Pregenerated sensors for PCYOX1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024579Ensembl transcript IDs: ENSMUST00000025472.7, ENSMUST00000195229.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTACCAGTCGGTTTCCTCCAGCACGAAATGTTCGCCGCCAAAGATaGCGCTTCTGCCCACCACCTCGCGCCGCTGTCTCAGTCTGTGTA | + |
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Preference number: 1 (lower is better) Translates to: GTSRFPPARNVRRQR*RFCPPPRAAVSVCV Trigger: TACACAGACTGAGACAGCGGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTGGCGGCGAACATTTCGTGCTGGAGGAAACCGACTGGTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGCGGAAGAGATTCAGCAGGTACCAGTCGGTTTCCTCCAGCACGAAATGTTCCAAAGATGGCGCTTCTaGCCACCACCTCGCGCCGCT | + |
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Preference number: 2 (lower is better) Translates to: EAEEIQQVPVGFLQHEMFQRWRF*PPPRAA Trigger: AGCGGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTG...GAACATTTCGTGCTGGAGGAAACCGACTGGTACCTGCTGAATCTCTTCCGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCAGTTATCTTCAGTGTaGCGCAGAGTCCCTGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: SMRAEKATEPMGVASSVLQLSSV*RRVPGL Trigger: GAGCCCAGGGACTCTGCGCCACACTGAAGATAACTG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| 3UTR TCA 72 bp | TCGCCCGGGCCCACATGGGGGACCCTGTTCAATCCATaGGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: SPGPTWGTLFNP*EQRKPQSPWVW Trigger: CCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGATTGAACAGGGTCCCCCATGTGGGCCCGGGCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| 3UTR CCA 72 bp | CGGTTTCCTCCAGCACGAAATGTTCGCCGCCAAAGATaGCGCTTCTGCCCACCACCTCGCGCCGCTGTCTCA | + |
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Preference number: 3 (lower is better) Translates to: RFPPARNVRRQR*RFCPPPRAAVS Trigger: TGAGACAGCGGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTGGCGGCGAACATTTCGTGCTGGAGGAAACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| 3UTR GCA 72 bp | CCAGCACGAAATGTTCGCCGCCAAAGATGGCGCTTCTaGCCACCACCTCGCGCCGCTGTCTCAGTCTGTGTA | + |
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Preference number: 3 (lower is better) Translates to: PARNVRRQRWRF*PPPRAAVSVCV Trigger: TACACAGACTGAGACAGCGGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTGGCGGCGAACATTTCGTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| CDS-3UTR TCA 90 bp | CCAGCACGAAATGTTCGCCGCCAAAGATGGCGCTTCTGCCCACCACCTCGCGCCCTGCAGCGGCGGTGGTaGGGACTGTGGCCAGCACGG | + |
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Preference number: 4 (lower is better) Translates to: PARNVRRQRWRFCPPPRALQRRW*GLWPAR Trigger: CCGTGCTGGCCACAGTCCTCACCACCGCCGCTGCAG...GGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTGGCGGCGAACATTTCGTGCTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCTGCAGCGGCGGTGGTaGGGACTGTGGCCAGCACGG | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLLQRRW*GLWPAR Trigger: CCGTGCTGGCCACAGTCCTCACCACCGCCGCTGCAG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR GCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGGCGGCCTCCTGGGGTTaGTTCCGCCGGAAGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLAASWG*FRRKLA Trigger: GGCCAGCTTCCGGCGGAAGCAACCCCAGGAGGCCGC...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR GCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCGAACCTCGGGAGGGTaGGGCGGGAGCCGTAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLRTSGG*GGSRRG Trigger: CCCTCTACGGCTCCCGCCGCACCCTCCCGAGGTTCG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR GCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGGATTTTCCCCGGCGGTaGGTCTCCGCCTGCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLDFPRR*VSACSG Trigger: GCCGCTGCAGGCGGAGACGCACCGCCGGGGAAAATC...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | GTTCGCCGCCAAAGATGGCGCTTCTGCCCACCACCTCGCGCCGCTGTCTCAGTCGGTCCGAAGTGTTGCTaGAGGAAATGGGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VRRQRWRFCPPPRAAVSVGPKCC*RKWATA Trigger: TGCTGTGGCCCATTTCCTTCAGCAACACTTCGGACC...GACTGAGACAGCGGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTGGCGGCGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTGTGTGACGCCCACCTaGAGCAGGGACTCGGCCACG | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLCVTPT*SRDSAT Trigger: CGTGGCCGAGTCCCTGCTCCAGGTGGGCGTCACACA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR GCA 90 bp | GTACCAGTCGGTTTCCTCCAGCACGAAATGTTCGCCGCCAAAGATGGCGCTTCTGATTTTCCCCGGCGGTaGGTCTCCGCCTGCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: VPVGFLQHEMFAAKDGASDFPRR*VSACSG Trigger: GCCGCTGCAGGCGGAGACGCACCGCCGGGGAAAATC...AGAAGCGCCATCTTTGGCGGCGAACATTTCGTGCTGGAGGAAACCGACTGGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| CDS-3UTR GCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCAAAGATGGCGCTTCTaGCCACCACCTCGCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLQRWRF*PPPRAA Trigger: AGCGGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR GCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCTGCTGTTGTCCAGGTaGAGGGGCGTGGCGATGACC | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLLLLSR*RGVAMT Trigger: GGTCATCGCCACGCCCCTGCACCTGGACAACAGCAG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCCGACTGGCCATAGCTaGCCCGTAGGACCGCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLPTGHS*PVGPQR Trigger: TCTCTGCGGTCCTACGGGCCAGCTATGGCCAGTCGG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCCCCAGCTAGGGACATaGCTCCAGCAAAGGCGGGCA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLPQLGT*LQQRRA Trigger: TGCCCGCCTTTGCTGGAGCCATGTCCCTAGCTGGGG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCCAGGGAGACCACGGTaGGCTGGAAGGAGCCCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLPGRPR*AGRSPE Trigger: TTCAGGGCTCCTTCCAGCCCACCGTGGTCTCCCTGG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTCACCTCCACGGAGCTaGCCGCCCACTCCAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLSPPRS*PPTPRH Trigger: ATGCCTTGGAGTGGGCGGCCAGCTCCGTGGAGGTGA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGGCAGGGGCGTGGCGATaGCCACGATGTCGTAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLAGAWR*PRCRRS Trigger: ACTTCTACGACATCGTGGTCATCGCCACGCCCCTGC...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGGTTCGCCGCCAAAGATaGCGCTTCTGCCCACCACCT | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLVRRQR*RFCPPP Trigger: AGGTGGTGGGCAGAAGCGCCATCTTTGGCGGCGAAC...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTGGCGTGGATCACGGTaGCCTTGGCGAGCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLWRGSR*PWRASA Trigger: TGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTCACAGAGGTCACCGTaGCGTGGATCACGGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLSQRSP*RGSRWP Trigger: AGGCCACCGTGATCCACGCCACGGTGACCTCTGTGA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCGTAGTTCTGCTTGTTaGCGGAGATGGTGGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLRSSAC*RRWWPG Trigger: GCCTGGCCACCATCTCCGTCAACAAGCAGAACTACG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGGCAGCCTCAGGAAGCTaGTGCCGTAGTACCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLAASGS*CRSTTR Trigger: TCTGGTGGTACTACGGCATCAGCTTCCTGAGGCTGC...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGACCGCTGGGTCATGTTaGCAAAGGTGGCTTCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLTAGSC*QRWLPP Trigger: TGGGGGAAGCCACCTTTGTCAACATGACCCAGCGGT...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGAGCAAAGGCGGGCATTaGTGCCGACTGGCCATAGCT | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLSKGGH*CRLAIA Trigger: AGCTATGGCCAGTCGGCATCAATGCCCGCCTTTGCT...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTCGGCCACGGACCGCTaGGTCATGTTGACAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLSATDR*VMLTKV Trigger: CACCTTTGTCAACATGACCCAGCGGTCCGTGGCCGA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGGGATCACGGTGGCCTTaGCGAGCTTCAGCAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLGSRWP*RASANQ Trigger: CTGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCC...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGGGTCCGAAGTGTTGCTaGAGGAAATGGGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLGPKCC*RKWATA Trigger: TGCTGTGGCCCATTTCCTTCAGCAACACTTCGGACC...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTCAGTCCCAGCAGCTTaGCGAAGTCCTGCATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLSVPAA*RSPACG Trigger: TCCACATGCAGGACTTCGTCAAGCTGCTGGGACTGA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGAGCTGGCCGAGATGTTaGCGGGACAGATGTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLSWPRC*RDRCCP Trigger: TGGACAACATCTGTCCCGTCAACATCTCGGCCAGCT...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCTCCGCCGTCTGGACTaGGTAATAGGAACGGAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLLRRLD*VIGTEE Trigger: CTCTTCCGTTCCTATTACTCAGTCCAGACGGCGGAG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR TCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCCCACTCCAAGGCATTaGGGTAGAAGAGCTGATCGT | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLPTPRH*GRRADR Trigger: ACGATCAGCTCTTCTACCTCAATGCCTTGGAGTGGG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR GCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGAGCTTGACGAAGTCCTaGATGTGGAGGCTCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLSLTKS*MWRLRE Trigger: CTCTCTGAGCCTCCACATGCAGGACTTCGTCAAGCT...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR GCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTCCTCTACCCACATCTaGAGCCTCAGGAAGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLSSTHI*SLRKLM Trigger: CATCAGCTTCCTGAGGCTGCAGATGTGGGTAGAGGA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR GCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGAACAAACCAGCTTGTTaGCCCCTTCCACGGACCACA | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLNKPAC*PLPRTT Trigger: TGTGGTCCGTGGAAGGGGGCAACAAGCTGGTTTGTT...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCTCTCGTACGCCACTTaGTACAGGGCTTTCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLLSYAT*YRAFPS Trigger: AGAAGGGAAAGCCCTGTACCAAGTGGCGTACGAGAG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR GCA 90 bp | CAGCCTCAGGAAGCTGATGCCGTAGTACCACCAGAGGCGGAAGAGATTCAGCAGAGCTTGACGAAGTCCTaGATGTGGAGGCTCAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: QPQEADAVVPPEAEEIQQSLTKS*MWRLRE Trigger: CTCTCTGAGCCTCCACATGCAGGACTTCGTCAAGCT...CTGCTGAATCTCTTCCGCCTCTGGTGGTACTACGGCATCAGCTTCCTGAGGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| CDS-3UTR TCA 90 bp | GATTCAGCAGGTACCAGTCGGTTTCCTCCAGCACGAAATGTTCGCCGCCAAAGACTCCATCCAGCAGCTTaGCGAAGTCCTGCATGTGGA | + |
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Preference number: 4 (lower is better) Translates to: DSAGTSRFPPARNVRRQRLHPAA*RSPACG Trigger: TCCACATGCAGGACTTCGTCAAGCTGCTGGATGGAG...TCTTTGGCGGCGAACATTTCGTGCTGGAGGAAACCGACTGGTACCTGCTGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| CDS-3UTR GCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGAGATGTTGTCCAGAGTaGAGAAGAAGCTCGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLRCCPE*RRSSGS Trigger: ACTTCCCGAGCTTCTTCTGCACTCTGGACAACATCT...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTGGATTAGGTCCTTCTaGTCAATCTTATCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SMRAEKATEPMGVASSVLWIRSF*SILSRS Trigger: GGACCTGGATAAGATTGACCAGAAGGACCTAATCCA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS-3UTR CCA 90 bp | GAGGCGGAAGAGATTCAGCAGGTACCAGTCGGTTTCCTCCAGCACGAAATGTTCGTTCTTTCCCCTCTCTaGTCTCAGCTGCTCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: EAEEIQQVPVGFLQHEMFVLSPL*SQLLHP Trigger: TGGATGGAGCAGCTGAGACCAGAGAGGGGAAAGAAC...GAACATTTCGTGCTGGAGGAAACCGACTGGTACCTGCTGAATCTCTTCCGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
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| CDS CCA 90 bp | CGGAAGAGGGGCTTCGGGGACTGCACTCGCCACACGGCGGCCTCCTaGGGTTGCTTCCGCCGGAAGCTGGCCGAGATGTTGACGGGACAG | + |
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Preference number: 5 (lower is better) Translates to: RKRGFGDCTRHTAAS*GCFRRKLAEMLTGQ Trigger: CTGTCCCGTCAACATCTCGGCCAGCTTCCGGCGGAAGCAACCCCAGGAGGCCGCCGTGTGGCGAGTGCAGTCCCCGAAGCCCCTCTTCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS TCA 90 bp | GCGGGAGCCGTAGAGGGGGTGGGCCTGCCACTCCGCCGTCTGGACTaGGTAATAGGAACGGAAGAGGGTCTTCAGCTCCGTGCGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: AGAVEGVGLPLRRLD*VIGTEEGLQLRAEE Trigger: CTCTTCCGCACGGAGCTGAAGACCCTCTTCCGTTCCTATTACTCAGTCCAGACGGCGGAGTGGCAGGCCCACCCCCTCTACGGCTCCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS TCA 90 bp | CTACAGCCGTCACCTCCACGGAGCTGGCCGCCCACTCCAAGGCATTaGGGTAGAAGAGCTGATCGTGCAGGGCGAACCTCGGGAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQPSPPRSWPPTPRH*GRRADRAGRTSGGC Trigger: GCACCCTCCCGAGGTTCGCCCTGCACGATCAGCTCTTCTACCTCAATGCCTTGGAGTGGGCGGCCAGCTCCGTGGAGGTGACGGCTGTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 90 bp | CCCCTTCCACGGACCACAGGTTGCCCTGAGCCCCAGCTAGGGACATaGCTCCAGCAAAGGCGGGCATTGATGCCGACTGGCCATAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PLPRTTGCPEPQLGT*LQQRRALMPTGHSW Trigger: CCAGCTATGGCCAGTCGGCATCAATGCCCGCCTTTGCTGGAGCCATGTCCCTAGCTGGGGCTCAGGGCAACCTGTGGTCCGTGGAAGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS TCA 90 bp | CGCCCACCTGGAGCAGGGACTCGGCCACGGACCGCTGGGTCATGTTaGCAAAGGTGGCTTCCCCCAGTGAGTAGAGTAGCTCTTCTACCC | + |
|
Preference number: 5 (lower is better) Translates to: RPPGAGTRPRTAGSC*QRWLPPVSRVALLP Trigger: GGGTAGAAGAGCTACTCTACTCACTGGGGGAAGCCACCTTTGTCAACATGACCCAGCGGTCCGTGGCCGAGTCCCTGCTCCAGGTGGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS TCA 90 bp | CGGCGGCCTCCTGGGGTTGCTTCCGCCGGAAGCTGGCCGAGATGTTaGCGGGACAGATGTTGTCCAGAGTGCAGAAGAAGCTCGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRPPGVASAGSWPRC*RDRCCPECRRSSGS Trigger: ACTTCCCGAGCTTCTTCTGCACTCTGGACAACATCTGTCCCGTCAACATCTCGGCCAGCTTCCGGCGGAAGCAACCCCAGGAGGCCGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS GCA 90 bp | CGGTGGCCTTGGCGAGCTTCAGCAAACCAGAACAAACCAGCTTGTTaGCCCCTTCCACGGACCACAGGTTGCCCTGAGCCCCAGCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RWPWRASANQNKPAC*PLPRTTGCPEPQLG Trigger: CCCTAGCTGGGGCTCAGGGCAACCTGTGGTCCGTGGAAGGGGGCAACAAGCTGGTTTGTTCTGGTTTGCTGAAGCTCGCCAAGGCCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 90 bp | GGTACCAGTCGGTTTCCTCCAGCACGAAATGTTCGCCGCCAAAGATaGCGCTTCTGCCCACCACCTCGCGCCGCTGTCTCAGTCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTSRFPPARNVRRQR*RFCPPPRAAVSVPA Trigger: TGCTGGGACTGAGACAGCGGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTGGCGGCGAACATTTCGTGCTGGAGGAAACCGACTGGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | CCAGCACGAAATGTTCGCCGCCAAAGATGGCGCTTCTGCCCACCACCTCGCGCCGCTCCATCCAGCAGCTaGACGAAGTCCTGCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PARNVRRQRWRFCPPPRAAPSSS*TKSCMW Trigger: CCACATGCAGGACTTCGTCAAGCTGCTGGATGGAGC...GGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTGGCGGCGAACATTTCGTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGGACCGCTGGGTCATGTaGACAAAGGTGGCTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLDRWVM*TKVASP Trigger: GGGGGAAGCCACCTTTGTCAACATGACCCAGCGGTC...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCAGCAAAGGCGGGCATaGATGCCGACTGGCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLQQRRA*MPTGHS Trigger: GCTATGGCCAGTCGGCATCAATGCCCGCCTTTGCTG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 90 bp | ACCGCAGAGACGACATCATCAATAAAGCGCTGTGTGACGCCCACCTaGAGCAGGGACTCGGCCACGGACCGCTGGGTCATGTTGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TAETTSSIKRCVTPT*SRDSATDRWVMLTK Trigger: CTTTGTCAACATGACCCAGCGGTCCGTGGCCGAGTCCCTGCTCCAGGTGGGCGTCACACAGCGCTTTATTGATGATGTCGTCTCTGCGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 90 bp | TGTGCAGGGTCACAGAGGTCACCGTGGCGTGGATCACGGTGGCCTTaGCGAGCTTCAGCAAACCAGAACAAACCAGCTTGTTGCCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: CAGSQRSPWRGSRWP*RASANQNKPACCPL Trigger: AAGGGGGCAACAAGCTGGTTTGTTCTGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGACCCTGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 90 bp | ACAGGGCTTTCCCTTCTGTACTGTGCAGGGTCACAGAGGTCACCGTaGCGTGGATCACGGTGGCCTTGGCGAGCTTCAGCAAACCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TGLSLLYCAGSQRSP*RGSRWPWRASANQN Trigger: GTTCTGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGACCCTGCACAGTACAGAAGGGAAAGCCCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTCGGGGTCCGAAGTGTaGCTGAAGGAAATGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLSGSEV*LKEMGH Trigger: GTGGCCCATTTCCTTCAGCAACACTTCGGACCCCGA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCTCAGTCCCAGCAGCTaGACGAAGTCCTGCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLLSPSS*TKSCMW Trigger: CCACATGCAGGACTTCGTCAAGCTGCTGGGACTGAG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGGAACAAACCAGCTTGTaGCCCCCTTCCACGGACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLEQTSL*PPSTDH Trigger: GTGGTCCGTGGAAGGGGGCAACAAGCTGGTTTGTTC...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCCAGAACAAACCAGCTaGTTGCCCCCTTCCACGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLPEQTS*LPPSTD Trigger: GTCCGTGGAAGGGGGCAACAAGCTGGTTTGTTCTGG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTGGATCACGGTGGCCTaGGCGAGCTTCAGCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLWITVA*ASFSKP Trigger: TGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTTGTTGTTGCTGCTGTaGTCCAGGTGCAGGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLLLLLL*SRCRGV Trigger: CACGCCCCTGCACCTGGACAACAGCAGCAACAACAA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 90 bp | CTGTACTGTGCAGGGTCACAGAGGTCACCGTGGCGTGGATCACGGTaGCCTTGGCGAGCTTCAGCAAACCAGAACAAACCAGCTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LYCAGSQRSPWRGSR*PWRASANQNKPACC Trigger: GCAACAAGCTGGTTTGTTCTGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGACCCTGCACAGTACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 90 bp | GCTTTCCCTTCTGTACTGTGCAGGGTCACAGAGGTCACCGTGGCGTaGATCACGGTGGCCTTGGCGAGCTTCAGCAAACCAGAACAAACC | + |
|
Preference number: 5 (lower is better) Translates to: AFPSVLCRVTEVTVA*ITVALASFSKPEQT Trigger: GGTTTGTTCTGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGACCCTGCACAGTACAGAAGGGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGACTCTCGTACGCCACTaGGTACAGGGCTTTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLTLVRH*VQGFPF Trigger: GAAGGGAAAGCCCTGTACCAAGTGGCGTACGAGAGT...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTCAGAGCTGTTGCCCTaGTCACTCTCGTACGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLSELLP*SLSYAT Trigger: AGTGGCGTACGAGAGTGACAAGGGCAACAGCTCTGA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGAAGCTGGCCGAGATGTaGACGGGACAGATGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLKLAEM*TGQMLS Trigger: GGACAACATCTGTCCCGTCAACATCTCGGCCAGCTT...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | CCTCAGGAAGCTGATGCCGTAGTACCACCAGAGGCGGAAGAGATTCAGCAGGTATCGGGGTCCGAAGTGTaGCTGAAGGAAATGGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PQEADAVVPPEAEEIQQVSGSEV*LKEMGH Trigger: GTGGCCCATTTCCTTCAGCAACACTTCGGACCCCGA...TACCTGCTGAATCTCTTCCGCCTCTGGTGGTACTACGGCATCAGCTTCCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGCTCATAGACGACAATTaGCACTCGGGGTCCGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLLIDDN*HSGSEV Trigger: CACTTCGGACCCCGAGTGCAAATTGTCGTCTATGAG...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGAAGGTGATGTTGTTGTaGCTGCTGTTGTCCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLKVMLL*LLLSRC Trigger: GCACCTGGACAACAGCAGCAACAACAACATCACCTT...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTTGACGGGACAGATGTaGTCCAGAGTGCAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLLTGQM*SRVQKK Trigger: CTTCTTCTGCACTCTGGACAACATCTGTCCCGTCAA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS-3UTR CAA 90 bp | CACCAGAGGCGGAAGAGATTCAGCAGGTACCAGTCGGTTTCCTCCAGCACGAAACTCATAGACGACAATTaGCACTCGGGGTCCGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HQRRKRFSRYQSVSSSTKLIDDN*HSGSEV Trigger: CACTTCGGACCCCGAGTGCAAATTGTCGTCTATGAG...TTTCGTGCTGGAGGAAACCGACTGGTACCTGCTGAATCTCTTCCGCCTCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195229.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGAGAGCAGAGAAAGCCACAGAGCCCATGGGTGTGGCCTCGTCAGTCCTGTCAAAGGTGATGTTGTaGTTGCTGCTGTTGTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SMRAEKATEPMGVASSVLSKVML*LLLLSR Trigger: CCTGGACAACAGCAGCAACAACAACATCACCTTTGA...CAGGACTGACGAGGCCACACCCATGGGCTCTGTGGCTTTCTCTGCTCTCATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS TCA 72 bp | TCCCCGGCGGTGCGTCTCCGCCTGCAGCGGCGGTGGTaGGGACTGTGGCCAGCACGGCGAGCAGCGGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPAVRLRLQRRW*GLWPARRAAGQ Trigger: CTGCCCCGCTGCTCGCCGTGCTGGCCACAGTCCTCACCACCGCCGCTGCAGGCGGAGACGCACCGCCGGGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025472.7 ENSMUST00000195229.2 |
||
| CDS GCA 72 bp | AGAAGAGCTGATCGTGCAGGGCGAACCTCGGGAGGGTaGGGCGGGAGCCGTAGAGGGGGTGGGCCTGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: RRADRAGRTSGG*GGSRRGGGPAT Trigger: AGTGGCAGGCCCACCCCCTCTACGGCTCCCGCCGCACCCTCCCGAGGTTCGCCCTGCACGATCAGCTCTTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 72 bp | GGCTTCGGGGACTGCACTCGCCACACGGCGGCCTCCTaGGGTTGCTTCCGCCGGAAGCTGGCCGAGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GFGDCTRHTAAS*GCFRRKLAEML Trigger: CAACATCTCGGCCAGCTTCCGGCGGAAGCAACCCCAGGAGGCCGCCGTGTGGCGAGTGCAGTCCCCGAAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 72 bp | CGGACCACAGGTTGCCCTGAGCCCCAGCTAGGGACATaGCTCCAGCAAAGGCGGGCATTGATGCCGACTGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTTGCPEPQLGT*LQQRRALMPTG Trigger: GCCAGTCGGCATCAATGCCCGCCTTTGCTGGAGCCATGTCCCTAGCTGGGGCTCAGGGCAACCTGTGGTCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS TCA 72 bp | AGCTTGTTGCCCCCTTCCACGGACCACAGGTTGCCCTaGGCCCCAGCTAGGGACATGGCTCCAGCAAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SLLPPSTDHRLP*APARDMAPAKA Trigger: CGCCTTTGCTGGAGCCATGTCCCTAGCTGGGGCTCAGGGCAACCTGTGGTCCGTGGAAGGGGGCAACAAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS GCA 72 bp | CCAGCACGAAATGTTCGCCGCCAAAGATGGCGCTTCTaGCCACCACCTCGCGCCGCTGTCTCAGTCCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PARNVRRQRWRF*PPPRAAVSVPA Trigger: TGCTGGGACTGAGACAGCGGCGCGAGGTGGTGGGCAGAAGCGCCATCTTTGGCGGCGAACATTTCGTGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CAA 90 bp | ACGGCGGCCTCCTGGGGTTGCTTCCGCCGGAAGCTGGCCGAGATGTaGACGGGACAGATGTTGTCCAGAGTGCAGAAGAAGCTCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TAASWGCFRRKLAEM*TGQMLSRVQKKLGK Trigger: CTTCCCGAGCTTCTTCTGCACTCTGGACAACATCTGTCCCGTCAACATCTCGGCCAGCTTCCGGCGGAAGCAACCCCAGGAGGCCGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS TCA 72 bp | TCACCTCCACGGAGCTGGCCGCCCACTCCAAGGCATTaGGGTAGAAGAGCTGATCGTGCAGGGCGAACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: SPPRSWPPTPRH*GRRADRAGRTS Trigger: CGAGGTTCGCCCTGCACGATCAGCTCTTCTACCTCAATGCCTTGGAGTGGGCGGCCAGCTCCGTGGAGGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS TCA 72 bp | GGAGCAGGGACTCGGCCACGGACCGCTGGGTCATGTTaGCAAAGGTGGCTTCCCCCAGTGAGTAGAGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GAGTRPRTAGSC*QRWLPPVSRVA Trigger: AGCTACTCTACTCACTGGGGGAAGCCACCTTTGTCAACATGACCCAGCGGTCCGTGGCCGAGTCCCTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS TCA 72 bp | GTAGAGGGGGTGGGCCTGCCACTCCGCCGTCTGGACTaGGTAATAGGAACGGAAGAGGGTCTTCAGCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: VEGVGLPLRRLD*VIGTEEGLQLR Trigger: ACGGAGCTGAAGACCCTCTTCCGTTCCTATTACTCAGTCCAGACGGCGGAGTGGCAGGCCCACCCCCTCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS GCA 72 bp | AAACCAGCTTGTTGCCCCCTTCCACGGACCACAGGTTaGCCTGAGCCCCAGCTAGGGACATGGCTCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: KPACCPLPRTTG*PEPQLGTWLQQ Trigger: TTGCTGGAGCCATGTCCCTAGCTGGGGCTCAGGGCAACCTGTGGTCCGTGGAAGGGGGCAACAAGCTGGTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 72 bp | ACGACATCATCAATAAAGCGCTGTGTGACGCCCACCTaGAGCAGGGACTCGGCCACGGACCGCTGGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: TTSSIKRCVTPT*SRDSATDRWVM Trigger: CATGACCCAGCGGTCCGTGGCCGAGTCCCTGCTCCAGGTGGGCGTCACACAGCGCTTTATTGATGATGTCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 72 bp | TCCCTTCTGTACTGTGCAGGGTCACAGAGGTCACCGTaGCGTGGATCACGGTGGCCTTGGCGAGCTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLLYCAGSQRSP*RGSRWPWRASA Trigger: TGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGACCCTGCACAGTACAGAAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CAA 90 bp | CTGTGCAGGGTCACAGAGGTCACCGTGGCGTGGATCACGGTGGCCTaGGCGAGCTTCAGCAAACCAGAACAAACCAGCTTGTTGCCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LCRVTEVTVAWITVA*ASFSKPEQTSLLPP Trigger: AGGGGGCAACAAGCTGGTTTGTTCTGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGACCCTGCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS TCA 72 bp | CCTGGGGTTGCTTCCGCCGGAAGCTGGCCGAGATGTTaGCGGGACAGATGTTGTCCAGAGTGCAGAAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGVASAGSWPRC*RDRCCPECRRS Trigger: GCTTCTTCTGCACTCTGGACAACATCTGTCCCGTCAACATCTCGGCCAGCTTCCGGCGGAAGCAACCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS GCA 72 bp | TGGCGAGCTTCAGCAAACCAGAACAAACCAGCTTGTTaGCCCCTTCCACGGACCACAGGTTGCCCTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: WRASANQNKPAC*PLPRTTGCPEP Trigger: GGGCTCAGGGCAACCTGTGGTCCGTGGAAGGGGGCAACAAGCTGGTTTGTTCTGGTTTGCTGAAGCTCGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS GCA 72 bp | CTGAGTAATAGGAACGGAAGAGGGTCTTCAGCTCCGTaGGGAAGAGGGGCTTCGGGGACTGCACTCGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LSNRNGRGSSAP*GRGASGTALAT Trigger: TGTGGCGAGTGCAGTCCCCGAAGCCCCTCTTCCGCACGGAGCTGAAGACCCTCTTCCGTTCCTATTACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 72 bp | GCAGGGTCACAGAGGTCACCGTGGCGTGGATCACGGTaGCCTTGGCGAGCTTCAGCAAACCAGAACAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: AGSQRSPWRGSR*PWRASANQNKP Trigger: TGGTTTGTTCTGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGACCCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
||
| CDS CCA 72 bp | TCTGTACTGTGCAGGGTCACAGAGGTCACCGTGGCGTaGATCACGGTGGCCTTGGCGAGCTTCAGCAAACCA | + |
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Preference number: 6 (lower is better) Translates to: SVLCRVTEVTVA*ITVALASFSKP Trigger: TGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGACCCTGCACAGTACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CAA 72 bp | CGCCGGAAGCTGGCCGAGATGTTGACGGGACAGATGTaGTCCAGAGTGCAGAAGAAGCTCGGGAAGTCCGTG | + |
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Preference number: 6 (lower is better) Translates to: RRKLAEMLTGQM*SRVQKKLGKSV Trigger: CACGGACTTCCCGAGCTTCTTCTGCACTCTGGACAACATCTGTCCCGTCAACATCTCGGCCAGCTTCCGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CAA 90 bp | GGTTGCTTCCGCCGGAAGCTGGCCGAGATGTTGACGGGACAGATGTaGTCCAGAGTGCAGAAGAAGCTCGGGAAGTCCGTGGTGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: GCFRRKLAEMLTGQM*SRVQKKLGKSVVRM Trigger: CATCCTCACCACGGACTTCCCGAGCTTCTTCTGCACTCTGGACAACATCTGTCCCGTCAACATCTCGGCCAGCTTCCGGCGGAAGCAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CAA 72 bp | GTCACAGAGGTCACCGTGGCGTGGATCACGGTGGCCTaGGCGAGCTTCAGCAAACCAGAACAAACCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: VTEVTVAWITVA*ASFSKPEQTSL Trigger: CAAGCTGGTTTGTTCTGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CAA 72 bp | TCCTGGGGTTGCTTCCGCCGGAAGCTGGCCGAGATGTaGACGGGACAGATGTTGTCCAGAGTGCAGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: SWGCFRRKLAEM*TGQMLSRVQKK Trigger: CTTCTTCTGCACTCTGGACAACATCTGTCCCGTCAACATCTCGGCCAGCTTCCGGCGGAAGCAACCCCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CAA 90 bp | AGTCCCTTTCTCATAGACGACAATTTGCACTCGGGGTCCGAAGTGTaGCTGAAGGAAATGGGCCACAGCAGAGCCCCCGATCCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SPFLIDDNLHSGSEV*LKEMGHSRAPDPSS Trigger: GGAGCTGGGATCGGGGGCTCTGCTGTGGCCCATTTCCTTCAGCAACACTTCGGACCCCGAGTGCAAATTGTCGTCTATGAGAAAGGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025472.7 ENSMUST00000195229.2 |
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| CDS CCA 72 bp | TCACAGAGGTCACCGTGGCGTGGATCACGGTGGCCTTaGCGAGCTTCAGCAAACCAGAACAAACCAGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SQRSPWRGSRWP*RASANQNKPAC Trigger: ACAAGCTGGTTTGTTCTGGTTTGCTGAAGCTCGCCAAGGCCACCGTGATCCACGCCACGGTGACCTCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CCA 72 bp | TCAGAGCTGTTGCCCTTGTCACTCTCGTACGCCACTTaGTACAGGGCTTTCCCTTCTGTACTGTGCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: SELLPLSLSYAT*YRAFPSVLCRV Trigger: GACCCTGCACAGTACAGAAGGGAAAGCCCTGTACCAAGTGGCGTACGAGAGTGACAAGGGCAACAGCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CAA 72 bp | CTCATAGACGACAATTTGCACTCGGGGTCCGAAGTGTaGCTGAAGGAAATGGGCCACAGCAGAGCCCCCGAT | + |
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Preference number: 6 (lower is better) Translates to: LIDDNLHSGSEV*LKEMGHSRAPD Trigger: ATCGGGGGCTCTGCTGTGGCCCATTTCCTTCAGCAACACTTCGGACCCCGAGTGCAAATTGTCGTCTATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025472.7 ENSMUST00000195229.2 |
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| CDS CAA 72 bp | GTCAGAGCTGTTGCCCTTGTCACTCTCGTACGCCACTaGGTACAGGGCTTTCCCTTCTGTACTGTGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: VRAVALVTLVRH*VQGFPFCTVQG Trigger: ACCCTGCACAGTACAGAAGGGAAAGCCCTGTACCAAGTGGCGTACGAGAGTGACAAGGGCAACAGCTCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CAA 72 bp | ATGGGCGGAGTAAAGCCTTCAAAGGTGATGTTGTTGTaGCTGCTGTTGTCCAGGTGCAGGGGCGTGGCGATG | + |
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Preference number: 6 (lower is better) Translates to: MGGVKPSKVMLL*LLLSRCRGVAM Trigger: CATCGCCACGCCCCTGCACCTGGACAACAGCAGCAACAACAACATCACCTTTGAAGGCTTTACTCCGCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CAA 90 bp | GTCGTAGAAGTCAGAGCTGTTGCCCTTGTCACTCTCGTACGCCACTaGGTACAGGGCTTTCCCTTCTGTACTGTGCAGGGTCACAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: VVEVRAVALVTLVRH*VQGFPFCTVQGHRG Trigger: ACCTCTGTGACCCTGCACAGTACAGAAGGGAAAGCCCTGTACCAAGTGGCGTACGAGAGTGACAAGGGCAACAGCTCTGACTTCTACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CAA 90 bp | ATGTCCTCAATGGGCGGAGTAAAGCCTTCAAAGGTGATGTTGTTGTaGCTGCTGTTGTCCAGGTGCAGGGGCGTGGCGATGACCACGATG | + |
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Preference number: 6 (lower is better) Translates to: MSSMGGVKPSKVMLL*LLLSRCRGVAMTTM Trigger: CATCGTGGTCATCGCCACGCCCCTGCACCTGGACAACAGCAGCAACAACAACATCACCTTTGAAGGCTTTACTCCGCCCATTGAGGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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| CDS CCA 72 bp | CACAGTTCAGTCTTGACCTTATGGATTAGGTCCTTCTaGTCAATCTTATCCAGGTCCTGGTACCAGCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: HSSVLTLWIRSF*SILSRSWYQRL Trigger: TAACCGCTGGTACCAGGACCTGGATAAGATTGACCAGAAGGACCTAATCCATAAGGTCAAGACTGAACTGTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025472.7 |
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