCTTCTGTACGTGTTCGCCTGTGCTCGTCCAGGCTGCGGCAACAGCCAGACGCGCAGCTGGAAGGTGTTCCGTTCCCAGTGCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CCA 90 bp | GGCACTTGCAGGCACTGGGAACGGAACACCTTCCAGCTGCGCGTCTaGCTGTTGCCGCAGCCTGGACGAGCACAGGCGAACACGTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GTCRHWERNTFQLRV*LLPQPGRAQANTYR Trigger: TCTGTACGTGTTCGCCTGTGCTCGTCCAGGCTGCGGCAACAGCCAGACGCGCAGCTGGAAGGTGTTCCGTTCCCAGTGCCTGCAAGTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS GCA 90 bp | CTTTCTCTGGCACTTGCAGGCACTGGGAACGGAACACCTTCCAGCTaGGCGTCTGGCTGTTGCCGCAGCCTGGACGAGCACAGGCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: LSLALAGTGNGTPSS*ASGCCRSLDEHRRT Trigger: TGTTCGCCTGTGCTCGTCCAGGCTGCGGCAACAGCCAGACGCGCAGCTGGAAGGTGTTCCGTTCCCAGTGCCTGCAAGTGCCAGAGAAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS-3UTR CAA 90 bp | GGGATACATATAGTGAGACCCCCGACTCAAGGGAAGGGAGATGCTAAAATAAGGCAGGCGGAGGGCCCTTaGGGGCAGCCCTTCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GIHIVRPPTQGKGDAKIRQAEGP*GQPFTA Trigger: GGCGGTGAAGGGCTGCCCCAAAGGGCCCTCCGCCTG...CCTTATTTTAGCATCTCCCTTCCCTTGAGTCGGGGGTCTCACTATATGTATCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS TCA 90 bp | GGCGGGTGGTGGAGGCGTCTCCTCAGTGTCACTTCCCCAGTCTTGTaGGCCTTCACACCAATTCTCAGCTGCAAGGCTATCGCTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: GGWWRRLLSVTSPVL*AFTPILSCKAIALI Trigger: AATCAGAGCGATAGCCTTGCAGCTGAGAATTGGTGTGAAGGCTCACAAGACTGGGGAAGTGACACTGAGGAGACGCCTCCACCACCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CCA 90 bp | TGCAAGGCTATCGCTCTGATTCTGCGCGTTCCAAGTCTCTTTCTCTaGCACTTGCAGGCACTGGGAACGGAACACCTTCCAGCTGCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: CKAIALILRVPSLFL*HLQALGTEHLPAAR Trigger: ACGCGCAGCTGGAAGGTGTTCCGTTCCCAGTGCCTGCAAGTGCCAGAGAAAGAGACTTGGAACGCGCAGAATCAGAGCGATAGCCTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CCA 90 bp | AAGCTGAAACTCAAACGTCCTCTGGCCTCCACAGCCACTGCAGGCTaGGACCTCAGAGACTTCAAATGTGGGGCAGGACAGAAAGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLKLKRPLASTATAG*DLRDFKCGAGQKER Trigger: CCTCTCTTTCTGTCCTGCCCCACATTTGAAGTCTCTGAGGTCCCAGCCTGCAGTGGCTGTGGAGGCCAGAGGACGTTTGAGTTTCAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CAA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTCAGGCGGAGGGCCCTTaGGGGCAGCCCTTCACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KIHLGLLVEHRILPWASAQAEGP*GQPFTA Trigger: GGCGGTGAAGGGCTGCCCCAAAGGGCCCTCCGCCTG...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS-3UTR CAA 90 bp | GCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATACATCTCTTTCTCTGGCACTaGCAGGCACTGGGAACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKSEAGGVPQVQVQLGIHLFLWH*QALGTE Trigger: TTCCGTTCCCAGTGCCTGCAAGTGCCAGAGAAAGAG...ATGTATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS TCA 90 bp | TCTTGTGAGCCTTCACACCAATTCTCAGCTGCAAGGCTATCGCTCTaGTTCTGCGCGTTCCAAGTCTCTTTCTCTGGCACTTGCAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SCEPSHQFSAARLSL*FCAFQVSFSGTCRH Trigger: GTGCCTGCAAGTGCCAGAGAAAGAGACTTGGAACGCGCAGAATCAGAGCGATAGCCTTGCAGCTGAGAATTGGTGTGAAGGCTCACAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS-3UTR CAA 90 bp | TATGCTAAGTCTGAGGCAGGAGGAGTGCCACAAGTTCAAGTCCAGCTAGGGATATGGGCATCTGCTGATTaGGAGGCCAGCAACTCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: YAKSEAGGVPQVQVQLGIWASAD*EASNSV Trigger: AACAGAGTTGCTGGCCTCCAAATCAGCAGATGCCCA...TATCCCTAGCTGGACTTGAACTTGTGGCACTCCTCCTGCCTCAGACTTAGCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS-3UTR CAA 90 bp | AAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTCTCTTTCTCTGGCACTaGCAGGCACTGGGAACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KIHLGLLVEHRILPWASALFLWH*QALGTE Trigger: TTCCGTTCCCAGTGCCTGCAAGTGCCAGAGAAAGAG...AGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148381.3 |
||
| CDS CCA 90 bp | ATAAAAATTCATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATaGGCATCTGCTGATTTGGAGGCCAGCAACTCTGTTTACATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IKIHLGLLVEHRILP*ASADLEASNSVYMC Trigger: ACACATGTAAACAGAGTTGCTGGCCTCCAAATCAGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATGAATTTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS TCA 72 bp | AGCCGTCCAGCGGGCAGTACACCTGCACGACGAGCGTaGGCGGCTGTGCGCAGCGGCCACACTGCGGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SRPAGSTPARRA*AAVRSGHTAAP Trigger: CGGGGCCGCAGTGTGGCCGCTGCGCACAGCCGCTCACGCTCGTCGTGCAGGTGTACTGCCCGCTGGACGGCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CAA 90 bp | CCCGGAGTGGTAACGGCCGGCAGGGCGTCCGGAACGCCACCCAGCTaGCTAGAGGTCCAGGCGGAGGGCCCTTTGGGGCAGCCCTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: PGVVTAGRASGTPPS*LEVQAEGPLGQPFT Trigger: GGTGAAGGGCTGCCCCAAAGGGCCCTCCGCCTGGACCTCTAGCAAGCTGGGTGGCGTTCCGGACGCCCTGCCGGCCGTTACCACTCCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS GCA 72 bp | CGGGCAGTACACCTGCACGACGAGCGTGAGCGGCTGTaGGCAGCGGCCACACTGCGGCCCCGGAGTGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: RAVHLHDERERL*AAATLRPRSGN Trigger: GTTACCACTCCGGGGCCGCAGTGTGGCCGCTGCGCACAGCCGCTCACGCTCGTCGTGCAGGTGTACTGCCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS GCA 72 bp | CGATGGAACGGGGAGCCGTCCAGCGGGCAGTACACCTaGACGACGAGCGTGAGCGGCTGTGCGCAGCGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RWNGEPSSGQYT*TTSVSGCAQRP Trigger: TGGCCGCTGCGCACAGCCGCTCACGCTCGTCGTGCAGGTGTACTGCCCGCTGGACGGCTCCCCGTTCCATCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CAA 72 bp | CCACCCAGCTTGCTAGAGGTCCAGGCGGAGGGCCCTTaGGGGCAGCCCTTCACCGCCGTGTCTCGAAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPSLLEVQAEGP*GQPFTAVSRSP Trigger: GGGACTTCGAGACACGGCGGTGAAGGGCTGCCCCAAAGGGCCCTCCGCCTGGACCTCTAGCAAGCTGGGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS CAA 90 bp | TCCGGAACGCCACCCAGCTTGCTAGAGGTCCAGGCGGAGGGCCCTTaGGGGCAGCCCTTCACCGCCGTGTCTCGAAGTCCCAGCAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: SGTPPSLLEVQAEGP*GQPFTAVSRSPSST Trigger: TGTACTGCTGGGACTTCGAGACACGGCGGTGAAGGGCTGCCCCAAAGGGCCCTCCGCCTGGACCTCTAGCAAGCTGGGTGGCGTTCCGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS CCA 72 bp | CCTGGACGAGCACAGGCGAACACGTACAGAAGCCGATaGAACGGGGAGCCGTCCAGCGGGCAGTACACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGRAQANTYRSR*NGEPSSGQYTC Trigger: GCAGGTGTACTGCCCGCTGGACGGCTCCCCGTTCCATCGGCTTCTGTACGTGTTCGCCTGTGCTCGTCCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CCA 72 bp | AGGCACTGGGAACGGAACACCTTCCAGCTGCGCGTCTaGCTGTTGCCGCAGCCTGGACGAGCACAGGCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RHWERNTFQLRV*LLPQPGRAQAN Trigger: GTTCGCCTGTGCTCGTCCAGGCTGCGGCAACAGCCAGACGCGCAGCTGGAAGGTGTTCCGTTCCCAGTGCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS GCA 72 bp | GGGAACGGAACACCTTCCAGCTGCGCGTCTGGCTGTTaGCGCAGCCTGGACGAGCACAGGCGAACACGTACA | + |
|
Preference number: 6 (lower is better) Translates to: GNGTPSSCASGC*RSLDEHRRTRT Trigger: TGTACGTGTTCGCCTGTGCTCGTCCAGGCTGCGGCAACAGCCAGACGCGCAGCTGGAAGGTGTTCCGTTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CAA 72 bp | TGGGAACGGAACACCTTCCAGCTGCGCGTCTGGCTGTaGCCGCAGCCTGGACGAGCACAGGCGAACACGTAC | + |
|
Preference number: 6 (lower is better) Translates to: WERNTFQLRVWL*PQPGRAQANTY Trigger: GTACGTGTTCGCCTGTGCTCGTCCAGGCTGCGGCAACAGCCAGACGCGCAGCTGGAAGGTGTTCCGTTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CAA 90 bp | TGCAGGCACTGGGAACGGAACACCTTCCAGCTGCGCGTCTGGCTGTaGCCGCAGCCTGGACGAGCACAGGCGAACACGTACAGAAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: CRHWERNTFQLRVWL*PQPGRAQANTYRSR Trigger: TCGGCTTCTGTACGTGTTCGCCTGTGCTCGTCCAGGCTGCGGCAACAGCCAGACGCGCAGCTGGAAGGTGTTCCGTTCCCAGTGCCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS TCA 72 bp | CTGTGGCACTGCAGTGGGGACTGTCAGCCCTTCCCCTaGAGGAGAAGGGCAGGTAACAGCCAGGGCAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LWHCSGDCQPFP*RRRAGNSQGSV Trigger: GACACTGCCCTGGCTGTTACCTGCCCTTCTCCTTCAGGGGAAGGGCTGACAGTCCCCACTGCAGTGCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CCA 72 bp | GCGTTCCAAGTCTCTTTCTCTGGCACTTGCAGGCACTaGGAACGGAACACCTTCCAGCTGCGCGTCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AFQVSFSGTCRH*ERNTFQLRVWL Trigger: CAGCCAGACGCGCAGCTGGAAGGTGTTCCGTTCCCAGTGCCTGCAAGTGCCAGAGAAAGAGACTTGGAACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CAA 90 bp | GCTATCGCTCTGATTCTGCGCGTTCCAAGTCTCTTTCTCTGGCACTaGCAGGCACTGGGAACGGAACACCTTCCAGCTGCGCGTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: AIALILRVPSLFLWH*QALGTEHLPAARLA Trigger: AGCCAGACGCGCAGCTGGAAGGTGTTCCGTTCCCAGTGCCTGCAAGTGCCAGAGAAAGAGACTTGGAACGCGCAGAATCAGAGCGATAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS GCA 72 bp | GCTGAAACTCAAACGTCCTCTGGCCTCCACAGCCACTaGAGGCTGGGACCTCAGAGACTTCAAATGTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AETQTSSGLHSH*RLGPQRLQMWG Trigger: GCCCCACATTTGAAGTCTCTGAGGTCCCAGCCTGCAGTGGCTGTGGAGGCCAGAGGACGTTTGAGTTTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS CCA 72 bp | CACAGATATAATAGGGCTGGAACTGTGGCACTGCAGTaGGGACTGTCAGCCCTTCCCCTGAAGGAGAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: HRYNRAGTVALQ*GLSALPLKEKG Trigger: GCCCTTCTCCTTCAGGGGAAGGGCTGACAGTCCCCACTGCAGTGCCACAGTTCCAGCCCTATTATATCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS TCA 72 bp | TGGAGGCGTCTCCTCAGTGTCACTTCCCCAGTCTTGTaGGCCTTCACACCAATTCTCAGCTGCAAGGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: WRRLLSVTSPVL*AFTPILSCKAI Trigger: GATAGCCTTGCAGCTGAGAATTGGTGTGAAGGCTCACAAGACTGGGGAAGTGACACTGAGGAGACGCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CCA 72 bp | ATCGCTCTGATTCTGCGCGTTCCAAGTCTCTTTCTCTaGCACTTGCAGGCACTGGGAACGGAACACCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IALILRVPSLFL*HLQALGTEHLP Trigger: TGGAAGGTGTTCCGTTCCCAGTGCCTGCAAGTGCCAGAGAAAGAGACTTGGAACGCGCAGAATCAGAGCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS TCA 72 bp | CCTTCACACCAATTCTCAGCTGCAAGGCTATCGCTCTaGTTCTGCGCGTTCCAAGTCTCTTTCTCTGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PSHQFSAARLSL*FCAFQVSFSGT Trigger: AGTGCCAGAGAAAGAGACTTGGAACGCGCAGAATCAGAGCGATAGCCTTGCAGCTGAGAATTGGTGTGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||
| CDS CCA 72 bp | CATCTGGGTCTTCTTGTAGAACACAGAATTCTTCCATaGGCATCTGCTGATTTGGAGGCCAGCAACTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HLGLLVEHRILP*ASADLEASNSV Trigger: AACAGAGTTGCTGGCCTCCAAATCAGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACCCAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS CAA 90 bp | GGTCTTCTTGTAGAACACAGAATTCTTCCATGGGCATCTGCTGATTaGGAGGCCAGCAACTCTGTTTACATGTGTAAACGAGAATCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GLLVEHRILPWASAD*EASNSVYMCKRESF Trigger: GAACGATTCTCGTTTACACATGTAAACAGAGTTGCTGGCCTCCAAATCAGCAGATGCCCATGGAAGAATTCTGTGTTCTACAAGAAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002710.10 |
||
| CDS CCA 72 bp | GCAAGCAGCAATTCTCTTCATGAACCTATAAAACGTTaGATCCCCACTGCTAACTGTGGTCTTCTCGTACTT | + |
|
Preference number: 6 (lower is better) Translates to: ASSNSLHEPIKR*IPTANCGLLVL Trigger: AAGTACGAGAAGACCACAGTTAGCAGTGGGGATCCAACGTTTTATAGGTTCATGAAGAGAATTGCTGCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002710.10 ENSMUST00000148381.3 |
||