Pregenerated sensors for PCYT2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025137Ensembl transcript IDs: ENSMUST00000026129.16, ENSMUST00000106188.4
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTGGGCAGATGTGCAGCTTCCAGTCAGGCAGGAGGGGTATCTCTaGCCAAGACTGGGGCAGTGGCAGTTGGAACCCATGGATGCCCGG | + |
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Preference number: 1 (lower is better) Translates to: QWADVQLPVRQEGYL*PRLGQWQLEPMDAR Trigger: CCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATACCCCTCCTGCCTGACTGGAAGCTGCACATCTGCCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 90 bp | CTTCCAGTCAGGCAGGAGGGGTATCTCTGGCCAAGACTGGGGCAGTaGCAGTTGGAACCCATGGATGCCCGGGATACACAGCAACACGCC | + |
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Preference number: 1 (lower is better) Translates to: LPVRQEGYLWPRLGQ*QLEPMDARDTQQHA Trigger: GGCGTGTTGCTGTGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATACCCCTCCTGCCTGACTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 90 bp | TGCCCACGGGCAGGGTGGCCCAGGAACAGAGGTCCCCAAAGCCTCTaGACCTTTCACCAAAGCTCAGTGGGCAGATGTGCAGCTTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: CPRAGWPRNRGPQSL*TFHQSSVGRCAASS Trigger: ACTGGAAGCTGCACATCTGCCCACTGAGCTTTGGTGAAAGGTCCAGAGGCTTTGGGGACCTCTGTTCCTGGGCCACCCTGCCCGTGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 90 bp | ATGTGCAGCTTCCAGTCAGGCAGGAGGGGTATCTCTGGCCAAGACTaGGGCAGTGGCAGTTGGAACCCATGGATGCCCGGGATACACAGC | + |
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Preference number: 1 (lower is better) Translates to: MCSFQSGRRGISGQD*GSGSWNPWMPGIHS Trigger: GCTGTGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATACCCCTCCTGCCTGACTGGAAGCTGCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 90 bp | GGAACAGAGGTCCCCAAAGCCTCTGGACCTTTCACCAAAGCTCAGTaGGCAGATGTGCAGCTTCCAGTCAGGCAGGAGGGGTATCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GTEVPKASGPFTKAQ*ADVQLPVRQEGYLW Trigger: CCAGAGATACCCCTCCTGCCTGACTGGAAGCTGCACATCTGCCCACTGAGCTTTGGTGAAAGGTCCAGAGGCTTTGGGGACCTCTGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CAA 90 bp | GTCAGGCAGGAGGGGTATCTCTGGCCAAGACTGGGGCAGTGGCAGTaGGAACCCATGGATGCCCGGGATACACAGCAACACGCCTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VRQEGYLWPRLGQWQ*EPMDARDTQQHASS Trigger: ACTGGAGGCGTGTTGCTGTGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATACCCCTCCTGCCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CAA 90 bp | AGGTGCCTCGCAGGCAGGCAGCACCCTCAGCAAGGCCAGTTTCCTTaGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGG | + |
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Preference number: 2 (lower is better) Translates to: RCLAGRQHPQQGQFP*ELCELTSRHRSRAG Trigger: CCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGCTGCCTGCCTGCGAGGCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| 3UTR-3UTR CCA 90 bp | AGTACAATGAGGACCAGGCAGTCTCTGCAGAGGACAGCCGTGCTGCCCAGCTGTATCTCTGGCCAAGACTaGGGCAGTGGCAGTTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: STMRTRQSLQRTAVLPSCISGQD*GSGSWN Trigger: GTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGAT...ACAGCTGGGCAGCACGGCTGTCCTCTGCAGAGACTGCCTGGTCCTCATTGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR-3UTR TCA 90 bp | GCAGTGGCAGTTGGAACCCATGGATGCCCGGGATACACAGCAACACGCCTCCAGTCCTTTGGAATTGTGTaGGCTGACATCAAGACACAG | + |
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Preference number: 2 (lower is better) Translates to: AVAVGTHGCPGYTATRLQSFGIV*ADIKTQ Trigger: CTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGA...CTGGAGGCGTGTTGCTGTGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 72 bp | AACGTGCCCCAAGGTAGAGGGTGCCCACGGGCAGGGTaGCCCAGGAACAGAGGTCCCCAAAGCCTCTGGACC | + |
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Preference number: 3 (lower is better) Translates to: NVPQGRGCPRAG*PRNRGPQSLWT Trigger: GGTCCAGAGGCTTTGGGGACCTCTGTTCCTGGGCCACCCTGCCCGTGGGCACCCTCTACCTTGGGGCACGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR-3UTR CAA 90 bp | GCAGTCTCTGCAGAGGACAGCCGTGCTGCCCAGCTGTCGGGGCAAGTGCATCTTCTGGGGCAGTGGCAGTaGGAACCCATGGATGCCCGG | + |
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Preference number: 3 (lower is better) Translates to: AVSAEDSRAAQLSGQVHLLGQWQ*EPMDAR Trigger: CCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAG...AAGATGCACTTGCCCCGACAGCTGGGCAGCACGGCTGTCCTCTGCAGAGACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 72 bp | TTCCAGTCAGGCAGGAGGGGTATCTCTGGCCAAGACTaGGGCAGTGGCAGTTGGAACCCATGGATGCCCGGG | + |
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Preference number: 3 (lower is better) Translates to: FQSGRRGISGQD*GSGSWNPWMPG Trigger: CCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATACCCCTCCTGCCTGACTGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR GCA 72 bp | GCCAAGACTGGGGCAGTGGCAGTTGGAACCCATGGATaGCCGGGATACACAGCAACACGCCTCCAGTCAGTC | + |
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Preference number: 3 (lower is better) Translates to: AKTGAVAVGTHG*PGYTATRLQSV Trigger: GACTGACTGGAGGCGTGTTGCTGTGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 72 bp | TCTGGCCAAGACTGGGGCAGTGGCAGTTGGAACCCATaGATGCCCGGGATACACAGCAACACGCCTCCAGTC | + |
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Preference number: 3 (lower is better) Translates to: SGQDWGSGSWNP*MPGIHSNTPPV Trigger: GACTGGAGGCGTGTTGCTGTGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 72 bp | AGGCAGGAGGGGTATCTCTGGCCAAGACTGGGGCAGTaGCAGTTGGAACCCATGGATGCCCGGGATACACAG | + |
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Preference number: 3 (lower is better) Translates to: RQEGYLWPRLGQ*QLEPMDARDTQ Trigger: CTGTGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATACCCCTCCTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 72 bp | GCTGTCGGGGCAAGTGCATCTTCCAGGAGTCAGGAATaGGGTGCTAGAACGTGCCCCAAGGTAGAGGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: AVGASASSRSQE*GARTCPKVEGA Trigger: GGCACCCTCTACCTTGGGGCACGTTCTAGCACCCCATTCCTGACTCCTGGAAGATGCACTTGCCCCGACAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR CCA 72 bp | GCAGGGTGGCCCAGGAACAGAGGTCCCCAAAGCCTCTaGACCTTTCACCAAAGCTCAGTGGGCAGATGTGCA | + |
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Preference number: 3 (lower is better) Translates to: AGWPRNRGPQSL*TFHQSSVGRCA Trigger: TGCACATCTGCCCACTGAGCTTTGGTGAAAGGTCCAGAGGCTTTGGGGACCTCTGTTCCTGGGCCACCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR GCA 72 bp | CCTCTGGACCTTTCACCAAAGCTCAGTGGGCAGATGTaGAGCTTCCAGTCAGGCAGGAGGGGTATCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PLDLSPKLSGQM*SFQSGRRGISG Trigger: GCCAGAGATACCCCTCCTGCCTGACTGGAAGCTGCACATCTGCCCACTGAGCTTTGGTGAAAGGTCCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR GCA 72 bp | GGGATACACAGCAACACGCCTCCAGTCAGTCACAGGTaGATCTGCTTATCCTGTCCACGGGCCACATCATTG | + |
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Preference number: 3 (lower is better) Translates to: GIHSNTPPVSHR*ICLSCPRATSL Trigger: CAATGATGTGGCCCGTGGACAGGATAAGCAGATGCACCTGTGACTGACTGGAGGCGTGTTGCTGTGTATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR TCA 72 bp | GCACCCTCAGCAAGGCCAGTTTCCTTTGGAATTGTGTaGGCTGACATCAAGACACAGAAGCAGAGCCGGGCA | + |
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Preference number: 3 (lower is better) Translates to: APSARPVSFGIV*ADIKTQKQSRA Trigger: TGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| 3UTR-3UTR CAA 90 bp | GGTCCCCAAAGCCTCTGGACCTTTCACCAAAGCTCAGTGGGCAGATGTGCAGCTCAAGGCCAGTTTCCTTaGGAATTGTGTGAGCTGACA | + |
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Preference number: 3 (lower is better) Translates to: GPQSLWTFHQSSVGRCAAQGQFP*ELCELT Trigger: TGTCAGCTCACACAATTCCAAAGGAAACTGGCCTTG...AGCTGCACATCTGCCCACTGAGCTTTGGTGAAAGGTCCAGAGGCTTTGGGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| 3UTR TCA 72 bp | CTCAGCAAGGCCAGTTTCCTTTGGAATTGTGTGAGCTaGCATCAAGACACAGAAGCAGAGCCGGGCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: LSKASFLWNCVS*HQDTEAEPGRK Trigger: CTTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS-3UTR GCA 90 bp | AGGGTGCCCACGGGCAGGGTGGCCCAGGAACAGAGGTCCCCAAAGCCTCTGGACTGGTCACCAGCAGCATaGGACCCACGAGGTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: RVPTGRVAQEQRSPKPLDWSPAA*DPRGLW Trigger: CCACAGACCTCGTGGGTCGCATGCTGCTGGTGACCA...GTCCAGAGGCTTTGGGGACCTCTGTTCCTGGGCCACCCTGCCCGTGGGCACCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR TCA 90 bp | ACAATGAGGACCAGGCAGTCTCTGCAGAGGACAGCCGTGCTGCCCAGCTGTCGGCACCAGCCACATAGATaGCCGTCTCCCCGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TMRTRQSLQRTAVLPSCRHQPHR*PSPRAG Trigger: CCCAGCCCGGGGAGACGGTCATCTATGTGGCTGGTG...CCGACAGCTGGGCAGCACGGCTGTCCTCTGCAGAGACTGCCTGGTCCTCATTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR TCA 90 bp | CTCTGGCCAAGACTGGGGCAGTGGCAGTTGGAACCCATGGATGCCCGGGATACAGGCAGGCCAGCACACTaGGAGTCCGCTCGTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LWPRLGQWQLEPMDARDTGRPAH*ESARAG Trigger: ACCTGCACGAGCGGACTCTCAGTGTGCTGGCCTGCC...TGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR GCA 90 bp | CACCAAAGTACAATGAGGACCAGGCAGTCTCTGCAGAGGACAGCCGTGCTGCCCCCCATGGCCCGTGCCTaGCGTAGCTGGTTGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: HQSTMRTRQSLQRTAVLPPMARA*RSWLEW Trigger: CCACTCCAACCAGCTACGGCAGGCACGGGCCATGGG...GGGCAGCACGGCTGTCCTCTGCAGAGACTGCCTGGTCCTCATTGTACTTTGGTG 62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR GCA 90 bp | GGCAGTCTCTGCAGAGGACAGCCGTGCTGCCCAGCTGTCGGGGCAAGTGCATCTCACCCTGGGTGCGTTTaGACTCTCTGTACCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GSLCRGQPCCPAVGASASHPGCV*TLCTSQ Trigger: CTGGGAGGTACAGAGAGTGCAAACGCACCCAGGGTG...AGATGCACTTGCCCCGACAGCTGGGCAGCACGGCTGTCCTCTGCAGAGACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR TCA 90 bp | GGCAGTCTCTGCAGAGGACAGCCGTGCTGCCCAGCTGTCGGGGCAAGTGCATCTATCTCTGTCTTCCCGTaGCACACCAGGTCCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: GSLCRGQPCCPAVGASASISVFP*HTRSTL Trigger: CAAGGTGGACCTGGTGTGTCACGGGAAGACAGAGAT...AGATGCACTTGCCCCGACAGCTGGGCAGCACGGCTGTCCTCTGCAGAGACTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR GCA 90 bp | TCGCAGGCAGGCAGCACCCTCAGCAAGGCCAGTTTCCTTTGGAATTGTGTGAGCCCCATGGCCCGTGCCTaGCGTAGCTGGTTGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SQAGSTLSKASFLWNCVSPMARA*RSWLEW Trigger: CCACTCCAACCAGCTACGGCAGGCACGGGCCATGGG...GCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGCTGCCTGCCTGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS-3UTR CCA 90 bp | CTCTGGCCAAGACTGGGGCAGTGGCAGTTGGAACCCATGGATGCCCGGGATACATTGTACCTCTCCTCCTaGGTAAACACCGGGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: LWPRLGQWQLEPMDARDTLYLSS*VNTGGP Trigger: GGGGCCCCCGGTGTTTACCCAGGAGGAGAGGTACAA...TGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR CCA 90 bp | TGGAACCCATGGATGCCCGGGATACACAGCAACACGCCTCCAGTCAGTCACAGGGACCCACGAGGTCTGTaGTGGACACACCCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: WNPWMPGIHSNTPPVSHRDPRGL*WTHPGC Trigger: GCACCCAGGGTGTGTCCACCACAGACCTCGTGGGTC...CCTGTGACTGACTGGAGGCGTGTTGCTGTGTATCCCGGGCATCCATGGGTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR CCA 90 bp | TCGCAGGCAGGCAGCACCCTCAGCAAGGCCAGTTTCCTTTGGAATTGTGTGAGCACCGTCTCCCCGGGCTaGGGCTCCTTCCCAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: SQAGSTLSKASFLWNCVSTVSPG*GSFPEA Trigger: TGCTTCTGGGAAGGAGCCCCAGCCCGGGGAGACGGT...GCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGCTGCCTGCCTGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS-3UTR CCA 90 bp | CCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAATCAGCCCAGCAGCGCTaGCAGCCCCGTGCCCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PLELCELTSRHRSRAGQESAQQR*QPRARS Trigger: GGAACGGGCACGGGGCTGCCAGCGCTGCTGGGCTGA...TTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| 3UTR CAA 72 bp | GAGGGGTATCTCTGGCCAAGACTGGGGCAGTGGCAGTaGGAACCCATGGATGCCCGGGATACACAGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: EGYLWPRLGQWQ*EPMDARDTQQH Trigger: GTGTTGCTGTGTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATACCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR TCA 90 bp | TCGCAGGCAGGCAGCACCCTCAGCAAGGCCAGTTTCCTTTGGAATTGTGTGAGCCTGGGAGGAGACTTCTaGGGAAAGTGTGTCCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: SQAGSTLSKASFLWNCVSLGGDF*GKCVPG Trigger: GCCGGGGACACACTTTCCTCAGAAGTCTCCTCCCAG...GCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGCTGCCTGCCTGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR GCA 90 bp | TCGCAGGCAGGCAGCACCCTCAGCAAGGCCAGTTTCCTTTGGAATTGTGTGAGCTGGTCACCAGCAGCATaGGACCCACGAGGTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SQAGSTLSKASFLWNCVSWSPAA*DPRGLW Trigger: CCACAGACCTCGTGGGTCGCATGCTGCTGGTGACCA...GCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGCTGCCTGCCTGCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS-3UTR GCA 90 bp | GTATCTCTGGCCAAGACTGGGGCAGTGGCAGTTGGAACCCATGGATGCCCGGGAAGGACATCTCCTGGCTaGTGTGATGGGCCTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VSLAKTGAVAVGTHGCPGRTSPG*CDGPWS Trigger: TGACCAAGGCCCATCACAGCAGCCAGGAGATGTCCT...TCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR GCA 90 bp | CCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAACCAGGCGGCGCCTCCTaGTGCTTCGTGGCCTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PLELCELTSRHRSRAGQEPGGAS*CFVASR Trigger: TCTGGAGGCCACGAAGCAGCAGGAGGCGCCGCCTGG...TTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS-3UTR CCA 90 bp | CAGTGGCAGTTGGAACCCATGGATGCCCGGGATACACAGCAACACGCCTCCAGTTGCTGTGATGGGCCTTaGTCACCAGCAGCATGCGAC | + |
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Preference number: 4 (lower is better) Translates to: QWQLEPMDARDTQQHASSCCDGP*SPAACD Trigger: GTCGCATGCTGCTGGTGACCAAGGCCCATCACAGCA...ACTGGAGGCGTGTTGCTGTGTATCCCGGGCATCCATGGGTTCCAACTGCCACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR CCA 90 bp | CAAAGCCTCTGGACCTTTCACCAAAGCTCAGTGGGCAGATGTGCAGCTTCCAGTACCGTCTCCCCGGGCTaGGGCTCCTTCCCAGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: QSLWTFHQSSVGRCAASSTVSPG*GSFPEA Trigger: TGCTTCTGGGAAGGAGCCCCAGCCCGGGGAGACGGT...ACTGGAAGCTGCACATCTGCCCACTGAGCTTTGGTGAAAGGTCCAGAGGCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR TCA 90 bp | CCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAACACCAGCCACATAGATaGCCGTCTCCCCGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PLELCELTSRHRSRAGQEHQPHR*PSPRAG Trigger: CCCAGCCCGGGGAGACGGTCATCTATGTGGCTGGTG...TTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS-3UTR TCA 90 bp | CACCAAAGTACAATGAGGACCAGGCAGTCTCTGCAGAGGACAGCCGTGCTGCCCCCCAATCACCACTTCTaGAACATACCGGCAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HQSTMRTRQSLQRTAVLPPNHHF*NIPAGQ Trigger: CTGGCCTGCCGGTATGTTTCAGAAGTGGTGATTGGG...GGGCAGCACGGCTGTCCTCTGCAGAGACTGCCTGGTCCTCATTGTACTTTGGTG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR GCA 90 bp | GAAGAGAAGAGGTGGGCACAGGGCAAGGGCGTGAACAACATCTCCGGGTCTGAAACCGGGGGCCCCTTATaGTTGGCAATCTCCTCATCC | + |
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Preference number: 4 (lower is better) Translates to: EEKRWAQGKGVNNISGSETGGPL*LAISSS Trigger: GGATGAGGAGATTGCCAAGCATAAGGGGCCCCCGGT...TTCAGACCCGGAGATGTTGTTCACGCCCTTGCCCTGTGCCCACCTCTTCTCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS-3UTR GCA 90 bp | TTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAGAGCCTGTCCAGGGGCTCTaGCCCCCAGGGCACTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LELCELTSRHRSRAGQEEPVQGL*PPGHFP Trigger: TGGAAAGTGCCCTGGGGGGCAGAGCCCCTGGACAGG...CTCTTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106188.4 |
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| CDS-3UTR CCA 90 bp | GAAGAGAAGAGGTGGGCACAGGGCAAGGGCGTGAACAACATCTCCGGGTCTGAATGCTGTGATGGGCCTTaGTCACCAGCAGCATGCGAC | + |
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Preference number: 4 (lower is better) Translates to: EEKRWAQGKGVNNISGSECCDGP*SPAACD Trigger: GTCGCATGCTGCTGGTGACCAAGGCCCATCACAGCA...TTCAGACCCGGAGATGTTGTTCACGCCCTTGCCCTGTGCCCACCTCTTCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS-3UTR TCA 90 bp | GCAGTCTCTGCAGAGGACAGCCGTGCTGCCCAGCTGTCGGGGCAAGTGCATCTTGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: AVSAEDSRAAQLSGQVHLVMSLP*TQKSQL Trigger: CAACTGTGACTTCTGTGTTCACGGCAATGACATCAC...AAGATGCACTTGCCCCGACAGCTGGGCAGCACGGCTGTCCTCTGCAGAGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
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| CDS-3UTR TCA 90 bp | GATGCCCGGGATACACAGCAACACGCCTCCAGTCAGTCACAGGTGCATCTGCTTGCTCGTGCAGGTTCATaGTGGGGTAGTTCTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DARDTQQHASSQSQVHLLARAGS*WGSSCP Trigger: AGGGCAAGAACTACCCCATCATGAACCTGCACGAGC...AAGCAGATGCACCTGTGACTGACTGGAGGCGTGTTGCTGTGTATCCCGGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
||
| CDS-3UTR TCA 90 bp | CAGTTTCCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGGGCAGGCCAGCACACTaGGAGTCCGCTCGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QFPLELCELTSRHRSRAGGRPAH*ESARAG Trigger: ACCTGCACGAGCGGACTCTCAGTGTGCTGGCCTGCC...CCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR TCA 90 bp | GAAGAGAAGAGGTGGGCACAGGGCAAGGGCGTGAACAACATCTCCGGGTCTGAACCCAATCACCACTTCTaGAACATACCGGCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEKRWAQGKGVNNISGSEPNHHF*NIPAGQ Trigger: CTGGCCTGCCGGTATGTTTCAGAAGTGGTGATTGGG...TTCAGACCCGGAGATGTTGTTCACGCCCTTGCCCTGTGCCCACCTCTTCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGCCAAGACTGGGGCAGTGGCAGTTGGAACCCATGGATGCCCGGGATACCAGAAGTCACAGTTGTaGTTGTCCAGTGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAKTGAVAVGTHGCPGYQKSQL*LSSVSR Trigger: CCTGGAGACACTGGACAAGCACAACTGTGACTTCTG...GTATCCCGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
||
| CDS-3UTR CCA 90 bp | GAAGAGAAGAGGTGGGCACAGGGCAAGGGCGTGAACAACATCTCCGGGTCTGAACCTGCCGTAGCTGGTTaGAGTGGCCATAATGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EEKRWAQGKGVNNISGSEPAVAG*SGHNAP Trigger: TGGTGCATTATGGCCACTCCAACCAGCTACGGCAGG...TTCAGACCCGGAGATGTTGTTCACGCCCTTGCCCTGTGCCCACCTCTTCTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR TCA 90 bp | GGGGTATCTCTGGCCAAGACTGGGGCAGTGGCAGTTGGAACCCATGGATGCCCGCAGAAGCAAACTGGATaGTCTTCTGGGATGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GVSLAKTGAVAVGTHGCPQKQTG*SSGMSV Trigger: TACAGACATCCCAGAAGATCATCCAGTTTGCTTCTG...CGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAAGCCTCTGGACCTTTCACCAAAGCTCAGTGGGCAGATGTGCAGCTTCCCTGCCGTAGCTGGTTaGAGTGGCCATAATGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPKPLDLSPKLSGQMCSFPAVAG*SGHNAP Trigger: TGGTGCATTATGGCCACTCCAACCAGCTACGGCAGG...GAAGCTGCACATCTGCCCACTGAGCTTTGGTGAAAGGTCCAGAGGCTTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAATTGTACCTCTCCTCCTaGGTAAACACCGGGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLELCELTSRHRSRAGQELYLSS*VNTGGP Trigger: GGGGCCCCCGGTGTTTACCCAGGAGGAGAGGTACAA...TTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CCA 90 bp | CAAAGCCTCTGGACCTTTCACCAAAGCTCAGTGGGCAGATGTGCAGCTTCCAGTGTGGTGGACACACCCTaGGTGCGTTTGCACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLWTFHQSSVGRCAASSVVDTP*VRLHSL Trigger: CAGAGAGTGCAAACGCACCCAGGGTGTGTCCACCAC...ACTGGAAGCTGCACATCTGCCCACTGAGCTTTGGTGAAAGGTCCAGAGGCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGGACCCACGAGGTCTGTaGTGGACACACCCTGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QFPLELCELTSRHRSRAGDPRGL*WTHPGC Trigger: GCACCCAGGGTGTGTCCACCACAGACCTCGTGGGTC...CCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAGAGGTGGGCACAGGGCAAGGGCGTGAACAACATCTCCGGGTCTGAACAGAAGTCACAGTTGTaGTTGTCCAGTGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEKRWAQGKGVNNISGSEQKSQL*LSSVSR Trigger: CCTGGAGACACTGGACAAGCACAACTGTGACTTCTG...TTCAGACCCGGAGATGTTGTTCACGCCCTTGCCCTGTGCCCACCTCTTCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR GCA 90 bp | TTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAGAGCACCCTGGGTGCGTTTaGACTCTCTGTACCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LELCELTSRHRSRAGQEEHPGCV*TLCTSQ Trigger: CTGGGAGGTACAGAGAGTGCAAACGCACCCAGGGTG...CTCTTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAGTGGTGGACACACCCTaGGTGCGTTTGCACTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLELCELTSRHRSRAGQEVVDTP*VRLHSL Trigger: CAGAGAGTGCAAACGCACCCAGGGTGTGTCCACCAC...TTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CCA 90 bp | CAGTTTCCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCCACGAGGTCTGTGGTaGACACACCCTGGGTGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: QFPLELCELTSRHRSRAGPRGLW*THPGCV Trigger: AACGCACCCAGGGTGTGTCCACCACAGACCTCGTGG...CCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CCA 90 bp | AAGCCTCTGGACCTTTCACCAAAGCTCAGTGGGCAGATGTGCAGCTTCCAGTCAGATGTCTGTAGAAACTaGGACACCCCTGTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPLDLSPKLSGQMCSFQSDVCRN*DTPVQG Trigger: CCCCTGGACAGGGGTGTCCCAGTTTCTACAGACATC...TGACTGGAAGCTGCACATCTGCCCACTGAGCTTTGGTGAAAGGTCCAGAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
||
| 3UTR CAA 72 bp | GCAGGCAGGCAGCACCCTCAGCAAGGCCAGTTTCCTTaGGAATTGTGTGAGCTGACATCAAGACACAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGRQHPQQGQFP*ELCELTSRHRS Trigger: GCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGCTGCCTGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR TCA 90 bp | CCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAGCTCGTGCAGGTTCATaGTGGGGTAGTTCTTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLELCELTSRHRSRAGQEARAGS*WGSSCP Trigger: AGGGCAAGAACTACCCCATCATGAACCTGCACGAGC...TTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR GCA 90 bp | TTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAGAGAGGACATCTCCTGGCTaGTGTGATGGGCCTTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LELCELTSRHRSRAGQEERTSPG*CDGPWS Trigger: TGACCAAGGCCCATCACAGCAGCCAGGAGATGTCCT...CTCTTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CCA 90 bp | TTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAGAGGATGTCTGTAGAAACTaGGACACCCCTGTCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LELCELTSRHRSRAGQEEDVCRN*DTPVQG Trigger: CCCCTGGACAGGGGTGTCCCAGTTTCTACAGACATC...CTCTTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| 3UTR CAA 72 bp | AGGCAGCACCCTCAGCAAGGCCAGTTTCCTTTGGAATaGTGTGAGCTGACATCAAGACACAGAAGCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RQHPQQGQFPLE*CELTSRHRSRA Trigger: GGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR TCA 90 bp | CAGTTTCCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGATCTCTGTCTTCCCGTaGCACACCAGGTCCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QFPLELCELTSRHRSRAGISVFP*HTRSTL Trigger: CAAGGTGGACCTGGTGTGTCACGGGAAGACAGAGAT...CCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR TCA 90 bp | TTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAGAGGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LELCELTSRHRSRAGQEEVMSLP*TQKSQL Trigger: CAACTGTGACTTCTGTGTTCACGGCAATGACATCAC...CTCTTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR TCA 90 bp | TTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAGAGCAGAAGCAAACTGGATaGTCTTCTGGGATGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LELCELTSRHRSRAGQEEQKQTG*SSGMSV Trigger: TACAGACATCCCAGAAGATCATCCAGTTTGCTTCTG...CTCTTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS GCA 90 bp | CATAATGCACCATGTCATAGCAGCCATCGCACCACACCCGCACGATaGGCTGATCTCCCGGACCCTTCAGCCCAGCAGCGCTGGCAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HNAPCHSSHRTTPAR*ADLPDPSAQQRWQP Trigger: GGGCTGCCAGCGCTGCTGGGCTGAAGGGTCCGGGAGATCAGCGCATCGTGCGGGTGTGGTGCGATGGCTGCTATGACATGGTGCATTATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS CCA 90 bp | GATGGGCCTTGGTCACCAGCAGCATGCGACCCACGAGGTCTGTGGTaGACACACCCTGGGTGCGTTTGCACTCTCTGTACCTCCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DGPWSPAACDPRGLW*THPGCVCTLCTSQP Trigger: AGGCTGGGAGGTACAGAGAGTGCAAACGCACCCAGGGTGTGTCCACCACAGACCTCGTGGGTCGCATGCTGCTGGTGACCAAGGCCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS TCA 90 bp | CCACGTGCCCGATGTGGAACAGGTCAAAGGCACCAGCCACATAGATaGCCGTCTCCCCGGGCTGGGGCTCCTTCCCAGAAGCAAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRARCGTGQRHQPHR*PSPRAGAPSQKQTG Trigger: TCCAGTTTGCTTCTGGGAAGGAGCCCCAGCCCGGGGAGACGGTCATCTATGTGGCTGGTGCCTTTGACCTGTTCCACATCGGGCACGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS CCA 90 bp | TGTGATGGGCCTTGGTCACCAGCAGCATGCGACCCACGAGGTCTGTaGTGGACACACCCTGGGTGCGTTTGCACTCTCTGTACCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CDGPWSPAACDPRGL*WTHPGCVCTLCTSQ Trigger: CTGGGAGGTACAGAGAGTGCAAACGCACCCAGGGTGTGTCCACCACAGACCTCGTGGGTCGCATGCTGCTGGTGACCAAGGCCCATCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CAA 90 bp | ACAATGAGGACCAGGCAGTCTCTGCAGAGGACAGCCGTGCTGCCCAGCTGTCGGGGGGGCCCCTTATGCTaGGCAATCTCCTCATCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: TMRTRQSLQRTAVLPSCRGGPLC*AISSSV Trigger: TACGGATGAGGAGATTGCCAAGCATAAGGGGCCCCC...CCGACAGCTGGGCAGCACGGCTGTCCTCTGCAGAGACTGCCTGGTCCTCATTGT 61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
||
| CDS TCA 90 bp | GCCCCTTATGCTTGGCAATCTCCTCATCCGTATGCACACCCACGATaGGGTAGTCCCCCATGGCCCGTGCCTGCCGTAGCTGGTTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: APYAWQSPHPYAHPR*GSPPWPVPAVAGWS Trigger: ACTCCAACCAGCTACGGCAGGCACGGGCCATGGGGGACTACCTCATCGTGGGTGTGCATACGGATGAGGAGATTGCCAAGCATAAGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CAA 90 bp | GGGGTATCTCTGGCCAAGACTGGGGCAGTGGCAGTTGGAACCCATGGATGCCCGATGGCCTGTACCATCTaGTACCTCTCCTCCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GVSLAKTGAVAVGTHGCPMACTI*YLSSWV Trigger: TACCCAGGAGGAGAGGTACAAGATGGTACAGGCCAT...CGGGCATCCATGGGTTCCAACTGCCACTGCCCCAGTCTTGGCCAGAGATACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026129.16 |
||
| CDS-3UTR CAA 90 bp | TCGCAGGCAGGCAGCACCCTCAGCAAGGCCAGTTTCCTTTGGAATTGTGTGAGCGGGGGCCCCTTATGCTaGGCAATCTCCTCATCCGTA | + |
|
Preference number: 5 (lower is better) Translates to: SQAGSTLSKASFLWNCVSGGPLC*AISSSV Trigger: TACGGATGAGGAGATTGCCAAGCATAAGGGGCCCCC...GCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGCTGCCTGCCTGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS TCA 90 bp | TGCCCTTGTACCGGTTTACTTCCTGGTCAAAGTGTAGGCCGGCGATaGCGTAGGGCCTCTTGGCTAGCTTGTGCACCTCCTGTAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CPCTGLLPGQSVGRR*RRASWLACAPPVGS Trigger: ACTTCCTACAGGAGGTGCACAAGCTAGCCAAGAGGCCCTACGTCATCGCCGGCCTACACTTTGACCAGGAAGTAAACCGGTACAAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS TCA 90 bp | TGTCGGGTACAATCTCTGTCTTCCCGTGACACACCAGGTCCACCTTaGAGTGATTCAGGAGCTCCGCTGTCACGGAGTATGGTGCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: CRVQSLSSRDTPGPP*SDSGAPLSRSMVPQ Trigger: TTGGGGCACCATACTCCGTGACAGCGGAGCTCCTGAATCACTTCAAGGTGGACCTGGTGTGTCACGGGAAGACAGAGATTGTACCCGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS CCA 90 bp | TCATCCACCCACTTGATGGCCTGTACCATCTTGTACCTCTCCTCCTaGGTAAACACCGGGGGCCCCTTATGCTTGGCAATCTCCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SSTHLMACTILYLSS*VNTGGPLCLAISSS Trigger: GGATGAGGAGATTGCCAAGCATAAGGGGCCCCCGGTGTTTACCCAGGAGGAGAGGTACAAGATGGTACAGGCCATCAAGTGGGTGGATGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CAA 90 bp | TCGCAGGCAGGCAGCACCCTCAGCAAGGCCAGTTTCCTTTGGAATTGTGTGAGCACACAGAAGTCACAGTaGTGCTTGTCCAGTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQAGSTLSKASFLWNCVSTQKSQ*CLSSVS Trigger: GGAGACACTGGACAAGCACAACTGTGACTTCTGTGT...GCTCACACAATTCCAAAGGAAACTGGCCTTGCTGAGGGTGCTGCCTGCCTGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CAA 90 bp | TTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAGAGAAGTCACAGTTGTGCTaGTCCAGTGTCTCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LELCELTSRHRSRAGQEEKSQLC*SSVSRV Trigger: CACCCTGGAGACACTGGACAAGCACAACTGTGACTT...CTCTTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CAA 90 bp | CAGTTTCCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGATGGCCTGTACCATCTaGTACCTCTCCTCCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QFPLELCELTSRHRSRAGMACTI*YLSSWV Trigger: TACCCAGGAGGAGAGGTACAAGATGGTACAGGCCAT...CCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGGAAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGAATTGTGTGAGCTGACATCAAGACACAGAAGCAGAGCCGGGCAGGAAACACAGAAGTCACAGTaGTGCTTGTCCAGTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLELCELTSRHRSRAGQETQKSQ*CLSSVS Trigger: GGAGACACTGGACAAGCACAACTGTGACTTCTGTGT...TTCCTGCCCGGCTCTGCTTCTGTGTCTTGATGTCAGCTCACACAATTCCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS TCA 90 bp | TGCTTCGTGGCCTCCAGAAAGGCTAATTCCTTGGCTTCTTTCTTCTaGTTCCGTGCTTCATACTCCAGCCTGTTCTTGATGATCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CFVASRKANSLASFF*FRASYSSLFLMILC Trigger: GCAGAGGATCATCAAGAACAGGCTGGAGTATGAAGCACGGAATCAGAAGAAAGAAGCCAAGGAATTAGCCTTTCTGGAGGCCACGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS GCA 72 bp | CCATGTCATAGCAGCCATCGCACCACACCCGCACGATaGGCTGATCTCCCGGACCCTTCAGCCCAGCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: PCHSSHRTTPAR*ADLPDPSAQQR Trigger: GCGCTGCTGGGCTGAAGGGTCCGGGAGATCAGCGCATCGTGCGGGTGTGGTGCGATGGCTGCTATGACATGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS CCA 72 bp | AGCATGCGACCCACGAGGTCTGTGGTGGACACACCCTaGGTGCGTTTGCACTCTCTGTACCTCCCAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SMRPTRSVVDTP*VRLHSLYLPAC Trigger: GCAGGCTGGGAGGTACAGAGAGTGCAAACGCACCCAGGGTGTGTCCACCACAGACCTCGTGGGTCGCATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS TCA 72 bp | GCTTGGCAATCTCCTCATCCGTATGCACACCCACGATaGGGTAGTCCCCCATGGCCCGTGCCTGCCGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AWQSPHPYAHPR*GSPPWPVPAVA Trigger: AGCTACGGCAGGCACGGGCCATGGGGGACTACCTCATCGTGGGTGTGCATACGGATGAGGAGATTGCCAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS TCA 72 bp | CGTAGGGAGCAGCGGGCACCACCTCATCCACCCACTTaGTGGCCTGTACCATCTTGTACCTCTCCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RREQRAPPHPPT*WPVPSCTSPPG Trigger: CCCAGGAGGAGAGGTACAAGATGGTACAGGCCATCAAGTGGGTGGATGAGGTGGTGCCCGCTGCTCCCTACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS CCA 72 bp | TGGTCACCAGCAGCATGCGACCCACGAGGTCTGTGGTaGACACACCCTGGGTGCGTTTGCACTCTCTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: WSPAACDPRGLW*THPGCVCTLCT Trigger: GGTACAGAGAGTGCAAACGCACCCAGGGTGTGTCCACCACAGACCTCGTGGGTCGCATGCTGCTGGTGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
||
| CDS CAA 90 bp | GCAGCGGGCACCACCTCATCCACCCACTTGATGGCCTGTACCATCTaGTACCTCTCCTCCTGGGTAAACACCGGGGGCCCCTTATGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: AAGTTSSTHLMACTI*YLSSWVNTGGPLCL Trigger: CAAGCATAAGGGGCCCCCGGTGTTTACCCAGGAGGAGAGGTACAAGATGGTACAGGCCATCAAGTGGGTGGATGAGGTGGTGCCCGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS CCA 72 bp | GGTAGTCCCCCATGGCCCGTGCCTGCCGTAGCTGGTTaGAGTGGCCATAATGCACCATGTCATAGCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: GSPPWPVPAVAG*SGHNAPCHSSH Trigger: ATGGCTGCTATGACATGGTGCATTATGGCCACTCCAACCAGCTACGGCAGGCACGGGCCATGGGGGACTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS CAA 72 bp | ACCACCTCATCCACCCACTTGATGGCCTGTACCATCTaGTACCTCTCCTCCTGGGTAAACACCGGGGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: TTSSTHLMACTI*YLSSWVNTGGP Trigger: GGGGCCCCCGGTGTTTACCCAGGAGGAGAGGTACAAGATGGTACAGGCCATCAAGTGGGTGGATGAGGTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS TCA 72 bp | CCCCGGGCTGGGGCTCCTTCCCAGAAGCAAACTGGATaGTCTTCTGGGATGTCTGTAGAAACTGGGACACCC | + |
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Preference number: 6 (lower is better) Translates to: PRAGAPSQKQTG*SSGMSVETGTP Trigger: GGGTGTCCCAGTTTCTACAGACATCCCAGAAGATCATCCAGTTTGCTTCTGGGAAGGAGCCCCAGCCCGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS GCA 72 bp | TACCTCTCCTCCTGGGTAAACACCGGGGGCCCCTTATaGTTGGCAATCTCCTCATCCGTATGCACACCCACG | + |
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Preference number: 6 (lower is better) Translates to: YLSSWVNTGGPL*LAISSSVCTPT Trigger: CGTGGGTGTGCATACGGATGAGGAGATTGCCAAGCATAAGGGGCCCCCGGTGTTTACCCAGGAGGAGAGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS CAA 72 bp | CTCTCCTCCTGGGTAAACACCGGGGGCCCCTTATGCTaGGCAATCTCCTCATCCGTATGCACACCCACGATG | + |
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Preference number: 6 (lower is better) Translates to: LSSWVNTGGPLC*AISSSVCTPTM Trigger: CATCGTGGGTGTGCATACGGATGAGGAGATTGCCAAGCATAAGGGGCCCCCGGTGTTTACCCAGGAGGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS TCA 72 bp | ACCGGTTTACTTCCTGGTCAAAGTGTAGGCCGGCGATaGCGTAGGGCCTCTTGGCTAGCTTGTGCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TGLLPGQSVGRR*RRASWLACAPP Trigger: AGGAGGTGCACAAGCTAGCCAAGAGGCCCTACGTCATCGCCGGCCTACACTTTGACCAGGAAGTAAACCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS CCA 72 bp | CACTTGATGGCCTGTACCATCTTGTACCTCTCCTCCTaGGTAAACACCGGGGGCCCCTTATGCTTGGCAATC | + |
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Preference number: 6 (lower is better) Translates to: HLMACTILYLSS*VNTGGPLCLAI Trigger: GATTGCCAAGCATAAGGGGCCCCCGGTGTTTACCCAGGAGGAGAGGTACAAGATGGTACAGGCCATCAAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS TCA 72 bp | CAATCTCTGTCTTCCCGTGACACACCAGGTCCACCTTaGAGTGATTCAGGAGCTCCGCTGTCACGGAGTATG | + |
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Preference number: 6 (lower is better) Translates to: QSLSSRDTPGPP*SDSGAPLSRSM Trigger: CATACTCCGTGACAGCGGAGCTCCTGAATCACTTCAAGGTGGACCTGGTGTGTCACGGGAAGACAGAGATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS CCA 72 bp | TGGGGCTCCTTCCCAGAAGCAAACTGGATGATCTTCTaGGATGTCTGTAGAAACTGGGACACCCCTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: WGSFPEANWMIF*DVCRNWDTPVQ Trigger: CTGGACAGGGGTGTCCCAGTTTCTACAGACATCCCAGAAGATCATCCAGTTTGCTTCTGGGAAGGAGCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS TCA 72 bp | TCTCGGCCGTCTACTGTCAGCGTGATGTCATTGCCGTaGACACAGAAGTCACAGTTGTGCTTGTCCAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRPSTVSVMSLP*TQKSQLCLSSV Trigger: GACACTGGACAAGCACAACTGTGACTTCTGTGTTCACGGCAATGACATCACGCTGACAGTAGACGGCCGAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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| CDS CCA 72 bp | CCTGCTGCTTCGTGGCCTCCAGAAAGGCTAATTCCTTaGCTTCTTTCTTCTGATTCCGTGCTTCATACTCCA | + |
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Preference number: 6 (lower is better) Translates to: PAASWPPERLIP*LLSSDSVLHTP Trigger: TGGAGTATGAAGCACGGAATCAGAAGAAAGAAGCCAAGGAATTAGCCTTTCTGGAGGCCACGAAGCAGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026129.16 ENSMUST00000106188.4 |
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