Pregenerated sensors for PDCD1LG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016498Ensembl transcript IDs: ENSMUST00000112576.4, ENSMUST00000235164.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACAGAGGGAAGATTGTCAGTCTTACAAGCTCCTCTTCGGAGCCCTaGGTCACCGTCCAAAGGGTTCAAAAGTGCAAATGGCAGGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: DRGKIVSLTSSSSEP*VTVQRVQKCKWQVL Trigger: CAGGACCTGCCATTTGCACTTTTGAACCCTTTGGACGGTGACCCAGGGCTCCGAAGAGGAGCTTGTAAGACTGACAATCTTCCCTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR TCA 90 bp | AATGGCAGGTCCTGCAAGATTCTCACTTTGAGTCCAGAAGTCTCTTaGGGGTTTCCCATCAGATCCTTCCAACTCCCAAGACCGCAGGTC | + |
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Preference number: 1 (lower is better) Translates to: NGRSCKILTLSPEVS*GFPIRSFQLPRPQV Trigger: GACCTGCGGTCTTGGGAGTTGGAAGGATCTGATGGGAAACCCTCAAGAGACTTCTGGACTCAAAGTGAGAATCTTGCAGGACCTGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR CCA 90 bp | GGGTCTTGCTGTTCAGAGAGTCTTGAGACAGAGGGAAGATTGTCAGTCTTACAATCCTCTTCGGAGCCCTaGGTCACCGTCCAAAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: GSCCSESLETEGRLSVLQSSSEP*VTVQRV Trigger: AACCCTTTGGACGGTGACCCAGGGCTCCGAAGAGGA...TTGTAAGACTGACAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGCAAGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGGTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTTCAGAGGCGGAAAGCAGGAGGTaGGGGTGGGGCGGAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: VGVLNVLLKCFQLIRTSEAESRR*GWGGEQ Trigger: TTGCTCTCCGCCCCACCCCCACCTCCTGCTTTCCGC...CTCTGAAGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGGCGGAGAGCAATTCCTTTTGTTCTCACCCTGAAAGTCATTAGGAGCCTTAGTCCAGAAGTCTCTTaGGGGTTTCCCATCAGATCC | + |
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Preference number: 2 (lower is better) Translates to: VGRRAIPFVLTLKVIRSLSPEVS*GFPIRS Trigger: GGATCTGATGGGAAACCCTCAAGAGACTTCTGGACT...AAGGCTCCTAATGACTTTCAGGGTGAGAACAAAAGGAATTGCTCTCCGCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTTACAAGCTCCTCTTCGGAGCCCTGGGTCACCGTCCAAAGGGTTCAAAAGTGCAAGATTCTCACTTTaGGTCCAGAAGTCTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: VLQAPLRSPGSPSKGFKSARFSL*VQKSLE Trigger: CTCAAGAGACTTCTGGACTCAAAGTGAGAATCTTGC...ACTTTTGAACCCTTTGGACGGTGACCCAGGGCTCCGAAGAGGAGCTTGTAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR CAA 90 bp | GGGGTAAGTCTAAAGTGCCATTGGGGTCTTGCTGTTCAGAGAGTCTaGAGACAGAGGGAAGATTGTCAGTCTTACAAGCTCCTCTTCGGA | + |
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Preference number: 2 (lower is better) Translates to: GVSLKCHWGLAVQRV*RQREDCQSYKLLFG Trigger: TCCGAAGAGGAGCTTGTAAGACTGACAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGCAAGACCCCAATGGCACTTTAGACTTACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCCAGTTAATTAGAACTTCAGAGGCTGCCAGGATTCTAGGATGCTGTAAATCCTCTTCGGAGCCCTaGGTCACCGTCCAAAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: CFQLIRTSEAARILGCCKSSSEP*VTVQRV Trigger: AACCCTTTGGACGGTGACCCAGGGCTCCGAAGAGGA...TTTACAGCATCCTAGAATCCTGGCAGCCTCTGAAGTTCTAATTAACTGGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCCAGTTAATTAGAACTTCAGAGGCTGCCAGGATTCTAGGATGCTGTAAAATTTCCATGTCTCCCTaGGGAAAGCAGGAGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CFQLIRTSEAARILGCCKISMSP*GKQEVG Trigger: CCCCACCTCCTGCTTTCCGCAGGGAGACATGGAAAT...TTTACAGCATCCTAGAATCCTGGCAGCCTCTGAAGTTCTAATTAACTGGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAGTTATGACTTTGTTTATGAAAAACCCTGTCTGAAGCTTCCAAGTCCCCGGCAAAGGGTTCAAAAGTaGAAATGGCAGGTCCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: ISYDFVYEKPCLKLPSPRQRVQK*KWQVLQ Trigger: TTGCAGGACCTGCCATTTGCACTTTTGAACCCTTTG...CCGGGGACTTGGAAGCTTCAGACAGGGTTTTTCATAAACAAAGTCATAACTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTCCAGTTAATTAGAACTTCAGAGGCTGCCAGGATTCTAGGATGCTGTAAAAGTCTAAAGTGCCATTaGGGTCTTGCTGTTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CFQLIRTSEAARILGCCKSLKCH*GLAVQR Trigger: TCTCTGAACAGCAAGACCCCAATGGCACTTTAGACT...TTTACAGCATCCTAGAATCCTGGCAGCCTCTGAAGTTCTAATTAACTGGAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR TCA 90 bp | ATTAGAACTTCAGAGGCTGCCAGGATTCTAGGATGCTGTAAAACACATCAGTTAGCAAGATTCTCACTTTaGGTCCAGAAGTCTCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: IRTSEAARILGCCKTHQLARFSL*VQKSLE Trigger: CTCAAGAGACTTCTGGACTCAAAGTGAGAATCTTGC...TAACTGATGTGTTTTACAGCATCCTAGAATCCTGGCAGCCTCTGAAGTTCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR CAA 90 bp | AACAGAAAAGTAGAAACAAATACCACAGTGGGGGTACTTAACGTGTaGCTTAAATGCTTCCAGTTAATTAGAACTTCAGAGGCTGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: NRKVETNTTVGVLNV*LKCFQLIRTSEAAR Trigger: CCTGGCAGCCTCTGAAGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCACTGTGGTATTTGTTTCTACTTTTCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR CCA 72 bp | GGGTCCAGGATCCCAGGGGTAAGTCTAAAGTGCCATTaGGGTCTTGCTGTTCAGAGAGTCTTGAGACAGAGG | + |
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Preference number: 3 (lower is better) Translates to: GSRIPGVSLKCH*GLAVQRVLRQR Trigger: CCTCTGTCTCAAGACTCTCTGAACAGCAAGACCCCAATGGCACTTTAGACTTACCCCTGGGATCCTGGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR GCA 72 bp | TCGGAGCCCTGGGTCACCGTCCAAAGGGTTCAAAAGTaGAAATGGCAGGTCCTGCAAGATTCTCACTTTGAG | + |
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Preference number: 3 (lower is better) Translates to: SEPWVTVQRVQK*KWQVLQDSHFE Trigger: CTCAAAGTGAGAATCTTGCAGGACCTGCCATTTGCACTTTTGAACCCTTTGGACGGTGACCCAGGGCTCCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR GCA 72 bp | GATCCCAGGGGTAAGTCTAAAGTGCCATTGGGGTCTTaGTGTTCAGAGAGTCTTGAGACAGAGGGAAGATTG | + |
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Preference number: 3 (lower is better) Translates to: DPRGKSKVPLGS*CSESLETEGRL Trigger: CAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGCAAGACCCCAATGGCACTTTAGACTTACCCCTGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR TCA 72 bp | TCCTGCAAGATTCTCACTTTGAGTCCAGAAGTCTCTTaGGGGTTTCCCATCAGATCCTTCCAACTCCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SCKILTLSPEVS*GFPIRSFQLPR Trigger: TCTTGGGAGTTGGAAGGATCTGATGGGAAACCCTCAAGAGACTTCTGGACTCAAAGTGAGAATCTTGCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR TCA 72 bp | AAAGTGCAAATGGCAGGTCCTGCAAGATTCTCACTTTaGGTCCAGAAGTCTCTTGAGGGTTTCCCATCAGAT | + |
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Preference number: 3 (lower is better) Translates to: KVQMAGPARFSL*VQKSLEGFPSD Trigger: ATCTGATGGGAAACCCTCAAGAGACTTCTGGACTCAAAGTGAGAATCTTGCAGGACCTGCCATTTGCACTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR GCA 72 bp | AATACCACAGTGGGGGTACTTAACGTGTTGCTTAAATaGTTCCAGTTAATTAGAACTTCAGAGGCTGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: NTTVGVLNVLLK*FQLIRTSEAAR Trigger: CCTGGCAGCCTCTGAAGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCACTGTGGTATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGGGTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTTCAGAGGCTGTTCAGAGAGTCTaGAGACAGAGGGAAGATTGT | + |
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Preference number: 3 (lower is better) Translates to: VGVLNVLLKCFQLIRTSEAVQRV*RQREDC Trigger: ACAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGC...CTCTGAAGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR TCA 72 bp | ACATCAGTTATGACTTTGTTTATGAAAAACCCTGTCTaGAGCTTCCAAGTCCCCGGAGGAAATGAGGGCTAT | + |
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Preference number: 3 (lower is better) Translates to: TSVMTLFMKNPV*SFQVPGGNEGY Trigger: ATAGCCCTCATTTCCTCCGGGGACTTGGAAGCTTCAGACAGGGTTTTTCATAAACAAAGTCATAACTGATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | GTTTCCCATCAGATCCTTCCAACTCCCAAGACCGCAGGTCCAGATCTTCTTCCGGGCCTTCGGGGGTCCTaGTGTGGCTGGTGTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VSHQILPTPKTAGPDLLPGLRGS*CGWCWQ Trigger: CTGCCAACACCAGCCACATCAGGACCCCCGAAGGCC...CGGAAGAAGATCTGGACCTGCGGTCTTGGGAGTTGGAAGGATCTGATGGGAAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | TGGCAGGTCCTGCAAGATTCTCACTTTGAGTCCAGAAGTCTCTTGAGGGTTTCCGGCCTTCGGGGGTCCTaGTGTGGCTGGTGTTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: WQVLQDSHFESRSLLRVSGLRGS*CGWCWQ Trigger: CTGCCAACACCAGCCACATCAGGACCCCCGAAGGCC...GGAAACCCTCAAGAGACTTCTGGACTCAAAGTGAGAATCTTGCAGGACCTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | CTTGAGGGTTTCCCATCAGATCCTTCCAACTCCCAAGACCGCAGGTCCAGATCTTGGTGCAGGCCGGGATaGAAACATGAAGTGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: LEGFPSDPSNSQDRRSRSWCRPG*KHEVAT Trigger: CGTGGCCACTTCATGTTTTCATCCCGGCCTGCACCA...AGATCTGGACCTGCGGTCTTGGGAGTTGGAAGGATCTGATGGGAAACCCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR GCA 90 bp | GGGGTAAGTCTAAAGTGCCATTGGGGTCTTGCTGTTCAGAGAGTCTTGAGACAGTTTCCCAGGGGCAGCTaGTCCTCCAGCAGGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GVSLKCHWGLAVQRVLRQFPRGS*SSSRVA Trigger: AGCCACCCTGCTGGAGGAGCAGCTGCCCCTGGGAAA...CTGTCTCAAGACTCTCTGAACAGCAAGACCCCAATGGCACTTTAGACTTACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | AAGTGCAAATGGCAGGTCCTGCAAGATTCTCACTTTGAGTCCAGAAGTCTCTTGGGCGCAGAACACTGGTaGCCTGGTAGAGGCCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: KCKWQVLQDSHFESRSLLGAEHW*PGRGLR Trigger: CCGAAGGCCTCTACCAGGTCACCAGTGTTCTGCGCC...CAAGAGACTTCTGGACTCAAAGTGAGAATCTTGCAGGACCTGCCATTTGCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | ATTGTCAGTCTTACAAGCTCCTCTTCGGAGCCCTGGGTCACCGTCCAAAGGGTTAAGTTTCTGCTAGGCTaGGGCTTGAGGCGCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: IVSLTSSSSEPWVTVQRVKFLLG*GLRRRT Trigger: TGTTCTGCGCCTCAAGCCTCAGCCTAGCAGAAACTT...AACCCTTTGGACGGTGACCCAGGGCTCCGAAGAGGAGCTTGTAAGACTGACAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR GCA 90 bp | TGCTGTTCAGAGAGTCTTGAGACAGAGGGAAGATTGTCAGTCTTACAAGCTCCTTTTCCCAGGGGCAGCTaGTCCTCCAGCAGGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CCSESLETEGRLSVLQAPFPRGS*SSSRVA Trigger: AGCCACCCTGCTGGAGGAGCAGCTGCCCCTGGGAAA...AGGAGCTTGTAAGACTGACAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | TTGAGGGTTTCCCATCAGATCCTTCCAACTCCCAAGACCGCAGGTCCAGATCTTAAGTTTCTGCTAGGCTaGGGCTTGAGGCGCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: LRVSHQILPTPKTAGPDLKFLLG*GLRRRT Trigger: TGTTCTGCGCCTCAAGCCTCAGCCTAGCAGAAACTT...AAGATCTGGACCTGCGGTCTTGGGAGTTGGAAGGATCTGATGGGAAACCCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | GTTCAGAGAGTCTTGAGACAGAGGGAAGATTGTCAGTCTTACAAGCTCCTCTTCTGGTGCAGGCCGGGATaGAAACATGAAGTGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: VQRVLRQREDCQSYKLLFWCRPG*KHEVAT Trigger: CGTGGCCACTTCATGTTTTCATCCCGGCCTGCACCA...GAAGAGGAGCTTGTAAGACTGACAATCTTCCCTCTGTCTCAAGACTCTCTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR CAA 72 bp | TCTTGCTGTTCAGAGAGTCTTGAGACAGAGGGAAGATaGTCAGTCTTACAAGCTCCTCTTCGGAGCCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: SCCSESLETEGR*SVLQAPLRSPG Trigger: CCCAGGGCTCCGAAGAGGAGCTTGTAAGACTGACAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGCAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | ATTGTCAGTCTTACAAGCTCCTCTTCGGAGCCCTGGGTCACCGTCCAAAGGGTTAAAGCTGCTACAGGATaGAGTTGTAAGCTCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: IVSLTSSSSEPWVTVQRVKAATG*SCKLRF Trigger: GAACCTGAGCTTACAACTTCATCCTGTAGCAGCTTT...AACCCTTTGGACGGTGACCCAGGGCTCCGAAGAGGAGCTTGTAAGACTGACAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | CTTGAGGGTTTCCCATCAGATCCTTCCAACTCCCAAGACCGCAGGTCCAGATCTAAAGCTGCTACAGGATaGAGTTGTAAGCTCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LEGFPSDPSNSQDRRSRSKAATG*SCKLRF Trigger: GAACCTGAGCTTACAACTTCATCCTGTAGCAGCTTT...AGATCTGGACCTGCGGTCTTGGGAGTTGGAAGGATCTGATGGGAAACCCTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | TTTCCCATCAGATCCTTCCAACTCCCAAGACCGCAGGTCCAGATCTTCTTCCGTTGTTGGCAGGAACACTaGCATTTTGCCAGGACACTT | + |
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Preference number: 4 (lower is better) Translates to: FPIRSFQLPRPQVQIFFRCWQEH*HFARTL Trigger: AAGTGTCCTGGCAAAATGTCAGTGTTCCTGCCAACA...ACGGAAGAAGATCTGGACCTGCGGTCTTGGGAGTTGGAAGGATCTGATGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | ACCACAGTGGGGGTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTGGCGCAGAACACTGGTaGCCTGGTAGAGGCCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: TTVGVLNVLLKCFQLIRTGAEHW*PGRGLR Trigger: CCGAAGGCCTCTACCAGGTCACCAGTGTTCTGCGCC...AGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCACTGTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR GCA 90 bp | TTGAGGGTTTCCCATCAGATCCTTCCAACTCCCAAGACCGCAGGTCCAGATCTTGGAACACTGACATTTTaGCAGGACACTTCTGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: LRVSHQILPTPKTAGPDLGTLTF*QDTSAR Trigger: CCTAGCAGAAGTGTCCTGGCAAAATGTCAGTGTTCC...AAGATCTGGACCTGCGGTCTTGGGAGTTGGAAGGATCTGATGGGAAACCCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | AAGTGCAAATGGCAGGTCCTGCAAGATTCTCACTTTGAGTCCAGAAGTCTCTTGGACTCAGAGGGTCAATaGTGGCTGAAGTCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KCKWQVLQDSHFESRSLLDSEGQ*WLKSAP Trigger: AGGAGCTGACTTCAGCCATCATTGACCCTCTGAGTC...CAAGAGACTTCTGGACTCAAAGTGAGAATCTTGCAGGACCTGCCATTTGCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR CAA 72 bp | GTCCTGCAAGATTCTCACTTTGAGTCCAGAAGTCTCTaGAGGGTTTCCCATCAGATCCTTCCAACTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: VLQDSHFESRSL*RVSHQILPTPK Trigger: CTTGGGAGTTGGAAGGATCTGATGGGAAACCCTCAAGAGACTTCTGGACTCAAAGTGAGAATCTTGCAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR GCA 90 bp | GGTAAGTCTAAAGTGCCATTGGGGTCTTGCTGTTCAGAGAGTCTTGAGACAGAGGGAACACTGACATTTTaGCAGGACACTTCTGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: GKSKVPLGSCCSESLETEGTLTF*QDTSAR Trigger: CCTAGCAGAAGTGTCCTGGCAAAATGTCAGTGTTCC...CTCTGTCTCAAGACTCTCTGAACAGCAAGACCCCAATGGCACTTTAGACTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CCA 90 bp | ATCAGTTATGACTTTGTTTATGAAAAACCCTGTCTGAAGCTTCCAAGTCCCCGGGCTCCTCCAGCAGGGTaGCTCTTTCACTTTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ISYDFVYEKPCLKLPSPRAPPAG*LFHFAE Trigger: CTCTGCAAAGTGAAAGAGCCACCCTGCTGGAGGAGC...CCGGGGACTTGGAAGCTTCAGACAGGGTTTTTCATAAACAAAGTCATAACTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CCA 90 bp | TGCTGTTCAGAGAGTCTTGAGACAGAGGGAAGATTGTCAGTCTTACAAGCTCCTTGGACACTAGGGATGTaGAACAAAGCCTTTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: CCSESLETEGRLSVLQAPWTLGM*NKAFPR Trigger: CCTGGGAAAGGCTTTGTTCCACATCCCTAGTGTCCA...AGGAGCTTGTAAGACTGACAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CCA 90 bp | GTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTTCAGAGGCTGCCGCTCCTCCAGCAGGGTaGCTCTTTCACTTTGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VLNVLLKCFQLIRTSEAAAPPAG*LFHFAE Trigger: CTCTGCAAAGTGAAAGAGCCACCCTGCTGGAGGAGC...GGCAGCCTCTGAAGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CCA 90 bp | ACCACAGTGGGGGTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTCACCTCCCCTGTACCTaGAACCTCCAGGATCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: TTVGVLNVLLKCFQLIRTHLPCT*NLQDPS Trigger: ACTAGGATCCTGGAGGTTCCAGGTACAGGGGAGGTG...AGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCACTGTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| 3UTR CAA 72 bp | CTAAAGTGCCATTGGGGTCTTGCTGTTCAGAGAGTCTaGAGACAGAGGGAAGATTGTCAGTCTTACAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LKCHWGLAVQRV*RQREDCQSYKL Trigger: GAGCTTGTAAGACTGACAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGCAAGACCCCAATGGCACTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | GGTAAGTCTAAAGTGCCATTGGGGTCTTGCTGTTCAGAGAGTCTTGAGACAGAGTCATGTAAGAAGCTTTaGCTTTCACCGTCAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: GKSKVPLGSCCSESLETESCKKL*LSPSGT Trigger: AGTACCTGACGGTGAAAGTCAAAGCTTCTTACATGA...CTCTGTCTCAAGACTCTCTGAACAGCAAGACCCCAATGGCACTTTAGACTTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR GCA 90 bp | GTGGGGCGGAGAGCAATTCCTTTTGTTCTCACCCTGAAAGTCATTAGGAGCCTTTCATTTTCTACCTTCTaGAAACTGGCTCTTATCCCT | + |
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Preference number: 4 (lower is better) Translates to: VGRRAIPFVLTLKVIRSLSFSTF*KLALIP Trigger: AGGGATAAGAGCCAGTTTGCAGAAGGTAGAAAATGA...AAGGCTCCTAATGACTTTCAGGGTGAGAACAAAAGGAATTGCTCTCCGCCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CCA 90 bp | GGGTCTTGCTGTTCAGAGAGTCTTGAGACAGAGGGAAGATTGTCAGTCTTACAAGATGAAAACATGAAGTaGCCACGTTCTGGGGACTTT | + |
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Preference number: 4 (lower is better) Translates to: GSCCSESLETEGRLSVLQDENMK*PRSGDF Trigger: AAAGTCCCCAGAACGTGGCCACTTCATGTTTTCATC...TTGTAAGACTGACAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGCAAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | TCCAAGTCCCCGGAGGAAATGAGGGCTATAAATAACTCTATTGACAATCTATTTGACTCAGAGGGTCAATaGTGGCTGAAGTCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SKSPEEMRAINNSIDNLFDSEGQ*WLKSAP Trigger: AGGAGCTGACTTCAGCCATCATTGACCCTCTGAGTC...AAATAGATTGTCAATAGAGTTATTTATAGCCCTCATTTCCTCCGGGGACTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR GCA 90 bp | ATCAGTTATGACTTTGTTTATGAAAAACCCTGTCTGAAGCTTCCAAGTCCCCGGGTTCAGTGCATTCTCTaGGGTCAAAATCGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: ISYDFVYEKPCLKLPSPRVQCIL*GQNRTP Trigger: TGGAGTGCGATTTTGACCGCAGAGAATGCACTGAAC...CCGGGGACTTGGAAGCTTCAGACAGGGTTTTTCATAAACAAAGTCATAACTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGGTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTTCAGAGTGGACACTAGGGATGTaGAACAAAGCCTTTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VGVLNVLLKCFQLIRTSEWTLGM*NKAFPR Trigger: CCTGGGAAAGGCTTTGTTCCACATCCCTAGTGTCCA...CTCTGAAGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR GCA 90 bp | ACCACAGTGGGGGTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTGTTCAGTGCATTCTCTaGGGTCAAAATCGCACTCCA | + |
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Preference number: 4 (lower is better) Translates to: TTVGVLNVLLKCFQLIRTVQCIL*GQNRTP Trigger: TGGAGTGCGATTTTGACCGCAGAGAATGCACTGAAC...AGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCACTGTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGGTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTTCAGAGGATGAAAACATGAAGTaGCCACGTTCTGGGGACTTT | + |
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Preference number: 4 (lower is better) Translates to: VGVLNVLLKCFQLIRTSEDENMK*PRSGDF Trigger: AAAGTCCCCAGAACGTGGCCACTTCATGTTTTCATC...CTCTGAAGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR TCA 90 bp | GTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTTCAGAGGCTGCCTCATGTAAGAAGCTTTaGCTTTCACCGTCAGGTACT | + |
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Preference number: 4 (lower is better) Translates to: VLNVLLKCFQLIRTSEAASCKKL*LSPSGT Trigger: AGTACCTGACGGTGAAAGTCAAAGCTTCTTACATGA...GGCAGCCTCTGAAGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CCA 90 bp | ACCACAGTGGGGGTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTTCTGGATTATCACTATaGCCAGGAAGATCAAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: TTVGVLNVLLKCFQLIRTSGLSL*PGRSKR Trigger: TCGCTTTGATCTTCCTGGCCATAGTGATAATCCAGA...AGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCACTGTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGGTACTTAACGTGTTGCTTAAATGCTTCCAGTTAATTAGAACTTCAGAGTCTGGATTATCACTATaGCCAGGAAGATCAAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: VGVLNVLLKCFQLIRTSESGLSL*PGRSKR Trigger: TCGCTTTGATCTTCCTGGCCATAGTGATAATCCAGA...CTCTGAAGTTCTAATTAACTGGAAGCATTTAAGCAACACGTTAAGTACCCCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS CCA 90 bp | GCCCCGCAGATGACCAGGCAACGGTACTGCCCGGAATCTCTCACTTaGACACTAGGGATGTGGAACAAAGCCTTTCCCAGGGGCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: APQMTRQRYCPESLT*TLGMWNKAFPRGSC Trigger: GCAGCTGCCCCTGGGAAAGGCTTTGTTCCACATCCCTAGTGTCCAAGTGAGAGATTCCGGGCAGTACCGTTGCCTGGTCATCTGCGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS CCA 90 bp | AGGCAACGGTACTGCCCGGAATCTCTCACTTGGACACTAGGGATGTaGAACAAAGCCTTTCCCAGGGGCAGCTGCTCCTCCAGCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: RQRYCPESLTWTLGM*NKAFPRGSCSSSRV Trigger: CACCCTGCTGGAGGAGCAGCTGCCCCTGGGAAAGGCTTTGTTCCACATCCCTAGTGTCCAAGTGAGAGATTCCGGGCAGTACCGTTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS CCA 90 bp | CAGGAAGATCAAAGCGATGGTGCAGGCCGGGATGAAAACATGAAGTaGCCACGTTCTGGGGACTTTGGGTTCCATCCGACTCAGAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: QEDQSDGAGRDENMK*PRSGDFGFHPTQRV Trigger: GACCCTCTGAGTCGGATGGAACCCAAAGTCCCCAGAACGTGGCCACTTCATGTTTTCATCCCGGCCTGCACCATCGCTTTGATCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 90 bp | ATGGCCAGGAAGATCAAAGCGATGGTGCAGGCCGGGATGAAAACATaGAGTGGCCACGTTCTGGGGACTTTGGGTTCCATCCGACTCAGA | + |
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Preference number: 5 (lower is better) Translates to: MARKIKAMVQAGMKT*SGHVLGTLGSIRLR Trigger: TCTGAGTCGGATGGAACCCAAAGTCCCCAGAACGTGGCCACTTCATGTTTTCATCCCGGCCTGCACCATCGCTTTGATCTTCCTGGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS GCA 90 bp | ACTTGGACACTAGGGATGTGGAACAAAGCCTTTCCCAGGGGCAGCTaGTCCTCCAGCAGGGTGGCTCTTTCACTTTGCAGAGACGTATCA | + |
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Preference number: 5 (lower is better) Translates to: TWTLGMWNKAFPRGS*SSSRVALSLCRDVS Trigger: TGATACGTCTCTGCAAAGTGAAAGAGCCACCCTGCTGGAGGAGCAGCTGCCCCTGGGAAAGGCTTTGTTCCACATCCCTAGTGTCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 90 bp | GCCACGTTCTGGGGACTTTGGGTTCCATCCGACTCAGAGGGTCAATaGTGGCTGAAGTCAGCTCCTTCATGTGAGCATTCCAGAACATGC | + |
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Preference number: 5 (lower is better) Translates to: ATFWGLWVPSDSEGQ*WLKSAPSCEHSRTC Trigger: GCATGTTCTGGAATGCTCACATGAAGGAGCTGACTTCAGCCATCATTGACCCTCTGAGTCGGATGGAACCCAAAGTCCCCAGAACGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS GCA 90 bp | CCTTCTGCAAACTGGCTCTTATCCCTTCCAGTTCAGTGCATTCTCTaGGGTCAAAATCGCACTCCAGGCTCACACTGCTGCCGACGTCTA | + |
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Preference number: 5 (lower is better) Translates to: PSANWLLSLPVQCIL*GQNRTPGSHCCRRL Trigger: TAGACGTCGGCAGCAGTGTGAGCCTGGAGTGCGATTTTGACCGCAGAGAATGCACTGAACTGGAAGGGATAAGAGCCAGTTTGCAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 90 bp | TTATCACTATGGCCAGGAAGATCAAAGCGATGGTGCAGGCCGGGATaGAAACATGAAGTGGCCACGTTCTGGGGACTTTGGGTTCCATCC | + |
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Preference number: 5 (lower is better) Translates to: LSLWPGRSKRWCRPG*KHEVATFWGLWVPS Trigger: GGATGGAACCCAAAGTCCCCAGAACGTGGCCACTTCATGTTTTCATCCCGGCCTGCACCATCGCTTTGATCTTCCTGGCCATAGTGATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 90 bp | TCTGGGGACTTTGGGTTCCATCCGACTCAGAGGGTCAATGATGGCTaGAGTCAGCTCCTTCATGTGAGCATTCCAGAACATGCAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: SGDFGFHPTQRVNDG*SQLLHVSIPEHAAE Trigger: TTCAGCTGCATGTTCTGGAATGCTCACATGAAGGAGCTGACTTCAGCCATCATTGACCCTCTGAGTCGGATGGAACCCAAAGTCCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS GCA 90 bp | CATTTTCTACCTTCTGCAAACTGGCTCTTATCCCTTCCAGTTCAGTaGATTCTCTGCGGTCAAAATCGCACTCCAGGCTCACACTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: HFLPSANWLLSLPVQ*ILCGQNRTPGSHCC Trigger: GCAGCAGTGTGAGCCTGGAGTGCGATTTTGACCGCAGAGAATGCACTGAACTGGAAGGGATAAGAGCCAGTTTGCAGAAGGTAGAAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CAA 90 bp | TTGAGGGTTTCCCATCAGATCCTTCCAACTCCCAAGACCGCAGGTCCAGATCTTGGTGGCTCTTTCACTTaGCAGAGACGTATCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: LRVSHQILPTPKTAGPDLGGSFT*QRRIIF Trigger: GAAAATGATACGTCTCTGCAAAGTGAAAGAGCCACC...AAGATCTGGACCTGCGGTCTTGGGAGTTGGAAGGATCTGATGGGAAACCCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS-3UTR CAA 90 bp | GGGTCTTGCTGTTCAGAGAGTCTTGAGACAGAGGGAAGATTGTCAGTCTTACAAGGTGGCTCTTTCACTTaGCAGAGACGTATCATTTTC | + |
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Preference number: 5 (lower is better) Translates to: GSCCSESLETEGRLSVLQGGSFT*QRRIIF Trigger: GAAAATGATACGTCTCTGCAAAGTGAAAGAGCCACC...TTGTAAGACTGACAATCTTCCCTCTGTCTCAAGACTCTCTGAACAGCAAGACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS GCA 72 bp | TCCCAGGCGGCCCCGCAGATGACCAGGCAACGGTACTaGCCGGAATCTCTCACTTGGACACTAGGGATGTGG | + |
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Preference number: 6 (lower is better) Translates to: SQAAPQMTRQRY*PESLTWTLGMW Trigger: CCACATCCCTAGTGTCCAAGTGAGAGATTCCGGGCAGTACCGTTGCCTGGTCATCTGCGGGGCCGCCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 72 bp | CCGTCAGGTACTTGTAGTCCCAGGCGGCCCCGCAGATaGCCAGGCAACGGTACTGCCCGGAATCTCTCACTT | + |
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Preference number: 6 (lower is better) Translates to: PSGTCSPRRPRR*PGNGTARNLSL Trigger: AAGTGAGAGATTCCGGGCAGTACCGTTGCCTGGTCATCTGCGGGGCCGCCTGGGACTACAAGTACCTGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS CAA 90 bp | GGCCCCGCAGATGACCAGGCAACGGTACTGCCCGGAATCTCTCACTaGGACACTAGGGATGTGGAACAAAGCCTTTCCCAGGGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GPADDQATVLPGISH*DTRDVEQSLSQGQL Trigger: CAGCTGCCCCTGGGAAAGGCTTTGTTCCACATCCCTAGTGTCCAAGTGAGAGATTCCGGGCAGTACCGTTGCCTGGTCATCTGCGGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 72 bp | TGGCCAGGAAGATCAAAGCGATGGTGCAGGCCGGGATaGAAACATGAAGTGGCCACGTTCTGGGGACTTTGG | + |
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Preference number: 6 (lower is better) Translates to: WPGRSKRWCRPG*KHEVATFWGLW Trigger: CCAAAGTCCCCAGAACGTGGCCACTTCATGTTTTCATCCCGGCCTGCACCATCGCTTTGATCTTCCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS CCA 72 bp | CAAAGCGATGGTGCAGGCCGGGATGAAAACATGAAGTaGCCACGTTCTGGGGACTTTGGGTTCCATCCGACT | + |
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Preference number: 6 (lower is better) Translates to: QSDGAGRDENMK*PRSGDFGFHPT Trigger: AGTCGGATGGAACCCAAAGTCCCCAGAACGTGGCCACTTCATGTTTTCATCCCGGCCTGCACCATCGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 72 bp | TGGGGACTTTGGGTTCCATCCGACTCAGAGGGTCAATaGTGGCTGAAGTCAGCTCCTTCATGTGAGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: WGLWVPSDSEGQ*WLKSAPSCEHS Trigger: GGAATGCTCACATGAAGGAGCTGACTTCAGCCATCATTGACCCTCTGAGTCGGATGGAACCCAAAGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 72 bp | AAGATCAAAGCGATGGTGCAGGCCGGGATGAAAACATaGAGTGGCCACGTTCTGGGGACTTTGGGTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: KIKAMVQAGMKT*SGHVLGTLGSI Trigger: GATGGAACCCAAAGTCCCCAGAACGTGGCCACTTCATGTTTTCATCCCGGCCTGCACCATCGCTTTGATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 72 bp | TTAGGGGCTGTCACGGTGAATAAAGCTGCTACAGGATaGAGTTGTAAGCTCAGGTTCAGTATCGGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LGAVTVNKAATG*SCKLRFSIGSR Trigger: CCTGCTGCCGATACTGAACCTGAGCTTACAACTTCATCCTGTAGCAGCTTTATTCACCGTGACAGCCCCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 72 bp | TTTGGGTTCCATCCGACTCAGAGGGTCAATGATGGCTaGAGTCAGCTCCTTCATGTGAGCATTCCAGAACAT | + |
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Preference number: 6 (lower is better) Translates to: FGFHPTQRVNDG*SQLLHVSIPEH Trigger: ATGTTCTGGAATGCTCACATGAAGGAGCTGACTTCAGCCATCATTGACCCTCTGAGTCGGATGGAACCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS TCA 72 bp | AGAGGGTCAATGATGGCTGAAGTCAGCTCCTTCATGTaGGCATTCCAGAACATGCAGCTGAAGTTTCTGCTA | + |
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Preference number: 6 (lower is better) Translates to: RGSMMAEVSSFM*AFQNMQLKFLL Trigger: TAGCAGAAACTTCAGCTGCATGTTCTGGAATGCTCACATGAAGGAGCTGACTTCAGCCATCATTGACCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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| CDS GCA 72 bp | CTTTCACTTTGCAGAGACGTATCATTTTCTACCTTCTaGAAACTGGCTCTTATCCCTTCCAGTTCAGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: LSLCRDVSFSTF*KLALIPSSSVH Trigger: ATGCACTGAACTGGAAGGGATAAGAGCCAGTTTGCAGAAGGTAGAAAATGATACGTCTCTGCAAAGTGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112576.4 ENSMUST00000235164.2 |
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