Pregenerated sensors for PCYT1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035246Ensembl transcript IDs: ENSMUST00000045898.4, ENSMUST00000113933.9
Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTaGATTCCATCCAGCCTTAGTGGCTGTACTGGGAAGGCTGAACTT | + |
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Preference number: 1 (lower is better) Translates to: AKLRLRQGPEMGKGW*IPSSLSGCTGKAEL Trigger: AAGTTCAGCCTTCCCAGTACAGCCACTAAGGCTGGATGGAATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | AACGCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTaGTGCATTCCATCCAGCCTTAGTGGCTGTACTGGGAAGGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: NAKLRLRQGPEMGKG*CIPSSLSGCTGKAE Trigger: TTCAGCCTTCCCAGTACAGCCACTAAGGCTGGATGGAATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | GGGAACCAGGCGGTTCTTGAGATCAAGCATTTCAGCAGGGTGTCATaGGGGAGAGCAGGAGAGGGATCTAGAGTCCAACACCACCACCAT | + |
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Preference number: 1 (lower is better) Translates to: GNQAVLEIKHFSRVS*GRAGEGSRVQHHHH Trigger: ATGGTGGTGGTGTTGGACTCTAGATCCCTCTCCTGCTCTCCCCCATGACACCCTGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | TTTGTCCTGGGTACATGGTGGGAGGCTGAGGTCAAACCGATACCGTaGAGGAATGGAAGCCCTTGCCTCTGGGGTGTGATTCTCCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: FVLGTWWEAEVKPIP*RNGSPCLWGVILQE Trigger: CTCTTGGAGAATCACACCCCAGAGGCAAGGGCTTCCATTCCTCCACGGTATCGGTTTGACCTCAGCCTCCCACCATGTACCCAGGACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | GTCAAGAAGGGCCAAAGGTTGGCTAGCAGAATCCGCCCCATTTCTTaGTGGCAAGCTCGTGGCTTTGGGAAGGTGAGGAGATGCTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: VKKGQRLASRIRPIS*WQARGFGKVRRCCC Trigger: GCAACAGCATCTCCTCACCTTCCCAAAGCCACGAGCTTGCCACCAAGAAATGGGGCGGATTCTGCTAGCCAACCTTTGGCCCTTCTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | TCCAGCCTTAGTGGCTGTACTGGGAAGGCTGAACTTTGCCCATTGTaGGAAGGGAATTCATTCTGGGAGAGCATGGGTGACAGGGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: SSLSGCTGKAELCPL*EGNSFWESMGDRGQ Trigger: TTGCCCCCTGTCACCCATGCTCTCCCAGAATGAATTCCCTTCCCACAATGGGCAAAGTTCAGCCTTCCCAGTACAGCCACTAAGGCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | AAGAAGGGCCAAAGGTTGGCTAGCAGAATCCGCCCCATTTCTTGGTaGCAAGCTCGTGGCTTTGGGAAGGTGAGGAGATGCTGTTGCAAA | + |
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Preference number: 1 (lower is better) Translates to: KKGQRLASRIRPISW*QARGFGKVRRCCCK Trigger: TTTGCAACAGCATCTCCTCACCTTCCCAAAGCCACGAGCTTGCCACCAAGAAATGGGGCGGATTCTGCTAGCCAACCTTTGGCCCTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR GCA 90 bp | TGCATTCCATCCAGCCTTAGTGGCTGTACTGGGAAGGCTGAACTTTaGCCATTGTGGGAAGGGAATTCATTCTGGGAGAGCATGGGTGAC | + |
|
Preference number: 1 (lower is better) Translates to: CIPSSLSGCTGKAEL*PLWEGNSFWESMGD Trigger: GTCACCCATGCTCTCCCAGAATGAATTCCCTTCCCACAATGGGCAAAGTTCAGCCTTCCCAGTACAGCCACTAAGGCTGGATGGAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | CAGCAGCCACATCTGCGGGTGGCTTATTGGCTACAGATAGATGTGTaGACCAAAGCAGAACTCATCCCACTTCATGGAGTGTTCTGCACC | + |
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Preference number: 1 (lower is better) Translates to: QQPHLRVAYWLQIDV*TKAELIPLHGVFCT Trigger: GGTGCAGAACACTCCATGAAGTGGGATGAGTTCTGCTTTGGTCCACACATCTATCTGTAGCCAATAAGCCACCCGCAGATGTGGCTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | CTGGCTGAAATAGAAGGCATACACGCACAATTTGTCCTGGGTACATaGTGGGAGGCTGAGGTCAAACCGATACCGTGGAGGAATGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: LAEIEGIHAQFVLGT*WEAEVKPIPWRNGS Trigger: GCTTCCATTCCTCCACGGTATCGGTTTGACCTCAGCCTCCCACCATGTACCCAGGACAAATTGTGCGTGTATGCCTTCTATTTCAGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | TCAGTTGCTCTCCTTGTCCCTGCACTGCCACAAGTGTCAGCTGGCTaGAATAGAAGGCATACACGCACAATTTGTCCTGGGTACATGGTG | + |
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Preference number: 1 (lower is better) Translates to: SVALLVPALPQVSAG*NRRHTRTICPGYMV Trigger: CACCATGTACCCAGGACAAATTGTGCGTGTATGCCTTCTATTTCAGCCAGCTGACACTTGTGGCAGTGCAGGGACAAGGAGAGCAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | TTACATGGAGAGTCAGCACTTGGTTTCCAGGGGTGGGGAGAGATATaGGAATTGCTAATATGCCAAAGAAGCTGGAGAGGCCAGGACCCC | + |
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Preference number: 1 (lower is better) Translates to: LHGESALGFQGWGEI*ELLICQRSWRGQDP Trigger: GGGGTCCTGGCCTCTCCAGCTTCTTTGGCATATTAGCAATTCTCATATCTCTCCCCACCCCTGGAAACCAAGTGCTGACTCTCCATGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR GCA 90 bp | TTCCTCTCTCTAGGACCCTCTTCTCCTCTTCTTCATTTGCTCAGTTaGTCTCCTTGTCCCTGCACTGCCACAAGTGTCAGCTGGCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: FLSLGPSSPLLHLLS*SPCPCTATSVSWLK Trigger: TTTCAGCCAGCTGACACTTGTGGCAGTGCAGGGACAAGGAGAGCAACTGAGCAAATGAAGAAGAGGAGAAGAGGGTCCTAGAGAGAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | CCCAAAGCCTCTGAAGGCAGGGGGTGTTTCTGTCACTGGAGGTGTTaGACTTTGCCCACCAGTTACATGTTAAGGCCTTCACTTAGTCAA | + |
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Preference number: 1 (lower is better) Translates to: PKASEGRGCFCHWRC*TLPTSYMLRPSLSQ Trigger: TTGACTAAGTGAAGGCCTTAACATGTAACTGGTGGGCAAAGTCCAACACCTCCAGTGACAGAAACACCCCCTGCCTTCAGAGGCTTTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | ATGCATGTTCCCAAAGCCTCTGAAGGCAGGGGGTGTTTCTGTCACTaGAGGTGTTGGACTTTGCCCACCAGTTACATGTTAAGGCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: MHVPKASEGRGCFCH*RCWTLPTSYMLRPS Trigger: TGAAGGCCTTAACATGTAACTGGTGGGCAAAGTCCAACACCTCCAGTGACAGAAACACCCCCTGCCTTCAGAGGCTTTGGGAACATGCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | GCTGAGGTCAAACCGATACCGTGGAGGAATGGAAGCCCTTGCCTCTaGGGTGTGATTCTCCAAGAGGGCCTTGACTATGAAAAGAAGTTT | + |
|
Preference number: 1 (lower is better) Translates to: AEVKPIPWRNGSPCL*GVILQEGLDYEKKF Trigger: AAACTTCTTTTCATAGTCAAGGCCCTCTTGGAGAATCACACCCCAGAGGCAAGGGCTTCCATTCCTCCACGGTATCGGTTTGACCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | GGGATGATTCTGATGTTGGTCACTTCCCATCATTCACAGCTACAGTaGCACTCTCTGATGAGTCACGTATGTGGCACCTGGCAGGATGGT | + |
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Preference number: 1 (lower is better) Translates to: GMILMLVTSHHSQLQ*HSLMSHVCGTWQDG Trigger: ACCATCCTGCCAGGTGCCACATACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | GGCAGGCCTTGGGTGGAGTTCACCTTGACACAACTGTCCTTTGAGTaGGAGATTAAGGGTCACACTTTTCTATCTGACCAACGCGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: GRPWVEFTLTQLSFE*EIKGHTFLSDQREA Trigger: AGCTTCGCGTTGGTCAGATAGAAAAGTGTGACCCTTAATCTCTCACTCAAAGGACAGTTGTGTCAAGGTGAACTCCACCCAAGGCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR GCA 90 bp | GGGTCTAGGGGTTTCAGTGGTAGGGTTGGGGTGGTTCCAGTAGTTTaGACTATTCAGCACCAGAGCAAATGCTTGGGCATAAGATCATTC | + |
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Preference number: 1 (lower is better) Translates to: GSRGFSGRVGVVPVV*TIQHQSKCLGIRSF Trigger: GAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAATAGTGCAAACTACTGGAACCACCCCAACCCTACCACTGAAACCCCTAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | ACAGTGGCACTCTCTGATGAGTCACGTATGTGGCACCTGGCAGGATaGTGTGTAGGGCCTGCAAAATTATACTCACCTGATATGTCACCT | + |
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Preference number: 1 (lower is better) Translates to: TVALSDESRMWHLAG*CVGPAKLYSPDMSP Trigger: AGGTGACATATCAGGTGAGTATAATTTTGCAGGCCCTACACACCATCCTGCCAGGTGCCACATACGTGACTCATCAGAGAGTGCCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | CCATCATTCACAGCTACAGTGGCACTCTCTGATGAGTCACGTATGTaGCACCTGGCAGGATGGTGTGTAGGGCCTGCAAAATTATACTCA | + |
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Preference number: 1 (lower is better) Translates to: PSFTATVALSDESRM*HLAGWCVGPAKLYS Trigger: TGAGTATAATTTTGCAGGCCCTACACACCATCCTGCCAGGTGCCACATACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | TTAGCAACAGTCACCACTGATCTTCAGGTGAGCAGGGAGGTAGTTTaGCCCCAACACAAAGGGGAAAGACAGGGTACCTTTCTTCATGAG | + |
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Preference number: 1 (lower is better) Translates to: LATVTTDLQVSREVV*PQHKGERQGTFLHE Trigger: CTCATGAAGAAAGGTACCCTGTCTTTCCCCTTTGTGTTGGGGTCAAACTACCTCCCTGCTCACCTGAAGATCAGTGGTGACTGTTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | TCAAACCGATACCGTGGAGGAATGGAAGCCCTTGCCTCTGGGGTGTaGTTCTCCAAGAGGGCCTTGACTATGAAAAGAAGTTTCTTTCTC | + |
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Preference number: 1 (lower is better) Translates to: SNRYRGGMEALASGV*FSKRALTMKRSFFL Trigger: GAGAAAGAAACTTCTTTTCATAGTCAAGGCCCTCTTGGAGAATCACACCCCAGAGGCAAGGGCTTCCATTCCTCCACGGTATCGGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | GCACCTGGCAGGATGGTGTGTAGGGCCTGCAAAATTATACTCACCTaGTATGTCACCTCTACATTCTCTGCCTCAGAGCAAGACTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: APGRMVCRACKIILT*YVTSTFSASEQDLG Trigger: ACCTAAGTCTTGCTCTGAGGCAGAGAATGTAGAGGTGACATATCAGGTGAGTATAATTTTGCAGGCCCTACACACCATCCTGCCAGGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR GCA 90 bp | TTCTCCTCTTCTTCATTTGCTCAGTTGCTCTCCTTGTCCCTGCACTaGCACAAGTGTCAGCTGGCTGAAATAGAAGGCATACACGCACAA | + |
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Preference number: 1 (lower is better) Translates to: FSSSSFAQLLSLSLH*HKCQLAEIEGIHAQ Trigger: TTGTGCGTGTATGCCTTCTATTTCAGCCAGCTGACACTTGTGGCAGTGCAGGGACAAGGAGAGCAACTGAGCAAATGAAGAAGAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR GCA 90 bp | GTTGGGGTGGTTCCAGTAGTTTGCACTATTCAGCACCAGAGCAAATaGTTGGGCATAAGATCATTCTTGAATCCAGACAAGCCCTCGGCT | + |
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Preference number: 1 (lower is better) Translates to: VGVVPVVCTIQHQSK*LGIRSFLNPDKPSA Trigger: AGCCGAGGGCTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAATAGTGCAAACTACTGGAACCACCCCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | AAATGTACAGCCAGAAGCATGGCAGGCCTTGGGTGGAGTTCACCTTaGCACAACTGTCCTTTGAGTGAGAGATTAAGGGTCACACTTTTC | + |
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Preference number: 1 (lower is better) Translates to: KCTARSMAGLGWSSP*HNCPLSERLRVTLF Trigger: GAAAAGTGTGACCCTTAATCTCTCACTCAAAGGACAGTTGTGTCAAGGTGAACTCCACCCAAGGCCTGCCATGCTTCTGGCTGTACATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR GCA 90 bp | GCTTCTATCCCTTTTCTTACTTCTCCAAGCCTGCAGCACGTGTTATaGTGTCATTCGATCCTTAACTCGCCCTTGACCATGAGAATTGCC | + |
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Preference number: 1 (lower is better) Translates to: ASIPFLTSPSLQHVL*CHSILNSPLTMRIA Trigger: GGCAATTCTCATGGTCAAGGGCGAGTTAAGGATCGAATGACAGCATAACACGTGCTGCAGGCTTGGAGAAGTAAGAAAAGGGATAGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | CACCACCACCATAGATTCATATTGCATATGGGATACACCCTGGGGTaGCATATTGGAGGATACATAGAACAGATACGTGCAGGTAGCACC | + |
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Preference number: 1 (lower is better) Translates to: HHHHRFILHMGYTLG*HIGGYIEQIRAGST Trigger: GGTGCTACCTGCACGTATCTGTTCTATGTATCCTCCAATATGCCACCCCAGGGTGTATCCCATATGCAATATGAATCTATGGTGGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR GCA 90 bp | CTTCCTCATCAGATGGTTAGGACAAGACTGGAGTTGCTGAGTAGATaGCTGAAAACCAGTCTCATCTGTGGAGTAGGACTGGGCATTTTA | + |
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Preference number: 1 (lower is better) Translates to: LPHQMVRTRLELLSR*LKTSLICGVGLGIL Trigger: TAAAATGCCCAGTCCTACTCCACAGATGAGACTGGTTTTCAGGCATCTACTCAGCAACTCCAGTCTTGTCCTAACCATCTGATGAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | TCCAAGAGGGCCTTGACTATGAAAAGAAGTTTCTTTCTCGCAGGCTaGATTCCCAGCGATCCCCCATCTTTCATGAGCACTTTACAAACT | + |
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Preference number: 1 (lower is better) Translates to: SKRALTMKRSFFLAG*IPSDPPSFMSTLQT Trigger: AGTTTGTAAAGTGCTCATGAAAGATGGGGGATCGCTGGGAATCCAGCCTGCGAGAAAGAAACTTCTTTTCATAGTCAAGGCCCTCTTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | CACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTGACAATTTGTaGCAGACATGGGCCATACACCATATTACAACTACACCCCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: HKPGLSLSLGYPDNL*QTWAIHHITTTPLL Trigger: CAACAGGGGTGTAGTTGTAATATGGTGTATGGCCCATGTCTGCCACAAATTGTCAGGATAACCCAGAGACAAAGATAAACCAGGCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | ATCAATTCAGGTAATTTCTGGAAAACAGTCTCCTCATGCCAAAGATaGAAATGTACAGCCAGAAGCATGGCAGGCCTTGGGTGGAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: INSGNFWKTVSSCQR*KCTARSMAGLGWSS Trigger: TGAACTCCACCCAAGGCCTGCCATGCTTCTGGCTGTACATTTTCATCTTTGGCATGAGGAGACTGTTTTCCAGAAATTACCTGAATTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | CTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTaGCAATTTGTGGCAGACATGGGCCATACACCATATTACAACTAC | + |
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Preference number: 1 (lower is better) Translates to: LCLSQAWFIFVSGLS*QFVADMGHTPYYNY Trigger: GTAGTTGTAATATGGTGTATGGCCCATGTCTGCCACAAATTGTCAGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CCA 90 bp | AAAAAGGCTTCCTCAACAGAGAGTCTCCGCACATACAACCAGAAGTaGCTTAAGAGCGTAGATGGTTTTAGCTTTCTTTCTTTCCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: KKASSTESLRTYNQK*LKSVDGFSFLSFLS Trigger: AGAGAGGAAAGAAAGAAAGCTAAAACCATCTACGCTCTTAAGCCACTTCTGGTTGTATGTGCGGAGACTCTCTGTTGAGGAAGCCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR TCA 90 bp | TTATTCGAGTCTATGAACTGTGATGTGGTCAGAAATGGAAAGAGCTaGTCCTTTAAGAAGCTCCAAGAGATATTTTTCATCTTCCATACA | + |
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Preference number: 1 (lower is better) Translates to: LFESMNCDVVRNGKS*SFKKLQEIFFIFHT Trigger: TGTATGGAAGATGAAAAATATCTCTTGGAGCTTCTTAAAGGATCAGCTCTTTCCATTTCTGACCACATCACAGTTCATAGACTCGAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CAA 90 bp | CATTCTGGGAGAGCATGGGTGACAGGGGGCAACGTGCAAGGCTCTTaGAGGACTGGAGAGGGCAGGGCGAGGCAGCAGCCACATCTGCGG | + |
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Preference number: 2 (lower is better) Translates to: HSGRAWVTGGNVQGS*RTGEGRARQQPHLR Trigger: CCGCAGATGTGGCTGCTGCCTCGCCCTGCCCTCTCCAGTCCTCAAAGAGCCTTGCACGTTGCCCCCTGTCACCCATGCTCTCCCAGAATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR-3UTR TCA 90 bp | CATTGGGGATCAGGAGACTGGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGGACGCGAAGCTGCGTCTaGGGCAGGGTCCTGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: HWGSGDWIGSRGFSGRVGTRSCV*GRVLKW Trigger: CCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGT...CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CAA 90 bp | CCATCCAGCCTTAGTGGCTGTACTGGGAAGGCTGAACTTTGCCCATaGTGGGAAGGGAATTCATTCTGGGAGAGCATGGGTGACAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PSSLSGCTGKAELCP*WEGNSFWESMGDRG Trigger: CCCCCTGTCACCCATGCTCTCCCAGAATGAATTCCCTTCCCACAATGGGCAAAGTTCAGCCTTCCCAGTACAGCCACTAAGGCTGGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR-3UTR TCA 90 bp | CATTGGGGATCAGGAGACTGGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGGCAGAAACCTCCATGCTaGGCCCAGGCCAGACTGAAT | + |
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Preference number: 2 (lower is better) Translates to: HWGSGDWIGSRGFSGRVGQKPPC*AQARLN Trigger: ATTCAGTCTGGCCTGGGCTCAGCATGGAGGTTTCTG...CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTTGTTTACATGGAGAGTCAGCACTTGGTTTCCAGGGGTGGGGAGAGATATGACGCGAAGCTGCGTCTaGGGCAGGGTCCTGAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LLFTWRVSTWFPGVGRDMTRSCV*GRVLKW Trigger: CCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGT...CATATCTCTCCCCACCCCTGGAAACCAAGTGCTGACTCTCCATGTAAACAACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR CAA 90 bp | GAGCTTTTGACAAAGTGCCCAAGTCATGAGGGAACCAGGCGGTTCTaGAGATCAAGCATTTCAGCAGGGTGTCATGGGGGAGAGCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: ELLTKCPSHEGTRRF*RSSISAGCHGGEQE Trigger: CTCCTGCTCTCCCCCATGACACCCTGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCCCTCATGACTTGGGCACTTTGTCAAAAGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGGAGGTAGTTTGACCCCAACACAAAGGGGAAAGACAGGGTACCTTTCTCAGAAACCTCCATGCTaGGCCCAGGCCAGACTGAAT | + |
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Preference number: 2 (lower is better) Translates to: EQGGSLTPTQRGKTGYLSQKPPC*AQARLN Trigger: ATTCAGTCTGGCCTGGGCTCAGCATGGAGGTTTCTG...AGAAAGGTACCCTGTCTTTCCCCTTTGTGTTGGGGTCAAACTACCTCCCTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR-3UTR TCA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTCTGGGAGAGCATGGGTaGCAGGGGGCAACGTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPLGEHG*QGATCK Trigger: CTTGCACGTTGCCCCCTGTCACCCATGCTCTCCCAG...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| 3UTR-3UTR CCA 90 bp | CATTGGGGATCAGGAGACTGGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGGCCAGGCCAGACTGAATaGAGAAGGAAAAAGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HWGSGDWIGSRGFSGRVGPGQTE*RRKKSW Trigger: CCAGCTCTTTTTCCTTCTCCATTCAGTCTGGCCTGG...CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GTAACCGCAGTATCTTGTAGCCTAGGTCATAGAATGGCTGAGTCTCCCCCACCCGGCAGGGTCCTGAAATaGGAAAGGGTTGGTGCATTC | + |
|
Preference number: 2 (lower is better) Translates to: VTAVSCSLGHRMAESPPPGRVLK*ERVGAF Trigger: GAATGCACCAACCCTTTCCCATTTCAGGACCCTGCC...GGGTGGGGGAGACTCAGCCATTCTATGACCTAGGCTACAAGATACTGCGGTTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGTTGTTTACATGGAGAGTCAGCACTTGGTTTCCAGGGGTGGGGAGAGATATGTTCAGCAGGGTGTCATaGGGGAGAGCAGGAGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LLFTWRVSTWFPGVGRDMFSRVS*GRAGEG Trigger: TCCCTCTCCTGCTCTCCCCCATGACACCCTGCTGAA...CATATCTCTCCCCACCCCTGGAAACCAAGTGCTGACTCTCCATGTAAACAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 90 bp | GCCTCTGAAGGCAGGGGGTGTTTCTGTCACTGGAGGTGTTGGACTTaGCCCACCAGTTACATGTTAAGGCCTTCACTTAGTCAAGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ASEGRGCFCHWRCWT*PTSYMLRPSLSQAA Trigger: TGCAGCTTGACTAAGTGAAGGCCTTAACATGTAACTGGTGGGCAAAGTCCAACACCTCCAGTGACAGAAACACCCCCTGCCTTCAGAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GTAACCGCAGTATCTTGTAGCCTAGGTCATAGAATGGCTGAGTCTCCCCCACCCCTGCGGGTGGCTTATTaGCTACAGATAGATGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VTAVSCSLGHRMAESPPPLRVAY*LQIDVW Trigger: CCACACATCTATCTGTAGCCAATAAGCCACCCGCAG...GGGTGGGGGAGACTCAGCCATTCTATGACCTAGGCTACAAGATACTGCGGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAACCAGGCGGTTCTTGAGATCAAGCATTTCAGCAGGGTGTCATGGGGGAGAATATGGGATACACCCTaGGGTGGCATATTGGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: GNQAVLEIKHFSRVSWGRIWDTP*GGILED Trigger: ATCCTCCAATATGCCACCCCAGGGTGTATCCCATAT...TCTCCCCCATGACACCCTGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 90 bp | TCTAGGACCCTCTTCTCCTCTTCTTCATTTGCTCAGTTGCTCTCCTaGTCCCTGCACTGCCACAAGTGTCAGCTGGCTGAAATAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SRTLFSSSSFAQLLS*SLHCHKCQLAEIEG Trigger: GCCTTCTATTTCAGCCAGCTGACACTTGTGGCAGTGCAGGGACAAGGAGAGCAACTGAGCAAATGAAGAAGAGGAGAAGAGGGTCCTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 90 bp | TTTCCTCTCTCTAGGACCCTCTTCTCCTCTTCTTCATTTGCTCAGTaGCTCTCCTTGTCCCTGCACTGCCACAAGTGTCAGCTGGCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: FPLSRTLFSSSSFAQ*LSLSLHCHKCQLAE Trigger: TTCAGCCAGCTGACACTTGTGGCAGTGCAGGGACAAGGAGAGCAACTGAGCAAATGAAGAAGAGGAGAAGAGGGTCCTAGAGAGAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCTGGGAGAGCATGGGTaGCAGGGGGCAACGTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LCVPLFINKLGILWSIGDLGEHG*QGATCK Trigger: CTTGCACGTTGCCCCCTGTCACCCATGCTCTCCCAG...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTGTTTACATGGAGAGTCAGCACTTGGTTTCCAGGGGTGGGGAGAGATATGAGCAGGGAGGTAGTTTaGCCCCAACACAAAGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLFTWRVSTWFPGVGRDMSREVV*PQHKGE Trigger: TTCCCCTTTGTGTTGGGGTCAAACTACCTCCCTGCT...CATATCTCTCCCCACCCCTGGAAACCAAGTGCTGACTCTCCATGTAAACAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCATGGGGGAGAGCAGGAGAGGGATCTAGAGTCCAACACCACCACCATAGATTTCATCTTCCATACATaGAGCCAAAGCAGCGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: CHGGEQERDLESNTTTIDFIFHT*SQSSAA Trigger: AGCTGCGCTGCTTTGGCTCCATGTATGGAAGATGAA...ATCTATGGTGGTGGTGTTGGACTCTAGATCCCTCTCCTGCTCTCCCCCATGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGTTGTTTACATGGAGAGTCAGCACTTGGTTTCCAGGGGTGGGGAGAGATATGACGCACAATTTGTCCTaGGTACATGGTGGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LLFTWRVSTWFPGVGRDMTHNLS*VHGGRL Trigger: CAGCCTCCCACCATGTACCCAGGACAAATTGTGCGT...CATATCTCTCCCCACCCCTGGAAACCAAGTGCTGACTCTCCATGTAAACAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTCACTTCCCATCATTCACAGCTACAGTGGCACTCTCTGATGAGTCACGTAAGCAGGGAGGTAGTTTaGCCCCAACACAAAGGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LVTSHHSQLQWHSLMSHVSREVV*PQHKGE Trigger: TTCCCCTTTGTGTTGGGGTCAAACTACCTCCCTGCT...TACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGTACATGGTGGGAGGCTaGGGTCAAACCGATACCGTG | + |
|
Preference number: 2 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGYMVGG*GQTDTV Trigger: CACGGTATCGGTTTGACCTCAGCCTCCCACCATGTA...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTGTTTGTACCTGGGATGATTCTGATGTTGGTCACTTCCCATCATTCACAGGGCAGCAGCCACATCTaGGGGTGGCTTATTGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: CLFVPGMILMLVTSHHSQGSSHI*GWLIGY Trigger: GTAGCCAATAAGCCACCCGCAGATGTGGCTGCTGCC...CTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCCAGGTACAAACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTTGCTCTCCTTGTCCCTaGACTGCCACAAGTGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPCSPCP*TATSVS Trigger: GCTGACACTTGTGGCAGTGCAGGGACAAGGAGAGCA...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGAACCAGGCGGTTCTTGAGATCAAGCATTTCAGCAGGGTGTCATGGGGGAGACTACAGATAGATGTGTaGACCAAAGCAGAACTCATC | + |
|
Preference number: 2 (lower is better) Translates to: GNQAVLEIKHFSRVSWGRLQIDV*TKAELI Trigger: GATGAGTTCTGCTTTGGTCCACACATCTATCTGTAG...TCTCCCCCATGACACCCTGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTCACTTCCCATCATTCACAGCTACAGTGGCACTCTCTGATGAGTCACGTAGGCAGGGTCCTGAAATaGGAAAGGGTTGGTGCATTC | + |
|
Preference number: 2 (lower is better) Translates to: LVTSHHSQLQWHSLMSHVGRVLK*ERVGAF Trigger: GAATGCACCAACCCTTTCCCATTTCAGGACCCTGCC...TACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CATTGGGGATCAGGAGACTGGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGGACATACAACCAGAAGTaGCTTAAGAGCGTAGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: HWGSGDWIGSRGFSGRVGTYNQK*LKSVDG Trigger: ACCATCTACGCTCTTAAGCCACTTCTGGTTGTATGT...CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 90 bp | TTTCTTTCTTTCCTCTCTCTAGGACCCTCTTCTCCTCTTCTTCATTaGCTCAGTTGCTCTCCTTGTCCCTGCACTGCCACAAGTGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FLSFLSLGPSSPLLH*LSCSPCPCTATSVS Trigger: GCTGACACTTGTGGCAGTGCAGGGACAAGGAGAGCAACTGAGCAAATGAAGAAGAGGAGAAGAGGGTCCTAGAGAGAGGAAAGAAAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 90 bp | GGGGTGGTTCCAGTAGTTTGCACTATTCAGCACCAGAGCAAATGCTaGGGCATAAGATCATTCTTGAATCCAGACAAGCCCTCGGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GVVPVVCTIQHQSKC*GIRSFLNPDKPSAS Trigger: AGAAGCCGAGGGCTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAATAGTGCAAACTACTGGAACCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTAGCAACAGTCACCACTaGTCTTCAGGTGAGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPSNSHH*SSGEQG Trigger: TCCCTGCTCACCTGAAGATCAGTGGTGACTGTTGCT...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCGGCAGCAGCCACATCTaGGGGTGGCTTATTGGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: PGRKVENINPPILTNSSVGSSHI*GWLIGY Trigger: GTAGCCAATAAGCCACCCGCAGATGTGGCTGCTGCC...GACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | CATTGGGGATCAGGAGACTGGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGGACCATAGATTCATATTaGATATGGGATACACCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HWGSGDWIGSRGFSGRVGTIDSY*IWDTPW Trigger: CCAGGGTGTATCCCATATGCAATATGAATCTATGGT...CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGTTGTTTACATGGAGAGTCAGCACTTGGTTTCCAGGGGTGGGGAGAGATATGGAGCTTTTGACAAAGTaGCCAAGTCATGAGGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: LLFTWRVSTWFPGVGRDMELLTK*PSHEGT Trigger: GGTTCCCTCATGACTTGGGCACTTTGTCAAAAGCTC...CATATCTCTCCCCACCCCTGGAAACCAAGTGCTGACTCTCCATGTAAACAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGATCCGCCCCATTTCTTaGTGGCAAGCTCGTGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGIRPIS*WQARGF Trigger: AAAGCCACGAGCTTGCCACCAAGAAATGGGGCGGAT...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 90 bp | GCAGGAGAGGGATCTAGAGTCCAACACCACCACCATAGATTCATATaGCATATGGGATACACCCTGGGGTGGCATATTGGAGGATACATA | + |
|
Preference number: 2 (lower is better) Translates to: AGEGSRVQHHHHRFI*HMGYTLGWHIGGYI Trigger: TATGTATCCTCCAATATGCCACCCCAGGGTGTATCCCATATGCAATATGAATCTATGGTGGTGGTGTTGGACTCTAGATCCCTCTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGTTTGTACCTGGGATGATTCTGATGTTGGTCACTTCCCATCATTCACAGCTGTACTGGGAAGGCTaGACTTTGCCCATTGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: CLFVPGMILMLVTSHHSQLYWEG*TLPIVG Trigger: TCCCACAATGGGCAAAGTTCAGCCTTCCCAGTACAG...CTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCCAGGTACAAACAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGTCTCTATCCCATTTGGAGAAGCAAGGGCCAGAAATAACTTCAGTGTCTCTCCGGGCTTCCTTGCTGTaGTTCCCATCAATTCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: ESLSHLEKQGPEITSVSLRASLL*FPSIQV Trigger: TACCTGAATTGATGGGAATCACAGCAAGGAAGCCCG...GAGAGACACTGAAGTTATTTCTGGCCCTTGCTTCTCCAAATGGGATAGAGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATTACATGGTGGGAGGCTaGGGTCAAACCGATACCGTG | + |
|
Preference number: 2 (lower is better) Translates to: LCVPLFINKLGILWSIGDYMVGG*GQTDTV Trigger: CACGGTATCGGTTTGACCTCAGCCTCCCACCATGTA...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | AACTTTTTAAAAAGGCTTCCTCAACAGAGAGTCTCCGCACATACAACCAGAAGTGTCTCCCAGCAGAGCTaGAGCTCTCAACACCACCCA | + |
|
Preference number: 2 (lower is better) Translates to: NFLKRLPQQRVSAHTTRSVSQQS*SSQHHP Trigger: TGGGTGGTGTTGAGAGCTGCAGCTCTGCTGGGAGAC...ACTTCTGGTTGTATGTGCGGAGACTCTCTGTTGAGGAAGCCTTTTTAAAAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCATGCTCTCCTTGTCCCTaGACTGCCACAAGTGTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSCSPCP*TATSVS Trigger: GCTGACACTTGTGGCAGTGCAGGGACAAGGAGAGCA...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTTTAAAAAGGCTTCCTCAACAGAGAGTCTCCGCACATACAACCAGAAGTTTCAGCAGGGTGTCATaGGGGAGAGCAGGAGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: NFLKRLPQQRVSAHTTRSFSRVS*GRAGEG Trigger: TCCCTCTCCTGCTCTCCCCCATGACACCCTGCTGAA...ACTTCTGGTTGTATGTGCGGAGACTCTCTGTTGAGGAAGCCTTTTTAAAAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTGGAAGCCCTTGCCTCTaGGGTGTGATTCTCCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: AWKESRKYKSSHTHQLQCGSPCL*GVILQE Trigger: CTCTTGGAGAATCACACCCCAGAGGCAAGGGCTTCC...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTCAGCACCAGAGCAAATGCTTGGGCATAAGATCATTCTTGAATCCAGACAAGTGGAGAGTCAGCACTTaGTTTCCAGGGGTGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: IQHQSKCLGIRSFLNPDKWRVST*FPGVGR Trigger: TCTCCCCACCCCTGGAAACCAAGTGCTGACTCTCCA...CTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAAGCAACAGTCACCACTaGTCTTCAGGTGAGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSSNSHH*SSGEQG Trigger: TCCCTGCTCACCTGAAGATCAGTGGTGACTGTTGCT...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCCCTTCCCATCCTGTGTaGTGTGCTCTTGTTGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: PGRKVENINPPILTNSSVPSHPV*CALVDQ Trigger: CTGGTCAACAAGAGCACACCACACAGGATGGGAAGG...GACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGTTTGTACCTGGGATGATTCTGATGTTGGTCACTTCCCATCATTCACAGCCAGGCCAGACTGAATaGAGAAGGAAAAAGAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLFVPGMILMLVTSHHSQPGQTE*RRKKSW Trigger: CCAGCTCTTTTTCCTTCTCCATTCAGTCTGGCCTGG...CTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCCAGGTACAAACAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGTTTGTACCTGGGATGATTCTGATGTTGGTCACTTCCCATCATTCACAGGAAGGGAATTCATTCTaGGAGAGCATGGGTGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: CLFVPGMILMLVTSHHSQEGNSF*ESMGDR Trigger: CCTGTCACCCATGCTCTCCCAGAATGAATTCCCTTC...CTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCCAGGTACAAACAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTGATGAGTCACGTATGTaGCACCTGGCAGGATGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: AWKESRKYKSSHTHQLQCDESRM*HLAGWC Trigger: ACACCATCCTGCCAGGTGCCACATACGTGACTCATC...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGATGAGTCACGTATGTaGCACCTGGCAGGATGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSDESRM*HLAGWC Trigger: ACACCATCCTGCCAGGTGCCACATACGTGACTCATC...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAATCCGCCCCATTTCTTaGTGGCAAGCTCGTGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSIRPIS*WQARGF Trigger: AAAGCCACGAGCTTGCCACCAAGAAATGGGGCGGAT...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 90 bp | TGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTGACAATTaGTGGCAGACATGGGCCATACACCATATTACAACTACACCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: CHKPGLSLSLGYPDN*WQTWAIHHITTTPL Trigger: CAGGGGTGTAGTTGTAATATGGTGTATGGCCCATGTCTGCCACAAATTGTCAGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTCAACTGTCCTTTGAGTaGGAGATTAAGGGTCACACT | + |
|
Preference number: 2 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPQLSFE*EIKGHT Trigger: AGTGTGACCCTTAATCTCTCACTCAAAGGACAGTTG...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTTCCTCATGCCAAAGATaGAAATGTACAGCCAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPSSCQR*KCTARS Trigger: GCTTCTGGCTGTACATTTTCATCTTTGGCATGAGGA...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTGTTTACATGGAGAGTCAGCACTTGGTTTCCAGGGGTGGGGAGAGATATGCCAAAATGTCATGGGTaGAGAACAACAGGAATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLFTWRVSTWFPGVGRDMPKCHG*RTTGIF Trigger: GAAAATTCCTGTTGTTCTTCACCCATGACATTTTGG...CATATCTCTCCCCACCCCTGGAAACCAAGTGCTGACTCTCCATGTAAACAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTGGGAAGGTGAGGAGATaGTGTTGCAAACTGAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: AWKESRKYKSSHTHQLQCGKVRR*CCKLRR Trigger: CCTTCTCAGTTTGCAACAGCATCTCCTCACCTTCCC...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTCACTTCCCATCATTCACAGCTACAGTGGCACTCTCTGATGAGTCACGTACTACAGATAGATGTGTaGACCAAAGCAGAACTCATC | + |
|
Preference number: 2 (lower is better) Translates to: LVTSHHSQLQWHSLMSHVLQIDV*TKAELI Trigger: GATGAGTTCTGCTTTGGTCCACACATCTATCTGTAG...TACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCAGGGAGGTAGTTTGACCCCAACACAAAGGGGAAAGACAGGGTACCTTTCTACAACAGGAATTTTCTaGGACAAAACATTTCTACCG | + |
|
Preference number: 2 (lower is better) Translates to: EQGGSLTPTQRGKTGYLSTTGIF*DKTFLP Trigger: CGGTAGAAATGTTTTGTCCCAGAAAATTCCTGTTGT...AGAAAGGTACCCTGTCTTTCCCCTTTGTGTTGGGGTCAAACTACCTCCCTGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCGCTCTAAACCTTGACTaGACCTGCTCATTCCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: PGRKVENINPPILTNSSVALNLD*TCSFPA Trigger: TGCAGGGAATGAGCAGGTCCAGTCAAGGTTTAGAGC...GACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGGCTTCTTTCCTTTCATaGAGGAAAAGGAGCCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGASFLS*RKRSPF Trigger: GAATGGGCTCCTTTTCCTCCATGAAAGGAAAGAAGC...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGTTTGTACCTGGGATGATTCTGATGTTGGTCACTTCCCATCATTCACAGTCCTCATGCCAAAGATaGAAATGTACAGCCAGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: CLFVPGMILMLVTSHHSQSSCQR*KCTARS Trigger: GCTTCTGGCTGTACATTTTCATCTTTGGCATGAGGA...CTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCCAGGTACAAACAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | AACTTTTTAAAAAGGCTTCCTCAACAGAGAGTCTCCGCACATACAACCAGAAGTCGGGCTTCCTTGCTGTaGTTCCCATCAATTCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: NFLKRLPQQRVSAHTTRSRASLL*FPSIQV Trigger: TACCTGAATTGATGGGAATCACAGCAAGGAAGCCCG...ACTTCTGGTTGTATGTGCGGAGACTCTCTGTTGAGGAAGCCTTTTTAAAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGGTCACTTCCCATCATTCACAGCTACAGTGGCACTCTCTGATGAGTCACGTACCAAAATGTCATGGGTaGAGAACAACAGGAATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LVTSHHSQLQWHSLMSHVPKCHG*RTTGIF Trigger: GAAAATTCCTGTTGTTCTTCACCCATGACATTTTGG...TACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGATCCCCCATCTTTCATaGGCACTTTACAAACTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGIPHLS*ALYKLL Trigger: CAGAAGTTTGTAAAGTGCTCATGAAAGATGGGGGAT...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCTTCATTTGCTCAGTTaGTCTCCTTGTCCCTGCACT | + |
|
Preference number: 2 (lower is better) Translates to: AWKESRKYKSSHTHQLQCLHLLS*SPCPCT Trigger: AGTGCAGGGACAAGGAGAGCAACTGAGCAAATGAAG...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCACCTCTACATTCTCTaGCTCAGAGCAAGACTTAGG | + |
|
Preference number: 2 (lower is better) Translates to: LCVPLFINKLGILWSIGDHLYIL*LRARLR Trigger: CCTAAGTCTTGCTCTGAGGCAGAGAATGTAGAGGTG...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTGTGAGGAGATGCTGTTaGAAACTGAGAAGGAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPVRRCC*KLRRKF Trigger: AAACTTCCTTCTCAGTTTGCAACAGCATCTCCTCAC...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGTTGTTTACATGGAGAGTCAGCACTTGGTTTCCAGGGGTGGGGAGAGATATGAATTCAGGTAATTTCTaGAAAACAGTCTCCTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: LLFTWRVSTWFPGVGRDMNSGNF*KTVSSC Trigger: GCATGAGGAGACTGTTTTCCAGAAATTACCTGAATT...CATATCTCTCCCCACCCCTGGAAACCAAGTGCTGACTCTCCATGTAAACAACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 90 bp | TGCACTATTCAGCACCAGAGCAAATGCTTGGGCATAAGATCATTCTaGAATCCAGACAAGCCCTCGGCTTCTATGTACAGCAGAATTTTA | + |
|
Preference number: 2 (lower is better) Translates to: CTIQHQSKCLGIRSF*NPDKPSASMYSRIL Trigger: TAAAATTCTGCTGTACATAGAAGCCGAGGGCTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAATAGTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAACTGTCCTTTGAGTaGGAGATTAAGGGTCACACT | + |
|
Preference number: 2 (lower is better) Translates to: LCVPLFINKLGILWSIGDQLSFE*EIKGHT Trigger: AGTGTGACCCTTAATCTCTCACTCAAAGGACAGTTG...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCTAACAAGGTCTGTGTaGGTTTTCAGGTCAGAAACC | + |
|
Preference number: 2 (lower is better) Translates to: AWKESRKYKSSHTHQLQCLTRSV*VFRSET Trigger: GGTTTCTGACCTGAAAACCCACACAGACCTTGTTAG...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGAACTTTGCCCATTGTaGGAAGGGAATTCATTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSELCPL*EGNSFW Trigger: CCAGAATGAATTCCCTTCCCACAATGGGCAAAGTTC...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTAGTCTCTATCCCATTTaGAGAAGCAAGGGCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: AWKESRKYKSSHTHQLQCSLYPI*RSKGQK Trigger: TTTCTGGCCCTTGCTTCTCCAAATGGGATAGAGACT...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGCTTCTTTCCTTTCATaGAGGAAAAGGAGCCCATTC | + |
|
Preference number: 2 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSASFLS*RKRSPF Trigger: GAATGGGCTCCTTTTCCTCCATGAAAGGAAAGAAGC...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | ATTCAGCACCAGAGCAAATGCTTGGGCATAAGATCATTCTTGAATCCAGACAAGGATGCTGTTGCAAACTaGGAAGGAAGTTTAAACCCA | + |
|
Preference number: 2 (lower is better) Translates to: IQHQSKCLGIRSFLNPDKDAVAN*EGSLNP Trigger: TGGGTTTAAACTTCCTTCTCAGTTTGCAACAGCATC...CTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATGTGAGGAGATGCTGTTaGAAACTGAGAAGGAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LCVPLFINKLGILWSIGDVRRCC*KLRRKF Trigger: AAACTTCCTTCTCAGTTTGCAACAGCATCTCCTCAC...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCACTTGACCATGAGAATTaGCTGAAGAACCCACACAAA | + |
|
Preference number: 2 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSLDHEN*LKNPHK Trigger: TTTGTGTGGGTTCTTCAGGCAATTCTCATGGTCAAG...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAACAACAGGAATTTTCTGGGACAAAACATTTCTACCGGAATCTAACATTTCCTTCCCATCCTGTGTaGTGTGCTCTTGTTGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: EEQQEFSGTKHFYRNLTFPSHPV*CALVDQ Trigger: CTGGTCAACAAGAGCACACCACACAGGATGGGAAGG...AAATGTTAGATTCCGGTAGAAATGTTTTGTCCCAGAAAATTCCTGTTGTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAACAACAGGAATTTTCTGGGACAAAACATTTCTACCGGAATCTAACATTTGAAGGGAATTCATTCTaGGAGAGCATGGGTGACAGG | + |
|
Preference number: 2 (lower is better) Translates to: EEQQEFSGTKHFYRNLTFEGNSF*ESMGDR Trigger: CCTGTCACCCATGCTCTCCCAGAATGAATTCCCTTC...AAATGTTAGATTCCGGTAGAAATGTTTTGTCCCAGAAAATTCCTGTTGTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR TCA 90 bp | AACTTTTTAAAAAGGCTTCCTCAACAGAGAGTCTCCGCACATACAACCAGAAGTAGAAATGGAAAGAGCTaGTCCTTTAAGAAGCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: NFLKRLPQQRVSAHTTRSRNGKS*SFKKLQ Trigger: TTGGAGCTTCTTAAAGGATCAGCTCTTTCCATTTCT...ACTTCTGGTTGTATGTGCGGAGACTCTCTGTTGAGGAAGCCTTTTTAAAAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTAATTCAGGTAATTTCTaGAAAACAGTCTCCTCATGC | + |
|
Preference number: 2 (lower is better) Translates to: AWKESRKYKSSHTHQLQCNSGNF*KTVSSC Trigger: GCATGAGGAGACTGTTTTCCAGAAATTACCTGAATT...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTTTACCCAAAATGTCATaGGTGAAGAACAACAGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: AWKESRKYKSSHTHQLQCLPKMS*VKNNRN Trigger: ATTCCTGTTGTTCTTCACCCATGACATTTTGGGTAA...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTTTAAAAAGGCTTCCTCAACAGAGAGTCTCCGCACATACAACCAGAAGTACAACAGGAATTTTCTaGGACAAAACATTTCTACCG | + |
|
Preference number: 2 (lower is better) Translates to: NFLKRLPQQRVSAHTTRSTTGIF*DKTFLP Trigger: CGGTAGAAATGTTTTGTCCCAGAAAATTCCTGTTGT...ACTTCTGGTTGTATGTGCGGAGACTCTCTGTTGAGGAAGCCTTTTTAAAAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | ACCCACACAAAGTGCAGTCATGGCTCCTCCCAGGTGTaGGGGGTGGTAAACCTGGGTCAGGGCTGGGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: THTKCSHGSSQV*GVVNLGQGWEG Trigger: GCCTTCCCAGCCCTGACCCAGGTTTACCACCCCCCACACCTGGGAGGAGCCATGACTGCACTTTGTGTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR GCA 72 bp | GAGGTCAAACCGATACCGTGGAGGAATGGAAGCCCTTaGCTCTGGGGTGTGATTCTCCAAGAGGGCCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: EVKPIPWRNGSP*LWGVILQEGLD Trigger: GTCAAGGCCCTCTTGGAGAATCACACCCCAGAGGCAAGGGCTTCCATTCCTCCACGGTATCGGTTTGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | GCCCATTGTGGGAAGGGAATTCATTCTGGGAGAGCATaGGTGACAGGGGGCAACGTGCAAGGCTCTTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AHCGKGIHSGRA*VTGGNVQGSLR Trigger: CCTCAAAGAGCCTTGCACGTTGCCCCCTGTCACCCATGCTCTCCCAGAATGAATTCCCTTCCCACAATGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | CTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTaGTGCATTCCATCCAGCCTTAGTGGCTGTACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LRLRQGPEMGKG*CIPSSLSGCTG Trigger: CCCAGTACAGCCACTAAGGCTGGATGGAATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | GGTACATGGTGGGAGGCTGAGGTCAAACCGATACCGTaGAGGAATGGAAGCCCTTGCCTCTGGGGTGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: GTWWEAEVKPIP*RNGSPCLWGVI Trigger: AATCACACCCCAGAGGCAAGGGCTTCCATTCCTCCACGGTATCGGTTTGACCTCAGCCTCCCACCATGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | GGCCAAAGGTTGGCTAGCAGAATCCGCCCCATTTCTTaGTGGCAAGCTCGTGGCTTTGGGAAGGTGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GQRLASRIRPIS*WQARGFGKVRR Trigger: TCTCCTCACCTTCCCAAAGCCACGAGCTTGCCACCAAGAAATGGGGCGGATTCTGCTAGCCAACCTTTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | GTAACCGCAGTATCTTGTAGCCTAGGTCATAGAATGGCTGAGTCTCCCCCACCCGAAGCATGGCAGGCCTaGGGTGGAGTTCACCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: VTAVSCSLGHRMAESPPPEAWQA*GGVHLD Trigger: GTCAAGGTGAACTCCACCCAAGGCCTGCCATGCTTC...GGGTGGGGGAGACTCAGCCATTCTATGACCTAGGCTACAAGATACTGCGGTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGGGATCAGGAGACTGGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGGGAGCAGGGAGGTAGTTaGACCCCAACACAAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HWGSGDWIGSRGFSGRVGEQGGS*TPTQRG Trigger: TCCCCTTTGTGTTGGGGTCAAACTACCTCCCTGCTC...CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR GCA 72 bp | CGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTaGATTCCATCCAGCCTTAGTGGCTGTACTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RLRQGPEMGKGW*IPSSLSGCTGK Trigger: CTTCCCAGTACAGCCACTAAGGCTGGATGGAATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | GCTGAACTTTGCCCATTGTGGGAAGGGAATTCATTCTaGGAGAGCATGGGTGACAGGGGGCAACGTGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: AELCPLWEGNSF*ESMGDRGQRAR Trigger: CCTTGCACGTTGCCCCCTGTCACCCATGCTCTCCCAGAATGAATTCCCTTCCCACAATGGGCAAAGTTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | CAAAGGTTGGCTAGCAGAATCCGCCCCATTTCTTGGTaGCAAGCTCGTGGCTTTGGGAAGGTGAGGAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: QRLASRIRPISW*QARGFGKVRRC Trigger: GCATCTCCTCACCTTCCCAAAGCCACGAGCTTGCCACCAAGAAATGGGGCGGATTCTGCTAGCCAACCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGGGATCAGGAGACTGGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGGCTGTCACTGGAGGTGTaGGACTTTGCCCACCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: HWGSGDWIGSRGFSGRVGLSLEV*DFAHQL Trigger: TAACTGGTGGGCAAAGTCCAACACCTCCAGTGACAG...CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR TCA 72 bp | CAAAGTGCCCAAGTCATGAGGGAACCAGGCGGTTCTTaGGATCAAGCATTTCAGCAGGGTGTCATGGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSAQVMREPGGS*DQAFQQGVMGE Trigger: CTCCCCCATGACACCCTGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCCCTCATGACTTGGGCACTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | ACAGCTACAGTGGCACTCTCTGATGAGTCACGTATGTaGCACCTGGCAGGATGGTGTGTAGGGCCTGCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TATVALSDESRM*HLAGWCVGPAK Trigger: TTTTGCAGGCCCTACACACCATCCTGCCAGGTGCCACATACGTGACTCATCAGAGAGTGCCACTGTAGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | GTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTaGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VGNTVVHWGSGD*IGSRGFSGRVG Trigger: CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR TCA 72 bp | CTCCTTGTCCCTGCACTGCCACAAGTGTCAGCTGGCTaGAATAGAAGGCATACACGCACAATTTGTCCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLVPALPQVSAG*NRRHTRTICPG Trigger: CCCAGGACAAATTGTGCGTGTATGCCTTCTATTTCAGCCAGCTGACACTTGTGGCAGTGCAGGGACAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | AGTGGCTGTACTGGGAAGGCTGAACTTTGCCCATTGTaGGAAGGGAATTCATTCTGGGAGAGCATGGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: SGCTGKAELCPL*EGNSFWESMGD Trigger: GTCACCCATGCTCTCCCAGAATGAATTCCCTTCCCACAATGGGCAAAGTTCAGCCTTCCCAGTACAGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | AAACCGATACCGTGGAGGAATGGAAGCCCTTGCCTCTaGGGTGTGATTCTCCAAGAGGGCCTTGACTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: KPIPWRNGSPCL*GVILQEGLDYE Trigger: TTCATAGTCAAGGCCCTCTTGGAGAATCACACCCCAGAGGCAAGGGCTTCCATTCCTCCACGGTATCGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | ATAGAAGGCATACACGCACAATTTGTCCTGGGTACATaGTGGGAGGCTGAGGTCAAACCGATACCGTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IEGIHAQFVLGT*WEAEVKPIPWR Trigger: CCTCCACGGTATCGGTTTGACCTCAGCCTCCCACCATGTACCCAGGACAAATTGTGCGTGTATGCCTTCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | AACGCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTGCATTGCTGAACTTTGCCCATaGTGGGAAGGGAATTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: NAKLRLRQGPEMGKGWCIAELCP*WEGNSF Trigger: GAATGAATTCCCTTCCCACAATGGGCAAAGTTCAGC...AATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGAACGTGCAAGGCTCTTaGAGGACTGGAGAGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGNVQGS*RTGEGR Trigger: CCTGCCCTCTCCAGTCCTCAAAGAGCCTTGCACGTT...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGGCTCAGTTGCTCTCCTaGTCCCTGCACTGCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGAQLLS*SLHCHK Trigger: CTTGTGGCAGTGCAGGGACAAGGAGAGCAACTGAGC...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | CATTGGGGATCAGGAGACTGGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGGAAGCCTGGTTTATCTTaGTCTCTGGGTTATCCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: HWGSGDWIGSRGFSGRVGKPGLS*SLGYPD Trigger: GTCAGGATAACCCAGAGACAAAGATAAACCAGGCTT...CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR TCA 72 bp | TACCGTGGAGGAATGGAAGCCCTTGCCTCTGGGGTGTaGTTCTCCAAGAGGGCCTTGACTATGAAAAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: YRGGMEALASGV*FSKRALTMKRS Trigger: ACTTCTTTTCATAGTCAAGGCCCTCTTGGAGAATCACACCCCAGAGGCAAGGGCTTCCATTCCTCCACGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | AGTGAGGGTGCTTCTAGGATGCTAACAAGGTCTGTGTaGGTTTTCAGGTCAGAAACCTCCATGCTGAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SEGASRMLTRSV*VFRSETSMLSP Trigger: TGGGCTCAGCATGGAGGTTTCTGACCTGAAAACCCACACAGACCTTGTTAGCATCCTAGAAGCACCCTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | TCTGAAGGCAGGGGGTGTTTCTGTCACTGGAGGTGTTaGACTTTGCCCACCAGTTACATGTTAAGGCCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SEGRGCFCHWRC*TLPTSYMLRPS Trigger: TGAAGGCCTTAACATGTAACTGGTGGGCAAAGTCCAACACCTCCAGTGACAGAAACACCCCCTGCCTTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR TCA 72 bp | TCGCAGGCTGGATTCCCAGCGATCCCCCATCTTTCATaGGCACTTTACAAACTTCTGGAAGAAGTACCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: SQAGFPAIPHLS*ALYKLLEEVPG Trigger: TCCTGGTACTTCTTCCAGAAGTTTGTAAAGTGCTCATGAAAGATGGGGGATCGCTGGGAATCCAGCCTGCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR TCA 72 bp | GAGTCAGCACTTGGTTTCCAGGGGTGGGGAGAGATATaGGAATTGCTAATATGCCAAAGAAGCTGGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ESALGFQGWGEI*ELLICQRSWRG Trigger: GCCTCTCCAGCTTCTTTGGCATATTAGCAATTCTCATATCTCTCCCCACCCCTGGAAACCAAGTGCTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR GCA 72 bp | TGGTGGCAAGCTCGTGGCTTTGGGAAGGTGAGGAGATaGTGTTGCAAACTGAGAAGGAAGTTTAAACCCACT | + |
|
Preference number: 3 (lower is better) Translates to: WWQARGFGKVRR*CCKLRRKFKPT Trigger: AGTGGGTTTAAACTTCCTTCTCAGTTTGCAACAGCATCTCCTCACCTTCCCAAAGCCACGAGCTTGCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR GCA 72 bp | GGTTTCAGTGGTAGGGTTGGGGTGGTTCCAGTAGTTTaGACTATTCAGCACCAGAGCAAATGCTTGGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: GFSGRVGVVPVV*TIQHQSKCLGI Trigger: TATGCCCAAGCATTTGCTCTGGTGCTGAATAGTGCAAACTACTGGAACCACCCCAACCCTACCACTGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | CATCTGCGGGTGGCTTATTGGCTACAGATAGATGTGTaGACCAAAGCAGAACTCATCCCACTTCATGGAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HLRVAYWLQIDV*TKAELIPLHGV Trigger: CACTCCATGAAGTGGGATGAGTTCTGCTTTGGTCCACACATCTATCTGTAGCCAATAAGCCACCCGCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | CCTCATGCCAAAGATGAAAATGTACAGCCAGAAGCATaGCAGGCCTTGGGTGGAGTTCACCTTGACACAACT | + |
|
Preference number: 3 (lower is better) Translates to: PHAKDENVQPEA*QALGGVHLDTT Trigger: AGTTGTGTCAAGGTGAACTCCACCCAAGGCCTGCCATGCTTCTGGCTGTACATTTTCATCTTTGGCATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | CTCTCTGATGAGTCACGTATGTGGCACCTGGCAGGATaGTGTGTAGGGCCTGCAAAATTATACTCACCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LSDESRMWHLAG*CVGPAKLYSPD Trigger: ATCAGGTGAGTATAATTTTGCAGGCCCTACACACCATCCTGCCAGGTGCCACATACGTGACTCATCAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCAACGTGCAAGGCTCTTaGAGGACTGGAGAGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGRKVENINPPILTNSSVNVQGS*RTGEGR Trigger: CCTGCCCTCTCCAGTCCTCAAAGAGCCTTGCACGTT...GACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTGAAGCATGGCAGGCCTaGGGTGGAGTTCACCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: AWKESRKYKSSHTHQLQCEAWQA*GGVHLD Trigger: GTCAAGGTGAACTCCACCCAAGGCCTGCCATGCTTC...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGGCATACACGCACAATTaGTCCTGGGTACATGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGAYTHN*SWVHGG Trigger: CCCACCATGTACCCAGGACAAATTGTGCGTGTATGC...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATAAGAAGGGCCAAAGGTaGGCTAGCAGAATCCGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LCVPLFINKLGILWSIGDKKGQR*ASRIRP Trigger: GGGGCGGATTCTGCTAGCCAACCTTTGGCCCTTCTT...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR GCA 72 bp | TCTTCATTTGCTCAGTTGCTCTCCTTGTCCCTGCACTaGCACAAGTGTCAGCTGGCTGAAATAGAAGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SSFAQLLSLSLH*HKCQLAEIEGI Trigger: TATGCCTTCTATTTCAGCCAGCTGACACTTGTGGCAGTGCAGGGACAAGGAGAGCAACTGAGCAAATGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR GCA 72 bp | CCTTTTCTTACTTCTCCAAGCCTGCAGCACGTGTTATaGTGTCATTCGATCCTTAACTCGCCCTTGACCATG | + |
|
Preference number: 3 (lower is better) Translates to: PFLTSPSLQHVL*CHSILNSPLTM Trigger: CATGGTCAAGGGCGAGTTAAGGATCGAATGACAGCATAACACGTGCTGCAGGCTTGGAGAAGTAAGAAAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | AGATGTGTGGACCAAAGCAGAACTCATCCCACTTCATaGAGTGTTCTGCACCTTTCCATAGCAGGGCTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RCVDQSRTHPTS*SVLHLSIAGLK Trigger: CTTTAGCCCTGCTATGGAAAGGTGCAGAACACTCCATGAAGTGGGATGAGTTCTGCTTTGGTCCACACATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | AAGATGAAAATGTACAGCCAGAAGCATGGCAGGCCTTaGGTGGAGTTCACCTTGACACAACTGTCCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: KMKMYSQKHGRP*VEFTLTQLSFE Trigger: CTCAAAGGACAGTTGTGTCAAGGTGAACTCCACCCAAGGCCTGCCATGCTTCTGGCTGTACATTTTCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | GCCTTGACTATGAAAAGAAGTTTCTTTCTCGCAGGCTaGATTCCCAGCGATCCCCCATCTTTCATGAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: ALTMKRSFFLAG*IPSDPPSFMST Trigger: AGTGCTCATGAAAGATGGGGGATCGCTGGGAATCCAGCCTGCGAGAAAGAAACTTCTTTTCATAGTCAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGTCTCTATCCCATTTGGAGAAGCAAGGGCCAGAAATAACTTCAGTGTCTCTCGGAACCAGGCGGTTCTaGAGATCAAGCATTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ESLSHLEKQGPEITSVSLGTRRF*RSSISA Trigger: TGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCC...GAGAGACACTGAAGTTATTTCTGGCCCTTGCTTCTCCAAATGGGATAGAGACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTGAGCAGGGAGGTAGTTaGACCCCAACACAAAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: AWKESRKYKSSHTHQLQCEQGGS*TPTQRG Trigger: TCCCCTTTGTGTTGGGGTCAAACTACCTCCCTGCTC...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGAGGAATGGAAGCCCTaGCCTCTGGGGTGTGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSEEWKP*PLGCDS Trigger: AGAATCACACCCCAGAGGCAAGGGCTTCCATTCCTC...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTTCTTCATTTGCTCAGTaGCTCTCCTTGTCCCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPSSFAQ*LSLSLH Trigger: GTGCAGGGACAAGGAGAGCAACTGAGCAAATGAAGA...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTGTTTGTACCTGGGATGATTCTGATGTTGGTCACTTCCCATCATTCACAGTCTGCGGGTGGCTTATaGGCTACAGATAGATGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CLFVPGMILMLVTSHHSQSAGGL*ATDRCV Trigger: CACACATCTATCTGTAGCCAATAAGCCACCCGCAGA...CTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCCAGGTACAAACAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTGCTGAACTTTGCCCATaGTGGGAAGGGAATTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPAELCP*WEGNSF Trigger: GAATGAATTCCCTTCCCACAATGGGCAAAGTTCAGC...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCTGTCACTGGAGGTGTaGGACTTTGCCCACCAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: AWKESRKYKSSHTHQLQCLSLEV*DFAHQL Trigger: TAACTGGTGGGCAAAGTCCAACACCTCCAGTGACAG...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGGGTGAGGAGATGCTGTaGCAAACTGAGAAGGAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGGEEML*QTEKEV Trigger: AACTTCCTTCTCAGTTTGCAACAGCATCTCCTCACC...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGCACCAGAGCAAATGCTTGGGCATAAGATCATTCTTGAATCCAGACAAGAGGCTTCTTATGGCTTaGTCCCCAGACACACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IQHQSKCLGIRSFLNPDKRLLMA*SPDTLQ Trigger: CTGCAGTGTGTCTGGGGACAAAGCCATAAGAAGCCT...CTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR TCA 72 bp | GGTAATTTCTGGAAAACAGTCTCCTCATGCCAAAGATaGAAATGTACAGCCAGAAGCATGGCAGGCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GNFWKTVSSCQR*KCTARSMAGLG Trigger: CCCAAGGCCTGCCATGCTTCTGGCTGTACATTTTCATCTTTGGCATGAGGAGACTGTTTTCCAGAAATTACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR GCA 72 bp | GATCTAGAGTCCAACACCACCACCATAGATTCATATTaGATATGGGATACACCCTGGGGTGGCATATTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DLESNTTTIDSY*IWDTPWGGILE Trigger: CTCCAATATGCCACCCCAGGGTGTATCCCATATGCAATATGAATCTATGGTGGTGGTGTTGGACTCTAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | ACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTaGGTTATCCTGACAATTTGTGGCAGACATGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TVSVTSLVYLCL*VILTICGRHGP Trigger: TGGCCCATGTCTGCCACAAATTGTCAGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAACCAGGCGGTTCTaGAGATCAAGCATTTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSGTRRF*RSSISA Trigger: TGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCC...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTCACTTCCCATCATTCACAGCTACAGTGGCACTCTCTGATGAGTCACGTAAGACCATTCAAAAGATaGAGCCTTCCCTTTACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LVTSHHSQLQWHSLMSHVRPFKR*SLPFTQ Trigger: TTGGGTAAAGGGAAGGCTCAATCTTTTGAATGGTCT...TACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR TCA 72 bp | AGGATGGTGTGTAGGGCCTGCAAAATTATACTCACCTaGTATGTCACCTCTACATTCTCTGCCTCAGAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: RMVCRACKIILT*YVTSTFSASEQ Trigger: TTGCTCTGAGGCAGAGAATGTAGAGGTGACATATCAGGTGAGTATAATTTTGCAGGCCCTACACACCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | TTGTCTCTGGGTTATCCTGACAATTTGTGGCAGACATaGGCCATACACCATATTACAACTACACCCCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLGYPDNLWQT*AIHHITTTPLL Trigger: CAACAGGGGTGTAGTTGTAATATGGTGTATGGCCCATGTCTGCCACAAATTGTCAGGATAACCCAGAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATTGGAGGTGTTGGACTTaGCCCACCAGTTACATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LCVPLFINKLGILWSIGDWRCWT*PTSYML Trigger: TAACATGTAACTGGTGGGCAAAGTCCAACACCTCCA...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | AACTTTTTAAAAAGGCTTCCTCAACAGAGAGTCTCCGCACATACAACCAGAAGTTCTTCATTTGCTCAGTaGCTCTCCTTGTCCCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NFLKRLPQQRVSAHTTRSSSFAQ*LSLSLH Trigger: GTGCAGGGACAAGGAGAGCAACTGAGCAAATGAAGA...ACTTCTGGTTGTATGTGCGGAGACTCTCTGTTGAGGAAGCCTTTTTAAAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR TCA 72 bp | TCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTaGCAATTTGTGGCAGACATGGGCCATACACCATAT | + |
|
Preference number: 3 (lower is better) Translates to: SQAWFIFVSGLS*QFVADMGHTPY Trigger: ATATGGTGTATGGCCCATGTCTGCCACAAATTGTCAGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | AAGAAGCTCCAAGAGATATTTTTCATCTTCCATACATaGAGCCAAAGCAGCGCAGCTCCTGCTAAGAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: KKLQEIFFIFHT*SQSSAAPAKKV Trigger: AACCTTCTTAGCAGGAGCTGCGCTGCTTTGGCTCCATGTATGGAAGATGAAAAATATCTCTTGGAGCTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCGGGATGATTCTGATGTaGGTCACTTCCCATCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: PGRKVENINPPILTNSSVGMILM*VTSHHS Trigger: TGAATGATGGGAAGTGACCAACATCAGAATCATCCC...GACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGCACCAGAGCAAATGCTTGGGCATAAGATCATTCTTGAATCCAGACAAGGGGATGATTCTGATGTaGGTCACTTCCCATCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: IQHQSKCLGIRSFLNPDKGMILM*VTSHHS Trigger: TGAATGATGGGAAGTGACCAACATCAGAATCATCCC...CTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR GCA 72 bp | GTTCCAGTAGTTTGCACTATTCAGCACCAGAGCAAATaGTTGGGCATAAGATCATTCTTGAATCCAGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: VPVVCTIQHQSK*LGIRSFLNPDK Trigger: CTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAATAGTGCAAACTACTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CCA 72 bp | CATAGATTCATATTGCATATGGGATACACCCTGGGGTaGCATATTGGAGGATACATAGAACAGATACGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HRFILHMGYTLG*HIGGYIEQIRA Trigger: TGCACGTATCTGTTCTATGTATCCTCCAATATGCCACCCCAGGGTGTATCCCATATGCAATATGAATCTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR-3UTR CAA 90 bp | ATTCAGCACCAGAGCAAATGCTTGGGCATAAGATCATTCTTGAATCCAGACAAGTTCTCCAAGAGGGCCTaGACTATGAAAAGAAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: IQHQSKCLGIRSFLNPDKFSKRA*TMKRSF Trigger: GAAACTTCTTTTCATAGTCAAGGCCCTCTTGGAGAA...CTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR TCA 72 bp | TCTATGAACTGTGATGTGGTCAGAAATGGAAAGAGCTaGTCCTTTAAGAAGCTCCAAGAGATATTTTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: SMNCDVVRNGKS*SFKKLQEIFFI Trigger: GATGAAAAATATCTCTTGGAGCTTCTTAAAGGATCAGCTCTTTCCATTTCTGACCACATCACAGTTCATAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCATCCTGTGTGGTGTGGCTCCGGGTCGGGCTaGTCACAGGACTCTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLSTPPRHPGSPSHPVWCGSGSG*SQDSAS Trigger: CGAAGCAGAGTCCTGTGAGCAGCCCGACCCGGAGCC...ACACCACACAGGATGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | AGAGCATGGGTGACAGGGGGCAACGTGCAAGGCTCTTaGAGGACTGGAGAGGGCAGGGCGAGGCAGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAWVTGGNVQGS*RTGEGRARQQP Trigger: TGGCTGCTGCCTCGCCCTGCCCTCTCCAGTCCTCAAAGAGCCTTGCACGTTGCCCCCTGTCACCCATGCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCAGAGCTGCAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCACTGCTCACAGGACTCTaGTTCGGAGATAATGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSRAAALNTTQASREPFPLLTGL*FGDNAC Trigger: GCAGGCATTATCTCCGAAGCAGAGTCCTGTGAGCAG...TGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTGCAGCTCTGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAGAGCTGCAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCAGTTCCTAAGCGGGCCTaGGCAACGGTCAGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRAAALNTTQASREPFPVPKRA*ATVSFS Trigger: TGAAAAACTGACCGTTGCCCAGGCCCGCTTAGGAAC...TGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTGCAGCTCTGCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCATCCTGTGTGGTGTATCAGCAAATGGGGCTaGTGCAGTCAGGGTCAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QLSTPPRHPGSPSHPVWCISKWG*CSQGQS Trigger: CGACTGACCCTGACTGCACCAGCCCCATTTGCTGAT...ACACCACACAGGATGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR TCA 90 bp | CAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCATCCTGTGTGGTGTACGGTCAGTTTTTCATaGGGTGCTTGGCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLSTPPRHPGSPSHPVWCTVSFS*GAWHWQ Trigger: CTGCCAGTGCCAAGCACCTCATGAAAAACTGACCGT...ACACCACACAGGATGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCATCCTGTGTGGTGTTTCGGAGATAATGCCTaGAGCATCCGGCTACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLSTPPRHPGSPSHPVWCFGDNA*SIRLLL Trigger: GAGGAGTAGCCGGATGCTGCAGGCATTATCTCCGAA...ACACCACACAGGATGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | CAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCATCCTGTGTGGTGTGGTCAGTCGAGGCTGTaGGCATGTGTGCTCTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLSTPPRHPGSPSHPVWCGQSRL*ACVLYF Trigger: GAAATAGAGCACACATGCCCACAGCCTCGACTGACC...ACACCACACAGGATGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGCAGAGCTGCAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCAACCAGCAGAGGAGTATaGAATATCATCGTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRAAALNTTQASREPFPTSRGV*NIIVSH Trigger: GTGGCTCACGATGATATTCCATACTCCTCTGCTGGT...TGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTGCAGCTCTGCTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | CAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCATCCTGTGTGGTGTGGCTGTGGGCATGTGTaGTCTATTTCCTCCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QLSTPPRHPGSPSHPVWCGCGHV*SISSMV Trigger: AACCATGGAGGAAATAGAGCACACATGCCCACAGCC...ACACCACACAGGATGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR TCA 90 bp | AACGCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTGCATTACGGTCAGTTTTTCATaGGGTGCTTGGCACTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NAKLRLRQGPEMGKGWCITVSFS*GAWHWQ Trigger: CTGCCAGTGCCAAGCACCTCATGAAAAACTGACCGT...AATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR TCA 90 bp | AACGCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTGCATTATAAGTGCCCTTGCGTaGCCTGAGTGGAAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NAKLRLRQGPEMGKGWCIISALA*PEWKRS Trigger: TGACCTCTTCCACTCAGGTCACGCAAGGGCACTTAT...AATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR TCA 90 bp | CATGGAGCCAAAGCAGCGCAGCTCCTGCTAAGAAGGTTTGTGTGGTTATTTCTTCCTCGCTCATGCTGCTaGTGGAGGCTGAGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGAKAAQLLLRRFVWLFLPRSCC*WRLRLL Trigger: AAGCAGCCTCAGCCTCCATCAGCAGCATGAGCGAGG...AAGAAATAACCACACAAACCTTCTTAGCAGGAGCTGCGCTGCTTTGGCTCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | GGGAACCAGGCGGTTCTTGAGATCAAGCATTTCAGCAGGGTGTCATGGGGGAGACAGTTTTTCATGAGGTaGTTGGCACTGGCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GNQAVLEIKHFSRVSWGRQFFMR*LALAAG Trigger: TCCAGCTGCCAGTGCCAAGCACCTCATGAAAAACTG...TCTCCCCCATGACACCCTGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | ACAAAGTGCCCAAGTCATGAGGGAACCAGGCGGTTCTaGAGATCAAGCATTTCAGCAGGGTGTCATGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKCPSHEGTRRF*RSSISAGCHGG Trigger: TCCCCCATGACACCCTGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCCCTCATGACTTGGGCACTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR TCA 90 bp | GTAACCGCAGTATCTTGTAGCCTAGGTCATAGAATGGCTGAGTCTCCCCCACCCTTCCTCCATGGTTTCTaGGGGAGGCTCATTGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTAVSCSLGHRMAESPPPFLHGF*GRLIGK Trigger: CTTTCCAATGAGCCTCCCTCAGAAACCATGGAGGAA...GGGTGGGGGAGACTCAGCCATTCTATGACCTAGGCTACAAGATACTGCGGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR GCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTGGCTCCGGGTCGGGCTaGTCACAGGACTCTGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AWKESRKYKSSHTHQLQCGSGSG*SQDSAS Trigger: CGAAGCAGAGTCCTGTGAGCAGCCCGACCCGGAGCC...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | AACGCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTGCATTACCAGCAGAGGAGTATaGAATATCATCGTGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NAKLRLRQGPEMGKGWCITSRGV*NIIVSH Trigger: GTGGCTCACGATGATATTCCATACTCCTCTGCTGGT...AATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | CATTGGGGATCAGGAGACTGGATTGGGTCTAGGGGTTTCAGTGGTAGGGTTGGGGGGAAACAGTGTTTTTaGTTGCATAAGTGCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HWGSGDWIGSRGFSGRVGGKQCF*LHKCPC Trigger: GCAAGGGCACTTATGCAAGCAAAAACACTGTTTCCC...CCCAACCCTACCACTGAAACCCCTAGACCCAATCCAGTCTCCTGATCCCCAATG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | TGTCATGGGGGAGAGCAGGAGAGGGATCTAGAGTCCAACACCACCACCATAGATCTGAGGGAGGCTCATTaGAAAGGGATTTTGGGATAC | + |
|
Preference number: 4 (lower is better) Translates to: CHGGEQERDLESNTTTIDLREAH*KGILGY Trigger: GTATCCCAAAATCCCTTTCCAATGAGCCTCCCTCAG...ATCTATGGTGGTGGTGTTGGACTCTAGATCCCTCTCCTGCTCTCCCCCATGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR CCA 90 bp | AACGCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTGCATTTTTTTCCAGAAACTCTaGAGTAAGAGTCCATGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NAKLRLRQGPEMGKGWCIFFQKL*SKSPWR Trigger: GCGCCATGGACTCTTACTCCAGAGTTTCTGGAAAAA...AATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGTT 51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | CTTAGTGGCTGTACTGGGAAGGCTGAACTTTGCCCATaGTGGGAAGGGAATTCATTCTGGGAGAGCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSGCTGKAELCP*WEGNSFWESMG Trigger: ACCCATGCTCTCCCAGAATGAATTCCCTTCCCACAATGGGCAAAGTTCAGCCTTCCCAGTACAGCCACTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR TCA 90 bp | CATGGAGCCAAAGCAGCGCAGCTCCTGCTAAGAAGGTTTGTGTGGTTATTTCTTATAAGTGCCCTTGCGTaGCCTGAGTGGAAGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGAKAAQLLLRRFVWLFLISALA*PEWKRS Trigger: TGACCTCTTCCACTCAGGTCACGCAAGGGCACTTAT...AAGAAATAACCACACAAACCTTCTTAGCAGGAGCTGCGCTGCTTTGGCTCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCCCTCGCTCATGCTGCTaGTGGAGGCTGAGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRKVENINPPILTNSSVPRSCC*WRLRLL Trigger: AAGCAGCCTCAGCCTCCATCAGCAGCATGAGCGAGG...GACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | TTGGTCACTTCCCATCATTCACAGCTACAGTGGCACTCTCTGATGAGTCACGTAGGATTCATCAGCAAATaGGGCTGGTGCAGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVTSHHSQLQWHSLMSHVGFISK*GWCSQG Trigger: ACCCTGACTGCACCAGCCCCATTTGCTGATGAATCC...TACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR TCA 90 bp | TTGGTCACTTCCCATCATTCACAGCTACAGTGGCACTCTCTGATGAGTCACGTATGCCCTTGCGTGACCTaGGTGGAAGAGGTCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LVTSHHSQLQWHSLMSHVCPCVT*VEEVKY Trigger: ATATTTGACCTCTTCCACTCAGGTCACGCAAGGGCA...TACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGTTCGGAGATAATGCCTaGAGCATCCGGCTACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGFGDNA*SIRLLL Trigger: GAGGAGTAGCCGGATGCTGCAGGCATTATCTCCGAA...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | GGATACATAGAACAGATACGTGCAGGTAGCACCCCCTATCGGTATACTAAGTGTGGATTCATCAGCAAATaGGGCTGGTGCAGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GYIEQIRAGSTPYRYTKCGFISK*GWCSQG Trigger: ACCCTGACTGCACCAGCCCCATTTGCTGATGAATCC...ACACTTAGTATACCGATAGGGGGTGCTACCTGCACGTATCTGTTCTATGTATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | GGATACATAGAACAGATACGTGCAGGTAGCACCCCCTATCGGTATACTAAGTGTGTTCCTAAGCGGGCCTaGGCAACGGTCAGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GYIEQIRAGSTPYRYTKCVPKRA*ATVSFS Trigger: TGAAAAACTGACCGTTGCCCAGGCCCGCTTAGGAAC...ACACTTAGTATACCGATAGGGGGTGCTACCTGCACGTATCTGTTCTATGTATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | CATGGAGCCAAAGCAGCGCAGCTCCTGCTAAGAAGGTTTGTGTGGTTATTTCTTCTTCCATGCACCATCTaGCCCAAACAGTTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGAKAAQLLLRRFVWLFLLPCTI*PKQFQE Trigger: TTCCTGGAACTGTTTGGGCCAGATGGTGCATGGAAG...AAGAAATAACCACACAAACCTTCTTAGCAGGAGCTGCGCTGCTTTGGCTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTGAACATCTGCTTCCATaGACCATCTGGCCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPEHLLP*TIWPKQ Trigger: CTGTTTGGGCCAGATGGTGCATGGAAGCAGATGTTC...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTTTGTACCTGGGATGATTCTGATGTTGGTCACTTCCCATCATTCACAGCGGCTACTCCTCTCCTaGAACATCTGCTTCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLFVPGMILMLVTSHHSQRLLLS*NICFHA Trigger: TGCATGGAAGCAGATGTTCCAGGAGAGGAGTAGCCG...CTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCCAGGTACAAACAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | ATTCAGCACCAGAGCAAATGCTTGGGCATAAGATCATTCTTGAATCCAGACAAGATCAGCAAATGGGGCTaGTGCAGTCAGGGTCTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: IQHQSKCLGIRSFLNPDKISKWG*CSQGLA Trigger: CGCAAGACCCTGACTGCACCAGCCCCATTTGCTGAT...CTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | ATTCAGCACCAGAGCAAATGCTTGGGCATAAGATCATTCTTGAATCCAGACAAGCTGCTCACAGGACTCTaGTTCGGAGATAATGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IQHQSKCLGIRSFLNPDKLLTGL*FGDNAC Trigger: GCAGGCATTATCTCCGAAGCAGAGTCCTGTGAGCAG...CTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | CATGGAGCCAAAGCAGCGCAGCTCCTGCTAAGAAGGTTTGTGTGGTTATTTCTTTTTTTCCAGAAACTCTaGAGTAAGAGTCCATGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: HGAKAAQLLLRRFVWLFLFFQKL*SKSPWR Trigger: GCGCCATGGACTCTTACTCCAGAGTTTCTGGAAAAA...AAGAAATAACCACACAAACCTTCTTAGCAGGAGCTGCGCTGCTTTGGCTCCATG 47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | TATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCAGGAGACTGGATTGGGTTGTCCACCTGGTTCTaGAAACGGTACTTCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: YKQVGNTVVHWGSGDWIGLSTWF*KRYFFS Trigger: CGAGAAGAAGTACCGTTTCCAGAACCAGGTGGACAA...CCCAATCCAGTCTCCTGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCACGGCTACTCCTCTCCTaGAACATCTGCTTCCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSRLLLS*NICFHA Trigger: TGCATGGAAGCAGATGTTCCAGGAGAGGAGTAGCCG...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | GGATCTAGAGTCCAACACCACCACCATAGATTCATATaGCATATGGGATACACCCTGGGGTGGCATATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSRVQHHHHRFI*HMGYTLGWHIG Trigger: TCCAATATGCCACCCCAGGGTGTATCCCATATGCAATATGAATCTATGGTGGTGGTGTTGGACTCTAGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | ACATGGGCCATACACCATATTACAACTACACCCCTGTaGTTTACATGGAGAGTCAGCACTTGGTTTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TWAIHHITTTPL*FTWRVSTWFPG Trigger: CCCTGGAAACCAAGTGCTGACTCTCCATGTAAACAACAGGGGTGTAGTTGTAATATGGTGTATGGCCCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTGAACATCTGCTTCCATaGACCATCTGGCCCAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: AWKESRKYKSSHTHQLQCEHLLP*TIWPKQ Trigger: CTGTTTGGGCCAGATGGTGCATGGAAGCAGATGTTC...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTTTCATCTTGTCCACCTaGTTCTGGAAACGGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPFILST*FWKRYF Trigger: GAAGTACCGTTTCCAGAACCAGGTGGACAAGATGAA...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | CTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCACTTCCATGCACCATCTaGCCCAAACAGTTCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRPFIYKQVGNTVVHWGSLPCTI*PKQFQE Trigger: TTCCTGGAACTGTTTGGGCCAGATGGTGCATGGAAG...TGATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | CTTAAGTGTCTGTTTGTACCTGGGATGATTCTGATGTaGGTCACTTCCCATCATTCACAGCTACAGTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKCLFVPGMILM*VTSHHSQLQWH Trigger: GTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCCAGGTACAAACAGACACTTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | CCAGTAGTTTGCACTATTCAGCACCAGAGCAAATGCTaGGGCATAAGATCATTCTTGAATCCAGACAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVVCTIQHQSKC*GIRSFLNPDKP Trigger: GGGCTTGTCTGGATTCAAGAATGATCTTATGCCCAAGCATTTGCTCTGGTGCTGAATAGTGCAAACTACTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | AACTTTTTAAAAAGGCTTCCTCAACAGAGAGTCTCCGCACATACAACCAGAAGTCAGTTTTTCATGAGGTaGTTGGCACTGGCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NFLKRLPQQRVSAHTTRSQFFMR*LALAAG Trigger: TCCAGCTGCCAGTGCCAAGCACCTCATGAAAAACTG...ACTTCTGGTTGTATGTGCGGAGACTCTCTGTTGAGGAAGCCTTTTTAAAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTTTGTCCACCTGGTTCTaGAAACGGTACTTCTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AWKESRKYKSSHTHQLQCLSTWF*KRYFFS Trigger: CGAGAAGAAGTACCGTTTCCAGAACCAGGTGGACAA...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR TCA 90 bp | AACTTTTTAAAAAGGCTTCCTCAACAGAGAGTCTCCGCACATACAACCAGAAGTTGGGATACCTGTTTCTaGCTCAGCATCAGTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NFLKRLPQQRVSAHTTRSWDTCF*LSISGK Trigger: CTTACCACTGATGCTGAGTCAGAAACAGGTATCCCA...ACTTCTGGTTGTATGTGCGGAGACTCTCTGTTGAGGAAGCCTTTTTAAAAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR CCA 90 bp | GGATACATAGAACAGATACGTGCAGGTAGCACCCCCTATCGGTATACTAAGTGTTTCTGTTCTTTGTGTTaGAACAAACATGCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GYIEQIRAGSTPYRYTKCFCSLC*NKHACF Trigger: GAAGCAGGCATGTTTGTTCCAACACAAAGAACAGAA...ACACTTAGTATACCGATAGGGGGTGCTACCTGCACGTATCTGTTCTATGTATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CCA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTTTCATCTTGTCCACCTaGTTCTGGAAACGGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AWKESRKYKSSHTHQLQCFILST*FWKRYF Trigger: GAAGTACCGTTTCCAGAACCAGGTGGACAAGATGAA...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | CGTGCAGGTAGCACCCCCTATCGGTATACTAAGTGTTaGTTACATCAAACTGTTATTCGAGTCTATGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: RAGSTPYRYTKC*LHQTVIRVYEL Trigger: CAGTTCATAGACTCGAATAACAGTTTGATGTAACAAACACTTAGTATACCGATAGGGGGTGCTACCTGCACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | CCTGGTTTATCTTTGTCTCTGGGTTATCCTGACAATTaGTGGCAGACATGGGCCATACACCATATTACAACT | + |
|
Preference number: 4 (lower is better) Translates to: PGLSLSLGYPDN*WQTWAIHHITT Trigger: AGTTGTAATATGGTGTATGGCCCATGTCTGCCACAAATTGTCAGGATAACCCAGAGACAAAGATAAACCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR TCA 90 bp | AAGCCACACTGTGTCTGTCACAAGCCTGGTTTATCTTTGTCTCTGGGTTATCCTGCCAATAAACTCTCTTaGTTTTTCTTCCCACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPHCVCHKPGLSLSLGYPANKLS*FFFPLL Trigger: CAAAAGTGGGAAGAAAAATCAAGAGAGTTTATTGGC...AGGATAACCCAGAGACAAAGATAAACCAGGCTTGTGACAGACACAGTGTGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAACAACAGGAATTTTCTGGGACAAAACATTTCTACCGGAATCTAACATTTGTGCAGTCAGGGTCTTaGGTGAGAATTCGTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EEQQEFSGTKHFYRNLTFVQSGS*VRIRPC Trigger: ACAAGGACGAATTCTCACGCAAGACCCTGACTGCAC...AAATGTTAGATTCCGGTAGAAATGTTTTGTCCCAGAAAATTCCTGTTGTTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113933.9 |
||
| CDS-3UTR TCA 90 bp | CCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTCGCCAATAAACTCTCTTaGTTTTTCTTCCCACTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGRKVENINPPILTNSSVANKLS*FFFPLL Trigger: CAAAAGTGGGAAGAAAAATCAAGAGAGTTTATTGGC...GACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| 3UTR CAA 72 bp | GAAATAACTTCAGTGTCTCTCAGACCATTCAAAAGATaGAGCCTTCCCTTTACCCAAAATGTCATGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: EITSVSLRPFKR*SLPFTQNVMGE Trigger: TTCACCCATGACATTTTGGGTAAAGGGAAGGCTCAATCTTTTGAATGGTCTGAGAGACACTGAAGTTATTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR GCA 90 bp | GAAGAACAACAGGAATTTTCTGGGACAAAACATTTCTACCGGAATCTAACATTTGGGAAACAGTGTTTTTaGTTGCATAAGTGCCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEQQEFSGTKHFYRNLTFGKQCF*LHKCPC Trigger: GCAAGGGCACTTATGCAAGCAAAAACACTGTTTCCC...AAATGTTAGATTCCGGTAGAAATGTTTTGTCCCAGAAAATTCCTGTTGTTCTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS GCA 90 bp | CTCCGGGTCGGGCTGCTCACAGGACTCTGCTTCGGAGATAATGCCTaGAGCATCCGGCTACTCCTCTCCTGGAACATCTGCTTCCATGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRVGLLTGLCFGDNA*SIRLLLSWNICFHA Trigger: TGCATGGAAGCAGATGTTCCAGGAGAGGAGTAGCCGGATGCTGCAGGCATTATCTCCGAAGCAGAGTCCTGTGAGCAGCCCGACCCGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS CCA 90 bp | CCTGGGCAACGGTCAGTTTTTCATGAGGTGCTTGGCACTGGCAGCTaGATTCATCAGCAAATGGGGCTGGTGCAGTCAGGGTCTTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGQRSVFHEVLGTGS*IHQQMGLVQSGSCV Trigger: CACGCAAGACCCTGACTGCACCAGCCCCATTTGCTGATGAATCCAGCTGCCAGTGCCAAGCACCTCATGAAAAACTGACCGTTGCCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113933.9 |
||
| CDS CCA 90 bp | TTTTTCATGAGGTGCTTGGCACTGGCAGCTGGATTCATCAGCAAATaGGGCTGGTGCAGTCAGGGTCAGTCGAGGCTGTGGGCATGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FFMRCLALAAGFISK*GWCSQGQSRLWACV Trigger: CACACATGCCCACAGCCTCGACTGACCCTGACTGCACCAGCCCCATTTGCTGATGAATCCAGCTGCCAGTGCCAAGCACCTCATGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR CAA 90 bp | CCCAGCAGAGCTGCAGCTCTCAACACCACCCAGGCATCCCGGGAGCCCTTCCCAGCCACAAAGTCAATCTaGTGTTTTTCCAGAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: PSRAAALNTTQASREPFPATKSI*CFSRNS Trigger: AGAGTTTCTGGAAAAACACAAGATTGACTTTGTGGC...TGGGAAGGGCTCCCGGGATGCCTGGGTGGTGTTGAGAGCTGCAGCTCTGCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | TGTCATGGGGGAGAGCAGGAGAGGGATCTAGAGTCCAACACCACCACCATAGATCTGACGTTCAGCTCCTaGGCTGTGTACCCTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CHGGEQERDLESNTTTIDLTFSS*AVYPLW Trigger: CCAGAGAGGGTACACAGCCAAGGAGCTGAACGTCAG...ATCTATGGTGGTGGTGTTGGACTCTAGATCCCTCTCCTGCTCTCCCCCATGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS TCA 90 bp | TCAACTGGTGTTCCTAAGCGGGCCTGGGCAACGGTCAGTTTTTCATaGGGTGCTTGGCACTGGCAGCTGGATTCATCAGCAAATGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: STGVPKRAWATVSFS*GAWHWQLDSSANGA Trigger: AGCCCCATTTGCTGATGAATCCAGCTGCCAGTGCCAAGCACCTCATGAAAAACTGACCGTTGCCCAGGCCCGCTTAGGAACACCAGTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | AACGCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTGCATTAAACAGTGTTTTTGCTaGCATAAGTGCCCTTGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: NAKLRLRQGPEMGKGWCIKQCFC*HKCPCV Trigger: CACGCAAGGGCACTTATGCAAGCAAAAACACTGTTT...AATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | AACGCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTGCATTCTTCTGTTCTTTGTGTaGGAACAAACATGCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NAKLRLRQGPEMGKGWCILLFFV*EQTCLL Trigger: AAGCAGGCATGTTTGTTCCAACACAAAGAACAGAAG...AATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS CCA 90 bp | GGCATGTGTGCTCTATTTCCTCCATGGTTTCTGAGGGAGGCTCATTaGAAAGGGATTTTGGGATACCTGTTTCTGACTCAGCATCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GMCALFPPWFLREAH*KGILGYLFLTQHQW Trigger: CCACTGATGCTGAGTCAGAAACAGGTATCCCAAAATCCCTTTCCAATGAGCCTCCCTCAGAAACCATGGAGGAAATAGAGCACACATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR CAA 90 bp | CATGGAGCCAAAGCAGCGCAGCTCCTGCTAAGAAGGTTTGTGTGGTTATTTCTTTTTTTCATGAGGTGCTaGGCACTGGCAGCTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: HGAKAAQLLLRRFVWLFLFFMRC*ALAAGF Trigger: GAATCCAGCTGCCAGTGCCAAGCACCTCATGAAAAA...AAGAAATAACCACACAAACCTTCTTAGCAGGAGCTGCGCTGCTTTGGCTCCATG 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | GGGAACCAGGCGGTTCTTGAGATCAAGCATTTCAGCAGGGTGTCATGGGGGAGAGCCACAAAGTCAATCTaGTGTTTTTCCAGAAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: GNQAVLEIKHFSRVSWGRATKSI*CFSRNS Trigger: AGAGTTTCTGGAAAAACACAAGATTGACTTTGTGGC...TCTCCCCCATGACACCCTGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATCTGACGTTCAGCTCCTaGGCTGTGTACCCTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LCVPLFINKLGILWSIGDLTFSS*AVYPLW Trigger: CCAGAGAGGGTACACAGCCAAGGAGCTGAACGTCAG...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | TGTCATGGGGGAGAGCAGGAGAGGGATCTAGAGTCCAACACCACCACCATAGATACCTTTTCTTTCATCTaGTCCACCTGGTTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CHGGEQERDLESNTTTIDTFSFI*STWFWK Trigger: TTTCCAGAACCAGGTGGACAAGATGAAAGAAAAGGT...ATCTATGGTGGTGGTGTTGGACTCTAGATCCCTCTCCTGCTCTCCCCCATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | GGGAACCAGGCGGTTCTTGAGATCAAGCATTTCAGCAGGGTGTCATGGGGGAGAAACAGTTCCAGGAAGTaGCCAATAAACTCTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GNQAVLEIKHFSRVSWGRNSSRK*PINSLD Trigger: ATCAAGAGAGTTTATTGGCAACTTCCTGGAACTGTT...TCTCCCCCATGACACCCTGCTGAAATGCTTGATCTCAAGAACCGCCTGGTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | AACGCGAAGCTGCGTCTGAGGCAGGGTCCTGAAATGGGAAAGGGTTGGTGCATTCTTTCTTCCACATTCTaGACCTTTTCTTTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NAKLRLRQGPEMGKGWCILSSTF*TFSFIL Trigger: CAAGATGAAAGAAAAGGTCAAGAATGTGGAAGAAAG...AATGCACCAACCCTTTCCCATTTCAGGACCCTGCCTCAGACGCAGCTTCGCGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | GTAACCGCAGTATCTTGTAGCCTAGGTCATAGAATGGCTGAGTCTCCCCCACCCAACAGTTCCAGGAAGTaGCCAATAAACTCTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VTAVSCSLGHRMAESPPPNSSRK*PINSLD Trigger: ATCAAGAGAGTTTATTGGCAACTTCCTGGAACTGTT...GGGTGGGGGAGACTCAGCCATTCTATGACCTAGGCTACAAGATACTGCGGTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTTTTTTCATGAGGTGCTaGGCACTGGCAGCTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: AWKESRKYKSSHTHQLQCFFMRC*ALAAGF Trigger: GAATCCAGCTGCCAGTGCCAAGCACCTCATGAAAAA...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATTCTGAGGGAGGCTCATaGGAAAGGGATTTTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: LCVPLFINKLGILWSIGDSEGGS*ERDFGI Trigger: TATCCCAAAATCCCTTTCCAATGAGCCTCCCTCAGA...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR CAA 90 bp | GCCTGGAAGGAAAGTAGAAAATATAAATCCTCCCATACTCACCAACTCCAGTGTGATGCCTTCTGTTCTTaGTGTTGGAACAAACATGCC | + |
|
Preference number: 5 (lower is better) Translates to: AWKESRKYKSSHTHQLQCDAFCS*CWNKHA Trigger: GGCATGTTTGTTCCAACACAAAGAACAGAAGGCATC...ACACTGGAGTTGGTGAGTATGGGAGGATTTATATTTTCTACTTTCCTTCCAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | CTCTGCGTCCCTTTATTTATAAACAAGTTGGGAATACTGTGGTCCATTGGGGATGATGCCTTCTGTTCTTaGTGTTGGAACAAACATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LCVPLFINKLGILWSIGDDAFCS*CWNKHA Trigger: GGCATGTTTGTTCCAACACAAAGAACAGAAGGCATC...ATCCCCAATGGACCACAGTATTCCCAACTTGTTTATAAATAAAGGGACGCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | TGTCTGTTTGTACCTGGGATGATTCTGATGTTGGTCACTTCCCATCATTCACAGACCTTTTCTTTCATCTaGTCCACCTGGTTCTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CLFVPGMILMLVTSHHSQTFSFI*STWFWK Trigger: TTTCCAGAACCAGGTGGACAAGATGAAAGAAAAGGT...CTGTGAATGATGGGAAGTGACCAACATCAGAATCATCCCAGGTACAAACAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | TTGGTCACTTCCCATCATTCACAGCTACAGTGGCACTCTCTGATGAGTCACGTACTTTCTTCCACATTCTaGACCTTTTCTTTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTSHHSQLQWHSLMSHVLSSTF*TFSFIL Trigger: CAAGATGAAAGAAAAGGTCAAGAATGTGGAAGAAAG...TACGTGACTCATCAGAGAGTGCCACTGTAGCTGTGAATGATGGGAAGTGACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS-3UTR CAA 90 bp | GAAGAACAACAGGAATTTTCTGGGACAAAACATTTCTACCGGAATCTAACATTTCATTGGAAAGGGATTTaGGGATACCTGTTTCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: EEQQEFSGTKHFYRNLTFHWKGI*GYLFLT Trigger: AGTCAGAAACAGGTATCCCAAAATCCCTTTCCAATG...AAATGTTAGATTCCGGTAGAAATGTTTTGTCCCAGAAAATTCCTGTTGTTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS-3UTR CAA 90 bp | GAAGAACAACAGGAATTTTCTGGGACAAAACATTTCTACCGGAATCTAACATTTCTTCTGTTCTTTGTGTaGGAACAAACATGCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: EEQQEFSGTKHFYRNLTFLLFFV*EQTCLL Trigger: AAGCAGGCATGTTTGTTCCAACACAAAGAACAGAAG...AAATGTTAGATTCCGGTAGAAATGTTTTGTCCCAGAAAATTCCTGTTGTTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
||
| CDS CCA 72 bp | AGGTGCTTGGCACTGGCAGCTGGATTCATCAGCAAATaGGGCTGGTGCAGTCAGGGTCAGTCGAGGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RCLALAAGFISK*GWCSQGQSRLW Trigger: CCACAGCCTCGACTGACCCTGACTGCACCAGCCCCATTTGCTGATGAATCCAGCTGCCAGTGCCAAGCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
||
| CDS GCA 72 bp | GGGCTGCTCACAGGACTCTGCTTCGGAGATAATGCCTaGAGCATCCGGCTACTCCTCTCCTGGAACATCTGC | + |
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Preference number: 6 (lower is better) Translates to: GLLTGLCFGDNA*SIRLLLSWNIC Trigger: GCAGATGTTCCAGGAGAGGAGTAGCCGGATGCTGCAGGCATTATCTCCGAAGCAGAGTCCTGTGAGCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| CDS TCA 72 bp | GTTCCTAAGCGGGCCTGGGCAACGGTCAGTTTTTCATaGGGTGCTTGGCACTGGCAGCTGGATTCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VPKRAWATVSFS*GAWHWQLDSSA Trigger: TGCTGATGAATCCAGCTGCCAGTGCCAAGCACCTCATGAAAAACTGACCGTTGCCCAGGCCCGCTTAGGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| CDS CCA 72 bp | CGGTCAGTTTTTCATGAGGTGCTTGGCACTGGCAGCTaGATTCATCAGCAAATGGGGCTGGTGCAGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RSVFHEVLGTGS*IHQQMGLVQSG Trigger: CCCTGACTGCACCAGCCCCATTTGCTGATGAATCCAGCTGCCAGTGCCAAGCACCTCATGAAAAACTGACCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| CDS TCA 72 bp | CTGTGGGCATGTGTGCTCTATTTCCTCCATGGTTTCTaGGGGAGGCTCATTGGAAAGGGATTTTGGGATACC | + |
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Preference number: 6 (lower is better) Translates to: LWACVLYFLHGF*GRLIGKGFWDT Trigger: GGTATCCCAAAATCCCTTTCCAATGAGCCTCCCTCAGAAACCATGGAGGAAATAGAGCACACATGCCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
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| CDS CCA 72 bp | GCTCTATTTCCTCCATGGTTTCTGAGGGAGGCTCATTaGAAAGGGATTTTGGGATACCTGTTTCTGACTCAG | + |
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Preference number: 6 (lower is better) Translates to: ALFPPWFLREAH*KGILGYLFLTQ Trigger: CTGAGTCAGAAACAGGTATCCCAAAATCCCTTTCCAATGAGCCTCCCTCAGAAACCATGGAGGAAATAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045898.4 |
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| CDS CAA 72 bp | GATCTTTCTTCCACATTCTTGACCTTTTCTTTCATCTaGTCCACCTGGTTCTGGAAACGGTACTTCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: DLSSTFLTFSFI*STWFWKRYFFS Trigger: CGAGAAGAAGTACCGTTTCCAGAACCAGGTGGACAAGATGAAAGAAAAGGTCAAGAATGTGGAAGAAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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| CDS CAA 90 bp | AACTCCTTTGATCTTTCTTCCACATTCTTGACCTTTTCTTTCATCTaGTCCACCTGGTTCTGGAAACGGTACTTCTTCTCGTTTATAAAG | + |
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Preference number: 6 (lower is better) Translates to: NSFDLSSTFLTFSFI*STWFWKRYFFSFIK Trigger: CTTTATAAACGAGAAGAAGTACCGTTTCCAGAACCAGGTGGACAAGATGAAAGAAAAGGTCAAGAATGTGGAAGAAAGATCAAAGGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045898.4 ENSMUST00000113933.9 |
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