Pregenerated sensors for PCYOX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029998Ensembl transcript IDs: ENSMUST00000032065.15, ENSMUST00000131500.2, ENSMUST00000153723.3, ENSMUST00000204116.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTCATGTGGAGGGCCTGGAATCAAATCCCAGGCTCTCCGGAGACTaGGGCAGGAGGATTCCACCTGGACAACTTAGTGAGACCCAGTCT | + |
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Preference number: 1 (lower is better) Translates to: PHVEGLESNPRLSGD*GRRIPPGQLSETQS Trigger: AGACTGGGTCTCACTAAGTTGTCCAGGTGGAATCCTCCTGCCTCAGTCTCCGGAGAGCCTGGGATTTGATTCCAGGCCCTCCACATGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CCA 90 bp | TCCAATGTTTCCCCAGTTATCCAGCCACGCCTCATGTGGAGGGCCTaGAATCAAATCCCAGGCTCTCCGGAGACTGAGGCAGGAGGATTC | + |
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Preference number: 1 (lower is better) Translates to: SNVSPVIQPRLMWRA*NQIPGSPETEAGGF Trigger: GAATCCTCCTGCCTCAGTCTCCGGAGAGCCTGGGATTTGATTCCAGGCCCTCCACATGAGGCGTGGCTGGATAACTGGGGAAACATTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR GCA 90 bp | ACAACTGAGCGCCACTGTATTAAGATTTCAGCAACGGCCCCTCACTaGGCATGCCCAGCATCTGATACGCGTCCCTCTGAACTCACGCAG | + |
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Preference number: 1 (lower is better) Translates to: TTERHCIKISATAPH*ACPASDTRPSELTQ Trigger: CTGCGTGAGTTCAGAGGGACGCGTATCAGATGCTGGGCATGCGCAGTGAGGGGCCGTTGCTGAAATCTTAATACAGTGGCGCTCAGTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CCA 90 bp | CTGGGAAAATCCAATGTTTCCCCAGTTATCCAGCCACGCCTCATGTaGAGGGCCTGGAATCAAATCCCAGGCTCTCCGGAGACTGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LGKSNVSPVIQPRLM*RAWNQIPGSPETEA Trigger: TGCCTCAGTCTCCGGAGAGCCTGGGATTTGATTCCAGGCCCTCCACATGAGGCGTGGCTGGATAACTGGGGAAACATTGGATTTTCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 90 bp | GACCAGGCTGGCCTTGCACTCACAAAGATCCACCTGCCTCTATATTaGACTCAGGAGATTTGTCTGCCTCTGTCTCCCAAGCCCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: DQAGLALTKIHLPLY*TQEICLPLSPKPWD Trigger: ATCCCAGGGCTTGGGAGACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGAGTGCAAGGCCAGCCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR GCA 90 bp | AAAGCTCTCTATCTGACACCCAGGACCTGCTCACCCTTGGCTGCATaGGAGGAACTTGATCTTGACAAAGCTTTAGAGCCAAGACCCCAT | + |
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Preference number: 1 (lower is better) Translates to: KALYLTPRTCSPLAA*EELDLDKALEPRPH Trigger: ATGGGGTCTTGGCTCTAAAGCTTTGTCAAGATCAAGTTCCTCGCATGCAGCCAAGGGTGAGCAGGTCCTGGGTGTCAGATAGAGAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR GCA 90 bp | GGAAACATCTGTATTCCAGCACATAGGAGGCTGAGACAGGAGGATTaGTGTGATTTCAAGACCAGCCTGGGCTGCATAATGAGTTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: GNICIPAHRRLRQED*CDFKTSLGCIMSSS Trigger: GCTGGAACTCATTATGCAGCCCAGGCTGGTCTTGAAATCACAGCAATCCTCCTGTCTCAGCCTCCTATGTGCTGGAATACAGATGTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR GCA 90 bp | TCACAAAGATCCACCTGCCTCTATATTGAACTCAGGAGATTTGTCTaGCTCTGTCTCCCAAGCCCTGGGATTAAAGGCATGTGCCACCAC | + |
|
Preference number: 1 (lower is better) Translates to: SQRSTCLYIELRRFV*LCLPSPGIKGMCHH Trigger: GTGGTGGCACATGCCTTTAATCCCAGGGCTTGGGAGACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR GCA 90 bp | CGCGTCCCTCTGAACTCACGCAGCCATGAAGACCTGGTTCTAAGGCCAACTGCTCAAGAGGGGAACACTTaGCCAGCATGCACGGGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RVPLNSRSHEDLVLRPTAQEGNT*PACTGP Trigger: AGGCCCCGTGCATGCTGGGCAAGTGTTCCCCTCTTG...AGCAGTTGGCCTTAGAACCAGGTCTTCATGGCTGCGTGAGTTCAGAGGGACGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CAA 90 bp | AGACCAGGCTGGCCTTGCACTCACAAAGATCCACCTGCCTCTATATaGAACTCAGGAGATTTGTCTGCCTCTGTCTCCCAAGCCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: RPGWPCTHKDPPASI*NSGDLSASVSQALG Trigger: TCCCAGGGCTTGGGAGACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGAGTGCAAGGCCAGCCTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR TCA 90 bp | CGCGTCCCTCTGAACTCACGCAGCCATGAAGACCTGGTTCTAAGGCCAACTGCTGGTCTGCTGTGGTTTTaGTTTGTGTTGCTTAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: RVPLNSRSHEDLVLRPTAGLLWF*FVLLST Trigger: AGTGCTAAGCAACACAAATCAAAACCACAGCAGACC...AGCAGTTGGCCTTAGAACCAGGTCTTCATGGCTGCGTGAGTTCAGAGGGACGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR TCA 90 bp | CATGTGGGGCTCACTGCTTCCCAGTTCCGGGTGCCCACTAGGGGTCATGAAACATTGATTTTTATTCCTTaGGATAGGGTGTTGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: HVGLTASQFRVPTRGHETLIFIP*DRVLPQ Trigger: CTGTGGCAACACCCTATCTCAAGGAATAAAAATCAA...TGTTTCATGACCCCTAGTGGGCACCCGGAACTGGGAAGCAGTGAGCCCCACATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CAA 90 bp | TGCACTCACAAAGATCCACCTGCCTCTATATTGAACTCAGGAGATTaGTCTGCCTCTGTCTCCCAAGCCCTGGGATTAAAGGCATGTGCC | + |
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Preference number: 2 (lower is better) Translates to: CTHKDPPASILNSGD*SASVSQALGLKACA Trigger: GGCACATGCCTTTAATCCCAGGGCTTGGGAGACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGAGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR TCA 90 bp | AATACTCAGTGGAAAATACCAGAAAGAGCTGGTGGATGTGAAGGCACACACCTTCAAATTCCTCTCTGCTaGCTCGGTCCTTCGAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: NTQWKIPERAGGCEGTHLQIPLC*LGPSRA Trigger: TGCTCTCGAAGGACCGAGTCAGCAGAGAGGAATTTG...AAGGTGTGTGCCTTCACATCCACCAGCTCTTTCTGGTATTTTCCACTGAGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR CCA 90 bp | TGTATTAAGATTTCAGCAACGGCCCCTCACTGCGCATGCCCAGCATCTGATACGAAAACCAGACAAGCCTaGGAAAATCCAATGTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: CIKISATAPHCACPASDTKTRQA*ENPMFP Trigger: GGGAAACATTGGATTTTCCCAGGCTTGTCTGGTTTT...CGTATCAGATGCTGGGCATGCGCAGTGAGGGGCCGTTGCTGAAATCTTAATACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR GCA 90 bp | AATACTCAGTGGAAAATACCAGAAAGAGCTGGTGGATGTGAAGGCACACACCTTCCTCTGGCACCGGTCTaGTGTGGTTTTGATTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: NTQWKIPERAGGCEGTHLPLAPV*CGFDLC Trigger: ACACAAATCAAAACCACAGCAGACCGGTGCCAGAGG...AAGGTGTGTGCCTTCACATCCACCAGCTCTTTCTGGTATTTTCCACTGAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR TCA 90 bp | CTTAATACTAGTGGCTATGATAGTCACTGGAGACCTATGAGCAGTGGACTAAACCCCACACCAGCCCAATaGCCTAACCCAGATGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: LNTSGYDSHWRPMSSGLNPTPAQ*PNPDVY Trigger: ATAAACATCTGGGTTAGGTCATTGGGCTGGTGTGGG...GTTTAGTCCACTGCTCATAGGTCTCCAGTGACTATCATAGCCACTAGTATTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR GCA 90 bp | TCACAAAGATCCACCTGCCTCTATATTGAACTCAGGAGATTTGTCTGCCTCTGTCTGAGACAGGAGGATTaGTGTGATTTCAAGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: SQRSTCLYIELRRFVCLCLRQED*CDFKTS Trigger: GCTGGTCTTGAAATCACAGCAATCCTCCTGTCTCAG...ACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR TCA 90 bp | TCACAAAGATCCACCTGCCTCTATATTGAACTCAGGAGATTTGTCTGCCTCTGTAGAGTGATGACATTCTaGCAGAAGAACACATTCTCC | + |
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Preference number: 2 (lower is better) Translates to: SQRSTCLYIELRRFVCLCRVMTF*QKNTFS Trigger: GGAGAATGTGTTCTTCTGTCAGAATGTCATCACTCT...ACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR GCA 90 bp | TCACAAAGATCCACCTGCCTCTATATTGAACTCAGGAGATTTGTCTGCCTCTGTGGTTTTGATTTGTGTTaGTTAGCACTTTTAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SQRSTCLYIELRRFVCLCGFDLC*LALLRH Trigger: GTGCCTTAAAAGTGCTAAGCAACACAAATCAAAACC...ACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR GCA 90 bp | TATATATTTGGTTCCAAATCACAGGCTATCTCTGCTTCTATCTCTGAATCTATCCAAAAGAGTATAAACTaGCAGGAACTGGGAAACATC | + |
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Preference number: 2 (lower is better) Translates to: YIFGSKSQAISASISESIQKSIN*QELGNI Trigger: GATGTTTCCCAGTTCCTGGCAGTTTATACTCTTTTG...GATAGATTCAGAGATAGAAGCAGAGATAGCCTGTGATTTGGAACCAAATATATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR GCA 90 bp | AATTACAAGCCTAAGTATATCCCATTGCAAATCAAGTCCACAAACGGTAGAAACCAAATATATCACCGCTaGTTTCTCCACACATTATTA | + |
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Preference number: 2 (lower is better) Translates to: NYKPKYIPLQIKSTNGRNQIYHR*FLHTLL Trigger: TAATAATGTGTGGAGAAAGCAGCGGTGATATATTTG...GTTTCTACCGTTTGTGGACTTGATTTGCAATGGGATATACTTAGGCTTGTAATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | CGGGTGCCCACTAGGGGTCATGAAACACTCCCGCTCTaGGGAGGCGCGCTGCACAAATCCACCGTACGAATC | + |
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Preference number: 3 (lower is better) Translates to: RVPTRGHETLPL*GGALHKSTVRI Trigger: GATTCGTACGGTGGATTTGTGCAGCGCGCCTCCTCAGAGCGGGAGTGTTTCATGACCCCTAGTGGGCACCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | TGCCAGGACCCAGGAGGCAGAAGCAGGCTGTCTGTATaGCTTGAGGCCAGCCAACGCTACATAGTGAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: CQDPGGRSRLSV*LEASQRYIVRP Trigger: GGGCCTCACTATGTAGCGTTGGCTGGCCTCAAGTCATACAGACAGCCTGCTTCTGCCTCCTGGGTCCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CCA 72 bp | TCCCCAGTTATCCAGCCACGCCTCATGTGGAGGGCCTaGAATCAAATCCCAGGCTCTCCGGAGACTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: SPVIQPRLMWRA*NQIPGSPETEA Trigger: TGCCTCAGTCTCCGGAGAGCCTGGGATTTGATTCCAGGCCCTCCACATGAGGCGTGGCTGGATAACTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR CAA 90 bp | AGCGCCACTGTATTAAGATTTCAGCAACGGCCCCTCACTGCGCATGCCCAGCATTCAAGAGGGGAACACTaGCCCAGCATGCACGGGGCC | + |
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Preference number: 3 (lower is better) Translates to: SATVLRFQQRPLTAHAQHSRGEH*PSMHGA Trigger: GGCCCCGTGCATGCTGGGCAAGTGTTCCCCTCTTGA...ATGCTGGGCATGCGCAGTGAGGGGCCGTTGCTGAAATCTTAATACAGTGGCGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | GGACCCAGGAGGCAGAAGCAGGCTGTCTGTATGACTTaGGGCCAGCCAACGCTACATAGTGAGGCCCTGTCT | + |
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Preference number: 3 (lower is better) Translates to: GPRRQKQAVCMT*GQPTLHSEALS Trigger: AGACAGGGCCTCACTATGTAGCGTTGGCTGGCCTCAAGTCATACAGACAGCCTGCTTCTGCCTCCTGGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | GAGGGCCTGGAATCAAATCCCAGGCTCTCCGGAGACTaGGGCAGGAGGATTCCACCTGGACAACTTAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: EGLESNPRLSGD*GRRIPPGQLSE Trigger: CTCACTAAGTTGTCCAGGTGGAATCCTCCTGCCTCAGTCTCCGGAGAGCCTGGGATTTGATTCCAGGCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | GCATCTGATACGCGTCCCTCTGAACTCACGCAGCCATaGAGACCTGGTTCTAAGGCCAACTGCTCTGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: ASDTRPSELTQP*RPGSKANCSGL Trigger: GAGCCCAGAGCAGTTGGCCTTAGAACCAGGTCTTCATGGCTGCGTGAGTTCAGAGGGACGCGTATCAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CCA 72 bp | TCCAATGTTTCCCCAGTTATCCAGCCACGCCTCATGTaGAGGGCCTGGAATCAAATCCCAGGCTCTCCGGAG | + |
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Preference number: 3 (lower is better) Translates to: SNVSPVIQPRLM*RAWNQIPGSPE Trigger: CTCCGGAGAGCCTGGGATTTGATTCCAGGCCCTCCACATGAGGCGTGGCTGGATAACTGGGGAAACATTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR GCA 72 bp | CGCCACTGTATTAAGATTTCAGCAACGGCCCCTCACTaGGCATGCCCAGCATCTGATACGCGTCCCTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: RHCIKISATAPH*ACPASDTRPSE Trigger: TTCAGAGGGACGCGTATCAGATGCTGGGCATGCGCAGTGAGGGGCCGTTGCTGAAATCTTAATACAGTGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CCA 72 bp | CCACAGCTGATTAACCATCGAGCAGCCAGTCACCTCTaGCACCGGTCTGCTGTGGTTTTGATTTGTGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: PQLINHRAASHL*HRSAVVLICVA Trigger: AGCAACACAAATCAAAACCACAGCAGACCGGTGCCAGAGGTGACTGGCTGCTCGATGGTTAATCAGCTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR-3UTR CAA 90 bp | GGTTCTAAGGCCAACTGCTCTGGGCTCACTCAGGCCGCCTCTGCTCTAGTGTTCTCAGGACTTCAGGCTTaGAGAACATTCTCATCAAAA | + |
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Preference number: 3 (lower is better) Translates to: GSKANCSGLTQAASALVFSGLQA*RTFSSK Trigger: TTTTGATGAGAATGTTCTCAAAGCCTGAAGTCCTGA...GAACACTAGAGCAGAGGCGGCCTGAGTGAGCCCAGAGCAGTTGGCCTTAGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | TCCTGTACCGCCCCCAAATCCAGAGTGATGACATTCTaGCAGAAGAACACATTCTCCGAGGAACAGGAACGC | + |
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Preference number: 3 (lower is better) Translates to: SCTAPKSRVMTF*QKNTFSEEQER Trigger: GCGTTCCTGTTCCTCGGAGAATGTGTTCTTCTGTCAGAATGTCATCACTCTGGATTTGGGGGCGGTACAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | AGGGTGTTGCCACAGCCCAGGCTGGCTCTGAACTTTTaGTCCTCTCGCTTTGTCACAAAGGTATGGATGACA | + |
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Preference number: 3 (lower is better) Translates to: RVLPQPRLALNF*SSRFVTKVWMT Trigger: TGTCATCCATACCTTTGTGACAAAGCGAGAGGATCAAAAGTTCAGAGCCAGCCTGGGCTGTGGCAACACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR GCA 72 bp | TATCTGACACCCAGGACCTGCTCACCCTTGGCTGCATaGGAGGAACTTGATCTTGACAAAGCTTTAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: YLTPRTCSPLAA*EELDLDKALEP Trigger: TGGCTCTAAAGCTTTGTCAAGATCAAGTTCCTCGCATGCAGCCAAGGGTGAGCAGGTCCTGGGTGTCAGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | CTTGAGATAGGGTGTTGCCACAGCCCAGGCTGGCTCTaGACTTTTGATCCTCTCGCTTTGTCACAAAGGTAT | + |
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Preference number: 3 (lower is better) Translates to: LEIGCCHSPGWL*TFDPLALSQRY Trigger: ATACCTTTGTGACAAAGCGAGAGGATCAAAAGTTCAGAGCCAGCCTGGGCTGTGGCAACACCCTATCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | TACTCAGTGGAAAATACCAGAAAGAGCTGGTGGATGTaGAGGCACACACCTTTAATGCCAGGACCCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: YSVENTRKSWWM*RHTPLMPGPRR Trigger: CCTCCTGGGTCCTGGCATTAAAGGTGTGTGCCTTCACATCCACCAGCTCTTTCTGGTATTTTCCACTGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | GGCCTTGCACTCACAAAGATCCACCTGCCTCTATATTaGACTCAGGAGATTTGTCTGCCTCTGTCTCCCAAG | + |
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Preference number: 3 (lower is better) Translates to: GLALTKIHLPLY*TQEICLPLSPK Trigger: CTTGGGAGACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGAGTGCAAGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR GCA 72 bp | TCCACCTGCCTCTATATTGAACTCAGGAGATTTGTCTaGCTCTGTCTCCCAAGCCCTGGGATTAAAGGCATG | + |
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Preference number: 3 (lower is better) Translates to: STCLYIELRRFV*LCLPSPGIKGM Trigger: CATGCCTTTAATCCCAGGGCTTGGGAGACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | AACTGGGAAACATCTGTATTCCAGCACATAGGAGGCTaGGACAGGAGGATTGCTGTGATTTCAAGACCAGCC | + |
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Preference number: 3 (lower is better) Translates to: NWETSVFQHIGG*DRRIAVISRPA Trigger: GGCTGGTCTTGAAATCACAGCAATCCTCCTGTCTCAGCCTCCTATGTGCTGGAATACAGATGTTTCCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CCA 72 bp | CAAGACCCCATCTTCAACCTAGGAAATTCCATTCTCTaGATGTCGATCCTGAAGCTCTTGAGGCTGGCAATG | + |
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Preference number: 3 (lower is better) Translates to: QDPIFNLGNSIL*MSILKLLRLAM Trigger: CATTGCCAGCCTCAAGAGCTTCAGGATCGACATCCAGAGAATGGAATTTCCTAGGTTGAAGATGGGGTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | TACAATCTAAACAAACCCAGGCCCACACCAGCCCAATaGCCTAACCCAGATGTTTATGAAGTTCCAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: YNLNKPRPTPAQ*PNPDVYEVPGD Trigger: GTCACCTGGAACTTCATAAACATCTGGGTTAGGTCATTGGGCTGGTGTGGGCCTGGGTTTGTTTAGATTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR GCA 72 bp | CCTCTGGCACCGGTCTGCTGTGGTTTTGATTTGTGTTaGTTAGCACTTTTAAGGCACTCAAAGCTCTCTATC | + |
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Preference number: 3 (lower is better) Translates to: PLAPVCCGFDLC*LALLRHSKLSI Trigger: GATAGAGAGCTTTGAGTGCCTTAAAAGTGCTAAGCAACACAAATCAAAACCACAGCAGACCGGTGCCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR TCA 72 bp | GAGACCTATGAGCAGTGGACTAAACACCAGATTTCTTaGGCTTGTCTACGTAAGAGAAATCTGACTCCCATG | + |
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Preference number: 3 (lower is better) Translates to: ETYEQWTKHQIS*ACLRKRNLTPM Trigger: CATGGGAGTCAGATTTCTCTTACGTAGACAAGCTCAAGAAATCTGGTGTTTAGTCCACTGCTCATAGGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR TCA 90 bp | AGCGCCACTGTATTAAGATTTCAGCAACGGCCCCTCACTGCGCATGCCCAGCATGCCGGTCGTGGAGGATaGTGGAGGGACATTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SATVLRFQQRPLTAHAQHAGRGG*WRDISE Trigger: CTCAGAAATGTCCCTCCATCATCCTCCACGACCGGC...ATGCTGGGCATGCGCAGTGAGGGGCCGTTGCTGAAATCTTAATACAGTGGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR TCA 90 bp | ATGTTTCCCCAGTTATCCAGCCACGCCTCATGTGGAGGGCCTGGAATCAAATCCTTGCTGCTAGAGGCCTaGAGGAGCCCCGAGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: MFPQLSSHASCGGPGIKSLLLEA*RSPEQT Trigger: TGTTTGCTCGGGGCTCCTTCAGGCCTCTAGCAGCAA...GGATTTGATTCCAGGCCCTCCACATGAGGCGTGGCTGGATAACTGGGGAAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR GCA 90 bp | CGAGCAGCCAGTCACCTCTGGCACCGGTCTGCTGTGGTTTTGATTTGTGTTGCTCAATCATGTCCTCATTaGCGTTCCAGCGGTGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: RAASHLWHRSAVVLICVAQSCPH*RSSGGR Trigger: CCTACCACCGCTGGAACGGCAATGAGGACATGATTG...AGCAACACAAATCAAAACCACAGCAGACCGGTGCCAGAGGTGACTGGCTGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CCA 90 bp | CGCGTCCCTCTGAACTCACGCAGCCATGAAGACCTGGTTCTAAGGCCAACTGCTAGGATAGGACAGCCATaGCTTCCGCACAGCATAATC | + |
|
Preference number: 4 (lower is better) Translates to: RVPLNSRSHEDLVLRPTARIGQP*LPHSII Trigger: GATTATGCTGTGCGGAAGCCATGGCTGTCCTATCCT...AGCAGTTGGCCTTAGAACCAGGTCTTCATGGCTGCGTGAGTTCAGAGGGACGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR TCA 90 bp | CGAGCAGCCAGTCACCTCTGGCACCGGTCTGCTGTGGTTTTGATTTGTGTTGCTGGACAGGAAGAGCTTTaGAATTTGTTCTTTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RAASHLWHRSAVVLICVAGQEEL*NLFFGE Trigger: CTCACCAAAGAACAAATTTCAAAGCTCTTCCTGTCC...AGCAACACAAATCAAAACCACAGCAGACCGGTGCCAGAGGTGACTGGCTGCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CCA 90 bp | TCACAAAGATCCACCTGCCTCTATATTGAACTCAGGAGATTTGTCTGCCTCTGTCCACTGCCCAGAGGTTaGAATCGGCAGCCGTCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SQRSTCLYIELRRFVCLCPLPRG*NRQPSM Trigger: CATTGACGGCTGCCGATTCCAACCTCTGGGCAGTGG...ACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CCA 90 bp | CAGGAAAGGTTCAAATTCCTCTCTGCTGACTCGGTCCTTCGAGAGCAGGACGCTCCACTTCATACATCTTaGTGGGGTTTCCTGTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QERFKFLSADSVLREQDAPLHTS*WGFLSV Trigger: AACAGACAGGAAACCCCACCAAGATGTATGAAGTGG...AGCGTCCTGCTCTCGAAGGACCGAGTCAGCAGAGAGGAATTTGAACCTTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| CDS-3UTR TCA 90 bp | CTTAATACTAGTGGCTATGATAGTCACTGGAGACCTATGAGCAGTGGACTAAACCCCCCACAAAGGCGTTaGTGTCTGTGCTCTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNTSGYDSHWRPMSSGLNPPQRR*CLCSGH Trigger: ATGGCCAGAGCACAGACATCAACGCCTTTGTGGGGG...GTTTAGTCCACTGCTCATAGGTCTCCAGTGACTATCATAGCCACTAGTATTAAG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CCA 90 bp | CTTAATACTAGTGGCTATGATAGTCACTGGAGACCTATGAGCAGTGGACTAAACCTTGCACCTTCAAAGTaGCCAAACGGCCCCCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: LNTSGYDSHWRPMSSGLNLAPSK*PNGPRP Trigger: AGGTCGGGGGCCGTTTGGCCACTTTGAAGGTGCAAG...GTTTAGTCCACTGCTCATAGGTCTCCAGTGACTATCATAGCCACTAGTATTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CAA 72 bp | TGGCCTTGCACTCACAAAGATCCACCTGCCTCTATATaGAACTCAGGAGATTTGTCTGCCTCTGTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: WPCTHKDPPASI*NSGDLSASVSQ Trigger: TTGGGAGACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGAGTGCAAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR TCA 90 bp | TGCTCACCCTTGGCTGCATGCGAGGAACTTGATCTTGACAAAGCTTTAGAGCCAAACGGTAGATCCTCATaGACTTGTCCAACAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CSPLAACEELDLDKALEPNGRSS*TCPTSL Trigger: AAGACTTGTTGGACAAGTTCATGAGGATCTACCGTT...TGGCTCTAAAGCTTTGTCAAGATCAAGTTCCTCGCATGCAGCCAAGGGTGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR TCA 90 bp | AATACTCAGTGGAAAATACCAGAAAGAGCTGGTGGATGTGAAGGCACACACCTTTATCGGAGTCATCAGTaGCAAGAATTGCCGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTQWKIPERAGGCEGTHLYRSHQ*QELPRG Trigger: GCCTCTCGGCAATTCTTGTCACTGATGACTCCGATA...AAGGTGTGTGCCTTCACATCCACCAGCTCTTTCTGGTATTTTCCACTGAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| 3UTR CAA 72 bp | AAAGATCCACCTGCCTCTATATTGAACTCAGGAGATTaGTCTGCCTCTGTCTCCCAAGCCCTGGGATTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KDPPASILNSGD*SASVSQALGLK Trigger: CTTTAATCCCAGGGCTTGGGAGACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CCA 90 bp | TGCTCACCCTTGGCTGCATGCGAGGAACTTGATCTTGACAAAGCTTTAGAGCCATTCGGAAAGTTATGTTaGACATCTTCCGGTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSPLAACEELDLDKALEPFGKLC*TSSGSK Trigger: CTTTGAACCGGAAGATGTCCAACATAACTTTCCGAA...TGGCTCTAAAGCTTTGTCAAGATCAAGTTCCTCGCATGCAGCCAAGGGTGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR TCA 90 bp | AATTACAAGCCTAAGTATATCCCATTGCAAATCAAGTCCACAAACGGTAGAAACCCCACATGTGCATTCTaGGGGACTGAAACCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: NYKPKYIPLQIKSTNGRNPTCAF*GTETHS Trigger: GCTATGGGTTTCAGTCCCTCAGAATGCACATGTGGG...GTTTCTACCGTTTGTGGACTTGATTTGCAATGGGATATACTTAGGCTTGTAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| CDS-3UTR TCA 90 bp | CTTAATACTAGTGGCTATGATAGTCACTGGAGACCTATGAGCAGTGGACTAAACCGTCTTCTCCTCTATTaGCATTACGGAGCCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LNTSGYDSHWRPMSSGLNRLLLY*HYGARY Trigger: ATATCTGGCTCCGTAATGTCAATAGAGGAGAAGACG...GTTTAGTCCACTGCTCATAGGTCTCCAGTGACTATCATAGCCACTAGTATTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| CDS-3UTR CCA 90 bp | TCACAAAGATCCACCTGCCTCTATATTGAACTCAGGAGATTTGTCTGCCTCTGTCACCAGCTGTTGATATaGGTCATTGAATTCCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQRSTCLYIELRRFVCLCHQLLI*VIEFLD Trigger: ATCGAGGAATTCAATGACCCATATCAACAGCTGGTG...ACAGAGGCAGACAAATCTCCTGAGTTCAATATAGAGGCAGGTGGATCTTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| CDS-3UTR GCA 90 bp | TATATATTTGGTTCCAAATCACAGGCTATCTCTGCTTCTATCTCTGAATCTATCCGTCTCGGAGAAGCCTaGTTTCTTCAGGTTTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: YIFGSKSQAISASISESIRLGEA*FLQVFT Trigger: CGTGAAAACCTGAAGAAAGCAGGCTTCTCCGAGACG...GATAGATTCAGAGATAGAAGCAGAGATAGCCTGTGATTTGGAACCAAATATATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| 3UTR CAA 72 bp | TCAAAAGTCACATTCTTAAAGTCAGGACTTCAGGCTTaGAGAACATTCTCATCAAAAGAGTATAAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKVTFLKSGLQA*RTFSSKEYKLP Trigger: TGGCAGTTTATACTCTTTTGATGAGAATGTTCTCAAAGCCTGAAGTCCTGACTTTAAGAATGTGACTTTTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS GCA 90 bp | AATCATGTCCTCATTGCCGTTCCAGCGGTGGTAGGCGAGGAGAGCTaGGTTGTAGCCGGCAATGGCGCTCATTTCCATGCAGCTGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NHVLIAVPAVVGEES*VVAGNGAHFHAAGR Trigger: GCGGCCAGCTGCATGGAAATGAGCGCCATTGCCGGCTACAACGCAGCTCTCCTCGCCTACCACCGCTGGAACGGCAATGAGGACATGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| CDS TCA 90 bp | ATTACCACCTTCCACTGCCCAGAGGTTGGAATCGGCAGCCGTCAATaGCACCGCCCCCACAAAGGCGTTGATGTCTGTGCTCTGGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: ITTFHCPEVGIGSRQ*HRPHKGVDVCALAI Trigger: TATGGCCAGAGCACAGACATCAACGCCTTTGTGGGGGCGGTGTCATTGACGGCTGCCGATTCCAACCTCTGGGCAGTGGAAGGTGGTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032065.15 ENSMUST00000153723.3 |
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| CDS-3UTR CAA 90 bp | CAGGAAAGGTTCAAATTCCTCTCTGCTGACTCGGTCCTTCGAGAGCAGGACGCTGCCCCCACAAAGGCGTaGATGTCTGTGCTCTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QERFKFLSADSVLREQDAAPTKA*MSVLWP Trigger: TGGCCAGAGCACAGACATCAACGCCTTTGTGGGGGC...AGCGTCCTGCTCTCGAAGGACCGAGTCAGCAGAGAGGAATTTGAACCTTTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CAA 90 bp | AGCGCCACTGTATTAAGATTTCAGCAACGGCCCCTCACTGCGCATGCCCAGCATTCCACTGCCCAGAGGTaGGAATCGGCAGCCGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SATVLRFQQRPLTAHAQHSTAQR*ESAAVN Trigger: ATTGACGGCTGCCGATTCCAACCTCTGGGCAGTGGA...ATGCTGGGCATGCGCAGTGAGGGGCCGTTGCTGAAATCTTAATACAGTGGCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CAA 90 bp | CGCGTCCCTCTGAACTCACGCAGCCATGAAGACCTGGTTCTAAGGCCAACTGCTGAGAGACCCAGCTCTTaGACAAATCGCTTCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RVPLNSRSHEDLVLRPTAERPSS*TNRFMC Trigger: GCACATGAAGCGATTTGTCAAAGAGCTGGGTCTCTC...AGCAGTTGGCCTTAGAACCAGGTCTTCATGGCTGCGTGAGTTCAGAGGGACGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CAA 90 bp | CGAGCAGCCAGTCACCTCTGGCACCGGTCTGCTGTGGTTTTGATTTGTGTTGCTGTTTTCACGGAGAGTTaGGTTAAGCAGTCTGACGTA | + |
|
Preference number: 5 (lower is better) Translates to: RAASHLWHRSAVVLICVAVFTES*VKQSDV Trigger: TACGTCAGACTGCTTAACCAAACTCTCCGTGAAAAC...AGCAACACAAATCAAAACCACAGCAGACCGGTGCCAGAGGTGACTGGCTGCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CAA 90 bp | AGGCTGAGACAGGAGGATTGCTGTGATTTCAAGACCAGCCTGGGCTGCATAATGACCAGCTTAATCACGTaGATTACAAACCAGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLRQEDCCDFKTSLGCIMTSLIT*ITNQLL Trigger: GAGCAGCTGGTTTGTAATCAACGTGATTAAGCTGGT...CATTATGCAGCCCAGGCTGGTCTTGAAATCACAGCAATCCTCCTGTCTCAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS-3UTR CAA 90 bp | CGAGCAGCCAGTCACCTCTGGCACCGGTCTGCTGTGGTTTTGATTTGTGTTGCTCTGAAGAGAGTGGAATaGAGTTCTCCTTTGATGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RAASHLWHRSAVVLICVALKRVE*SSPLMK Trigger: TTTCATCAAAGGAGAACTCAATTCCACTCTCTTCAG...AGCAACACAAATCAAAACCACAGCAGACCGGTGCCAGAGGTGACTGGCTGCTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS TCA 90 bp | CAGCCATGGCTTCCGCACAGCATAATCATAGGACAGGAAGAGCTTTaGAATTTGTTCTTTGGTGAGGATGTCCCTGGAGAAGGTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QPWLPHSIIIGQEEL*NLFFGEDVPGEGLP Trigger: TGGAAGACCTTCTCCAGGGACATCCTCACCAAAGAACAAATTTCAAAGCTCTTCCTGTCCTATGATTATGCTGTGCGGAAGCCATGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS GCA 90 bp | CATGACAGGAGCAATCATCTCGTTGAGAAACGTCTCGGAGAAGCCTaGTTTCTTCAGGTTTTCACGGAGAGTTTGGTTAAGCAGTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: HDRSNHLVEKRLGEA*FLQVFTESLVKQSD Trigger: GTCAGACTGCTTAACCAAACTCTCCGTGAAAACCTGAAGAAAGCAGGCTTCTCCGAGACGTTTCTCAACGAGATGATTGCTCCTGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032065.15 ENSMUST00000131500.2 ENSMUST00000153723.3 |
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| CDS CCA 90 bp | CAGAATGGGTCTCAGATCCTGTTTTATATACCACTTCATACATCTTaGTGGGGTTTCCTGTCTGTTTGGTCCTCGTCTTCTCCTCTATTG | + |
|
Preference number: 5 (lower is better) Translates to: QNGSQILFYIPLHTS*WGFLSVWSSSSPLL Trigger: CAATAGAGGAGAAGACGAGGACCAAACAGACAGGAAACCCCACCAAGATGTATGAAGTGGTATATAAAACAGGATCTGAGACCCATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS TCA 90 bp | AGAGTGGAATTGAGTTCTCCTTTGATGAAAGTTGTCACCAGCTGTTaGTATGGGTCATTGAATTCCTCGATGGGCGGATCAAAATTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RVELSSPLMKVVTSC*YGSLNSSMGGSKFR Trigger: CCGAAATTTTGATCCGCCCATCGAGGAATTCAATGACCCATATCAACAGCTGGTGACAACTTTCATCAAAGGAGAACTCAATTCCACTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032065.15 ENSMUST00000131500.2 |
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| CDS CCA 90 bp | AATGGGTCTCAGATCCTGTTTTATATACCACTTCATACATCTTGGTaGGGTTTCCTGTCTGTTTGGTCCTCGTCTTCTCCTCTATTGACA | + |
|
Preference number: 5 (lower is better) Translates to: NGSQILFYIPLHTSW*GFLSVWSSSSPLLT Trigger: TGTCAATAGAGGAGAAGACGAGGACCAAACAGACAGGAAACCCCACCAAGATGTATGAAGTGGTATATAAAACAGGATCTGAGACCCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS CCA 90 bp | GGAATTGAGTTCTCCTTTGATGAAAGTTGTCACCAGCTGTTGATATaGGTCATTGAATTCCTCGATGGGCGGATCAAAATTTCGGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: GIEFSFDESCHQLLI*VIEFLDGRIKISES Trigger: ACTTTCCGAAATTTTGATCCGCCCATCGAGGAATTCAATGACCCATATCAACAGCTGGTGACAACTTTCATCAAAGGAGAACTCAATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032065.15 ENSMUST00000131500.2 |
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| CDS GCA 72 bp | CTCATTGCCGTTCCAGCGGTGGTAGGCGAGGAGAGCTaGGTTGTAGCCGGCAATGGCGCTCATTTCCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: LIAVPAVVGEES*VVAGNGAHFHA Trigger: TGCATGGAAATGAGCGCCATTGCCGGCTACAACGCAGCTCTCCTCGCCTACCACCGCTGGAACGGCAATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| CDS TCA 72 bp | TTCCACTGCCCAGAGGTTGGAATCGGCAGCCGTCAATaGCACCGCCCCCACAAAGGCGTTGATGTCTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FHCPEVGIGSRQ*HRPHKGVDVCA Trigger: AGCACAGACATCAACGCCTTTGTGGGGGCGGTGTCATTGACGGCTGCCGATTCCAACCTCTGGGCAGTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032065.15 ENSMUST00000153723.3 |
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| CDS CCA 72 bp | CCCCTGCCTCGTAGTCATGACCTTGCACCTTCAAAGTaGCCAAACGGCCCCCGACCTCTTCTCTCTCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: PLPRSHDLAPSK*PNGPRPLLSQT Trigger: TGTTTGAGAGAGAAGAGGTCGGGGGCCGTTTGGCCACTTTGAAGGTGCAAGGTCATGACTACGAGGCAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032065.15 ENSMUST00000204116.2 |
||
| CDS CAA 72 bp | AACCAGCTGCTCTCCTCAAACACCAGAGACTTTCCATaGTACACGCCCACCAGGCCACCTGAAGCGGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: NQLLSSNTRDFP*YTPTRPPEAGT Trigger: TGTTCCCGCTTCAGGTGGCCTGGTGGGCGTGTACAATGGAAAGTCTCTGGTGTTTGAGGAGAGCAGCTGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032065.15 ENSMUST00000153723.3 ENSMUST00000204116.2 |
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| CDS GCA 72 bp | TTTCATACAGGTCGTCCTGATCAATCATGTCCTCATTaGCGTTCCAGCGGTGGTAGGCGAGGAGAGCTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: FHTGRPDQSCPH*RSSGGRRGELR Trigger: ACGCAGCTCTCCTCGCCTACCACCGCTGGAACGGCAATGAGGACATGATTGATCAGGACGACCTGTATGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
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| CDS CAA 90 bp | TTGATTACAAACCAGCTGCTCTCCTCAAACACCAGAGACTTTCCATaGTACACGCCCACCAGGCCACCTGAAGCGGGAACACTGGAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LITNQLLSSNTRDFP*YTPTRPPEAGTLER Trigger: TCTCTCCAGTGTTCCCGCTTCAGGTGGCCTGGTGGGCGTGTACAATGGAAAGTCTCTGGTGTTTGAGGAGAGCAGCTGGTTTGTAATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032065.15 ENSMUST00000153723.3 ENSMUST00000204116.2 |
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| CDS TCA 72 bp | TACAGCTCCGTCTTAAGCCTTTCATACAGGTCGTCCTaGTCAATCATGTCCTCATTGCCGTTCCAGCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: YSSVLSLSYRSS*SIMSSLPFQRW Trigger: CCACCGCTGGAACGGCAATGAGGACATGATTGATCAGGACGACCTGTATGAAAGGCTTAAGACGGAGCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| CDS CCA 72 bp | TTTCTGAGGAGGCTCATAGTGAGGATAGGACAGCCATaGCTTCCGCACAGCATAATCATAGGACAGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLRRLIVRIGQP*LPHSIIIGQEE Trigger: CTCTTCCTGTCCTATGATTATGCTGTGCGGAAGCCATGGCTGTCCTATCCTCACTATGAGCCTCCTCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| CDS CAA 72 bp | GGAGAAGCCTGCTTTCTTCAGGTTTTCACGGAGAGTTaGGTTAAGCAGTCTGACGTAGTCATCCCCTCCGAT | + |
|
Preference number: 6 (lower is better) Translates to: GEACFLQVFTES*VKQSDVVIPSD Trigger: ATCGGAGGGGATGACTACGTCAGACTGCTTAACCAAACTCTCCGTGAAAACCTGAAGAAAGCAGGCTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032065.15 ENSMUST00000131500.2 ENSMUST00000153723.3 |
||
| CDS CAA 72 bp | ACCACTTCATACATCTTGGTGGGGTTTCCTGTCTGTTaGGTCCTCGTCTTCTCCTCTATTGACATTACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTSYILVGFPVC*VLVFSSIDITE Trigger: CTCCGTAATGTCAATAGAGGAGAAGACGAGGACCAAACAGACAGGAAACCCCACCAAGATGTATGAAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032065.15 |
||
| CDS CAA 72 bp | TACAGCTCCGTCTTAAGCCTTTCATACAGGTCGTCGTaGATTACAAACCAGCTGCTCTCCTCAAACACCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YSSVLSLSYRSS*ITNQLLSSNTR Trigger: TCTGGTGTTTGAGGAGAGCAGCTGGTTTGTAATCAACGACGACCTGTATGAAAGGCTTAAGACGGAGCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204116.2 |
||
| CDS TCA 72 bp | TTGAGTTCTCCTTTGATGAAAGTTGTCACCAGCTGTTaGTATGGGTCATTGAATTCCTCGATGGGCGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSPLMKVVTSC*YGSLNSSMGGS Trigger: TGATCCGCCCATCGAGGAATTCAATGACCCATATCAACAGCTGGTGACAACTTTCATCAAAGGAGAACTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032065.15 ENSMUST00000131500.2 |
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