RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PDCD11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000025047

Ensembl transcript IDs: ENSMUST00000072141.4

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATaGTTGGACCCCCAAGCCCACACGGTCTGCGGTCTTTCCGGCTAC +
Preference number: 1 (lower is better)
Translates to: PASKPGQTAQAGLRQ*LDPQAHTVCGLSGY
Trigger: GTAGCCGGAAAGACCGCAGACCGTGTGGGCTTGGGGGTCCAAGCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR TCA 90 bp CTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTaGGACAATGCTTGGACCCCCAAGCCCACACGGTCTGCGGTCTTT +
Preference number: 1 (lower is better)
Translates to: LSPQPPNQGRRHRLG*DNAWTPKPTRSAVF
Trigger: AAAGACCGCAGACCGTGTGGGCTTGGGGGTCCAAGCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 90 bp TGCGGTCTTTCCGGCTACCCACCTCTGGAGTGTAGACTGCGAGTTTaGCAAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGT +
Preference number: 1 (lower is better)
Translates to: CGLSGYPPLECRLRV*QRTKWGPDHEIHWR
Trigger: ACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTTGGCAAACTCGCAGTCTACACTCCAGAGGTGGGTAGCCGGAAAGACCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 90 bp ACACGGTCTGCGGTCTTTCCGGCTACCCACCTCTGGAGTGTAGACTaGGAGTTTGCCAAAGGACAAAGTGGGGACCTGACCACGAAATCC +
Preference number: 1 (lower is better)
Translates to: TRSAVFPATHLWSVD*EFAKGQSGDLTTKS
Trigger: GGATTTCGTGGTCAGGTCCCCACTTTGTCCTTTGGCAAACTCGCAGTCTACACTCCAGAGGTGGGTAGCCGGAAAGACCGCAGACCGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR TCA 90 bp GACAAGATGAGGAACTCAGCCTTAGTGAGCCAAGTCTGCCTTCTGTaGGCACCACAGCCCACAGGCATGCTGCAGAAACAACAGCAACTA +
Preference number: 1 (lower is better)
Translates to: DKMRNSALVSQVCLL*APQPTGMLQKQQQL
Trigger: TAGTTGCTGTTGTTTCTGCAGCATGCCTGTGGGCTGTGGTGCTCACAGAAGGCAGACTTGGCTCACTAAGGCTGAGTTCCTCATCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 90 bp GCCAAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTaGCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGAAA +
Preference number: 1 (lower is better)
Translates to: AKGQSGDLTTKSTGV*PSVLRVQQTLFKEK
Trigger: TTTCTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR CAA 90 bp GCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCTaGGACCCCCAAGCCCACACGGTCTGCGGTCTTTCCGGCTACCCA +
Preference number: 2 (lower is better)
Translates to: ASKPGQTAQAGLRQC*DPQAHTVCGLSGYP
Trigger: TGGGTAGCCGGAAAGACCGCAGACCGTGTGGGCTTGGGGGTCCAAGCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR CAA 90 bp GTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCTaGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCT +
Preference number: 2 (lower is better)
Translates to: VASGSHVFLDSSCVL*SQSPASKPGQTAQA
Trigger: AGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR-3UTR TCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAAAGTTCAAGGCTGGCTaGGTCTACATAGCAGGTTCC +
Preference number: 2 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRAKFKAG*VYIAGS
Trigger: GGAACCTGCTATGTAGACTCAGCCAGCCTTGAACTT...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR-3UTR CCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCATGCCAAAGGACAAAGTaGGGACCTGACCACGAAATC +
Preference number: 2 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRACQRTK*GPDHEI
Trigger: GATTTCGTGGTCAGGTCCCCACTTTGTCCTTTGGCA...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR-3UTR TCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACCAAGTCTGCCTTCTGTaGGCACCACAGCCCACAGGC +
Preference number: 2 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNQVCLL*APQPTG
Trigger: GCCTGTGGGCTGTGGTGCTCACAGAAGGCAGACTTG...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 72 bp GGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTaGCTGCTGCCTCCGCTGTCTGTCCGTCCGGCGGAG +
Preference number: 3 (lower is better)
Translates to: GQPQHPPGYGLG*LLPPLSVRPAE
Trigger: CTCCGCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 72 bp AAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATaGTTGGACCCCCAAGCCCACACGGTCTGCGGTCTT +
Preference number: 3 (lower is better)
Translates to: KPGQTAQAGLRQ*LDPQAHTVCGL
Trigger: AAGACCGCAGACCGTGTGGGCTTGGGGGTCCAAGCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 72 bp GCGGTCTTTCCGGCTACCCACCTCTGGAGTGTAGACTaGGAGTTTGCCAAAGGACAAAGTGGGGACCTGACC +
Preference number: 3 (lower is better)
Translates to: AVFPATHLWSVD*EFAKGQSGDLT
Trigger: GGTCAGGTCCCCACTTTGTCCTTTGGCAAACTCGCAGTCTACACTCCAGAGGTGGGTAGCCGGAAAGACCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 72 bp TCCGGCTACCCACCTCTGGAGTGTAGACTGCGAGTTTaGCAAAGGACAAAGTGGGGACCTGACCACGAAATC +
Preference number: 3 (lower is better)
Translates to: SGYPPLECRLRV*QRTKWGPDHEI
Trigger: GATTTCGTGGTCAGGTCCCCACTTTGTCCTTTGGCAAACTCGCAGTCTACACTCCAGAGGTGGGTAGCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR CCA 72 bp CTGGAGTGTAGACTGCGAGTTTGCCAAAGGACAAAGTaGGGACCTGACCACGAAATCCACTGGCGTTTGCCC +
Preference number: 3 (lower is better)
Translates to: LECRLRVCQRTK*GPDHEIHWRLP
Trigger: GGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTTGGCAAACTCGCAGTCTACACTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR TCA 72 bp AGGAACTCAGCCTTAGTGAGCCAAGTCTGCCTTCTGTaGGCACCACAGCCCACAGGCATGCTGCAGAAACAA +
Preference number: 3 (lower is better)
Translates to: RNSALVSQVCLL*APQPTGMLQKQ
Trigger: TTGTTTCTGCAGCATGCCTGTGGGCTGTGGTGCTCACAGAAGGCAGACTTGGCTCACTAAGGCTGAGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 72 bp CAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTaGCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTC +
Preference number: 3 (lower is better)
Translates to: QSGDLTTKSTGV*PSVLRVQQTLF
Trigger: GAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR TCA 72 bp TATGTGCCTTTAATCCCTTCTAAGTTCAAGGCTGGCTaGGTCTACATAGCAGGTTCCAGGCCAGCCAAGACC +
Preference number: 3 (lower is better)
Translates to: YVPLIPSKFKAG*VYIAGSRPAKT
Trigger: GGTCTTGGCTGGCCTGGAACCTGCTATGTAGACTCAGCCAGCCTTGAACTTAGAAGGGATTAAAGGCACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 72 bp CGAAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTaGAGCAAACTCTCTTCAAAGAGAAATGCTTGTTTT +
Preference number: 3 (lower is better)
Translates to: RNPLAFAHLSLE*SKLSSKRNACF
Trigger: AAAACAAGCATTTCTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR GCA 72 bp GTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGAAATaGTTGTTTTTGTTGTTTTGGGTTTGCTGTTGTTTT +
Preference number: 3 (lower is better)
Translates to: VLRVQQTLFKEK*LFLLFWVCCCF
Trigger: AAAACAACAGCAAACCCAAAACAACAAAAACAAGCATTTCTCTTTGAAGAGAGTTTGCTGCACTCTAAGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCCTCCACCTCCTGCCCTaGCCGGTGGTATCTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGLHLLP*PVVSAG
Trigger: GCCAGCAGATACCACCGGGCAGGGCAGGAGGTGGAG...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCTGGGGGACAGTCCACTaGGACCTGAGGGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGWGTVH*DLRGTG
Trigger: TCCAGTTCCCCTCAGGTCTCAGTGGACTGTCCCCCA...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCGCAAAACCCTGCACTTaGCCTCATCCCCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGAKPCT*PHPLGC
Trigger: ACAGCCCAGGGGATGAGGTCAAGTGCAGGGTTTTGC...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCGCAGGACCTTGGCAGTaGCCAGCTTTCCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAAAGPWQ*PAFPQG
Trigger: TCCCTGAGGGAAAGCTGGTCACTGCCAAGGTCCTGC...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCCCGAATCCCCCAGACTaGAGTCTGACAGCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAAPNPPD*SLTAAE
Trigger: CTCTGCGGCTGTCAGACTGCAGTCTGGGGGATTCGG...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTGCCCAGCCTGGTACTaGCTGATCTTCTCCACGGGG +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAACPAWY*LIFSTG
Trigger: CCCCGTGGAGAAGATCAGGCAGTACCAGGCTGGGCA...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCAAGCCTGAAGAGAGATaGAGCCGGGGCACCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGKPEER*SRGTSV
Trigger: CACAGAGGTGCCCCGGCTGCATCTCTCTTCAGGCTT...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCAGGAGAGAACACGTCTaGCCTCCCAGTGTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAARREHV*PPSVAG
Trigger: CCCAGCGACACTGGGAGGCCAGACGTGTTCTCTCCT...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCACTTGCACAAACCCTTaGAGGCCGTTGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGTCTNP*RPLGRL
Trigger: CAGCCTTCCCAACGGCCTCCAAGGGTTTGTGCAAGT...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCTGTCAGCCAGGTGCATaGAGGGCACCAGGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGCQPGA*RAPGLL
Trigger: TAAAAGGCCTGGTGCCCTCCATGCACCTGGCTGACA...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCAGGCTCTTGGGGTCCTaGCCACCTTCTACTGTGGAG +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAARLLGS*PPSTVE
Trigger: CTCCACAGTAGAAGGTGGCCAGGACCCCAAGAGCCT...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
3UTR CAA 72 bp CCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCTaGGACCCCCAAGCCCACACGGTCTGCGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PGQTAQAGLRQC*DPQAHTVCGLS
Trigger: GGAAAGACCGCAGACCGTGTGGGCTTGGGGGTCCAAGCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCCACTCAGCACTTTGTTaGCACGTTTGGGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGHSALC*HVWGSQ
Trigger: CTGTGAACCCCAAACGTGTCAACAAAGTGCTGAGTG...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACCAAGGCCTTGGCCTTaGCCGCCTGCACGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRPRPWP*PPARPS
Trigger: AGAAGGACGTGCAGGCGGTCAAGGCCAAGGCCTTGG...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGAAGTGGACGCCCAGGATaGAGGAAGATGGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRSGRPG*RKMGRR
Trigger: CCTGCGCCCCATCTTCCTGCATCCTGGGCGTCCACT...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCCTTGACCTCATCCCCTaGGCTGTACTTCTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAALDLIP*AVLLLW
Trigger: CCAGAGAAGAAGTACAGCCCAGGGGATGAGGTCAAG...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTTAGTCAGGGACTCCTaGGAGCCGTACATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAALVRDS*EPYMFS
Trigger: GGAAAACATGTACGGCTCTCAGGAGTCCCTGACTAA...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCATGATGTCAGCCAGGTaGATGGAGGGCACCAGGCCT +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCMMSAR*MEGTRP
Trigger: AGGCCTGGTGCCCTCCATGCACCTGGCTGACATCAT...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCGGACATCATCTAAGATaGGGGAGGCATGGATACAGC +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAAGHHLR*GRHGYS
Trigger: GCTGTATCCATGCCTCCCGCATCTTAGATGATGTCC...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCACTCTGGTGCGAGGATaGACGCAGAGGATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCTLVRG*TQRMQA
Trigger: AGCCTGCATCCTCTGCGTCCATCCTCGCACCAGAGT...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCATCACTCGGCCCATaGCCACTTCACCTTCTTCAA +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAASSLGP*PLHLLQ
Trigger: TTGAAGAAGGTGAAGTGGCCATGGGCCGAGTGATGA...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGATCCACGTCCCCGAGCTaGAACTCCAGCTGGGCAAAC +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRSTSPS*NSSWAN
Trigger: GTTTGCCCAGCTGGAGTTCCAGCTCGGGGACGTGGA...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCAGTCTTGGTTGCTCATaGGGCTGCGAATGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCSLGCS*GCECPA
Trigger: TGCAGGGCATTCGCAGCCTCATGAGCAACCAAGACT...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCGTCTCTGAATCCCTCTaGACTGGCATCCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCVSESL*TGILVL
Trigger: GAGGACCAGGATGCCAGTTCAGAGGGATTCAGAGAC...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACCAGGCTTGACACTGTaGCTGTCAGCAGCATGCCAG +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRPGLTL*LSAACQ
Trigger: CTGGCATGCTGCTGACAGGCACAGTGTCAAGCCTGG...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCGGCCTCAGCGTTGAATaGTTTCTTAGAATCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGGLSVE*FLRIRE
Trigger: CTCTCTGATTCTAAGAAAGCATTCAACGCTGAGGCC...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCTTAGCTTGGTGCGGCTaGTCATCCTCGCTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCLAWCG*SSSLSE
Trigger: CTCAGACAGCGAGGATGAGCAGCCGCACCAAGCTAA...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCGCACGTCCTTCTCCGTaGCGTGCTGCTTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCARPSP*RAASHS
Trigger: ACTATGAGAAGCAGCACGGCACGGAGAAGGACGTGC...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCTGCTGTACGATTCCCTaGTGTCTACTGCTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGCCTIP*CLLLFL
Trigger: GAGAAAAAGCAGTAGACACCAGGGAATCGTACAGCA...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACCCCTCTGTGACTTCTaGGGCTCTTCCTTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRPLCDF*GSSFSS
Trigger: GGAGGAGAAGGAAGAGCCCCAGAAGTCACAGAGGGG...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCCGATCACTCTCGCAGTaGCTTTCTTCCCGGCTTTCA +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCRSLSQ*LSSRLS
Trigger: TGAAAGCCGGGAAGAAAGTCACTGCGAGAGTGATCG...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCACGTTGTACTTCTTaGAGAAGCAGGTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAASRCTS*RSRSQS
Trigger: AGACTGTGACCTGCTTCTTCAAGAAGTACAACGTGA...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCGGCCAAACCCAGAACTaGAGGTCCAAGGCCTATGAT +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCGQTQN*RSKAYD
Trigger: ATCATAGGCCTTGGACCTTCAGTTCTGGGTTTGGCC...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGTCGCCCAGGGTCCATaGGTGCCTCCTCAATGCGCG +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRAVAQGP*VPPQCA
Trigger: CGCGCATTGAGGAGGCACTCATGGACCCTGGGCGAC...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCAGACATGTGAATACTTaGCCAAACCCAGAACTGAAG +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGRHVNT*PNPELK
Trigger: CTTCAGTTCTGGGTTTGGCCAAGTATTCACATGTCT...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCTGTATTTCTCGGACTTaGTGTAGATGTCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGCISRT*CRCQPD
Trigger: ATCTGGCTGACATCTACACCAAGTCCGAGAAATACA...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCGGCCGTTGGGAAGGCTaGCCACCAGCTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVGRWEG*PPAPAH
Trigger: GTGAGCTGGAGCTGGTGGTCAGCCTTCCCAACGGCC...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCAGGTGAAACATACTaGCTTTCCCTATCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: SPGTAPAPARLWVRLPAASGETY*LSLSSQ
Trigger: TTGGGAAGATAGGGAAAGTCAGTATGTTTCACCTGA...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCCCAGCTGGGCAAACTTaGCGATCACATCCACATGTT +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCPAGQT*RSHPHV
Trigger: AACATGTGGATGTGATCGTCAAGTTTGCCCAGCTGG...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCCACCAGGATCCCAAATaGCTTTATGGCCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCHQDPK*LYGQHC
Trigger: ACAGTGCTGGCCATAAAGCCATTTGGGATCCTGGTG...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGAGGCCACCTTCTACTGTaGAGACCAAAGCTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRGHLLL*RPKLVS
Trigger: GGAAACCAGCTTTGGTCTCCACAGTAGAAGGTGGCC...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCTCTGGGGTGACTTATTaGGAGAAACTTAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: PARLWVRLPAASAVCPSGSGVTY*EKLRCL
Trigger: AAGACATCTAAGTTTCTCCCAATAAGTCACCCCAGA...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGAAGACGTCTGTGCGTTTaGGGTAGGTGCTCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRRRLCV*GRCSVC
Trigger: ACACACTGAGCACCTACCCCAAACGCACAGACGTCT...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCACAGCCTGGTACTGCCTaGTCTTCTCCACGGGGCTCT +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRAQPGTA*SSPRGS
Trigger: AGAGCCCCGTGGAGAAGATCAGGCAGTACCAGGCTG...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCATCGCCCACCCCTCTGTaGCTTCTGGGGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRASPTPL*LLGLFL
Trigger: AAGGAAGAGCCCCAGAAGTCACAGAGGGGTGGGCGA...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGAGCACCTTTGTTCTTCTaGCGGATGTACTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRAPLFF*RMYSCA
Trigger: GGCACAAGAGTACATCCGGCAGAAGAACAAAGGTGC...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCCTGTTTTCTTCTGACTaGTCTCAACACCCGGATCCT +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCLFSSD*SQHPDP
Trigger: AGGATCCGGGTGTTGAGAGCAGTCAGAAGAAAACAG...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAAGGCTGCGAATGCCCTaGAGCTCTTCCAGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRARLRMP*SSSRHW
Trigger: CCAGTGCCTGGAAGAGCTGCAGGGCATTCGCAGCCT...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGCTGCTTCCCCCTGGGTaGCAGCTTCGGCTCCCCCAC +
Preference number: 4 (lower is better)
Translates to: STGVCPSVLRVQQTLFKELLPPG*QLRLPH
Trigger: GTGGGGGAGCCGAAGCTGCCACCCAGGGGGAAGCAG...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGATTCTTCTTCTTAGCTTaGTGCGGCTGCTCATCCTCG +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRFFFLA*CGCSSS
Trigger: CGAGGATGAGCAGCCGCACCAAGCTAAGAAGAAGAA...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCCCCCATCCTTCAGCCTaGAGATGGCCCCCGCATTCT +
Preference number: 4 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVPHPSA*RWPPHS
Trigger: AGAATGCGGGGGCCATCTTCAGGCTGAAGGATGGGG...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAATCCCAAAGGAAGCCTaGAGAGAGATGCAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRAIPKEA*REMQPG
Trigger: CCCCGGCTGCATCTCTCTTCAGGCTTCCTTTGGGAT...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCCTGCCCGGTGGTATCTaGTGGCTCTCAGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVLPGGI*WLSGPG
Trigger: ACCTGGTCCTGAGAGCCAGCAGATACCACCGGGCAG...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGCCCCAGACTGCAGTCTaGCAGCCGCAGAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: STGVCPSVLRVQQTLFKEPQTAV*QPQRQQ
Trigger: CTGCTGTCTCTGCGGCTGTCAGACTGCAGTCTGGGG...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCACCACCAACTGCCCGATaGGCACAGCTCCTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRAPPTAR*AQLLFS
Trigger: AGAAAACAGGAGCTGTGCGCATCGGGCAGTTGGTGG...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCATCTGTGGATTTTGTCTaGTTCCCCCTGGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRASVDFV*FPLGGS
Trigger: GCTGCCACCCAGGGGGAAGCAGACAAAATCCACAGA...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCACTGACCAGACGTCTGTaGGTTTGGGGTAGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRALTRRL*VWGRCS
Trigger: TGAGCACCTACCCCAAACGCACAGACGTCTGGTCAG...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCGCTGTACTTCTTCTCTaGGTTCTTCATCATGATGTC +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCAVLLL*VLHHDV
Trigger: GACATCATGATGAAGAACCCAGAGAAGAAGTACAGC...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGGGTCCGGGATGTGCTaGGTGCTAAGCTCATGCTTA +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRAGSGMC*VLSSCL
Trigger: TAAGCATGAGCTTAGCACCCAGCACATCCCGGACCC...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCAGCTCTTCCAGGCACTaGCACAGGAGGAGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVSSSRH*HRRRKL
Trigger: CAGCTTCCTCCTCCTGTGCCAGTGCCTGGAAGAGCT...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAACAGTCTGCCCAGCCTaGTACTGCCTGATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRATVCPA*YCLIFS
Trigger: GGAGAAGATCAGGCAGTACCAGGCTGGGCAGACTGT...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCTCTTGCCACTCTCTGTaGCATCCAGGCTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVSCHSL*HPGCSP
Trigger: TGGTGAGCAGCCTGGATGTCACAGAGAGTGGCAAGA...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCATGGTCTTCCAGGCTTaGCACTGTGCCTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVMVFQA*HCACQQ
Trigger: CTGCTGACAGGCACAGTGTCAAGCCTGGAAGACCAT...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCATCTGGCTGCCGTGCTTaGTGGTCATGTCGATGTAGA +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRASGCRA*WSCRCR
Trigger: TCTACATCGACATGACCATCAAGCACGGCAGCCAGA...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAACCAGGCCTTTTATCTaGTCACCCACCTTCACCAGG +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRATRPFI*SPTFTR
Trigger: CCTGGTGAAGGTGGGTGAGCAGATAAAAGGCCTGGT...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAACCCTTCAACTCACTTaGCCGAACACTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRATLQLT*PNTQLQ
Trigger: CTGGAGCTGAGTGTTCGGCCAAGTGAGTTGAAGGGT...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCTATGATCACACTGCTTaGCAGGACACATTTCACATA +
Preference number: 4 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCYDHTA*QDTFHI
Trigger: TATGTGAAATGTGTCCTGCCAAGCAGTGTGATCATA...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCAGCTGGAGTCCAAACTaGGTTACCTTCTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVSWSPN*VTFCTW
Trigger: CCAGGTGCAGAAGGTAACTCAGTTTGGACTCCAGCT...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCTTGGCCTTGACCGCCTaGACGTCCTTCTCCGTGCCG +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLLALTA*TSFSVP
Trigger: CGGCACGGAGAAGGACGTGCAGGCGGTCAAGGCCAA...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGATTTGCTGGCCCTTTCTaGCTCTTTTTCCTTTTAATG +
Preference number: 4 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRFAGPF*LFFLLM
Trigger: CATTAAAAGGAAAAAGAGCCAGAAAGGGCCAGCAAA...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAACGGACAGGTGTGGCGTaGGGAGGAAAGCAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKRTGVA*GGKQGC
Trigger: ACACCCCTGCTTTCCTCCCCACGCCACACCTGTCCG...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAATTGTCTGCTTCCCCCTaGGTGGCAGCTTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKLSASP*VAASAP
Trigger: GGGAGCCGAAGCTGCCACCCAGGGGGAAGCAGACAA...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGCCAGCGCCGAGCTCTTaGCCTCCACATACTCCAAGG +
Preference number: 4 (lower is better)
Translates to: NPLAFAHLSLECSKLSSKPAPSS*PPHTPR
Trigger: CCTTGGAGTATGTGGAGGCCAAGAGCTCGGCGCTGG...CTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGGCGCCAGGCTCAGGTaGATGACCCGCTCAAAGATG +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKGARLR*MTRSKM
Trigger: CATCTTTGAGCGGGTCATTCACCTGAGCCTGGCGCC...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCCCCAGGGTCCATGAGTaGCTCCTCAATGCGCGACAG +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLPRVHE*LLNARQ
Trigger: CTGTCGCGCATTGAGGAGGCACTCATGGACCCTGGG...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACCAGGATGCAGGAAGATaGGGCGCAGGCTCAGTCGCA +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNQDAGR*GAGSVA
Trigger: TGCGACTGAGCCTGCGCCCCATCTTCCTGCATCCTG...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCATCCCAAATGGCTTTATaGCCAGCACTGTGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRASQMAL*PALCPL
Trigger: TAAAGGGCACAGTGCTGGCCATAAAGCCATTTGGGA...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAACCAGTGGTGCAACAGTaGGCCATTGGCAGCGTGGTC +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKPVVQQ*AIGSVV
Trigger: GACCACGCTGCCAATGGCCCACTGTTGCACCACTGG...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGAGACCTGAGGGGAACTaGACGAACACGCCATACTCC +
Preference number: 4 (lower is better)
Translates to: STGVCPSVLRVQQTLFKERPEGN*TNTPYS
Trigger: GGAGTATGGCGTGTTCGTCCAGTTCCCCTCAGGTCT...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAACCCGGTGGTATCTGCTaGCTCTCAGGACCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKPGGIC*LSGPGQ
Trigger: CTGACCTGGTCCTGAGAGCCAGCAGATACCACCGGG...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTTCCTGCCCTGCCCGGTaGTATCTGCTGGCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSSCPAR*YLLALR
Trigger: CCTGAGAGCCAGCAGATACCACCGGGCAGGGCAGGA...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCCATCCACATGTTCCTTaGCGGGCAGGCACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLHPHVP*RAGTPG
Trigger: CCCTGGAGTGCCTGCCCGCCAAGGAACATGTGGATG...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCATGGAGCTGCAATAATTaGTTTCCGCAGAGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRAWSCNN*FPQREQ
Trigger: TTGCTCTCTCTGCGGAAATCAATTATTGCAGCTCCA...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAACACGCCATACTCCTTaGTGCACTTCACAAAACCAA +
Preference number: 4 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRATRHTP*CTSQNQ
Trigger: TTGGTTTTGTGAAGTGCATCAAGGAGTATGGCGTGT...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAACCAGGCTCAGGTGAATaGCCCGCTCAAAGATGTCCC +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKPGSGE*PAQRCP
Trigger: GGGACATCTTTGAGCGGGTCATTCACCTGAGCCTGG...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACGTCGCACAACTCTGGTaGGAGGATGGACGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNVAQLW*EDGRRG
Trigger: TCCTCTGCGTCCATCCTCGCACCAGAGTTGTGCGAC...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCTTATGGCCAGCACTGTaGCCTTTACTACTGTCCCTA +
Preference number: 4 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVLWPAL*PLLLSL
Trigger: TAGGGACAGTAGTAAAGGGCACAGTGCTGGCCATAA...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCCTCACAGCTCAGCACTaGCACCTTTACCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLLTAQH*HLYHLA
Trigger: GGCCAGGTGGTAAAGGTGGCAGTGCTGAGCTGTGAG...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCGTGGCCTCGATGGCCTaGCCAACCTGGAACTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLVASMA*PTWNFL
Trigger: CAAGAAGTTCCAGGTTGGGCAGGCCATCGAGGCCAC...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGAGGCTCGTTGTACTaGACAGCTCGCTCGAAGACC +
Preference number: 4 (lower is better)
Translates to: NPLAFAHLSLECSKLSSKRGSLY*TARSKT
Trigger: GGTCTTCGAGCGAGCTGTGCAGTACAACGAGCCTCT...CTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAATGTTATGGGGCAGGATaGCCACCTCCAGCCCGGTTT +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKCYGAG*PPPARF
Trigger: AAACCGGGCTGGAGGTGGCCATCCTGCCCCATAACA...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACCCTGTCTGGAGCCAGTaGTGCAACAGTGGGCCATTG +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNPVWSQ*CNSGPL
Trigger: CAATGGCCCACTGTTGCACCACTGGCTCCAGACAGG...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTACAGGAGGAGGAAGCTaGTGCTGGCCGAATCCCCCA +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSTGGGS*CWPNPP
Trigger: TGGGGGATTCGGCCAGCACCAGCTTCCTCCTCCTGT...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGGAGAAAGCCACAAGGTaGCCAGTCTCCACCAAGGAT +
Preference number: 4 (lower is better)
Translates to: STGVCPSVLRVQQTLFKEEKATR*PVSTKD
Trigger: ATCCTTGGTGGAGACTGGCCACCTTGTGGCTTTCTC...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp ATAGCAGGTTCCAGGCCAGCCAAGACCATAATACAAACCCTGTCTCAAAAGATTGCCGGGGCACCTCTGTaGATTTTGTCTGCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: IAGSRPAKTIIQTLSQKIAGAPL*ILSASP
Trigger: GGGGGAAGCAGACAAAATCCACAGAGGTGCCCCGGC...AATCTTTTGAGACAGGGTTTGTATTATGGTCTTGGCTGGCCTGGAACCTGCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAATCGGAGTGGCAAGGCTaGAGTCAGAGAGTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKSEWQG*SQRVKP
Trigger: GGGCTTGACTCTCTGACTCCAGCCTTGCCACTCCGA...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGGGTTCACAGAAAGCTTaGCGCTCTTCTTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: STGVCPSVLRVQQTLFKEGSQKA*RSSCHS
Trigger: AGAGTGGCAAGAAGAGCGTCAAGCTTTCTGTGAACC...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGGCTCCTGTTTTCTTCTaGCTGCTCTCAACACCCGGA +
Preference number: 4 (lower is better)
Translates to: NPLAFAHLSLECSKLSSKAPVFF*LLSTPG
Trigger: TCCGGGTGTTGAGAGCAGTCAGAAGAAAACAGGAGC...CTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp ATAGCAGGTTCCAGGCCAGCCAAGACCATAATACAAACCCTGTCTCAAAAGATTCTCATCCTCGCTGTCTaGGCTCTCTTCTCGGAGTGG +
Preference number: 4 (lower is better)
Translates to: IAGSRPAKTIIQTLSQKILILAV*ALFSEW
Trigger: CCACTCCGAGAAGAGAGCTCAGACAGCGAGGATGAG...AATCTTTTGAGACAGGGTTTGTATTATGGTCTTGGCTGGCCTGGAACCTGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTGCTCAAAGATGTCCCTaGCTGCTGTCTGGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSAQRCP*LLSGCR
Trigger: ACGGCAGCCAGACAGCAGTCAGGGACATCTTTGAGC...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp ATAGCAGGTTCCAGGCCAGCCAAGACCATAATACAAACCCTGTCTCAAAAGATTGTCTGGAGCCAGTGGTaGAACAGTGGGCCATTGGCA +
Preference number: 4 (lower is better)
Translates to: IAGSRPAKTIIQTLSQKIVWSQW*NSGPLA
Trigger: TGCCAATGGCCCACTGTTGCACCACTGGCTCCAGAC...AATCTTTTGAGACAGGGTTTGTATTATGGTCTTGGCTGGCCTGGAACCTGCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAATCAGTCGCACAACTCTaGTGCGAGGATGGACGCAGA +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKSVAQL*CEDGRR
Trigger: TCTGCGTCCATCCTCGCACCAGAGTTGTGCGACTGA...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGGGTGTCACCTGTCTaGAGCCAGTGGTGCAACAGT +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNRVSPV*SQWCNS
Trigger: ACTGTTGCACCACTGGCTCCAGACAGGTGACACCCT...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCGCTCTCTTCTCGGAGTaGCAAGGCTGGAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLALFSE*QGWSQR
Trigger: TCTCTGACTCCAGCCTTGCCACTCCGAGAAGAGAGC...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCTCCGTGGCCTGTAGGTaGAAAGCCATGTACTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLSVACR*KAMYCS
Trigger: GCTGCAGTACATGGCTTTCCACCTACAGGCCACGGA...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTTCCCTGACTGCTGTCTaGCTGCCGTGCTTGATGGTC +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSSLTAV*LPCLMV
Trigger: GACCATCAAGCACGGCAGCCAGACAGCAGTCAGGGA...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAATCTCCTGCTCCTCTCTaGATGAGATGGTCTTCAGGG +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKSPAPL*MRWSSG
Trigger: CCCTGAAGACCATCTCATTCAGAGAGGAGCAGGAGA...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTGCTGTCTGGCTGCCGTaGTTGATGGTCATGTCGATG +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSAVWLP*LMVMSM
Trigger: CATCGACATGACCATCAAGCACGGCAGCCAGACAGC...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAAAGATGTCCCTGACTaGTGTCTGGCTGCCGTGCTT +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNKDVPD*CLAAVL
Trigger: AAGCACGGCAGCCAGACAGCAGTCAGGGACATCTTT...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp ATAGCAGGTTCCAGGCCAGCCAAGACCATAATACAAACCCTGTCTCAAAAGATTGTTACCTTCTGCACCTaGGCTTTGACCAGCAGCCCT +
Preference number: 4 (lower is better)
Translates to: IAGSRPAKTIIQTLSQKIVTFCT*ALTSSP
Trigger: AGGGCTGCTGGTCAAAGCCCAGGTGCAGAAGGTAAC...AATCTTTTGAGACAGGGTTTGTATTATGGTCTTGGCTGGCCTGGAACCTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCTTTCTGAGAGGCTCTTaGGGTCCTGGCCACCTTCTA +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLFLRGS*GPGHLL
Trigger: TAGAAGGTGGCCAGGACCCCAAGAGCCTCTCAGAAA...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCATGTCAGCAAGTGTCTaGATCAATACAGAGTCTTGG +
Preference number: 4 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVMSASV*INTESW
Trigger: CCAAGACTCTGTATTGATCCAGACACTTGCTGACAT...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGCTCTTGTTTTGGTTCTaGAGCAGGAGAGAACACGTC +
Preference number: 4 (lower is better)
Translates to: STGVCPSVLRVQQTLFKELLFWF*SRREHV
Trigger: GACGTGTTCTCTCCTGCTCCAGAACCAAAACAAGAG...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGCCTCTCCTCTTGTTTTaGTTCTGGAGCAGGAGAGAA +
Preference number: 4 (lower is better)
Translates to: STGVCPSVLRVQQTLFKEPLLLF*FWSRRE
Trigger: TTCTCTCCTGCTCCAGAACCAAAACAAGAGGAGAGG...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAAAGGATGGAGCTGTTaGGAGAGCTTAGCACCAGCC +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNKGWSC*ESLAPA
Trigger: GGCTGGTGCTAAGCTCTCCCAACAGCTCCATCCTTT...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTCCTTCTCGATCTCCGTaGCCTGTAGGTGGAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSPSRSP*PVGGKP
Trigger: TGGCTTTCCACCTACAGGCCACGGAGATCGAGAAGG...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACGATGCAGGAAAACCTTaGGAGGCTCGTTGTACTGCA +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNDAGKP*EARCTA
Trigger: TGCAGTACAACGAGCCTCTCAAGGTTTTCCTGCATC...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGGACAGCAGCATCCTCTaGTTCGATTCATCCACATTG +
Preference number: 4 (lower is better)
Translates to: NPLAFAHLSLECSKLSSKDSSIL*FDSSTL
Trigger: CAATGTGGATGAATCGAAGCAGAGGATGCTGCTGTC...CTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGTTCCCTGGTGTCTACTaGTTTTTCTCAGCTTTCTCG +
Preference number: 4 (lower is better)
Translates to: STGVCPSVLRVQQTLFKEFPGVY*FFSAFS
Trigger: CGAGAAAGCTGAGAAAAAGCAGTAGACACCAGGGAA...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCACTGTCGTCTTCTTCTaGGGCTCCAGACTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLTVVFF*GSRLLW
Trigger: CCAAAGAAGTCTGGAGCCGCAGAAGAAGACGACAGT...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGCAACATTCCGGGCTaGATTTCTGAGAGGCTCTTG +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNSNIPG*ISERLL
Trigger: CAAGAGCCTCTCAGAAATCCAGCCCGGAATGTTGCT...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAACTGCAGCCAAAGGATaGAGCTGTTGGGAGAGCTTA +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKTAAKG*SCWESL
Trigger: TAAGCTCTCCCAACAGCTCCATCCTTTGGCTGCAGT...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAATTGTGCCTTCTTAAGTaGCAGAAAAGCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKLCLLK*QKSSGP
Trigger: GGGACCAGAGCTTTTCTGTCACTTAAGAAGGCACAA...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACATGATTCTACACTTGTaGGTGCTCCCCGGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNMILHL*VLPGLK
Trigger: CTTCAAACCGGGGAGCACTCACAAGTGTAGAATCAT...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACACTTCACAAAACCAATaGGCAACATTCCGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNTSQNQ*ATFRAG
Trigger: TCCAGCCCGGAATGTTGCTCATTGGTTTTGTGAAGT...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGTGGAAGGTATCATTaGGGTGAGAGATCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: NPLAFAHLSLECSKLSSKSGRYH*GERSER
Trigger: TCTCTCTGATCTCTCACCTCAATGATACCTTCCACT...CTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGCGTCCTCAATGGAGTTaGTTTCTGGATCTTCTATTC +
Preference number: 4 (lower is better)
Translates to: STGVCPSVLRVQQTLFKERPQWS*FLDLLF
Trigger: GAATAGAAGATCCAGAAATCAACTCCATTGAGGACG...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGTCACAACTCCTCCGTTaGTTTTCACCTCTTCAACCA +
Preference number: 4 (lower is better)
Translates to: NPLAFAHLSLECSKLSSKSQLLR*FSPLQP
Trigger: TGGTTGAAGAGGTGAAAAGCAACGGAGGAGTTGTGA...CTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCAAGGACTCTTCCAGATaGTGTACGATTCCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLKDSSR*CTIPWC
Trigger: ACACCAGGGAATCGTACAGCATCTGGAAGAGTCCTT...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTGGTCCTCTTAGAAGCTaGCCCTTCCACAGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSGPLRS*PFHSQN
Trigger: ATTTTGGCTGTGGAAGGGCCAGCTTCTAAGAGGACC...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTAAGATGCGGGAGGCATaGATACAGCCAACAAAGCCA +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSKMREA*IQPTKP
Trigger: TGGCTTTGTTGGCTGTATCCATGCCTCCCGCATCTT...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp ATAGCAGGTTCCAGGCCAGCCAAGACCATAATACAAACCCTGTCTCAAAAGATTCACTCAGCTCCAGGATaGTCAGAACAAATCTGGGGT +
Preference number: 4 (lower is better)
Translates to: IAGSRPAKTIIQTLSQKIHSAPG*SEQIWG
Trigger: ACCCCAGATTTGTTCTGACCATCCTGGAGCTGAGTG...AATCTTTTGAGACAGGGTTTGTATTATGGTCTTGGCTGGCCTGGAACCTGCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACTCTGGCTGTAGTCAATaGTTCTACACTTGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNSGCSQ*FYTCEC
Trigger: GCACTCACAAGTGTAGAATCATTGACTACAGCCAGA...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAAGGTATCATTGAGGTaGGAGATCAGAGAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNKVSLR*EIREKA
Trigger: GGCTTTCTCTCTGATCTCTCACCTCAATGATACCTT...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR TCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAAGTCCAGGTAGCGCTTaGAAAAGAACTTCATCCTCT +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKSPGSA*KRTSSS
Trigger: AGAGGATGAAGTTCTTTTTCAAGCGCTACCTGGACT...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTCAGAGGTTCTTCTTGTaGCACCTGCTCATTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSQRFFL*HLLIQL
Trigger: AAGCTGAATGAGCAGGTGGCACAAGAAGAACCTCTG...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGTGCGTTTGGGGTAGGTaGTCAGTGTGTTTTCAAAAA +
Preference number: 4 (lower is better)
Translates to: NPLAFAHLSLECSKLSSKCVWGR*SVCFQK
Trigger: TTTTTGAAAACACACTGAGCACCTACCCCAAACGCA...CTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGTGTGGAGACCAAAGCTaGTTTCCTGCAAAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: NPLAFAHLSLECSKLSSKCGDQS*FPAKKN
Trigger: ATTCTTCTTTGCAGGAAACCAGCTTTGGTCTCCACA...CTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTTCTCTCTGTTTGTCCTaGATGACCGGAGTGACAAAG +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSSLCLS*MTGVTK
Trigger: CTTTGTCACTCCGGTCATCCAGGACAAACAGAGAGA...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp ATAGCAGGTTCCAGGCCAGCCAAGACCATAATACAAACCCTGTCTCAAAAGATTAAGCTCTTTCTCTGGTaGGACACACTCAGAGACATG +
Preference number: 4 (lower is better)
Translates to: IAGSRPAKTIIQTLSQKIKLFLW*DTLRDM
Trigger: CATGTCTCTGAGTGTGTCCCACCAGAGAAAGAGCTT...AATCTTTTGAGACAGGGTTTGTATTATGGTCTTGGCTGGCCTGGAACCTGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAATAAAGCTCTTTCTCTaGTGGGACACACTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKIKLFL*WDTLRD
Trigger: GTCTCTGAGTGTGTCCCACCAGAGAAAGAGCTTTAT...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR GCA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAACCAATAGCCAGGCTATaGCTTTTCTTAGACTTCACA +
Preference number: 4 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKPIARL*LFLDFT
Trigger: TGTGAAGTCTAAGAAAAGGCATAGCCTGGCTATTGG...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTTGTTCAACCACCTGCTaGGAAGACTTCTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSCSTTC*EDFSDL
Trigger: CAAATCAGAGAAGTCTTCCCAGCAGGTGGTTGAACA...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACCACAAAGTGTTCACTTaGAGTGGTTACGAACTTGTC +
Preference number: 4 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNHKVFT*SGYELV
Trigger: GACAAGTTCGTAACCACTCCAAGTGAACACTTTGTG...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTTGGTCAGAACAAATCTaGGGTGACTTATTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSWSEQI*GDLLGE
Trigger: TTCTCCCAATAAGTCACCCCAGATTTGTTCTGACCA...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CCA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCTGGGACCTTCTTCTGTaGAAACATCAAATAAGTTGT +
Preference number: 4 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLWDLLL*KHQISC
Trigger: ACAACTTATTTGATGTTTCCACAGAAGAAGGTCCCA...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCTCCTGGCGCTCCCGCTaGCCTCGCCCACCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: PARLWVRLPAASAVCPSGSWRSR*PRPPLC
Trigger: ACAGAGGGGTGGGCGAGGCAAGCGGGAGCGCCAGGA...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCAAGGCCTTGGCCTaGACCGCCTGCACGTCCTTC +
Preference number: 5 (lower is better)
Translates to: SPGTAPAPARLWVRLPAASKALA*TACTSF
Trigger: GAAGGACGTGCAGGCGGTCAAGGCCAAGGCCTTGGA...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCACCTTGAGAGGCTCGTaGTACTGCACAGCTCGCTCG +
Preference number: 5 (lower is better)
Translates to: PARLWVRLPAASAVCPSGTLRGS*YCTARS
Trigger: CGAGCGAGCTGTGCAGTACAACGAGCCTCTCAAGGT...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTTCTGCACCTGGGCTTaGACCAGCAGCCCTGGTAGT +
Preference number: 5 (lower is better)
Translates to: SPGTAPAPARLWVRLPAAFCTWA*TSSPGS
Trigger: ACTACCAGGGCTGCTGGTCAAAGCCCAGGTGCAGAA...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp TGCCCTGCAGCTCTTCCAGGCACTGGCACAGGAGGAGGAAGCTGGTaGTGGCCGAATCCCCCAGACTGCAGTCTGACAGCCGCAGAGACA +
Preference number: 5 (lower is better)
Translates to: CPAALPGTGTGGGSW*WPNPPDCSLTAAET
Trigger: TGTCTCTGCGGCTGTCAGACTGCAGTCTGGGGGATTCGGCCAGCACCAGCTTCCTCCTCCTGTGCCAGTGCCTGGAAGAGCTGCAGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp CCTGCAGCTCTTCCAGGCACTGGCACAGGAGGAGGAAGCTGGTGCTaGCCGAATCCCCCAGACTGCAGTCTGACAGCCGCAGAGACAGCA +
Preference number: 5 (lower is better)
Translates to: PAALPGTGTGGGSWC*PNPPDCSLTAAETA
Trigger: TGCTGTCTCTGCGGCTGTCAGACTGCAGTCTGGGGGATTCGGCCAGCACCAGCTTCCTCCTCCTGTGCCAGTGCCTGGAAGAGCTGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp GAATGCCCTGCAGCTCTTCCAGGCACTGGCACAGGAGGAGGAAGCTaGTGCTGGCCGAATCCCCCAGACTGCAGTCTGACAGCCGCAGAG +
Preference number: 5 (lower is better)
Translates to: ECPAALPGTGTGGGS*CWPNPPDCSLTAAE
Trigger: CTCTGCGGCTGTCAGACTGCAGTCTGGGGGATTCGGCCAGCACCAGCTTCCTCCTCCTGTGCCAGTGCCTGGAAGAGCTGCAGGGCATTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCGCACTCAGCACTTTGTaGACACGTTTGGGGTTCACA +
Preference number: 5 (lower is better)
Translates to: PARLWVRLPAASAVCPSGALSTL*TRLGFT
Trigger: TGTGAACCCCAAACGTGTCAACAAAGTGCTGAGTGC...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCCTCACAACTCCTCCGTaGCTTTTCACCTCTTCAACC +
Preference number: 5 (lower is better)
Translates to: PARLWVRLPAASAVCPSGLTTPP*LFTSST
Trigger: GGTTGAAGAGGTGAAAAGCAACGGAGGAGTTGTGAG...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp CCAGCGCCGAGCTCTTGGCCTCCACATACTCCAAGGCCTTGGCCTTaGCCGCCTGCACGTCCTTCTCCGTGCCGTGCTGCTTCTCATAGT +
Preference number: 5 (lower is better)
Translates to: PAPSSWPPHTPRPWP*PPARPSPCRAASHS
Trigger: ACTATGAGAAGCAGCACGGCACGGAGAAGGACGTGCAGGCGGTCAAGGCCAAGGCCTTGGAGTATGTGGAGGCCAAGAGCTCGGCGCTGG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp AACTCGGTGAAGGGTGTCACCTGTCTGGAGCCAGTGGTGCAACAGTaGGCCATTGGCAGCGTGGTCGGACAGGTGTGGCGTGGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: NSVKGVTCLEPVVQQ*AIGSVVGQVWRGEE
Trigger: TTCCTCCCCACGCCACACCTGTCCGACCACGCTGCCAATGGCCCACTGTTGCACCACTGGCTCCAGACAGGTGACACCCTTCACCGAGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp TGGTTGCTCATGAGGCTGCGAATGCCCTGCAGCTCTTCCAGGCACTaGCACAGGAGGAGGAAGCTGGTGCTGGCCGAATCCCCCAGACTG +
Preference number: 5 (lower is better)
Translates to: WLLMRLRMPCSSSRH*HRRRKLVLAESPRL
Trigger: CAGTCTGGGGGATTCGGCCAGCACCAGCTTCCTCCTCCTGTGCCAGTGCCTGGAAGAGCTGCAGGGCATTCGCAGCCTCATGAGCAACCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCTTTTTGTCTCTCTGTTaGTCCTGGATGACCGGAGTG +
Preference number: 5 (lower is better)
Translates to: PARLWVRLPAASAVCPSGFLSLC*SWMTGV
Trigger: CACTCCGGTCATCCAGGACAAACAGAGAGACAAAAA...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AGTCCTGGGACAGCCCCAGCACCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCGACTTCTTTGGCCTCTaGTTCACTAGTTCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: SPGTAPAPARLWVRLPAADFFGL*FTSSCS
Trigger: CGAGCAGGAACTAGTGAACAAGAGGCCAAAGAAGTC...GGCAGCAGGCAGCCTAACCCATAGCCGGGCGGGTGCTGGGGCTGTCCCAGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp GGACATCATCTAGCACAGCCCCTAGCTGCTGGTAAGAGATGCGGGTaGGTGGACGCCCAGGATGCAGGAAGATGGGGCGCAGGCTCAGTC +
Preference number: 5 (lower is better)
Translates to: GHHLAQPLAAGKRCG*VDAQDAGRWGAGSV
Trigger: GACTGAGCCTGCGCCCCATCTTCCTGCATCCTGGGCGTCCACTCACCCGCATCTCTTACCAGCAGCTAGGGGCTGTGCTAGATGATGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp ACGTGTAGAACCACGACCTTCTTCTTCTGTCCAGGCTCCACCTCCTaGCCTGCCCGGTGGTATCTGCTGGCTCTCAGGACCAGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: TCRTTTFFFCPGSTS*PARWYLLALRTRSG
Trigger: GCCTGACCTGGTCCTGAGAGCCAGCAGATACCACCGGGCAGGGCAGGAGGTGGAGCCTGGACAGAAGAAGAAGGTCGTGGTTCTACACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp TGTTCACTAGTTCCTGCTCGCTCTCAGACTCCTGGCGCTCCCGCTTaGCTCGCCCACCCCTCTGTGACTTCTGGGGCTCTTCCTTCTCCT +
Preference number: 5 (lower is better)
Translates to: CSLVPARSQTPGAPA*LAHPSVTSGALPSP
Trigger: AGGAGAAGGAAGAGCCCCAGAAGTCACAGAGGGGTGGGCGAGGCAAGCGGGAGCGCCAGGAGTCTGAGAGCGAGCAGGAACTAGTGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp TCTTCTGCGGCTCCAGACTTCTTTGGCCTCTTGTTCACTAGTTCCTaGTCGCTCTCAGACTCCTGGCGCTCCCGCTTGCCTCGCCCACCC +
Preference number: 5 (lower is better)
Translates to: SSAAPDFFGLLFTSS*SLSDSWRSRLPRPP
Trigger: GGGTGGGCGAGGCAAGCGGGAGCGCCAGGAGTCTGAGAGCGAGCAGGAACTAGTGAACAAGAGGCCAAAGAAGTCTGGAGCCGCAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp TTCTTTGGCCTCTTGTTCACTAGTTCCTGCTCGCTCTCAGACTCCTaGCGCTCCCGCTTGCCTCGCCCACCCCTCTGTGACTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: FFGLLFTSSCSLSDS*RSRLPRPPLCDFWG
Trigger: GCCCCAGAAGTCACAGAGGGGTGGGCGAGGCAAGCGGGAGCGCCAGGAGTCTGAGAGCGAGCAGGAACTAGTGAACAAGAGGCCAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp TCTTCAGGGCCCTCTCAGCCACAGCCCGGGCCTTCTCGATCTCCGTaGCCTGTAGGTGGAAAGCCATGTACTGCAGCCAAAGGATGGAGC +
Preference number: 5 (lower is better)
Translates to: SSGPSQPQPGPSRSP*PVGGKPCTAAKGWS
Trigger: GCTCCATCCTTTGGCTGCAGTACATGGCTTTCCACCTACAGGCCACGGAGATCGAGAAGGCCCGGGCTGTGGCTGAGAGGGCCCTGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CCCGCCCGGCTATGGGTTAGGCTGCCTGCTGCCTCCGCTGTCTGTCCGTCCGGCACTTTGTTGACACGTTaGGGGTTCACAGAAAGCTTG +
Preference number: 5 (lower is better)
Translates to: PARLWVRLPAASAVCPSGTLLTR*GFTESL
Trigger: CAAGCTTTCTGTGAACCCCAAACGTGTCAACAAAGT...GCCGGACGGACAGACAGCGGAGGCAGCAGGCAGCCTAACCCATAGCCGGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp ACTGGCACAGGAGGAGGAAGCTGGTGCTGGCCGAATCCCCCAGACTaGAGTCTGACAGCCGCAGAGACAGCAGCATCCTCTGCTTCGATT +
Preference number: 5 (lower is better)
Translates to: TGTGGGSWCWPNPPD*SLTAAETAASSASI
Trigger: AATCGAAGCAGAGGATGCTGCTGTCTCTGCGGCTGTCAGACTGCAGTCTGGGGGATTCGGCCAGCACCAGCTTCCTCCTCCTGTGCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp GCCCAGGATGCAGGAAGATGGGGCGCAGGCTCAGTCGCACAACTCTaGTGCGAGGATGGACGCAGAGGATGCAGGCTTTTACCGTTTGAT +
Preference number: 5 (lower is better)
Translates to: AQDAGRWGAGSVAQL*CEDGRRGCRLLPFD
Trigger: ATCAAACGGTAAAAGCCTGCATCCTCTGCGTCCATCCTCGCACCAGAGTTGTGCGACTGAGCCTGCGCCCCATCTTCCTGCATCCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCTCAGCACTCAGCACTTaGTTGACACGTTTGGGGTTC +
Preference number: 5 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCSALST*LTRLGF
Trigger: GAACCCCAAACGTGTCAACAAAGTGCTGAGTGCTGA...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCTCCAGCTGGGCAAACTaGACGATCACATCCACATGT +
Preference number: 5 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCSSWAN*TITSTC
Trigger: ACATGTGGATGTGATCGTCAAGTTTGCCCAGCTGGA...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp CCCAGGGTCCATGAGTGCCTCCTCAATGCGCGACAGCTCCTTCTCTaGCTTCTGCTTCTCCAGCTCCCTCTCCTTCTTGCCCTTCTTCTT +
Preference number: 5 (lower is better)
Translates to: PRVHECLLNARQLLL*LLLLQLPLLLALLL
Trigger: AAGAAGAAGGGCAAGAAGGAGAGGGAGCTGGAGAAGCAGAAGGCAGAGAAGGAGCTGTCGCGCATTGAGGAGGCACTCATGGACCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp TTGGTTCTGGAGCAGGAGAGAACACGTCTGGCCTCCCAGTGTCGCTaGGAAGGAGCGACAGCTCTATCAGGTTCTTCATGGGGTTCACGC +
Preference number: 5 (lower is better)
Translates to: LVLEQERTRLASQCR*EGATALSGSSWGSR
Trigger: GCGTGAACCCCATGAAGAACCTGATAGAGCTGTCGCTCCTTCCCAGCGACACTGGGAGGCCAGACGTGTTCTCTCCTGCTCCAGAACCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp AAAATGGCTTTAGCGCGCTCCACGTCCCCGAGCTGGAACTCCAGCTaGGCAAACTTGACGATCACATCCACATGTTCCTTGGCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: KMALARSTSPSWNSS*ANLTITSTCSLAGR
Trigger: CCTGCCCGCCAAGGAACATGTGGATGTGATCGTCAAGTTTGCCCAGCTGGAGTTCCAGCTCGGGGACGTGGAGCGCGCTAAAGCCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCATCCAGCGCCGAGCTCTaGGCCTCCACATACTCCAAG +
Preference number: 5 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRASSAEL*ASTYSK
Trigger: CTTGGAGTATGTGGAGGCCAAGAGCTCGGCGCTGGA...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp AGACTTCGGTCACTTGCACAAACCCTTGGAGGCCGTTGGGAAGGCTaGCCACCAGCTCCAGCTCACTCACCTCCTTCACACAGCCCAAAA +
Preference number: 5 (lower is better)
Translates to: RLRSLAQTLGGRWEG*PPAPAHSPPSHSPK
Trigger: TTTTGGGCTGTGTGAAGGAGGTGAGTGAGCTGGAGCTGGTGGTCAGCCTTCCCAACGGCCTCCAAGGGTTTGTGCAAGTGACCGAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp TGCTCTCAACACCCGGATCCTTTGGCCGCGAGTCACTCAACAGTCTaGAGGACAGGAGCATCCTCTCCTTGGAAGGCTCACAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: CSQHPDPLAASHSTV*RTGASSPWKAHSSA
Trigger: TGCTGAGCTGTGAGCCTTCCAAGGAGAGGATGCTCCTGTCCTTCAGACTGTTGAGTGACTCGCGGCCAAAGGATCCGGGTGTTGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp CCTCCAGGGGTGCCTCGGAGTACGAGTCGCTCAGGTGAAACATACTaGCTTTCCCTATCTTCCCAAAAGGGAAGGAGACGGTCAGTCCCC +
Preference number: 5 (lower is better)
Translates to: PPGVPRSTSRSGETY*LSLSSQKGRRRSVP
Trigger: GGGGACTGACCGTCTCCTTCCCTTTTGGGAAGATAGGGAAAGTCAGTATGTTTCACCTGAGCGACTCGTACTCCGAGGCACCCCTGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp GTGACAAAGCCAGCACACGGTGTGCTGTGGACAGGATGTAACATCTaGCAATCTTCTGGGGGCAGAAGTCCTCCAGGGGTGCCTCGGAGT +
Preference number: 5 (lower is better)
Translates to: VTKPAHGVLWTGCNI*QSSGGRSPPGVPRS
Trigger: ACTCCGAGGCACCCCTGGAGGACTTCTGCCCCCAGAAGATTGTCAGATGTTACATCCTGTCCACAGCACACCGTGTGCTGGCTTTGTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp GCCCTTCTTCTTCTTAGCTTGGTGCGGCTGCTCATCCTCGCTGTCTaGGCTCTCTTCTCGGAGTGGCAAGGCTGGAGTCAGAGAGTCAAG +
Preference number: 5 (lower is better)
Translates to: ALLLLSLVRLLILAV*ALFSEWQGWSQRVK
Trigger: CTTGACTCTCTGACTCCAGCCTTGCCACTCCGAGAAGAGAGCTCAGACAGCGAGGATGAGCAGCCGCACCAAGCTAAGAAGAAGAAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp TCGTTGTACTGCACAGCTCGCTCGAAGACCTTAGTCAGGGACTCCTaGGAGCCGTACATGTTTTCCAGGTTCAGCAGGGCCACCCACACG +
Preference number: 5 (lower is better)
Translates to: SLYCTARSKTLVRDS*EPYMFSRFSRATHT
Trigger: CGTGTGGGTGGCCCTGCTGAACCTGGAAAACATGTACGGCTCTCAGGAGTCCCTGACTAAGGTCTTCGAGCGAGCTGTGCAGTACAACGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp GAAGAGCTCAGGCAGGCGGAGCAGGTCCTCCAGAGGTTCTTCTTGTaGCACCTGCTCATTCAGCTTCTGAGTGTAGGCGTCACAGACTTC +
Preference number: 5 (lower is better)
Translates to: EELRQAEQVLQRFFL*HLLIQLLSVGVTDF
Trigger: GAAGTCTGTGACGCCTACACTCAGAAGCTGAATGAGCAGGTGGCACAAGAAGAACCTCTGGAGGACCTGCTCCGCCTGCCTGAGCTCTTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp CAGGATGCAGGAAGATGGGGCGCAGGCTCAGTCGCACAACTCTGGTaGGAGGATGGACGCAGAGGATGCAGGCTTTTACCGTTTGATTTG +
Preference number: 5 (lower is better)
Translates to: QDAGRWGAGSVAQLW*EDGRRGCRLLPFDL
Trigger: CAAATCAAACGGTAAAAGCCTGCATCCTCTGCGTCCATCCTCGCACCAGAGTTGTGCGACTGAGCCTGCGCCCCATCTTCCTGCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp CATCCACCAACTGCCCGATGCGCACAGCTCCTGTTTTCTTCTGACTaGTCTCAACACCCGGATCCTTTGGCCGCGAGTCACTCAACAGTC +
Preference number: 5 (lower is better)
Translates to: HPPTARCAQLLFSSD*SQHPDPLAASHSTV
Trigger: GACTGTTGAGTGACTCGCGGCCAAAGGATCCGGGTGTTGAGAGCAGTCAGAAGAAAACAGGAGCTGTGCGCATCGGGCAGTTGGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp CCGGTCACTCCCGGTTCTGTGGTCTTGAGGGTAAGGCAGACACCCTaGCCCACACGCAGCTTCTCAGAGTCAAAGTGGAAGGTATCATTG +
Preference number: 5 (lower is better)
Translates to: PVTPGSVVLRVRQTP*PTRSFSESKWKVSL
Trigger: CAATGATACCTTCCACTTTGACTCTGAGAAGCTGCGTGTGGGGCAGGGTGTCTGCCTTACCCTCAAGACCACAGAACCGGGAGTGACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp AAAGCCCTGGGGACGTCTGGGTCAACAACGGTGGCCTCGATGGCCTaGCCAACCTGGAACTTCTTGTCTGGGTGTTTCAGAACCTTGAAG +
Preference number: 5 (lower is better)
Translates to: KALGTSGSTTVASMA*PTWNFLSGCFRTLK
Trigger: CTTCAAGGTTCTGAAACACCCAGACAAGAAGTTCCAGGTTGGGCAGGCCATCGAGGCCACCGTTGTTGACCCAGACGTCCCCAGGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp GTGACAGACATAAGAAAGCCCTGGGGACGTCTGGGTCAACAACGGTaGCCTCGATGGCCTGCCCAACCTGGAACTTCTTGTCTGGGTGTT +
Preference number: 5 (lower is better)
Translates to: VTDIRKPWGRLGQQR*PRWPAQPGTSCLGV
Trigger: AACACCCAGACAAGAAGTTCCAGGTTGGGCAGGCCATCGAGGCCACCGTTGTTGACCCAGACGTCCCCAGGGCTTTCTTATGTCTGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp TCTCCGTGGCCTGTAGGTGGAAAGCCATGTACTGCAGCCAAAGGATaGAGCTGTTGGGAGAGCTTAGCACCAGCCGGTCAAAGTCATCCG +
Preference number: 5 (lower is better)
Translates to: SPWPVGGKPCTAAKG*SCWESLAPAGQSHP
Trigger: CGGATGACTTTGACCGGCTGGTGCTAAGCTCTCCCAACAGCTCCATCCTTTGGCTGCAGTACATGGCTTTCCACCTACAGGCCACGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGACAATGCCCACAAAGTGTTCACTaGGAGTGGTTACGAACTTGT +
Preference number: 5 (lower is better)
Translates to: QSPASKPGQTAQAGLRQCPQSVH*EWLRTC
Trigger: ACAAGTTCGTAACCACTCCAAGTGAACACTTTGTGG...GCATTGTCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp ATAAGAAAGCCCTGGGGACGTCTGGGTCAACAACGGTGGCCTCGATaGCCTGCCCAACCTGGAACTTCTTGTCTGGGTGTTTCAGAACCT +
Preference number: 5 (lower is better)
Translates to: IRKPWGRLGQQRWPR*PAQPGTSCLGVSEP
Trigger: AGGTTCTGAAACACCCAGACAAGAAGTTCCAGGTTGGGCAGGCCATCGAGGCCACCGTTGTTGACCCAGACGTCCCCAGGGCTTTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCAGGAGCATCCTCTCCTaGGAAGGCTCACAGCTCAGC +
Preference number: 5 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVRSILS*EGSQLS
Trigger: GCTGAGCTGTGAGCCTTCCAAGGAGAGGATGCTCCT...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp GACTGCTGTCTGGCTGCCGTGCTTGATGGTCATGTCGATGTAGACTaGCCAGACGTCTGTGCGTTTGGGGTAGGTGCTCAGTGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: DCCLAAVLDGHVDVD*PDVCAFGVGAQCVF
Trigger: GAAAACACACTGAGCACCTACCCCAAACGCACAGACGTCTGGTCAGTCTACATCGACATGACCATCAAGCACGGCAGCCAGACAGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp TCTACACTTGTGAGTGCTCCCCGGTTTGAAGGCCTCAGCGTTGAATaGTTTCTTAGAATCAGAGAGATGGCTGACCCGGGCGTAGGCCAG +
Preference number: 5 (lower is better)
Translates to: STLVSAPRFEGLSVE*FLRIREMADPGVGQ
Trigger: CTGGCCTACGCCCGGGTCAGCCATCTCTCTGATTCTAAGAAAGCATTCAACGCTGAGGCCTTCAAACCGGGGAGCACTCACAAGTGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp AGAGATCAGAGAGAAAGCCACAAGGTGGCCAGTCTCCACCAAGGATaGCACGGCAAAGGACTCTTCCAGATGCTGTACGATTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RDQRESHKVASLHQG*HGKGLFQMLYDSLV
Trigger: CACCAGGGAATCGTACAGCATCTGGAAGAGTCCTTTGCCGTGGCATCCTTGGTGGAGACTGGCCACCTTGTGGCTTTCTCTCTGATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp TCCATGAGTGCCTCCTCAATGCGCGACAGCTCCTTCTCTGCCTTCTaGTTCTCCAGCTCCCTCTCCTTCTTGCCCTTCTTCTTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: SMSASSMRDSSFSAF*FSSSLSFLPFFFLA
Trigger: AGCTAAGAAGAAGAAGGGCAAGAAGGAGAGGGAGCTGGAGAAGCAGAAGGCAGAGAAGGAGCTGTCGCGCATTGAGGAGGCACTCATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp CAAAACCCTGCACTTGACCTCATCCCCTGGGCTGTACTTCTTCTCTaGGTTCTTCATCATGATGTCAGCCAGGTGCATGGAGGGCACCAG +
Preference number: 5 (lower is better)
Translates to: QNPALDLIPWAVLLL*VLHHDVSQVHGGHQ
Trigger: CTGGTGCCCTCCATGCACCTGGCTGACATCATGATGAAGAACCCAGAGAAGAAGTACAGCCCAGGGGATGAGGTCAAGTGCAGGGTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp TTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGACGGCACAGGCTGGGCTGAGAAAGTCAACCAGGCCCTaGAAGAACGTAAGGAAATTT +
Preference number: 5 (lower is better)
Translates to: LSQSPASKPGQTAQAGLRKSTRP*KNVRKF
Trigger: AAATTTCCTTACGTTCTTCAAGGGCCTGGTTGACTT...TCTCAGCCCAGCCTGTGCCGTCTGCCCTGGTTTGGAGGCTGGGGACTGAGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp CAAAGAAGAATGTGTCTCTCACTCTGGCTCAAACACAGAACTCGGTaGAGGGTGTCACCTGTCTGGAGCCAGTGGTGCAACAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: QRRMCLSLWLKHRTR*RVSPVWSQWCNSGP
Trigger: TGGCCCACTGTTGCACCACTGGCTCCAGACAGGTGACACCCTTCACCGAGTTCTGTGTTTGAGCCAGAGTGAGAGACACATTCTTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp GGTATCTGCTGGCTCTCAGGACCAGGTCAGGCACAGGATCACTACTaGACACCACTGAACCATCTTCTAACACCTCATGGACCACGGCAT +
Preference number: 5 (lower is better)
Translates to: GICWLSGPGQAQDHY*TPLNHLLTPHGPRH
Trigger: ATGCCGTGGTCCATGAGGTGTTAGAAGATGGTTCAGTGGTGTTCAGTAGTGATCCTGTGCCTGACCTGGTCCTGAGAGCCAGCAGATACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp CTTTCCCTATCTTCCCAAAAGGGAAGGAGACGGTCAGTCCCCTGTTaGGTACAACCTTCATCACTCGGCCCATGGCCACTTCACCTTCTT +
Preference number: 5 (lower is better)
Translates to: LSLSSQKGRRRSVPC*VQPSSLGPWPLHLL
Trigger: AAGAAGGTGAAGTGGCCATGGGCCGAGTGATGAAGGTTGTACCCAACAGGGGACTGACCGTCTCCTTCCCTTTTGGGAAGATAGGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGTTCACGCGCAGGACCTaGGCAGTGACCAGCTTTCCC +
Preference number: 5 (lower is better)
Translates to: NPLAFAHLSLECSKLSSKFTRRT*AVTSFP
Trigger: GGGAAAGCTGGTCACTGCCAAGGTCCTGCGCGTGAA...CTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCATCCTCTCCTCTTGTTTaGGTTCTGGAGCAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRASSPLV*VLEQER
Trigger: TCTCTCCTGCTCCAGAACCAAAACAAGAGGAGAGGA...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp GATGCACTTCACAAAACCAATGAGCAACATTCCGGGCTGGATTTCTaGGAGGCTCTTGGGGTCCTGGCCACCTTCTACTGTGGAGACCAA +
Preference number: 5 (lower is better)
Translates to: DALHKTNEQHSGLDF*EALGVLATFYCGDQ
Trigger: TTGGTCTCCACAGTAGAAGGTGGCCAGGACCCCAAGAGCCTCTCAGAAATCCAGCCCGGAATGTTGCTCATTGGTTTTGTGAAGTGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp CCCACACGCAGCTTCTCAGAGTCAAAGTGGAAGGTATCATTGAGGTaGGAGATCAGAGAGAAAGCCACAAGGTGGCCAGTCTCCACCAAG +
Preference number: 5 (lower is better)
Translates to: PTRSFSESKWKVSLR*EIREKATRWPVSTK
Trigger: CTTGGTGGAGACTGGCCACCTTGTGGCTTTCTCTCTGATCTCTCACCTCAATGATACCTTCCACTTTGACTCTGAGAAGCTGCGTGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp AGGAAACCTCGGAGTGCTCTACAGAGAGACTCACAACTCCTCCGTTaGTTTTCACCTCTTCAACCACACAGGTCAGGTACTGGCCGACTT +
Preference number: 5 (lower is better)
Translates to: RKPRSALQRDSQLLR*FSPLQPHRSGTGRL
Trigger: AAGTCGGCCAGTACCTGACCTGTGTGGTTGAAGAGGTGAAAAGCAACGGAGGAGTTGTGAGTCTCTCTGTAGAGCACTCCGAGGTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp TTCCAGCTTTGCTCCTCAGTTGCGAAGGCAGAGGAAACCTCGGAGTaGTCTACAGAGAGACTCACAACTCCTCCGTTGCTTTTCACCTCT +
Preference number: 5 (lower is better)
Translates to: FQLCSSVAKAEETSE*STERLTTPPLLFTS
Trigger: AGAGGTGAAAAGCAACGGAGGAGTTGTGAGTCTCTCTGTAGAGCACTCCGAGGTTTCCTCTGCCTTCGCAACTGAGGAGCAAAGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp TGGCCAGTCTCCACCAAGGATGCCACGGCAAAGGACTCTTCCAGATaGTGTACGATTCCCTGGTGTCTACTGCTTTTTCTCAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: WPVSTKDATAKDSSR*CTIPWCLLLFLSFL
Trigger: GAGAAAGCTGAGAAAAAGCAGTAGACACCAGGGAATCGTACAGCATCTGGAAGAGTCCTTTGCCGTGGCATCCTTGGTGGAGACTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp GCTGGATTTCTGAGAGGCTCTTGGGGTCCTGGCCACCTTCTACTGTaGAGACCAAAGCTGGTTTCCTGCAAAGAAGAATGTGTCTCTCAC +
Preference number: 5 (lower is better)
Translates to: AGFLRGSWGPGHLLL*RPKLVSCKEECVSH
Trigger: GTGAGAGACACATTCTTCTTTGCAGGAAACCAGCTTTGGTCTCCACAGTAGAAGGTGGCCAGGACCCCAAGAGCCTCTCAGAAATCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp GTAGGCGAGGTGCCCACTGGGACATCATCTAAGATGCGGGAGGCATaGATACAGCCAACAAAGCCATCAGCTAGGGTTACAACAACATGT +
Preference number: 5 (lower is better)
Translates to: VGEVPTGTSSKMREA*IQPTKPSARVTTTC
Trigger: ACATGTTGTTGTAACCCTAGCTGATGGCTTTGTTGGCTGTATCCATGCCTCCCGCATCTTAGATGATGTCCCAGTGGGCACCTCGCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTAACCCTTGGAGGCCGTaGGGAAGGCTGACCACCAGC +
Preference number: 5 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSNPWRP*GRLTTS
Trigger: GCTGGTGGTCAGCCTTCCCAACGGCCTCCAAGGGTT...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp CTTGGCCGAACACTCAGCTCCAGGATGGTCAGAACAAATCTGGGGTaGCTTATTGGGAGAAACTTAGATGTCTTCACATCTCGCCCACCG +
Preference number: 5 (lower is better)
Translates to: LGRTLSSRMVRTNLG*LIGRNLDVFTSRPP
Trigger: CGGTGGGCGAGATGTGAAGACATCTAAGTTTCTCCCAATAAGTCACCCCAGATTTGTTCTGACCATCCTGGAGCTGAGTGTTCGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp TACTCCTTGATGCACTTCACAAAACCAATGAGCAACATTCCGGGCTaGATTTCTGAGAGGCTCTTGGGGTCCTGGCCACCTTCTACTGTG +
Preference number: 5 (lower is better)
Translates to: YSLMHFTKPMSNIPG*ISERLLGSWPPSTV
Trigger: CACAGTAGAAGGTGGCCAGGACCCCAAGAGCCTCTCAGAAATCCAGCCCGGAATGTTGCTCATTGGTTTTGTGAAGTGCATCAAGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGCAAAACCCTGCACTaGACCTCATCCCCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNSKTLH*TSSPGL
Trigger: CAGCCCAGGGGATGAGGTCAAGTGCAGGGTTTTGCT...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGTACCCTTCAACTCACTaGGCCGAACACTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: STGVCPSVLRVQQTLFKEYPSTH*AEHSAP
Trigger: TGGAGCTGAGTGTTCGGCCAAGTGAGTTGAAGGGTA...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp TCTGGATTCTTCCTGTGTCCTCTTGTCTCAGTCCCCAGCCTCCAAACCAGGGCAGAGACATGTGAATACTaGGCCAAACCCAGAACTGAA +
Preference number: 5 (lower is better)
Translates to: SGFFLCPLVSVPSLQTRAETCEY*AKPRTE
Trigger: TTCAGTTCTGGGTTTGGCCAAGTATTCACATGTCTC...TGCCCTGGTTTGGAGGCTGGGGACTGAGACAAGAGGACACAGGAAGAATCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp ACTCCTCCGTTGCTTTTCACCTCTTCAACCACACAGGTCAGGTACTaGCCGACTTTGAACTTAGCACCTTTGTTCTTCTGCCGGATGTAC +
Preference number: 5 (lower is better)
Translates to: TPPLLFTSSTTQVRY*PTLNLAPLFFCRMY
Trigger: GTACATCCGGCAGAAGAACAAAGGTGCTAAGTTCAAAGTCGGCCAGTACCTGACCTGTGTGGTTGAAGAGGTGAAAAGCAACGGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTCACTTGCACAAACCCTaGGAGGCCGTTGGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSHLHKP*EAVGKA
Trigger: AGCCTTCCCAACGGCCTCCAAGGGTTTGTGCAAGTG...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCATCACGTTGTACTTCTaGAAGAAGCAGGTCACAGTC +
Preference number: 5 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVITLYF*KKQVTV
Trigger: GACTGTGACCTGCTTCTTCAAGAAGTACAACGTGAT...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp CTGCTTTTTCTCAGCTTTCTCGTTTTCCTGTTCACCAAGTCCTGGTaGAGGGAGACGTGGACCTCCAACTTCAACATGTCCACGTGTAGA +
Preference number: 5 (lower is better)
Translates to: LLFLSFLVFLFTKSW*RETWTSNFNMSTCR
Trigger: TCTACACGTGGACATGTTGAAGTTGGAGGTCCACGTCTCCCTTCACCAGGACTTGGTGAACAGGAAAACGAGAAAGCTGAGAAAAAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp GCAGGCTCAGTCGCACAACTCTGGTGCGAGGATGGACGCAGAGGATaGAGGCTTTTACCGTTTGATTTGAAGAATAAGATCCCATTTTCT +
Preference number: 5 (lower is better)
Translates to: AGSVAQLWCEDGRRG*RLLPFDLKNKIPFS
Trigger: AGAAAATGGGATCTTATTCTTCAAATCAAACGGTAAAAGCCTGCATCCTCTGCGTCCATCCTCGCACCAGAGTTGTGCGACTGAGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp GGTCACCTTAGCAACGACTGTCTGACCCTCCACAAAGTGTTCACTTaGAGTGGTTACGAACTTGTCACTCATGATAGTTTTGGGGGACAG +
Preference number: 5 (lower is better)
Translates to: GHLSNDCLTLHKVFT*SGYELVTHDSFGGQ
Trigger: CTGTCCCCCAAAACTATCATGAGTGACAAGTTCGTAACCACTCCAAGTGAACACTTTGTGGAGGGTCAGACAGTCGTTGCTAAGGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp TCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAGGTCATAATTAGCTTCTaGGCTTCAGGGTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: STGVCPSVLRVQQTLFKEVIISF*ASGSQS
Trigger: GCTCTGTGACCCTGAAGCCAAGAAGCTAATTATGAC...CTCTTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCTCTTTCTCCTCTCCTTaGTCATCAACTGTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVSFSSP*SSTVSE
Trigger: TTCAGAGACAGTTGATGACAAAGGAGAGGAGAAAGA...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGGGTGTTTCAGAACCTaGAAGCTGAGGGAAGTGAGC +
Preference number: 5 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKGCFRT*KLREVS
Trigger: GCTCACTTCCCTCAGCTTCAAGGTTCTGAAACACCC...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp ATAGCAGGTTCCAGGCCAGCCAAGACCATAATACAAACCCTGTCTCAAAAGATTCGTTTCAGCATCCGGTaGTACAGCTCACCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: IAGSRPAKTIIQTLSQKIRFSIR*YSSPAS
Trigger: GGAAGCTGGTGAGCTGTACAACCGGATGCTGAAACG...AATCTTTTGAGACAGGGTTTGTATTATGGTCTTGGCTGGCCTGGAACCTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 90 bp CTCTGCTTCGATTCATCCACATTGGTCACCTTAGCAACGACTGTCTaGCCCTCCACAAAGTGTTCACTTGGAGTGGTTACGAACTTGTCA +
Preference number: 5 (lower is better)
Translates to: LCFDSSTLVTLATTV*PSTKCSLGVVTNLS
Trigger: TGACAAGTTCGTAACCACTCCAAGTGAACACTTTGTGGAGGGTCAGACAGTCGTTGCTAAGGTGACCAATGTGGATGAATCGAAGCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp CAGGTCAGGTACTGGCCGACTTTGAACTTAGCACCTTTGTTCTTCTaGCGGATGTACTCTTGTGCCTTCTTAAGTGACAGAAAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QVRYWPTLNLAPLFF*RMYSCAFLSDRKAL
Trigger: CAGAGCTTTTCTGTCACTTAAGAAGGCACAAGAGTACATCCGGCAGAAGAACAAAGGTGCTAAGTTCAAAGTCGGCCAGTACCTGACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 90 bp AACACTCAGCTCCAGGATGGTCAGAACAAATCTGGGGTGACTTATTaGGAGAAACTTAGATGTCTTCACATCTCGCCCACCGATCACTCT +
Preference number: 5 (lower is better)
Translates to: NTQLQDGQNKSGVTY*EKLRCLHISPTDHS
Trigger: AGAGTGATCGGTGGGCGAGATGTGAAGACATCTAAGTTTCTCCCAATAAGTCACCCCAGATTTGTTCTGACCATCCTGGAGCTGAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp ATAGCAGGTTCCAGGCCAGCCAAGACCATAATACAAACCCTGTCTCAAAAGATTGGGTTCACAGAAAGCTaGACGCTCTTCTTGCCACTC +
Preference number: 5 (lower is better)
Translates to: IAGSRPAKTIIQTLSQKIGFTES*TLFLPL
Trigger: GAGTGGCAAGAAGAGCGTCAAGCTTTCTGTGAACCC...AATCTTTTGAGACAGGGTTTGTATTATGGTCTTGGCTGGCCTGGAACCTGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp ATAGCAGGTTCCAGGCCAGCCAAGACCATAATACAAACCCTGTCTCAAAAGATTATTCAGGTTCCAGCTTaGCTCCTCAGTTGCGAAGGC +
Preference number: 5 (lower is better)
Translates to: IAGSRPAKTIIQTLSQKIIQVPA*LLSCEG
Trigger: GCCTTCGCAACTGAGGAGCAAAGCTGGAACCTGAAT...AATCTTTTGAGACAGGGTTTGTATTATGGTCTTGGCTGGCCTGGAACCTGCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AAAGGACAAAGTGGGGACCTGACCACGAAATCCACTGGCGTTTGCCCATCTGTCACGTCCTCAATGGAGTaGATTTCTGGATCTTCTATT +
Preference number: 5 (lower is better)
Translates to: KGQSGDLTTKSTGVCPSVTSSME*ISGSSI
Trigger: AATAGAAGATCCAGAAATCAACTCCATTGAGGACGT...GACAGATGGGCAAACGCCAGTGGATTTCGTGGTCAGGTCCCCACTTTGTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCCGGCTCCAGACTTCTTaGGCCTCTTGTTCACTAGTT +
Preference number: 5 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLRLQTS*ASCSLV
Trigger: AACTAGTGAACAAGAGGCCAAAGAAGTCTGGAGCCG...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp TTCCCTAGAAGCTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGCTCCCTCTCCTTCTaGCCCTTCTTCTTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: FPRSLKACCLTTTLSPRNSSLSF*PFFFLA
Trigger: AGCTAAGAAGAAGAAGGGCAAGAAGGAGAGGGAGCT...GTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAGCTTCTAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCAGATGCAGGAAAACCTaGAGAGGCTCGTTGTACTGC +
Preference number: 5 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLRCRKT*RGSLYC
Trigger: GCAGTACAACGAGCCTCTCAAGGTTTTCCTGCATCT...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 90 bp ACAGCCTTAATGGTCCCAGTGACTTTGTCCCCAATAGCCAGGCTATaGCTTTTCTTAGACTTCACAGTCAAGTTCTCTTCTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: TALMVPVTLSPIARL*LFLDFTVKFSSSFS
Trigger: GGAGAAGGAAGAAGAGAACTTGACTGTGAAGTCTAAGAAAAGGCATAGCCTGGCTATTGGGGACAAAGTCACTGGGACCATTAAGGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAAATACAGAGTCTTGGTaGCTCATGAGGCTGCGAATG +
Preference number: 5 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKNTESW*LMRLRM
Trigger: CATTCGCAGCCTCATGAGCAACCAAGACTCTGTATT...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTACAAAGGCACCATATTaGATCCAGACAGCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSTKAPY*IQTAFS
Trigger: GGAGAAGGCTGTCTGGATCAAATATGGTGCCTTTGT...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CTATCCTTAGTAGCTTCGGGTTCCCATGTTTTTCTGGATTCTTCCTGTGTCCTCTTGAAGGCCTCAGCGTaGAATGCTTTCTTAGAATCA +
Preference number: 5 (lower is better)
Translates to: LSLVASGSHVFLDSSCVLLKASA*NAFLES
Trigger: TGATTCTAAGAAAGCATTCAACGCTGAGGCCTTCAA...GAGGACACAGGAAGAATCCAGAAAAACATGGGAACCCGAAGCTACTAAGGATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp CTTAAAAGCCTGCTGTCTAACAACAACACTAAGCCCCAGGAACAGAACAAGAGTAACACGCCATACTCCTaGATGCACTTCACAAAACCA +
Preference number: 5 (lower is better)
Translates to: LKSLLSNNNTKPQEQNKSNTPYS*MHFTKP
Trigger: TGGTTTTGTGAAGTGCATCAAGGAGTATGGCGTGTT...ACTCTTGTTCTGTTCCTGGGGCTTAGTGTTGTTGTTAGACAGCAGGCTTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS-3UTR CAA 90 bp AAATCCACTGGCGTTTGCCCATCTGTCCTTAGAGTGCAGCAAACTCTCTTCAAAGAAACATCAAATAAGTaGTCTTGTTCAACCACCTGC +
Preference number: 5 (lower is better)
Translates to: KSTGVCPSVLRVQQTLFKETSNK*SCSTTC
Trigger: GCAGGTGGTTGAACAAGACAACTTATTTGATGTTTC...TTTGAAGAGAGTTTGCTGCACTCTAAGGACAGATGGGCAAACGCCAGTGGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp GTTCCTGCTCGCTCTCAGACTCCTGGCGCTCCCGCTTaGCTCGCCCACCCCTCTGTGACTTCTGGGGCTCTT +
Preference number: 6 (lower is better)
Translates to: VPARSQTPGAPA*LAHPSVTSGAL
Trigger: AAGAGCCCCAGAAGTCACAGAGGGGTGGGCGAGGCAAGCGGGAGCGCCAGGAGTCTGAGAGCGAGCAGGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp AGTTCCTGCTCGCTCTCAGACTCCTGGCGCTCCCGCTaGCCTCGCCCACCCCTCTGTGACTTCTGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: SSCSLSDSWRSR*PRPPLCDFWGS
Trigger: AGAGCCCCAGAAGTCACAGAGGGGTGGGCGAGGCAAGCGGGAGCGCCAGGAGTCTGAGAGCGAGCAGGAACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp AGCGCCGAGCTCTTGGCCTCCACATACTCCAAGGCCTaGGCCTTGACCGCCTGCACGTCCTTCTCCGTGCCG +
Preference number: 6 (lower is better)
Translates to: SAELLASTYSKA*ALTACTSFSVP
Trigger: CGGCACGGAGAAGGACGTGCAGGCGGTCAAGGCCAAGGCCTTGGAGTATGTGGAGGCCAAGAGCTCGGCGCT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp CAGGCTCCACCTCCTGCCCTGCCCGGTGGTATCTGCTaGCTCTCAGGACCAGGTCAGGCACAGGATCACTAC +
Preference number: 6 (lower is better)
Translates to: QAPPPALPGGIC*LSGPGQAQDHY
Trigger: GTAGTGATCCTGTGCCTGACCTGGTCCTGAGAGCCAGCAGATACCACCGGGCAGGGCAGGAGGTGGAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp GAGCTCTTGGCCTCCACATACTCCAAGGCCTTGGCCTaGACCGCCTGCACGTCCTTCTCCGTGCCGTGCTGC +
Preference number: 6 (lower is better)
Translates to: ELLASTYSKALA*TACTSFSVPCC
Trigger: GCAGCACGGCACGGAGAAGGACGTGCAGGCGGTCAAGGCCAAGGCCTTGGAGTATGTGGAGGCCAAGAGCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp CTAGCACAGCCCCTAGCTGCTGGTAAGAGATGCGGGTaGGTGGACGCCCAGGATGCAGGAAGATGGGGCGCA +
Preference number: 6 (lower is better)
Translates to: LAQPLAAGKRCG*VDAQDAGRWGA
Trigger: TGCGCCCCATCTTCCTGCATCCTGGGCGTCCACTCACCCGCATCTCTTACCAGCAGCTAGGGGCTGTGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp AGCTCTTGGCCTCCACATACTCCAAGGCCTTGGCCTTaGCCGCCTGCACGTCCTTCTCCGTGCCGTGCTGCT +
Preference number: 6 (lower is better)
Translates to: SSWPPHTPRPWP*PPARPSPCRAA
Trigger: AGCAGCACGGCACGGAGAAGGACGTGCAGGCGGTCAAGGCCAAGGCCTTGGAGTATGTGGAGGCCAAGAGCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp GCAGCTCTTCCAGGCACTGGCACAGGAGGAGGAAGCTaGTGCTGGCCGAATCCCCCAGACTGCAGTCTGACA +
Preference number: 6 (lower is better)
Translates to: AALPGTGTGGGS*CWPNPPDCSLT
Trigger: TGTCAGACTGCAGTCTGGGGGATTCGGCCAGCACCAGCTTCCTCCTCCTGTGCCAGTGCCTGGAAGAGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp TTGTTCACTAGTTCCTGCTCGCTCTCAGACTCCTGGCGCTCCCGCTaGCCTCGCCCACCCCTCTGTGACTTCTGGGGCTCTTCCTTCTCC +
Preference number: 6 (lower is better)
Translates to: LFTSSCSLSDSWRSR*PRPPLCDFWGSSFS
Trigger: GGAGAAGGAAGAGCCCCAGAAGTCACAGAGGGGTGGGCGAGGCAAGCGGGAGCGCCAGGAGTCTGAGAGCGAGCAGGAACTAGTGAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp TTAGCGCGCTCCACGTCCCCGAGCTGGAACTCCAGCTGGGCAAACTaGACGATCACATCCACATGTTCCTTGGCGGGCAGGCACTCCAGG +
Preference number: 6 (lower is better)
Translates to: LARSTSPSWNSSWAN*TITSTCSLAGRHSR
Trigger: CCTGGAGTGCCTGCCCGCCAAGGAACATGTGGATGTGATCGTCAAGTTTGCCCAGCTGGAGTTCCAGCTCGGGGACGTGGAGCGCGCTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp AGTCATCCGCAGACTCTGGCTGTCGCCCAGGGTCCATaGGTGCCTCCTCAATGCGCGACAGCTCCTTCTCTG +
Preference number: 6 (lower is better)
Translates to: SHPQTLAVAQGP*VPPQCATAPSL
Trigger: CAGAGAAGGAGCTGTCGCGCATTGAGGAGGCACTCATGGACCCTGGGCGACAGCCAGAGTCTGCGGATGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp GGAAGATGGGGCGCAGGCTCAGTCGCACAACTCTGGTaGGAGGATGGACGCAGAGGATGCAGGCTTTTACCG +
Preference number: 6 (lower is better)
Translates to: GRWGAGSVAQLW*EDGRRGCRLLP
Trigger: CGGTAAAAGCCTGCATCCTCTGCGTCCATCCTCGCACCAGAGTTGTGCGACTGAGCCTGCGCCCCATCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp CCCTGGGGACGTCTGGGTCAACAACGGTGGCCTCGATaGCCTGCCCAACCTGGAACTTCTTGTCTGGGTGTT +
Preference number: 6 (lower is better)
Translates to: PWGRLGQQRWPR*PAQPGTSCLGV
Trigger: AACACCCAGACAAGAAGTTCCAGGTTGGGCAGGCCATCGAGGCCACCGTTGTTGACCCAGACGTCCCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp CCCTCTCAGCCACAGCCCGGGCCTTCTCGATCTCCGTaGCCTGTAGGTGGAAAGCCATGTACTGCAGCCAAA +
Preference number: 6 (lower is better)
Translates to: PSQPQPGPSRSP*PVGGKPCTAAK
Trigger: TTTGGCTGCAGTACATGGCTTTCCACCTACAGGCCACGGAGATCGAGAAGGCCCGGGCTGTGGCTGAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp GCCAAAATCAGACCGGTCACTCCCGGTTCTGTGGTCTaGAGGGTAAGGCAGACACCCTGCCCCACACGCAGC +
Preference number: 6 (lower is better)
Translates to: AKIRPVTPGSVV*RVRQTPCPTRS
Trigger: GCTGCGTGTGGGGCAGGGTGTCTGCCTTACCCTCAAGACCACAGAACCGGGAGTGACCGGTCTGATTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp AAAGCAGGGGTGTTATGGGGCAGGATGGCCACCTCCAGCCCGGTTTaGGTCTTCTCCAGGACCTTCACATCCACCAACTGCCCGATGCGC +
Preference number: 6 (lower is better)
Translates to: KAGVLWGRMATSSPV*VFSRTFTSTNCPMR
Trigger: GCGCATCGGGCAGTTGGTGGATGTGAAGGTCCTGGAGAAGACCAAAACCGGGCTGGAGGTGGCCATCCTGCCCCATAACACCCCTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp GCAGGAAGATGGGGCGCAGGCTCAGTCGCACAACTCTaGTGCGAGGATGGACGCAGAGGATGCAGGCTTTTA +
Preference number: 6 (lower is better)
Translates to: AGRWGAGSVAQL*CEDGRRGCRLL
Trigger: TAAAAGCCTGCATCCTCTGCGTCCATCCTCGCACCAGAGTTGTGCGACTGAGCCTGCGCCCCATCTTCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp GTAGGCGTCACAGACTTCGGTCACTTGCACAAACCCTaGGAGGCCGTTGGGAAGGCTGACCACCAGCTCCAG +
Preference number: 6 (lower is better)
Translates to: VGVTDFGHLHKP*EAVGKADHQLQ
Trigger: CTGGAGCTGGTGGTCAGCCTTCCCAACGGCCTCCAAGGGTTTGTGCAAGTGACCGAAGTCTGTGACGCCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp TCCACGTCCCCGAGCTGGAACTCCAGCTGGGCAAACTaGACGATCACATCCACATGTTCCTTGGCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: STSPSWNSSWAN*TITSTCSLAGR
Trigger: CCTGCCCGCCAAGGAACATGTGGATGTGATCGTCAAGTTTGCCCAGCTGGAGTTCCAGCTCGGGGACGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp TCCCACCAACGCCAATGTCCACTAGGTAGCCATGGTCTTCCAGGCTaGACACTGTGCCTGTCAGCAGCATGCCAGGCCTCAGGGCATCAG +
Preference number: 6 (lower is better)
Translates to: SHQRQCPLGSHGLPG*TLCLSAACQASGHQ
Trigger: CTGATGCCCTGAGGCCTGGCATGCTGCTGACAGGCACAGTGTCAAGCCTGGAAGACCATGGCTACCTAGTGGACATTGGCGTTGGTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp CTTCTGAGTGTAGGCGTCACAGACTTCGGTCACTTGCACAAACCCTaGGAGGCCGTTGGGAAGGCTGACCACCAGCTCCAGCTCACTCAC +
Preference number: 6 (lower is better)
Translates to: LLSVGVTDFGHLHKP*EAVGKADHQLQLTH
Trigger: GTGAGTGAGCTGGAGCTGGTGGTCAGCCTTCCCAACGGCCTCCAAGGGTTTGTGCAAGTGACCGAAGTCTGTGACGCCTACACTCAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp ACACCACTGTCGTCTTCTTCTGCGGCTCCAGACTTCTTTGGCCTCTaGTTCACTAGTTCCTGCTCGCTCTCAGACTCCTGGCGCTCCCGC +
Preference number: 6 (lower is better)
Translates to: TPLSSSSAAPDFFGL*FTSSCSLSDSWRSR
Trigger: GCGGGAGCGCCAGGAGTCTGAGAGCGAGCAGGAACTAGTGAACAAGAGGCCAAAGAAGTCTGGAGCCGCAGAAGAAGACGACAGTGGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp TCACTTGCACAAACCCTTGGAGGCCGTTGGGAAGGCTaGCCACCAGCTCCAGCTCACTCACCTCCTTCACAC +
Preference number: 6 (lower is better)
Translates to: SLAQTLGGRWEG*PPAPAHSPPSH
Trigger: GTGTGAAGGAGGTGAGTGAGCTGGAGCTGGTGGTCAGCCTTCCCAACGGCCTCCAAGGGTTTGTGCAAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp CACCCGGATCCTTTGGCCGCGAGTCACTCAACAGTCTaGAGGACAGGAGCATCCTCTCCTTGGAAGGCTCAC +
Preference number: 6 (lower is better)
Translates to: HPDPLAASHSTV*RTGASSPWKAH
Trigger: GTGAGCCTTCCAAGGAGAGGATGCTCCTGTCCTTCAGACTGTTGAGTGACTCGCGGCCAAAGGATCCGGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp ACCAACTGCCCGATGCGCACAGCTCCTGTTTTCTTCTaGCTGCTCTCAACACCCGGATCCTTTGGCCGCGAG +
Preference number: 6 (lower is better)
Translates to: TNCPMRTAPVFF*LLSTPGSFGRE
Trigger: CTCGCGGCCAAAGGATCCGGGTGTTGAGAGCAGTCAGAAGAAAACAGGAGCTGTGCGCATCGGGCAGTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp CTTCTTAGCTTGGTGCGGCTGCTCATCCTCGCTGTCTaGGCTCTCTTCTCGGAGTGGCAAGGCTGGAGTCAG +
Preference number: 6 (lower is better)
Translates to: LLSLVRLLILAV*ALFSEWQGWSQ
Trigger: CTGACTCCAGCCTTGCCACTCCGAGAAGAGAGCTCAGACAGCGAGGATGAGCAGCCGCACCAAGCTAAGAAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp AGGCAGGCGGAGCAGGTCCTCCAGAGGTTCTTCTTGTaGCACCTGCTCATTCAGCTTCTGAGTGTAGGCGTC +
Preference number: 6 (lower is better)
Translates to: RQAEQVLQRFFL*HLLIQLLSVGV
Trigger: GACGCCTACACTCAGAAGCTGAATGAGCAGGTGGCACAAGAAGAACCTCTGGAGGACCTGCTCCGCCTGCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp ACTGCCCGATGCGCACAGCTCCTGTTTTCTTCTGACTaGTCTCAACACCCGGATCCTTTGGCCGCGAGTCAC +
Preference number: 6 (lower is better)
Translates to: TARCAQLLFSSD*SQHPDPLAASH
Trigger: GTGACTCGCGGCCAAAGGATCCGGGTGTTGAGAGCAGTCAGAAGAAAACAGGAGCTGTGCGCATCGGGCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp CCCGGTTCTGTGGTCTTGAGGGTAAGGCAGACACCCTaGCCCACACGCAGCTTCTCAGAGTCAAAGTGGAAG +
Preference number: 6 (lower is better)
Translates to: PGSVVLRVRQTP*PTRSFSESKWK
Trigger: CTTCCACTTTGACTCTGAGAAGCTGCGTGTGGGGCAGGGTGTCTGCCTTACCCTCAAGACCACAGAACCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp GGGACGTCTGGGTCAACAACGGTGGCCTCGATGGCCTaGCCAACCTGGAACTTCTTGTCTGGGTGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: GTSGSTTVASMA*PTWNFLSGCFR
Trigger: TCTGAAACACCCAGACAAGAAGTTCCAGGTTGGGCAGGCCATCGAGGCCACCGTTGTTGACCCAGACGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp GCTCCAGACTTCTTTGGCCTCTTGTTCACTAGTTCCTaGTCGCTCTCAGACTCCTGGCGCTCCCGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: APDFFGLLFTSS*SLSDSWRSRLP
Trigger: AGGCAAGCGGGAGCGCCAGGAGTCTGAGAGCGAGCAGGAACTAGTGAACAAGAGGCCAAAGAAGTCTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp TGTTATGGGGCAGGATGGCCACCTCCAGCCCGGTTTTaGTCTTCTCCAGGACCTTCACATCCACCAACTGCC +
Preference number: 6 (lower is better)
Translates to: CYGAGWPPPARF*SSPGPSHPPTA
Trigger: GGCAGTTGGTGGATGTGAAGGTCCTGGAGAAGACCAAAACCGGGCTGGAGGTGGCCATCCTGCCCCATAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp GAGCAGGAGAGAACACGTCTGGCCTCCCAGTGTCGCTaGGAAGGAGCGACAGCTCTATCAGGTTCTTCATGG +
Preference number: 6 (lower is better)
Translates to: EQERTRLASQCR*EGATALSGSSW
Trigger: CCATGAAGAACCTGATAGAGCTGTCGCTCCTTCCCAGCGACACTGGGAGGCCAGACGTGTTCTCTCCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp CTCTTGTTTTGGTTCTGGAGCAGGAGAGAACACGTCTaGCCTCCCAGTGTCGCTGGGAAGGAGCGACAGCTC +
Preference number: 6 (lower is better)
Translates to: LLFWFWSRREHV*PPSVAGKERQL
Trigger: GAGCTGTCGCTCCTTCCCAGCGACACTGGGAGGCCAGACGTGTTCTCTCCTGCTCCAGAACCAAAACAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp GTGTTATGGGGCAGGATGGCCACCTCCAGCCCGGTTTaGGTCTTCTCCAGGACCTTCACATCCACCAACTGC +
Preference number: 6 (lower is better)
Translates to: VLWGRMATSSPV*VFSRTFTSTNC
Trigger: GCAGTTGGTGGATGTGAAGGTCCTGGAGAAGACCAAAACCGGGCTGGAGGTGGCCATCCTGCCCCATAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp CTGCTCATTCAGCTTCTGAGTGTAGGCGTCACAGACTTCGGTCACTaGCACAAACCCTTGGAGGCCGTTGGGAAGGCTGACCACCAGCTC +
Preference number: 6 (lower is better)
Translates to: LLIQLLSVGVTDFGH*HKPLEAVGKADHQL
Trigger: GAGCTGGTGGTCAGCCTTCCCAACGGCCTCCAAGGGTTTGTGCAAGTGACCGAAGTCTGTGACGCCTACACTCAGAAGCTGAATGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp CCCCTGGGCTGTACTTCTTCTCTGGGTTCTTCATCATaGTGTCAGCCAGGTGCATGGAGGGCACCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: PLGCTSSLGSSS*CQPGAWRAPGL
Trigger: AAGGCCTGGTGCCCTCCATGCACCTGGCTGACATCATGATGAAGAACCCAGAGAAGAAGTACAGCCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp CCAGCACACGGTGTGCTGTGGACAGGATGTAACATCTaGCAATCTTCTGGGGGCAGAAGTCCTCCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: PAHGVLWTGCNI*QSSGGRSPPGV
Trigger: CACCCCTGGAGGACTTCTGCCCCCAGAAGATTGTCAGATGTTACATCCTGTCCACAGCACACCGTGTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp TGCACAGCTCGCTCGAAGACCTTAGTCAGGGACTCCTaGGAGCCGTACATGTTTTCCAGGTTCAGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: CTARSKTLVRDS*EPYMFSRFSRA
Trigger: GGCCCTGCTGAACCTGGAAAACATGTACGGCTCTCAGGAGTCCCTGACTAAGGTCTTCGAGCGAGCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp CTGGCTGCCGTGCTTGATGGTCATGTCGATGTAGACTaGCCAGACGTCTGTGCGTTTGGGGTAGGTGCTCAG +
Preference number: 6 (lower is better)
Translates to: LAAVLDGHVDVD*PDVCAFGVGAQ
Trigger: CTGAGCACCTACCCCAAACGCACAGACGTCTGGTCAGTCTACATCGACATGACCATCAAGCACGGCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp GGGTCAACAACGGTGGCCTCGATGGCCTGCCCAACCTGGAACTTCTaGTCTGGGTGTTTCAGAACCTTGAAGCTGAGGGAAGTGAGCAAC +
Preference number: 6 (lower is better)
Translates to: GSTTVASMACPTWNF*SGCFRTLKLREVSN
Trigger: GTTGCTCACTTCCCTCAGCTTCAAGGTTCTGAAACACCCAGACAAGAAGTTCCAGGTTGGGCAGGCCATCGAGGCCACCGTTGTTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp GTGAGTGCTCCCCGGTTTGAAGGCCTCAGCGTTGAATaGTTTCTTAGAATCAGAGAGATGGCTGACCCGGGC +
Preference number: 6 (lower is better)
Translates to: VSAPRFEGLSVE*FLRIREMADPG
Trigger: GCCCGGGTCAGCCATCTCTCTGATTCTAAGAAAGCATTCAACGCTGAGGCCTTCAAACCGGGGAGCACTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp GCCAGATGCAGGAAAACCTTGAGAGGCTCGTTGTACTaGACAGCTCGCTCGAAGACCTTAGTCAGGGACTCC +
Preference number: 6 (lower is better)
Translates to: ARCRKTLRGSLY*TARSKTLVRDS
Trigger: GGAGTCCCTGACTAAGGTCTTCGAGCGAGCTGTGCAGTACAACGAGCCTCTCAAGGTTTTCCTGCATCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp CACCTTTACCACCTGGCCAGTGTAAAAGACCGTCTCTaGGTCCGGGATGTGCTGGGTGCTAAGCTCATGCTT +
Preference number: 6 (lower is better)
Translates to: HLYHLASVKDRL*VRDVLGAKLML
Trigger: AAGCATGAGCTTAGCACCCAGCACATCCCGGACCCAGAGACGGTCTTTTACACTGGCCAGGTGGTAAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp GGAAAGCCATGTACTGCAGCCAAAGGATGGAGCTGTTaGGAGAGCTTAGCACCAGCCGGTCAAAGTCATCCG +
Preference number: 6 (lower is better)
Translates to: GKPCTAAKGWSC*ESLAPAGQSHP
Trigger: CGGATGACTTTGACCGGCTGGTGCTAAGCTCTCCCAACAGCTCCATCCTTTGGCTGCAGTACATGGCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp CCTGTAGGTGGAAAGCCATGTACTGCAGCCAAAGGATaGAGCTGTTGGGAGAGCTTAGCACCAGCCGGTCAA +
Preference number: 6 (lower is better)
Translates to: PVGGKPCTAAKG*SCWESLAPAGQ
Trigger: TTGACCGGCTGGTGCTAAGCTCTCCCAACAGCTCCATCCTTTGGCTGCAGTACATGGCTTTCCACCTACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp TCAAAAATGGCTTTAGCGCGCTCCACGTCCCCGAGCTaGAACTCCAGCTGGGCAAACTTGACGATCACATCC +
Preference number: 6 (lower is better)
Translates to: SKMALARSTSPS*NSSWANLTITS
Trigger: GGATGTGATCGTCAAGTTTGCCCAGCTGGAGTTCCAGCTCGGGGACGTGGAGCGCGCTAAAGCCATTTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp CCTGTCAGCAGCATGCCAGGCCTCAGGGCATCAGCACTCAGCACTTaGTTGACACGTTTGGGGTTCACAGAAAGCTTGACGCTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: PVSSMPGLRASALST*LTRLGFTESLTLFL
Trigger: CAAGAAGAGCGTCAAGCTTTCTGTGAACCCCAAACGTGTCAACAAAGTGCTGAGTGCTGATGCCCTGAGGCCTGGCATGCTGCTGACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp ACACTTCCACACCACTGTCGTCTTCTTCTGCGGCTCCAGACTTCTTaGGCCTCTTGTTCACTAGTTCCTGCTCGCTCTCAGACTCCTGGC +
Preference number: 6 (lower is better)
Translates to: TLPHHCRLLLRLQTS*ASCSLVPARSQTPG
Trigger: GCCAGGAGTCTGAGAGCGAGCAGGAACTAGTGAACAAGAGGCCAAAGAAGTCTGGAGCCGCAGAAGAAGACGACAGTGGTGTGGAAGTGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp ATGTGTCTCTCACTCTGGCTCAAACACAGAACTCGGTaGAGGGTGTCACCTGTCTGGAGCCAGTGGTGCAAC +
Preference number: 6 (lower is better)
Translates to: MCLSLWLKHRTR*RVSPVWSQWCN
Trigger: GTTGCACCACTGGCTCCAGACAGGTGACACCCTTCACCGAGTTCTGTGTTTGAGCCAGAGTGAGAGACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp TGCTCCTCAGTTGCGAAGGCAGAGGAAACCTCGGAGTaGTCTACAGAGAGACTCACAACTCCTCCGTTGCTT +
Preference number: 6 (lower is better)
Translates to: CSSVAKAEETSE*STERLTTPPLL
Trigger: AAGCAACGGAGGAGTTGTGAGTCTCTCTGTAGAGCACTCCGAGGTTTCCTCTGCCTTCGCAACTGAGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp CTGCAGTCTGACAGCCGCAGAGACAGCAGCATCCTCTaGTTCGATTCATCCACATTGGTCACCTTAGCAACG +
Preference number: 6 (lower is better)
Translates to: LQSDSRRDSSIL*FDSSTLVTLAT
Trigger: CGTTGCTAAGGTGACCAATGTGGATGAATCGAAGCAGAGGATGCTGCTGTCTCTGCGGCTGTCAGACTGCAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp AGAGAAAGCCACAAGGTGGCCAGTCTCCACCAAGGATaGCACGGCAAAGGACTCTTCCAGATGCTGTACGAT +
Preference number: 6 (lower is better)
Translates to: RESHKVASLHQG*HGKGLFQMLYD
Trigger: ATCGTACAGCATCTGGAAGAGTCCTTTGCCGTGGCATCCTTGGTGGAGACTGGCCACCTTGTGGCTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp TCCTTCTTGCCCTTCTTCTTCTTAGCTTGGTGCGGCTaGTCATCCTCGCTGTCTGAGCTCTCTTCTCGGAGT +
Preference number: 6 (lower is better)
Translates to: SFLPFFFLAWCG*SSSLSELSSRS
Trigger: ACTCCGAGAAGAGAGCTCAGACAGCGAGGATGAGCAGCCGCACCAAGCTAAGAAGAAGAAGGGCAAGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp AGCATGCCAGGCCTCAGGGCATCAGCACTCAGCACTTaGTTGACACGTTTGGGGTTCACAGAAAGCTTGACG +
Preference number: 6 (lower is better)
Translates to: SMPGLRASALST*LTRLGFTESLT
Trigger: CGTCAAGCTTTCTGTGAACCCCAAACGTGTCAACAAAGTGCTGAGTGCTGATGCCCTGAGGCCTGGCATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp TCGTCTTCTTCTGCGGCTCCAGACTTCTTTGGCCTCTaGTTCACTAGTTCCTGCTCGCTCTCAGACTCCTGG +
Preference number: 6 (lower is better)
Translates to: SSSSAAPDFFGL*FTSSCSLSDSW
Trigger: CCAGGAGTCTGAGAGCGAGCAGGAACTAGTGAACAAGAGGCCAAAGAAGTCTGGAGCCGCAGAAGAAGACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp CACCACTGTCGTCTTCTTCTGCGGCTCCAGACTTCTTaGGCCTCTTGTTCACTAGTTCCTGCTCGCTCTCAG +
Preference number: 6 (lower is better)
Translates to: HHCRLLLRLQTS*ASCSLVPARSQ
Trigger: CTGAGAGCGAGCAGGAACTAGTGAACAAGAGGCCAAAGAAGTCTGGAGCCGCAGAAGAAGACGACAGTGGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp ACAGCCTTCTCCTGCCGGAACCGTTTCAGCATCCGGTaGTACAGCTCACCAGCTTCCTTGTATTTCTCGGAC +
Preference number: 6 (lower is better)
Translates to: TAFSCRNRFSIR*YSSPASLYFSD
Trigger: GTCCGAGAAATACAAGGAAGCTGGTGAGCTGTACAACCGGATGCTGAAACGGTTCCGGCAGGAGAAGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp ATGCCAGGCCTCAGGGCATCAGCACTCAGCACTTTGTTGACACGTTaGGGGTTCACAGAAAGCTTGACGCTCTTCTTGCCACTCTCTGTG +
Preference number: 6 (lower is better)
Translates to: MPGLRASALSTLLTR*GFTESLTLFLPLSV
Trigger: CACAGAGAGTGGCAAGAAGAGCGTCAAGCTTTCTGTGAACCCCAAACGTGTCAACAAAGTGCTGAGTGCTGATGCCCTGAGGCCTGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp GAGGAAACCTCGGAGTGCTCTACAGAGAGACTCACAACTCCTCCGTaGCTTTTCACCTCTTCAACCACACAGGTCAGGTACTGGCCGACT +
Preference number: 6 (lower is better)
Translates to: EETSECSTERLTTPP*LFTSSTTQVRYWPT
Trigger: AGTCGGCCAGTACCTGACCTGTGTGGTTGAAGAGGTGAAAAGCAACGGAGGAGTTGTGAGTCTCTCTGTAGAGCACTCCGAGGTTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp ACTTTCCCTATCTTCCCAAAAGGGAAGGAGACGGTCAGTCCCCTGTaGGGTACAACCTTCATCACTCGGCCCATGGCCACTTCACCTTCT +
Preference number: 6 (lower is better)
Translates to: TFPIFPKGKETVSPL*GTTFITRPMATSPS
Trigger: AGAAGGTGAAGTGGCCATGGGCCGAGTGATGAAGGTTGTACCCAACAGGGGACTGACCGTCTCCTTCCCTTTTGGGAAGATAGGGAAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp CACAAAACCAATGAGCAACATTCCGGGCTGGATTTCTaGGAGGCTCTTGGGGTCCTGGCCACCTTCTACTGT +
Preference number: 6 (lower is better)
Translates to: HKTNEQHSGLDF*EALGVLATFYC
Trigger: ACAGTAGAAGGTGGCCAGGACCCCAAGAGCCTCTCAGAAATCCAGCCCGGAATGTTGCTCATTGGTTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp CAAGTGTCTGGATCAATACAGAGTCTTGGTTGCTCATaGGGCTGCGAATGCCCTGCAGCTCTTCCAGGCACT +
Preference number: 6 (lower is better)
Translates to: QVSGSIQSLGCS*GCECPAALPGT
Trigger: AGTGCCTGGAAGAGCTGCAGGGCATTCGCAGCCTCATGAGCAACCAAGACTCTGTATTGATCCAGACACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp TTCTTCTCTGGGTTCTTCATCATGATGTCAGCCAGGTaGATGGAGGGCACCAGGCCTTTTATCTGCTCACCC +
Preference number: 6 (lower is better)
Translates to: FFSGFFIMMSAR*MEGTRPFICSP
Trigger: GGGTGAGCAGATAAAAGGCCTGGTGCCCTCCATGCACCTGGCTGACATCATGATGAAGAACCCAGAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp TGTTTTCTTCTGACTGCTCTCAACACCCGGATCCTTTaGCCGCGAGTCACTCAACAGTCTGAAGGACAGGAG +
Preference number: 6 (lower is better)
Translates to: CFLLTALNTRIL*PRVTQQSEGQE
Trigger: CTCCTGTCCTTCAGACTGTTGAGTGACTCGCGGCCAAAGGATCCGGGTGTTGAGAGCAGTCAGAAGAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp CTGAGAGGCTCTTGGGGTCCTGGCCACCTTCTACTGTaGAGACCAAAGCTGGTTTCCTGCAAAGAAGAATGT +
Preference number: 6 (lower is better)
Translates to: LRGSWGPGHLLL*RPKLVSCKEEC
Trigger: ACATTCTTCTTTGCAGGAAACCAGCTTTGGTCTCCACAGTAGAAGGTGGCCAGGACCCCAAGAGCCTCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp TCAAGGACCATCCCCGGGGTCATGTCAGCAAGTGTCTaGATCAATACAGAGTCTTGGTTGCTCATGAGGCTG +
Preference number: 6 (lower is better)
Translates to: SRTIPGVMSASV*INTESWLLMRL
Trigger: CAGCCTCATGAGCAACCAAGACTCTGTATTGATCCAGACACTTGCTGACATGACCCCGGGGATGGTCCTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp GTGCCCACTGGGACATCATCTAAGATGCGGGAGGCATaGATACAGCCAACAAAGCCATCAGCTAGGGTTACA +
Preference number: 6 (lower is better)
Translates to: VPTGTSSKMREA*IQPTKPSARVT
Trigger: TGTAACCCTAGCTGATGGCTTTGTTGGCTGTATCCATGCCTCCCGCATCTTAGATGATGTCCCAGTGGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp ACACGTTTGGGGTTCACAGAAAGCTTGACGCTCTTCTaGCCACTCTCTGTGACATCCAGGCTGCTCACCACA +
Preference number: 6 (lower is better)
Translates to: TRLGFTESLTLF*PLSVTSRLLTT
Trigger: TGTGGTGAGCAGCCTGGATGTCACAGAGAGTGGCAAGAAGAGCGTCAAGCTTTCTGTGAACCCCAAACGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp ATGTCAGCCAGATGCAGGAAAACCTTGAGAGGCTCGTaGTACTGCACAGCTCGCTCGAAGACCTTAGTCAGG +
Preference number: 6 (lower is better)
Translates to: MSARCRKTLRGS*YCTARSKTLVR
Trigger: CCTGACTAAGGTCTTCGAGCGAGCTGTGCAGTACAACGAGCCTCTCAAGGTTTTCCTGCATCTGGCTGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp TCAGCACTCAGCACTTTGTTGACACGTTTGGGGTTCACAGAAAGCTaGACGCTCTTCTTGCCACTCTCTGTGACATCCAGGCTGCTCACC +
Preference number: 6 (lower is better)
Translates to: SALSTLLTRLGFTES*TLFLPLSVTSRLLT
Trigger: GGTGAGCAGCCTGGATGTCACAGAGAGTGGCAAGAAGAGCGTCAAGCTTTCTGTGAACCCCAAACGTGTCAACAAAGTGCTGAGTGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp GGTCCGATGTCCACTTCAAGCCACTTCTTCATCACGTTGTACTTCTaGAAGAAGCAGGTCACAGTCTGCCCAGCCTGGTACTGCCTGATC +
Preference number: 6 (lower is better)
Translates to: GPMSTSSHFFITLYF*KKQVTVCPAWYCLI
Trigger: GATCAGGCAGTACCAGGCTGGGCAGACTGTGACCTGCTTCTTCAAGAAGTACAACGTGATGAAGAAGTGGCTTGAAGTGGACATCGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp AGTCCACTGAGACCTGAGGGGAACTGGACGAACACGCCATACTCCTaGATGCACTTCACAAAACCAATGAGCAACATTCCGGGCTGGATT +
Preference number: 6 (lower is better)
Translates to: SPLRPEGNWTNTPYS*MHFTKPMSNIPGWI
Trigger: AATCCAGCCCGGAATGTTGCTCATTGGTTTTGTGAAGTGCATCAAGGAGTATGGCGTGTTCGTCCAGTTCCCCTCAGGTCTCAGTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp GGAGTCCAAACTGAGTTACCTTCTGCACCTGGGCTTTaGCCAGCAGCCCTGGTAGTAAGTTATTCAGGTTCC +
Preference number: 6 (lower is better)
Translates to: GVQTELPSAPGL*PAALVVSYSGS
Trigger: GGAACCTGAATAACTTACTACCAGGGCTGCTGGTCAAAGCCCAGGTGCAGAAGGTAACTCAGTTTGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp TGGCTCTCAGGACCAGGTCAGGCACAGGATCACTACTaGACACCACTGAACCATCTTCTAACACCTCATGGA +
Preference number: 6 (lower is better)
Translates to: WLSGPGQAQDHY*TPLNHLLTPHG
Trigger: TCCATGAGGTGTTAGAAGATGGTTCAGTGGTGTTCAGTAGTGATCCTGTGCCTGACCTGGTCCTGAGAGCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp CGGAGTGCTCTACAGAGAGACTCACAACTCCTCCGTTaGTTTTCACCTCTTCAACCACACAGGTCAGGTACT +
Preference number: 6 (lower is better)
Translates to: RSALQRDSQLLR*FSPLQPHRSGT
Trigger: AGTACCTGACCTGTGTGGTTGAAGAGGTGAAAAGCAACGGAGGAGTTGTGAGTCTCTCTGTAGAGCACTCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp TCCACCAAGGATGCCACGGCAAAGGACTCTTCCAGATaGTGTACGATTCCCTGGTGTCTACTGCTTTTTCTC +
Preference number: 6 (lower is better)
Translates to: STKDATAKDSSR*CTIPWCLLLFL
Trigger: GAGAAAAAGCAGTAGACACCAGGGAATCGTACAGCATCTGGAAGAGTCCTTTGCCGTGGCATCCTTGGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp ACAAAGGCACCATATTTGATCCAGACAGCCTTCTCCTaGCGGAACCGTTTCAGCATCCGGTTGTACAGCTCA +
Preference number: 6 (lower is better)
Translates to: TKAPYLIQTAFS*RNRFSIRLYSS
Trigger: TGAGCTGTACAACCGGATGCTGAAACGGTTCCGGCAGGAGAAGGCTGTCTGGATCAAATATGGTGCCTTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp GCTCACCCACCTTCACCAGGATCCCAAATGGCTTTATaGCCAGCACTGTGCCCTTTACTACTGTCCCTATTT +
Preference number: 6 (lower is better)
Translates to: AHPPSPGSQMAL*PALCPLLLSLF
Trigger: AAATAGGGACAGTAGTAAAGGGCACAGTGCTGGCCATAAAGCCATTTGGGATCCTGGTGAAGGTGGGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp CTCAGGGCATCAGCACTCAGCACTTTGTTGACACGTTaGGGGTTCACAGAAAGCTTGACGCTCTTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: LRASALSTLLTR*GFTESLTLFLP
Trigger: TGGCAAGAAGAGCGTCAAGCTTTCTGTGAACCCCAAACGTGTCAACAAAGTGCTGAGTGCTGATGCCCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp CTTGGAGTGGTTACGAACTTGTCACTCATGATAGTTTaGGGGGACAGTCCACTGAGACCTGAGGGGAACTGG +
Preference number: 6 (lower is better)
Translates to: LGVVTNLSLMIV*GDSPLRPEGNW
Trigger: CCAGTTCCCCTCAGGTCTCAGTGGACTGTCCCCCAAAACTATCATGAGTGACAAGTTCGTAACCACTCCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp GTTCTTCTGCCGGATGTACTCTTGTGCCTTCTTAAGTaGCAGAAAAGCTCTGGTCCCACCAACGCCAATGTC +
Preference number: 6 (lower is better)
Translates to: VLLPDVLLCLLK*QKSSGPTNANV
Trigger: GACATTGGCGTTGGTGGGACCAGAGCTTTTCTGTCACTTAAGAAGGCACAAGAGTACATCCGGCAGAAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp TGGCCACTTCACCTTCTTCAAGTCTGTAAGGTCCTATaGGTGACAGACATAAGAAAGCCCTGGGGACGTCTG +
Preference number: 6 (lower is better)
Translates to: WPLHLLQVCKVL*VTDIRKPWGRL
Trigger: CAGACGTCCCCAGGGCTTTCTTATGTCTGTCACTCATAGGACCTTACAGACTTGAAGAAGGTGAAGTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp ACTTGGCCAAACCCAGAACTGAAGGTCCAAGGCCTATaGTCACACTGCTTGGCAGGACACATTTCACATAGC +
Preference number: 6 (lower is better)
Translates to: TWPNPELKVQGL*SHCLAGHISHS
Trigger: GCTATGTGAAATGTGTCCTGCCAAGCAGTGTGATCATAGGCCTTGGACCTTCAGTTCTGGGTTTGGCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp CCTTCAACTCACTTGGCCGAACACTCAGCTCCAGGATaGTCAGAACAAATCTGGGGTGACTTATTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: PSTHLAEHSAPG*SEQIWGDLLGE
Trigger: TTCTCCCAATAAGTCACCCCAGATTTGTTCTGACCATCCTGGAGCTGAGTGTTCGGCCAAGTGAGTTGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp AGCACTTTGTTGACACGTTTGGGGTTCACAGAAAGCTaGACGCTCTTCTTGCCACTCTCTGTGACATCCAGG +
Preference number: 6 (lower is better)
Translates to: STLLTRLGFTES*TLFLPLSVTSR
Trigger: CCTGGATGTCACAGAGAGTGGCAAGAAGAGCGTCAAGCTTTCTGTGAACCCCAAACGTGTCAACAAAGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp ACCTCTTCAACCACACAGGTCAGGTACTGGCCGACTTaGAACTTAGCACCTTTGTTCTTCTGCCGGATGTAC +
Preference number: 6 (lower is better)
Translates to: TSSTTQVRYWPT*NLAPLFFCRMY
Trigger: GTACATCCGGCAGAAGAACAAAGGTGCTAAGTTCAAAGTCGGCCAGTACCTGACCTGTGTGGTTGAAGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp AGACCTGAGGGGAACTGGACGAACACGCCATACTCCTaGATGCACTTCACAAAACCAATGAGCAACATTCCG +
Preference number: 6 (lower is better)
Translates to: RPEGNWTNTPYS*MHFTKPMSNIP
Trigger: CGGAATGTTGCTCATTGGTTTTGTGAAGTGCATCAAGGAGTATGGCGTGTTCGTCCAGTTCCCCTCAGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp GGTCCGATGTCCACTTCAAGCCACTTCTTCATCACGTaGTACTTCTTGAAGAAGCAGGTCACAGTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: GPMSTSSHFFIT*YFLKKQVTVCP
Trigger: TGGGCAGACTGTGACCTGCTTCTTCAAGAAGTACAACGTGATGAAGAAGTGGCTTGAAGTGGACATCGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp TTCTCTGGTGGGACACACTCAGAGACATGTGAATACTaGGCCAAACCCAGAACTGAAGGTCCAAGGCCTATG +
Preference number: 6 (lower is better)
Translates to: FSGGTHSETCEY*AKPRTEGPRPM
Trigger: CATAGGCCTTGGACCTTCAGTTCTGGGTTTGGCCAAGTATTCACATGTCTCTGAGTGTGTCCCACCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 90 bp TTGCTTTTCACCTCTTCAACCACACAGGTCAGGTACTGGCCGACTTaGAACTTAGCACCTTTGTTCTTCTGCCGGATGTACTCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: LLFTSSTTQVRYWPT*NLAPLFFCRMYSCA
Trigger: GGCACAAGAGTACATCCGGCAGAAGAACAAAGGTGCTAAGTTCAAAGTCGGCCAGTACCTGACCTGTGTGGTTGAAGAGGTGAAAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp GATTCATCCACATTGGTCACCTTAGCAACGACTGTCTaGCCCTCCACAAAGTGTTCACTTGGAGTGGTTACG +
Preference number: 6 (lower is better)
Translates to: DSSTLVTLATTV*PSTKCSLGVVT
Trigger: CGTAACCACTCCAAGTGAACACTTTGTGGAGGGTCAGACAGTCGTTGCTAAGGTGACCAATGTGGATGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp CTCCAGGATGGTCAGAACAAATCTGGGGTGACTTATTaGGAGAAACTTAGATGTCTTCACATCTCGCCCACC +
Preference number: 6 (lower is better)
Translates to: LQDGQNKSGVTY*EKLRCLHISPT
Trigger: GGTGGGCGAGATGTGAAGACATCTAAGTTTCTCCCAATAAGTCACCCCAGATTTGTTCTGACCATCCTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp CAGGTCAGGTACTGGCCGACTTTGAACTTAGCACCTTaGTTCTTCTGCCGGATGTACTCTTGTGCCTTCTTA +
Preference number: 6 (lower is better)
Translates to: QVRYWPTLNLAP*FFCRMYSCAFL
Trigger: TAAGAAGGCACAAGAGTACATCCGGCAGAAGAACAAAGGTGCTAAGTTCAAAGTCGGCCAGTACCTGACCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp CCCTCCACAAAGTGTTCACTTGGAGTGGTTACGAACTaGTCACTCATGATAGTTTTGGGGGACAGTCCACTG +
Preference number: 6 (lower is better)
Translates to: PSTKCSLGVVTN*SLMIVLGDSPL
Trigger: CAGTGGACTGTCCCCCAAAACTATCATGAGTGACAAGTTCGTAACCACTCCAAGTGAACACTTTGTGGAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp TTGAAGAACGTAAGGAAATTTAGCTGGAGTCCAAACTaGGTTACCTTCTGCACCTGGGCTTTGACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: LKNVRKFSWSPN*VTFCTWALTSS
Trigger: GCTGCTGGTCAAAGCCCAGGTGCAGAAGGTAACTCAGTTTGGACTCCAGCTAAATTTCCTTACGTTCTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp TTGCTTTTCACCTCTTCAACCACACAGGTCAGGTACTaGCCGACTTTGAACTTAGCACCTTTGTTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: LLFTSSTTQVRY*PTLNLAPLFFC
Trigger: GCAGAAGAACAAAGGTGCTAAGTTCAAAGTCGGCCAGTACCTGACCTGTGTGGTTGAAGAGGTGAAAAGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp TCATGTCGATGTAGACTGACCAGACGTCTGTGCGTTTaGGGTAGGTGCTCAGTGTGTTTTCAAAAATGGCTT +
Preference number: 6 (lower is better)
Translates to: SCRCRLTRRLCV*GRCSVCFQKWL
Trigger: AAGCCATTTTTGAAAACACACTGAGCACCTACCCCAAACGCACAGACGTCTGGTCAGTCTACATCGACATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp TTCTTGGGCTCCAGATGCATGAAGTCAACCAGGCCCTaGAAGAACGTAAGGAAATTTAGCTGGAGTCCAAAC +
Preference number: 6 (lower is better)
Translates to: FLGSRCMKSTRP*KNVRKFSWSPN
Trigger: GTTTGGACTCCAGCTAAATTTCCTTACGTTCTTCAAGGGCCTGGTTGACTTCATGCATCTGGAGCCCAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp TACTGGCCGACTTTGAACTTAGCACCTTTGTTCTTCTaGCGGATGTACTCTTGTGCCTTCTTAAGTGACAGA +
Preference number: 6 (lower is better)
Translates to: YWPTLNLAPLFF*RMYSCAFLSDR
Trigger: TCTGTCACTTAAGAAGGCACAAGAGTACATCCGGCAGAAGAACAAAGGTGCTAAGTTCAAAGTCGGCCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS GCA 72 bp ATGGTCCCAGTGACTTTGTCCCCAATAGCCAGGCTATaGCTTTTCTTAGACTTCACAGTCAAGTTCTCTTCT +
Preference number: 6 (lower is better)
Translates to: MVPVTLSPIARL*LFLDFTVKFSS
Trigger: AGAAGAGAACTTGACTGTGAAGTCTAAGAAAAGGCATAGCCTGGCTATTGGGGACAAAGTCACTGGGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS TCA 72 bp ACACTCAGCTCCAGGATGGTCAGAACAAATCTGGGGTaGCTTATTGGGAGAAACTTAGATGTCTTCACATCT +
Preference number: 6 (lower is better)
Translates to: TLSSRMVRTNLG*LIGRNLDVFTS
Trigger: AGATGTGAAGACATCTAAGTTTCTCCCAATAAGTCACCCCAGATTTGTTCTGACCATCCTGGAGCTGAGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp AGCAACGACTGTCTGACCCTCCACAAAGTGTTCACTTaGAGTGGTTACGAACTTGTCACTCATGATAGTTTT +
Preference number: 6 (lower is better)
Translates to: SNDCLTLHKVFT*SGYELVTHDSF
Trigger: AAAACTATCATGAGTGACAAGTTCGTAACCACTCCAAGTGAACACTTTGTGGAGGGTCAGACAGTCGTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp GATGGACGCAGAGGATGCAGGCTTTTACCGTTTGATTaGAAGAATAAGATCCCATTTTCTTGGGCTCCAGAT +
Preference number: 6 (lower is better)
Translates to: DGRRGCRLLPFD*KNKIPFSWAPD
Trigger: ATCTGGAGCCCAAGAAAATGGGATCTTATTCTTCAAATCAAACGGTAAAAGCCTGCATCCTCTGCGTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CCA 72 bp GAAACATCAAATAAGTTGTCTTGTTCAACCACCTGCTaGGAAGACTTCTCTGATTTGTGGAGTTTCCGTGTC +
Preference number: 6 (lower is better)
Translates to: ETSNKLSCSTTC*EDFSDLWSFRV
Trigger: GACACGGAAACTCCACAAATCAGAGAAGTCTTCCCAGCAGGTGGTTGAACAAGACAACTTATTTGATGTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4
CDS CAA 72 bp TTAATGGGACCTTCTTCTGTGGAAACATCAAATAAGTaGTCTTGTTCAACCACCTGCTGGGAAGACTTCTCT +
Preference number: 6 (lower is better)
Translates to: LMGPSSVETSNK*SCSTTCWEDFS
Trigger: AGAGAAGTCTTCCCAGCAGGTGGTTGAACAAGACAACTTATTTGATGTTTCCACAGAAGAAGGTCCCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000072141.4