Pregenerated sensors for PCSK6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030513Ensembl transcript IDs: ENSMUST00000055576.12, ENSMUST00000098391.11, ENSMUST00000176199.8, ENSMUST00000176209.2
Found 441 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GATGCTGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATaGAGGGCTACCCCAAGGAACAGGCTATGGCTGACCATCTGTAGG | + |
Preference number: 1 (lower is better) Translates to: DAAVEPSSGGDTAVR*RATPRNRLWLTICR Trigger: CCTACAGATGGTCAGCCATAGCCTGTTCCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCAGCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CCA 90 bp | TCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTaGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGAACAG | + |
Preference number: 1 (lower is better) Translates to: STCSGAQRCCSRTQL*GRYSCQMQGYPKEQ Trigger: CTGTTCCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR GCA 90 bp | ATATCCTTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTaGAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAG | + |
Preference number: 1 (lower is better) Translates to: ISLRATSTCSGAQRC*SRTQLWGRYSCQMQ Trigger: CTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAAGGATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR GCA 90 bp | CACATATCCTTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATaGTGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATG | + |
Preference number: 1 (lower is better) Translates to: HISLRATSTCSGAQR*CSRTQLWGRYSCQM Trigger: CATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAAGGATATGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR TCA 90 bp | GGACGTGATGTGACGCCAGGCATCTCGCTTTTTCTGCTTTGGTCTTaGAGTCTCAGTAAACTAGGGTCCCAGAAGCCACTCCGAAGCTGC | + |
Preference number: 1 (lower is better) Translates to: GRDVTPGISLFLLWS*SLSKLGSQKPLRSC Trigger: GCAGCTTCGGAGTGGCTTCTGGGACCCTAGTTTACTGAGACTTCAAGACCAAAGCAGAAAAAGCGAGATGCCTGGCGTCACATCACGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR GCA 90 bp | ATACTGGACCAGCGCAGCATCCACCCAAGAACAGAGAGTCCCGAGTaGAGAGGCCAAATACACTTGAAAAGCAGTTGTGTGCCATGGAGG | + |
Preference number: 1 (lower is better) Translates to: ILDQRSIHPRTESPE*RGQIHLKSSCVPWR Trigger: CCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATGCTGCGCTGGTCCAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR TCA 90 bp | TCGCTGAGATTTGTCACGGCCACACAGATATGTGGGAGGAGGACGTaGTGTGACGCCAGGCATCTCGCTTTTTCTGCTTTGGTCTTGAAG | + |
Preference number: 1 (lower is better) Translates to: SLRFVTATQICGRRT*CDARHLAFSALVLK Trigger: CTTCAAGACCAAAGCAGAAAAAGCGAGATGCCTGGCGTCACATCACGTCCTCCTCCCACATATCTGTGTGGCCGTGACAAATCTCAGCGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR TCA 90 bp | TCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTaGAAAGCAGTTGTGTGCCATGGAGGGCTGGCGACTAGTGATTCA | + |
Preference number: 1 (lower is better) Translates to: STQEQRVPSAEAKYT*KAVVCHGGLATSDS Trigger: TGAATCACTAGTCGCCAGCCCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR TCA 90 bp | GAGATTTGTCACGGCCACACAGATATGTGGGAGGAGGACGTGATGTaGCGCCAGGCATCTCGCTTTTTCTGCTTTGGTCTTGAAGTCTCA | + |
Preference number: 1 (lower is better) Translates to: EICHGHTDMWEEDVM*RQASRFFCFGLEVS Trigger: TGAGACTTCAAGACCAAAGCAGAAAAAGCGAGATGCCTGGCGTCACATCACGTCCTCCTCCCACATATCTGTGTGGCCGTGACAAATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTaGACCAGCGCAGCATCCACCCAAGAACAGAGAGTCCCGAGTGCA | + |
Preference number: 1 (lower is better) Translates to: GRKINPALSCRLVPY*TSAASTQEQRVPSA Trigger: TGCACTCGGGACTCTCTGTTCTTGGGTGGATGCTGCGCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCGATACAGCTGTCAGATaGAGGGCTACCCCAAGGAAC | + |
Preference number: 2 (lower is better) Translates to: GPGGPRDTGRTAMWTARLDTAVR*RATPRN Trigger: GTTCCTTGGGGTAGCCCTGCATCTGACAGCTGTATC...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR TCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCACGCTGAAGAGAGGATaGGTGGACCTATTTCGGTTT | + |
Preference number: 2 (lower is better) Translates to: GPGGPRDTGRTAMWTARLTLKRG*VDLFRF Trigger: AAACCGAAATAGGTCCACTCATCCTCTCTTCAGCGT...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTGATACAGCTGTCAGATaGAGGGCTACCCCAAGGAAC | + |
Preference number: 2 (lower is better) Translates to: CPSGCLVASDAQGGSEALDTAVR*RATPRN Trigger: GTTCCTTGGGGTAGCCCTGCATCTGACAGCTGTATC...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGGATACAGCTGTCAGATaGAGGGCTACCCCAAGGAAC | + |
Preference number: 2 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRDTAVR*RATPRN Trigger: GTTCCTTGGGGTAGCCCTGCATCTGACAGCTGTATC...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGCCAAGGAACAGGCTATaGCTGACCATCTGTAGGAAG | + |
Preference number: 2 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRPRNRL*LTICRK Trigger: CTTCCTACAGATGGTCAGCCATAGCCTGTTCCTTGG...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR TCA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTGAGGAGGACGTGATGTaGCGCCAGGCATCTCGCTTT | + |
Preference number: 2 (lower is better) Translates to: GAAVSEGADCVDIDSLSSEEDVM*RQASRF Trigger: AAAGCGAGATGCCTGGCGTCACATCACGTCCTCCTC...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CAA 90 bp | AACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCAGTaGTGTGCCATGGAGGGCTGGCGACTAGTGATTCAGGGGCTGGCT | + |
Preference number: 2 (lower is better) Translates to: NRESRVQRPNTLEKQ*CAMEGWRLVIQGLA Trigger: AGCCAGCCCCTGAATCACTAGTCGCCAGCCCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATGGTGCTCAGAGATGCTaGAGTAGAACCCAGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: LQSERRAGPCGERRGWGNGAQRC*SRTQLW Trigger: CCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACC...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTAGTAGAACCCAGCTCTaGGGGAGATACAGCTGTCAG | + |
Preference number: 2 (lower is better) Translates to: GAAVSEGADCVDIDSLSSSRTQL*GRYSCQ Trigger: CTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACT...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTCAGGTGCTCAGAGATaGTGCAGTAGAACCCAGCTC | + |
Preference number: 2 (lower is better) Translates to: DKHITVREESRTMWRETRSGAQR*CSRTQL Trigger: GAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGA...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGAGTAGAACCCAGCTCTaGGGGAGATACAGCTGTCAG | + |
Preference number: 2 (lower is better) Translates to: DKHITVREESRTMWRETRSRTQL*GRYSCQ Trigger: CTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACT...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCGTCCCTCCGGCTGTTTaGTGGCCAGTGATGCACAGG | + |
Preference number: 2 (lower is better) Translates to: GRKINPALSCRLVPYWTSVPPAV*WPVMHR Trigger: CCTGTGCATCACTGGCCACCAAACAGCCGGAGGGAC...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGGTCCCTCCGGCTGTTTaGTGGCCAGTGATGCACAGG | + |
Preference number: 2 (lower is better) Translates to: WRETRLGKFKASVIPLAQVPPAV*WPVMHR Trigger: CCTGTGCATCACTGGCCACCAAACAGCCGGAGGGAC...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CAA 90 bp | AAACCCATTTTATTTACAGTCCGATCAAACTGTCCCTCCGGCTGTTaGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCAT | + |
Preference number: 2 (lower is better) Translates to: KPILFTVRSNCPSGC*VASDAQGGSEALHH Trigger: ATGATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACAGTTTGATCGGACTGTAAATAAAATGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | CCTTGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGGAGAGCAGTCAGGTGCTCAGAGATaGTGCAGTAGAACCCAGCTC | + |
Preference number: 2 (lower is better) Translates to: PCHLQVTRQTHYSQRGEQSGAQR*CSRTQL Trigger: GAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGA...CTGCTCTCCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGACAGAGAGTCCCGAGTaGAGAGGCCAAATACACTTG | + |
Preference number: 2 (lower is better) Translates to: DKHITVREESRTMWRETRTESPE*RGQIHL Trigger: CAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGT...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTGTCCCTCCGGCTGTTTaGTGGCCAGTGATGCACAGG | + |
Preference number: 2 (lower is better) Translates to: MWRETRLGKFKASVIPLAVPPAV*WPVMHR Trigger: CCTGTGCATCACTGGCCACCAAACAGCCGGAGGGAC...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCTGTGCCATGGAGGGCTaGCGACTAGTGATTCAGGGG | + |
Preference number: 2 (lower is better) Translates to: GRKINPALSCRLVPYWTSCAMEG*RLVIQG Trigger: CCCCTGAATCACTAGTCGCCAGCCCTCCATGGCACA...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CAA 90 bp | CACACAGGCTTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTaGTACCATACTGGACCAGCGCAGCATCCACCCAAGAACAGAGAG | + |
Preference number: 2 (lower is better) Translates to: HTGLAEKSIQLYHVG*YHTGPAQHPPKNRE Trigger: CTCTCTGTTCTTGGGTGGATGCTGCGCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAAGCCTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR TCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCTGTTTGGTGGCCAGTaGTGCACAGGGAGGAAGCGA | + |
Preference number: 2 (lower is better) Translates to: MWRETRLGKFKASVIPLALFGGQ*CTGRKR Trigger: TCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCGGTGCTCAGAGATGCTaGAGTAGAACCCAGCTCTGG | + |
Preference number: 2 (lower is better) Translates to: VQGDFCQFSHISLRATSTGAQRC*SRTQLW Trigger: CCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACC...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATTTCAGGGGCTGGCTTTaGATGTTTATGGAACTGCCT | + |
Preference number: 2 (lower is better) Translates to: LQSERRAGPCGERRGWGNFRGWL*MFMELP Trigger: AGGCAGTTCCATAAACATGCAAAGCCAGCCCCTGAA...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGTCAGGTGCTCAGAGATaGTGCAGTAGAACCCAGCTC | + |
Preference number: 2 (lower is better) Translates to: WRETRLGKFKASVIPLAQSGAQR*CSRTQL Trigger: GAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGA...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR GCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGTTCAGGGGCTGGCTTTaGATGTTTATGGAACTGCCT | + |
Preference number: 2 (lower is better) Translates to: HPPKNRESRVQRPNTLEKFRGWL*MFMELP Trigger: AGGCAGTTCCATAAACATGCAAAGCCAGCCCCTGAA...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR TCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTTCTGCTTTGGTCTTaGAGTCTCAGTAAACTAGGG | + |
Preference number: 2 (lower is better) Translates to: DKHITVREESRTMWRETRFLLWS*SLSKLG Trigger: CCCTAGTTTACTGAGACTTCAAGACCAAAGCAGAAA...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGCCAAGGAACAGGCTATaGCTGACCATCTGTAGGAAG | + |
Preference number: 2 (lower is better) Translates to: WRETRLGKFKASVIPLAQPRNRL*LTICRK Trigger: CTTCCTACAGATGGTCAGCCATAGCCTGTTCCTTGG...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGCCATCAGATGTCTTTTaGCTAATCCTAAGTAGCTCC | + |
Preference number: 2 (lower is better) Translates to: DKHITVREESRTMWRETRPSDVF*LILSSS Trigger: GGAGCTACTTAGGATTAGCCAAAAGACATCTGATGG...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCACCAAGGAACAGGCTATaGCTGACCATCTGTAGGAAG | + |
Preference number: 2 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPPRNRL*LTICRK Trigger: CTTCCTACAGATGGTCAGCCATAGCCTGTTCCTTGG...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTATGCCCACACAGGCTTaGCAGAAAAATCAATCCAGC | + |
Preference number: 2 (lower is better) Translates to: MWRETRLGKFKASVIPLAMPTQA*QKNQSS Trigger: GCTGGATTGATTTTTCTGCCAAGCCTGTGTGGGCAT...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR TCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCCCGAAGCTGCAGGTATaGGTCTCACAATTCATTTTT | + |
Preference number: 2 (lower is better) Translates to: GRKINPALSCRLVPYWTSPKLQV*VSQFIF Trigger: AAAAATGAATTGTGAGACTCATACCTGCAGCTTCGG...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR TCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCTTTCTGCTTTGGTCTTaGAGTCTCAGTAAACTAGGG | + |
Preference number: 2 (lower is better) Translates to: GRKINPALSCRLVPYWTSFLLWS*SLSKLG Trigger: CCCTAGTTTACTGAGACTTCAAGACCAAAGCAGAAA...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR TCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAACGCTGAAGAGAGGATaGGTGGACCTATTTCGGTTT | + |
Preference number: 2 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPTLKRG*VDLFRF Trigger: AAACCGAAATAGGTCCACTCATCCTCTCTTCAGCGT...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CAA 90 bp | GATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTCCTaGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGG | + |
Preference number: 2 (lower is better) Translates to: DFLFEVWIQQTTAES*PPTGDKTNTLQSER Trigger: CCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGGACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR-3UTR TCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCCGAAGCTGCAGGTATaGGTCTCACAATTCATTTTT | + |
Preference number: 2 (lower is better) Translates to: MWRETRLGKFKASVIPLAPKLQV*VSQFIF Trigger: AAAAATGAATTGTGAGACTCATACCTGCAGCTTCGG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR-3UTR CCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCCATCAGATGTCTTTTaGCTAATCCTAAGTAGCTCC | + |
Preference number: 2 (lower is better) Translates to: MWRETRLGKFKASVIPLAPSDVF*LILSSS Trigger: GGAGCTACTTAGGATTAGCCAAAAGACATCTGATGG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR-3UTR GCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTTCGGAAGGAGCTGACTaGGTAGACATAGATTCTCTC | + |
Preference number: 2 (lower is better) Translates to: FASLISYLKCGFNRQQLSSEGAD*VDIDSL Trigger: GAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGA...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR CCA 72 bp | CCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTaGACAGCTCGGCTCACTCAGAAGAGAACGCTGAAG | + |
Preference number: 3 (lower is better) Translates to: PGGPRDTGRTAM*TARLTQKRTLK Trigger: CTTCAGCGTTCTCTTCTGAGTGAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR GCA 72 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATaGAGGGCTACCCCAAGGAACAGGCTATGGCTGACC | + |
Preference number: 3 (lower is better) Translates to: VEPSSGGDTAVR*RATPRNRLWLT Trigger: GGTCAGCCATAGCCTGTTCCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR GCA 72 bp | AGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTaGAGTAGAACCCAGCTCTGGGGGAGATACAGCTGT | + |
Preference number: 3 (lower is better) Translates to: RATSTCSGAQRC*SRTQLWGRYSC Trigger: ACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR CCA 72 bp | TTACAGTCCGATCAAACTGTCCCTCCGGCTGTTTGGTaGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTC | + |
Preference number: 3 (lower is better) Translates to: LQSDQTVPPAVW*PVMHREEARPF Trigger: GAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACAGTTTGATCGGACTGTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CAA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAATGTCCCTCCGGCTGTTaGGTGGCCAGTGATGCACAG | + |
Preference number: 3 (lower is better) Translates to: HYSQRGEQDHVERDEVGECPSGC*VASDAQ Trigger: CTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR GCA 72 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATaGTGCAGTAGAACCCAGCTCTGGGGGAGATACAGC | + |
Preference number: 3 (lower is better) Translates to: LRATSTCSGAQR*CSRTQLWGRYS Trigger: GCTGTATCTCCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CCA 72 bp | TATTTACAGTCCGATCAAACTGTCCCTCCGGCTGTTTaGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCC | + |
Preference number: 3 (lower is better) Translates to: YLQSDQTVPPAV*WPVMHREEARP Trigger: GGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACAGTTTGATCGGACTGTAAATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR TCA 72 bp | GAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTaGAAAGCAGTTGTGTGCCATGGAGGGCTGGCGACT | + |
Preference number: 3 (lower is better) Translates to: EQRVPSAEAKYT*KAVVCHGGLAT Trigger: AGTCGCCAGCCCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR GCA 72 bp | CAGCGCAGCATCCACCCAAGAACAGAGAGTCCCGAGTaGAGAGGCCAAATACACTTGAAAAGCAGTTGTGTG | + |
Preference number: 3 (lower is better) Translates to: QRSIHPRTESPE*RGQIHLKSSCV Trigger: CACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATGCTGCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR-3UTR CAA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATATTCAGGGGCTGGCTTaGCATGTTTATGGAACTGCC | + |
Preference number: 3 (lower is better) Translates to: LQSERRAGPCGERRGWGNIQGLA*HVYGTA Trigger: GGCAGTTCCATAAACATGCAAAGCCAGCCCCTGAAT...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR TCA 72 bp | GTGACGCCAGGCATCTCGCTTTTTCTGCTTTGGTCTTaGAGTCTCAGTAAACTAGGGTCCCAGAAGCCACTC | + |
Preference number: 3 (lower is better) Translates to: VTPGISLFLLWS*SLSKLGSQKPL Trigger: GAGTGGCTTCTGGGACCCTAGTTTACTGAGACTTCAAGACCAAAGCAGAAAAAGCGAGATGCCTGGCGTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR-3UTR CAA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGAATGCCCACACAGGCTaGGCAGAAAAATCAATCCAG | + |
Preference number: 3 (lower is better) Translates to: DKHITVREESRTMWRETRNAHTG*AEKSIQ Trigger: CTGGATTGATTTTTCTGCCAAGCCTGTGTGGGCATT...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CCA 72 bp | AATACACTTGAAAAGCAGTTGTGTGCCATGGAGGGCTaGCGACTAGTGATTCAGGGGCTGGCTTTGCATGTT | + |
Preference number: 3 (lower is better) Translates to: NTLEKQLCAMEG*RLVIQGLALHV Trigger: AACATGCAAAGCCAGCCCCTGAATCACTAGTCGCCAGCCCTCCATGGCACACAACTGCTTTTCAAGTGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CCA 72 bp | ATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTaGACCAGCGCAGCATCCACCCAAGAACAGAGAGTC | + |
Preference number: 3 (lower is better) Translates to: INPALSCRLVPY*TSAASTQEQRV Trigger: GACTCTCTGTTCTTGGGTGGATGCTGCGCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
3UTR-3UTR CAA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCACACTTGAAAAGCAGTaGTGTGCCATGGAGGGCTGG | + |
Preference number: 3 (lower is better) Translates to: GRKINPALSCRLVPYWTSTLEKQ*CAMEGW Trigger: CCAGCCCTCCATGGCACACAACTGCTTTTCAAGTGT...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CAA 90 bp | CCTTGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGGAGAGCAGTGGAGAGAGACGAGGTaGGGGAAATTTAAGGCAAGT | + |
Preference number: 3 (lower is better) Translates to: PCHLQVTRQTHYSQRGEQWRETR*GKFKAS Trigger: ACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA...CTGCTCTCCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CCA 72 bp | GCGACTAGTGATTCAGGGGCTGGCTTTGCATGTTTATaGAACTGCCTGGCCATCAGATGTCTTTTGGCTAAT | + |
Preference number: 3 (lower is better) Translates to: ATSDSGAGFACL*NCLAIRCLLAN Trigger: ATTAGCCAAAAGACATCTGATGGCCAGGCAGTTCCATAAACATGCAAAGCCAGCCCCTGAATCACTAGTCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR GCA 72 bp | CTCAGTAAACTAGGGTCCCAGAAGCCACTCCGAAGCTaGAGGTATGAGTCTCACAATTCATTTTTGTTCCTG | + |
Preference number: 3 (lower is better) Translates to: LSKLGSQKPLRS*RYESHNSFLFL Trigger: CAGGAACAAAAATGAATTGTGAGACTCATACCTGCAGCTTCGGAGTGGCTTCTGGGACCCTAGTTTACTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR TCA 72 bp | ACTAGGGTCCCAGAAGCCACTCCGAAGCTGCAGGTATaGGTCTCACAATTCATTTTTGTTCCTGTTTTGAGT | + |
Preference number: 3 (lower is better) Translates to: TRVPEATPKLQV*VSQFIFVPVLS Trigger: ACTCAAAACAGGAACAAAAATGAATTGTGAGACTCATACCTGCAGCTTCGGAGTGGCTTCTGGGACCCTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR-3UTR CAA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTACTGAGCAAGCGGATTaGCGCATTTCAATGAAAATA | + |
Preference number: 3 (lower is better) Translates to: MWRETRLGKFKASVIPLATEQAD*RISMKI Trigger: TATTTTCATTGAAATGCGCAAATCCGCTTGCTCAGT...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCCAGTGTGGCCGTCGGTaGAGCGCTGACGCAGATCTG | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLQCGRR*SADADL Trigger: CAGATCTGCGTCAGCGCTGCACCGACGGCCACACTG...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCACTGTGCTGGGCTCCTaGCCGTGCACGTCTCACATC | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLTVLGS*PCTSHI Trigger: GATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGT...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCGCACTGCCCAGTGGTTaGTGTAGACGGGGCGCGGCG | + |
Preference number: 4 (lower is better) Translates to: CSRTQLWGRYSCQMQGYPALPSG*CRRGAA Trigger: CGCCGCGCCCCGTCTACACCAACCACTGGGCAGTGC...GGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCCCATCACAGGAGCAGTaGTCCCCTTCTCTCCCACCA | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLPSQEQ*SPSLPP Trigger: TGGTGGGAGAGAAGGGGACCACTGCTCCTGTGATGG...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTGTTGTCCAGCAGCCTTaGGAGGCTCCTGCTCCGGGA | + |
Preference number: 4 (lower is better) Translates to: CPSGCLVASDAQGGSEALVVQQP*EAPAPG Trigger: TCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAAC...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGTCATCCACGCACTTCTaGCAGCTCGGGTGGCACCTG | + |
Preference number: 4 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRSSTHF*QLGWHL Trigger: CAGGTGCCACCCGAGCTGTCAGAAGTGCGTGGATGA...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGTACACTCTTCTCTGCTaGGCCCCACACAGGTCCGGC | + |
Preference number: 4 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRYTLLC*APHRSG Trigger: GCCGGACCTGTGTGGGGCCCAGCAGAGAAGAGTGTA...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCCAATCTGGCCCAAGTTaGGGTAGCCGTGCGCCGCAG | + |
Preference number: 4 (lower is better) Translates to: CSRTQLWGRYSCQMQGYPQSGPS*GSRAPQ Trigger: CTGCGGCGCACGGCTACCTCAACTTGGGCCAGATTG...GGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR TCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCCAATGTAGTTGGGTCTaGTGCCCAGAGACTTGGCCT | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLQCSWV*CPETWP Trigger: AGGCCAAGTCTCTGGGCATCAGACCCAACTACATTG...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCCTAGAGCCAAGGCAATaGTACCAGCCACCATGGGGG | + |
Preference number: 4 (lower is better) Translates to: PPAVWWPVMHREEARPFILEPRQ*YQPPWG Trigger: CCCCCATGGTGGCTGGTATCATTGCCTTGGCTCTAG...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTATCCGTGAGCGAGACTaGTGGGAGCTGAAGGTGCGA | + |
Preference number: 4 (lower is better) Translates to: CPSGCLVASDAQGGSEALIRERD*WELKVR Trigger: TCGCACCTTCAGCTCCCATCAGTCTCGCTCACGGAT...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGCAGTGTGGCCGTCGGTaGAGCGCTGACGCAGATCTG | + |
Preference number: 4 (lower is better) Translates to: VEPSSGGDTAVRCRATPRQCGRR*SADADL Trigger: CAGATCTGCGTCAGCGCTGCACCGACGGCCACACTG...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCGTTCACAGTCCGGAATaGAGCTGCCCCGTGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: CSRTQLWGRYSCQMQGYPVHSPE*SCPVPG Trigger: GCCTGGCACGGGGCAGCTGCATTCCGGACTGTGAAC...GGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCATTCTGAGGAAGGTGTaGGGGCCCCTGCTGCTCAAG | + |
Preference number: 4 (lower is better) Translates to: PPAVWWPVMHREEARPFIILRKV*GPLLLK Trigger: CTTGAGCAGCAGGGGCCCCCACACCTTCCTCAGAAT...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCCTATGGGGATGCTCCTaGGCCTTTTGTCTGCGGTGG | + |
Preference number: 4 (lower is better) Translates to: PPAVWWPVMHREEARPFILWGCS*AFCLRW Trigger: CCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAG...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CCA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCGAGGGAGAAATCAGGTaGATCTGGAGATCGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: PPAVWWPVMHREEARPFIEGEIR*IWRSPR Trigger: CCGGGGCGATCTCCAGATCCACCTGATTTCTCCCTC...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCTCTTCCTCGTCTTCTaGAGTCTCTGCCTGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: CPSGCLVASDAQGGSEALLFLVF*SLCLGW Trigger: CCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAG...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGAGACAGGCACTGTGCTaGGCTCCTGCCCGTGCACGT | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGRQALC*APARAR Trigger: ACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCT...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCGCATTGCTGCACGTGTaGTTGGTGATGCAGGAGGTT | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLALLHV*LVMQEV Trigger: AACCTCCTGCATCACCAACCACACGTGCAGCAATGC...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCGTGCGGCAGCAAAACTaGATGAAGAGCTTCCGTTCG | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLVRQQN*MKSFRS Trigger: CGAACGGAAGCTCTTCATCCAGTTTTGCTGCCGCAC...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGTCATCCACGCACTTCTaGCAGCTCGGGTGGCACCTG | + |
Preference number: 4 (lower is better) Translates to: VEPSSGGDTAVRCRATPRSSTHF*QLGWHL Trigger: CAGGTGCCACCCGAGCTGTCAGAAGTGCGTGGATGA...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTTTCACCAGCAGGTGCTaGACATCCCTCCAGGTCAAC | + |
Preference number: 4 (lower is better) Translates to: CPSGCLVASDAQGGSEALFTSRC*TSLQVN Trigger: GTTGACCTGGAGGGATGTGCAGCACCTGCTGGTGAA...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCTGCGATGGTATATCCTaGACTTCCAGAGTCCACTCC | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLCDGIS*TSRVHS Trigger: GGAGTGGACTCTGGAAGTGCAGGATATACCATCGCA...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAGCACTGCCCAGTGGTTaGTGTAGACGGGGCGCGGCG | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGEALPSG*CRRGAA Trigger: CGCCGCGCCCCGTCTACACCAACCACTGGGCAGTGC...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CCA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGGTAGCACCTGCACTATaGGGATGCTCCTGGGCCTTT | + |
Preference number: 4 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRVAPAL*GCSWAF Trigger: AAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTAC...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CCA 90 bp | TGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCTCTGGAGTCTCTGCCTaGGGTGGTTGTCCAGCAGCC | + |
Preference number: 4 (lower is better) Translates to: CSRTQLWGRYSCQMQGYPSGVSA*GGCPAA Trigger: GGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGA...GGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGTACACTCTTCTCTGCTaGGCCCCACACAGGTCCGGC | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGYTLLC*APHRSG Trigger: GCCGGACCTGTGTGGGGCCCAGCAGAGAAGAGTGTA...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCTGGACGTTCATCTCTaGCCGACAGCGACTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: CPSGCLVASDAQGGSEALLDVHL*PTATVL Trigger: AAGAACAGTCGCTGTCGGTCAGAGATGAACGTCCAG...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCCAATGTAGTTGGGTCTaGTGCCCAGAGACTTGGCCT | + |
Preference number: 4 (lower is better) Translates to: PPAVWWPVMHREEARPFIQCSWV*CPETWP Trigger: AGGCCAAGTCTCTGGGCATCAGACCCAACTACATTG...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGTATGCCCAGCTCCGTTaGCTTTCCAGTCGCTCGCCT | + |
Preference number: 4 (lower is better) Translates to: VEPSSGGDTAVRCRATPRYAQLR*LSSRSP Trigger: AGGCGAGCGACTGGAAAGTCAACGGAGCTGGGCATA...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR TCA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGATCCGTGAGCGAGACTaGTGGGAGCTGAAGGTGCGA | + |
Preference number: 4 (lower is better) Translates to: VEPSSGGDTAVRCRATPRIRERD*WELKVR Trigger: TCGCACCTTCAGCTCCCATCAGTCTCGCTCACGGAT...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGGTCTTCACCAGCAGGTaGTGCACATCCCTCCAGGTC | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGVFTSR*CTSLQV Trigger: GACCTGGAGGGATGTGCAGCACCTGCTGGTGAAGAC...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGGTGGTCCGTAGCACCTaGACTATGGGGATGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGVVRST*TMGMLL Trigger: CAGGAGCATCCCCATAGTGCAGGTGCTACGGACCAC...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CCA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGTTTAGCCAGCCGGCCTaGTCCATCTACTGTCTTTCC | + |
Preference number: 4 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRFSQPA*SIYCLS Trigger: GGAAAGACAGTAGATGGACCAGGCCGGCTGGCTAAA...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCACACAGTTCAAGCACTaGTCTGCATTGGGACCATCA | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLTQFKH*SALGPS Trigger: TGATGGTCCCAATGCAGACCAGTGCTTGAACTGTGT...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGCTTCGACACACTTTGTaGGGTAAGCCAGGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRLRHTL*GKPGIS Trigger: GGAGATGCCTGGCTTACCCCACAAAGTGTGTCGAAG...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGGCCCCGGCGTGGGTGTaGGATAGAGATTCGGACAAC | + |
Preference number: 4 (lower is better) Translates to: LRATSTCSGAQRCCSRTQAPAWV*DRDSDN Trigger: GTTGTCCGAATCTCTATCTCACACCCACGCCGGGGC...CTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCCGGTGCCATATAAAATaGGGCTCCATTCTTTCAGCT | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLRCHIK*GSILSA Trigger: AGCTGAAAGAATGGAGCCTCATTTTATATGGCACCG...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGGGGCCGCCCAGCACTTaGACTGCCCAGTGGTTGGTG | + |
Preference number: 4 (lower is better) Translates to: DKHITVREESRTMWRETRGPPST*TAQWLV Trigger: CACCAACCACTGGGCAGTGCAAGTGCTGGGCGGCCC...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATGGGCCGCCCAGCACTTaGACTGCCCAGTGGTTGGTG | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNGPPST*TAQWLV Trigger: CACCAACCACTGGGCAGTGCAAGTGCTGGGCGGCCC...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCTTGCATTATATGCGATaGCCACGATGCAGTAGGAGT | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLLHYMR*PRCSRS Trigger: ACTCCTACTGCATCGTGGGCATCGCATATAATGCAA...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCGTTCTCAGTGGTGCTaGTTACGGAGATGGTGTAGA | + |
Preference number: 4 (lower is better) Translates to: CPSGCLVASDAQGGSEALRSQWC*LRRWCR Trigger: TCTACACCATCTCCGTAAGCAGCACCACTGAGAACG...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGACTGTGCTGGGCTCCTaGCCGTGCACGTCTCACATC | + |
Preference number: 4 (lower is better) Translates to: LRATSTCSGAQRCCSRTQTVLGS*PCTSHI Trigger: GATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGT...CTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAGTTCACAGTCCGGAATaGAGCTGCCCCGTGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGEVHSPE*SCPVPG Trigger: GCCTGGCACGGGGCAGCTGCATTCCGGACTGTGAAC...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGGTTGGGGGCCAGGTCTaGGTGATTCCTTTCTATGCC | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGVGGQV*VIPFYA Trigger: GGCATAGAAAGGAATCACCCAGACCTGGCCCCCAAC...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGCTGGACGTTCATCTCTaGCCGACAGCGACTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: VEPSSGGDTAVRCRATPRLDVHL*PTATVL Trigger: AAGAACAGTCGCTGTCGGTCAGAGATGAACGTCCAG...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGCAATGTAGTTGGGTCTaGTGCCCAGAGACTTGGCCT | + |
Preference number: 4 (lower is better) Translates to: VEPSSGGDTAVRCRATPRQCSWV*CPETWP Trigger: AGGCCAAGTCTCTGGGCATCAGACCCAACTACATTG...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCGTCCAGCATCCGGATaGCTCCTATCTTTGCATTAT | + |
Preference number: 4 (lower is better) Translates to: CPSGCLVASDAQGGSEALRPASG*LLSLHY Trigger: ATAATGCAAAGATAGGAGGCATCCGGATGCTGGACG...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGCAGTGTGGCCGTCGGTaGAGCGCTGACGCAGATCTG | + |
Preference number: 4 (lower is better) Translates to: DKHITVREESRTMWRETRQCGRR*SADADL Trigger: CAGATCTGCGTCAGCGCTGCACCGACGGCCACACTG...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGCAGGACCAGAGCTTCTaGATCCACCAAGCCAAATCC | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGQDQSF*IHQAKS Trigger: GGATTTGGCTTGGTGGATGCAGAAGCTCTGGTCCTG...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAACCTGGGCCTTTTGTCTaGGGTGGCCACGCATACGTG | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGEPGPFV*GGHAYV Trigger: CACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGG...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGATTCGGACAACCACATaGTCCAGGTACACCACACGC | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGIRTTT*SRYTTR Trigger: GCGTGTGGTGTACCTGGAGCATGTGGTTGTCCGAAT...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGGTCTTCTGGAGTCTCTaGCTGGGGTGGTTGTCCAGC | + |
Preference number: 4 (lower is better) Translates to: LRATSTCSGAQRCCSRTQVFWSL*LGWLSS Trigger: GCTGGACAACCACCCCAGGCAGAGACTCCAGAAGAC...CTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGCATAGGAATCGTAGTTaGGGGCCAGGTCTGGGTGAT | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGHRNRS*GPGLGD Trigger: ATCACCCAGACCTGGCCCCCAACTACGATTCCTATG...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCTTCCCCAGGCTGAAGTaGACACAGTTCAAGCACTGG | + |
Preference number: 4 (lower is better) Translates to: CSRTQLWGRYSCQMQGYPFPRLK*TQFKHW Trigger: CCAGTGCTTGAACTGTGTCCACTTCAGCCTGGGGAA...GGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATAGACAGGCACTGTGCTaGGCTCCTGCCCGTGCACGT | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNRQALC*APARAR Trigger: ACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCT...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGGCATTGCTGCACGTGTaGTTGGTGATGCAGGAGGTT | + |
Preference number: 4 (lower is better) Translates to: VEPSSGGDTAVRCRATPRALLHV*LVMQEV Trigger: AACCTCCTGCATCACCAACCACACGTGCAGCAATGC...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATGAGCTCCAGCATCCGTaGGCGAGACTGATGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNELQHP*ARLMGA Trigger: AGCTCCCATCAGTCTCGCTCACGGATGCTGGAGCTC...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCTTCACTTCCTGTTGTTaGAGCCATTTTACCTGTGGG | + |
Preference number: 4 (lower is better) Translates to: PPAVWWPVMHREEARPFIFTSCC*SHFTCG Trigger: CCCACAGGTAAAATGGCTGCAACAACAGGAAGTGAA...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAGTCTTCACCAGCAGGTaGTGCACATCCCTCCAGGTC | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGEVFTSR*CTSLQV Trigger: GACCTGGAGGGATGTGCAGCACCTGCTGGTGAAGAC...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATACTGTGCTGGGCTCCTaGCCGTGCACGTCTCACATC | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNTVLGS*PCTSHI Trigger: GATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGT...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTATTCTGAGGAAGGTGTaGGGGCCCCTGCTGCTCAAG | + |
Preference number: 4 (lower is better) Translates to: GAAVSEGADCVDIDSLSSILRKV*GPLLLK Trigger: CTTGAGCAGCAGGGGCCCCCACACCTTCCTCAGAAT...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCGTCATATCTCGGGGATaGGTCATAATCATTTCCATT | + |
Preference number: 4 (lower is better) Translates to: GPGGPRDTGRTAMWTARLVISRG*VIIISI Trigger: AATGGAAATGATTATGACCCATCCCCGAGATATGAC...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR CCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAACCATCACAGGAGCAGTaGTCCCCTTCTCTCCCACCA | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGEPSQEQ*SPSLPP Trigger: TGGTGGGAGAGAAGGGGACCACTGCTCCTGTGATGG...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR CCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGTCCCTCCAGGTCAACTaGTTGTTTGCTTCTAGAGCC | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGSLQVN*LFASRA Trigger: GGCTCTAGAAGCAAACAACCAGTTGACCTGGAGGGA...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
||
3UTR CAA 72 bp | TTATTTACAGTCCGATCAAACTGTCCCTCCGGCTGTTaGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCC | + |
Preference number: 4 (lower is better) Translates to: LFTVRSNCPSGC*VASDAQGGSEA Trigger: GGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACAGTTTGATCGGACTGTAAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR TCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAATTCGCGCCTGTCTCTTaGCTCTGCGCTTCACTTCCT | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGEFAPVS*LCASLP Trigger: AGGAAGTGAAGCGCAGAGTCAAGAGACAGGCGCGAA...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR TCA 90 bp | CCTTGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGGAGAGCAGGCCCCGGCGTGGGTGTaGGATAGAGATTCGGACAAC | + |
Preference number: 4 (lower is better) Translates to: PCHLQVTRQTHYSQRGEQAPAWV*DRDSDN Trigger: GTTGTCCGAATCTCTATCTCACACCCACGCCGGGGC...CTGCTCTCCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR TCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATCAGGTCCGGCAGGTGTaGTGGCATTCCCCACATTTG | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNQVRQV*WHSPHL Trigger: CAAATGTGGGGAATGCCATCACACCTGCCGGACCTG...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR GCA 90 bp | CCTTGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGGAGAGCAGCCTGGGCCTTTTGTCTaGGGTGGCCACGCATACGTG | + |
Preference number: 4 (lower is better) Translates to: PCHLQVTRQTHYSQRGEQPGPFV*GGHAYV Trigger: CACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGG...CTGCTCTCCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
||
CDS-3UTR GCA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTGAATACACTCTTCTCTaGTGGGCCCCACACAGGTCC | + |
Preference number: 4 (lower is better) Translates to: GAAVSEGADCVDIDSLSSEYTLL*WAPHRS Trigger: GGACCTGTGTGGGGCCCAGCAGAGAAGAGTGTATTC...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR GCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAGAATACACTCTTCTCTaGTGGGCCCCACACAGGTCC | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGEEYTLL*WAPHRS Trigger: GGACCTGTGTGGGGCCCAGCAGAGAAGAGTGTATTC...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR CCA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTAGGTACCAGGGTTTGTaGCCGTTCTCAGTGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: GAAVSEGADCVDIDSLSSRYQGL*PFSVVL Trigger: CAGCACCACTGAGAACGGCCACAAACCCTGGTACCT...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR CCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGCGTTGGTCAGGGCTGTaGTCCGTAGCACCTGCACTA | + |
Preference number: 4 (lower is better) Translates to: DKHITVREESRTMWRETRRWSGL*SVAPAL Trigger: TAGTGCAGGTGCTACGGACCACAGCCCTGACCAACG...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGTCTGGAGTCTCTGCCTaGGGTGGTTGTCCAGCAGCC | + |
Preference number: 4 (lower is better) Translates to: HPPKNRESRVQRPNTLEKSGVSA*GGCPAA Trigger: GGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGA...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR CCA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGGTATTAGGAGAGCCTTaGATGGAAGGAGCTGTGTAC | + |
Preference number: 4 (lower is better) Translates to: VEPSSGGDTAVRCRATPRVLGEP*MEGAVY Trigger: GTACACAGCTCCTTCCATCCAAGGCTCTCCTAATAC...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCGTATTAGGAGAGCCTTaGATGGAAGGAGCTGTGTAC | + |
Preference number: 4 (lower is better) Translates to: CSRTQLWGRYSCQMQGYPVLGEP*MEGAVY Trigger: GTACACAGCTCCTTCCATCCAAGGCTCTCCTAATAC...GGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
||
CDS-3UTR CCA 90 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGGTTCGCAGAGCCGATTaGACTTCACCATCTCGCAGA | + |
Preference number: 4 (lower is better) Translates to: LRATSTCSGAQRCCSRTQVRRAD*TSPSRR Trigger: TCTGCGAGATGGTGAAGTCCAATCGGCTCTGCGAAC...CTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CAA 72 bp | AGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTaGAAAAGCAGTTGTGTGCCATGGAGGGCTGGCGAC | + |
Preference number: 4 (lower is better) Translates to: RTESPECRGQIH*KSSCVPWRAGD Trigger: GTCGCCAGCCCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR TCA 90 bp | CCTTGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGGAGAGCAGTATGCCCAGCTCCGTTaGCTTTCCAGTCGCTCGCCT | + |
Preference number: 4 (lower is better) Translates to: PCHLQVTRQTHYSQRGEQYAQLR*LSSRSP Trigger: AGGCGAGCGACTGGAAAGTCAACGGAGCTGGGCATA...CTGCTCTCCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | TGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCTTGCATTATATGCGATaGCCACGATGCAGTAGGAGT | + |
Preference number: 4 (lower is better) Translates to: CSRTQLWGRYSCQMQGYPLHYMR*PRCSRS Trigger: ACTCCTACTGCATCGTGGGCATCGCATATAATGCAA...GGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR GCA 90 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCGTTCTCAGTGGTGCTaGTTACGGAGATGGTGTAGA | + |
Preference number: 4 (lower is better) Translates to: LRATSTCSGAQRCCSRTQRSQWC*LRRWCR Trigger: TCTACACCATCTCCGTAAGCAGCACCACTGAGAACG...CTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATGCAGCGTCTTGCAGCTaGATCCCCAAAGTAGCCCAA | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNAASCS*IPKVAQ Trigger: TTGGGCTACTTTGGGGATGCAGCTGCAAGACGCTGC...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | CCTTGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGGAGAGCAGAATGCAGCTGCCCCGTaGCAGGCTGAATCCCTCCTT | + |
Preference number: 4 (lower is better) Translates to: PCHLQVTRQTHYSQRGEQNAAAP*QAESLL Trigger: AAGGAGGGATTCAGCCTGGCACGGGGCAGCTGCATT...CTGCTCTCCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTCGGCTTTACATCTGCTaGAGTTCCTACTGGAGCCCT | + |
Preference number: 4 (lower is better) Translates to: GAAVSEGADCVDIDSLSSRLYIC*SSYWSP Trigger: AGGGCTCCAGTAGGAACTGCAGCAGATGTAAAGCCG...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCGTCATATCTCGGGGATaGGTCATAATCATTTCCATT | + |
Preference number: 4 (lower is better) Translates to: PPAVWWPVMHREEARPFIVISRG*VIIISI Trigger: AATGGAAATGATTATGACCCATCCCCGAGATATGAC...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAATTTAGCCAGCCGGCCTaGTCCATCTACTGTCTTTCC | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGEFSQPA*SIYCLS Trigger: GGAAAGACAGTAGATGGACCAGGCCGGCTGGCTAAA...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCGTTGGTCAGGGCTGTaGTCCGTAGCACCTGCACTA | + |
Preference number: 4 (lower is better) Translates to: HPPKNRESRVQRPNTLEKRWSGL*SVAPAL Trigger: TAGTGCAGGTGCTACGGACCACAGCCCTGACCAACG...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CCTTGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGGAGAGCAGCGTTGGTCAGGGCTGTaGTCCGTAGCACCTGCACTA | + |
Preference number: 4 (lower is better) Translates to: PCHLQVTRQTHYSQRGEQRWSGL*SVAPAL Trigger: TAGTGCAGGTGCTACGGACCACAGCCCTGACCAACG...CTGCTCTCCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGGAGGGAGAAATCAGGTaGATCTGGAGATCGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: HPPKNRESRVQRPNTLEKEGEIR*IWRSPR Trigger: CCGGGGCGATCTCCAGATCCACCTGATTTCTCCCTC...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGGTTGTCCAGCAGCCTTaGGAGGCTCCTGCTCCGGGA | + |
Preference number: 4 (lower is better) Translates to: WRETRLGKFKASVIPLAQVVQQP*EAPAPG Trigger: TCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAAC...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCGTTGTCCAGCAGCCTTaGGAGGCTCCTGCTCCGGGA | + |
Preference number: 4 (lower is better) Translates to: GRKINPALSCRLVPYWTSVVQQP*EAPAPG Trigger: TCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAAC...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCTCTTCCTCGTCTTCTaGAGTCTCTGCCTGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: HPPKNRESRVQRPNTLEKLFLVF*SLCLGW Trigger: CCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAG...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTTTCCCCAGGCTGAAGTaGACACAGTTCAAGCACTGG | + |
Preference number: 4 (lower is better) Translates to: GAAVSEGADCVDIDSLSSFPRLK*TQFKHW Trigger: CCAGTGCTTGAACTGTGTCCACTTCAGCCTGGGGAA...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CAA 72 bp | TCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCAGTaGTGTGCCATGGAGGGCTGGCGACTAGTGATTCAG | + |
Preference number: 4 (lower is better) Translates to: SRVQRPNTLEKQ*CAMEGWRLVIQ Trigger: CTGAATCACTAGTCGCCAGCCCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTCAATCTGGCCCAAGTTaGGGTAGCCGTGCGCCGCAG | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFQSGPS*GSRAPQ Trigger: CTGCGGCGCACGGCTACCTCAACTTGGGCCAGATTG...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR TCA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCACCAAATGGGATCATTaGAATAAAGAGAGTCACTTC | + |
Preference number: 4 (lower is better) Translates to: PPAVWWPVMHREEARPFITKWDH*NKESHF Trigger: GAAGTGACTCTCTTTATTTCAATGATCCCATTTGGT...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGACCAAATGGGATCATTaGAATAAAGAGAGTCACTTC | + |
Preference number: 4 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRTKWDH*NKESHF Trigger: GAAGTGACTCTCTTTATTTCAATGATCCCATTTGGT...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGGCCCCGGCGTGGGTGTaGGATAGAGATTCGGACAAC | + |
Preference number: 4 (lower is better) Translates to: WRETRLGKFKASVIPLAQAPAWV*DRDSDN Trigger: GTTGTCCGAATCTCTATCTCACACCCACGCCGGGGC...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTTTGCCAAAAGTTaGGACTTGGTTCCAGAGGGA | + |
Preference number: 4 (lower is better) Translates to: LRATSTCSGAQRCCSRTQLFAKS*DLVPEG Trigger: TCCCTCTGGAACCAAGTCTCAACTTTTGGCAAAGAG...CTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGGGCCGTTCTCAGTGGTaGTGCTTACGGAGATGGTGT | + |
Preference number: 4 (lower is better) Translates to: HPPKNRESRVQRPNTLEKGRSQW*CLRRWC Trigger: ACACCATCTCCGTAAGCAGCACCACTGAGAACGGCC...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGATTCGGACAACCACATaGTCCAGGTACACCACACGC | + |
Preference number: 4 (lower is better) Translates to: DKHITVREESRTMWRETRIRTTT*SRYTTR Trigger: GCGTGTGGTGTACCTGGAGCATGTGGTTGTCCGAAT...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATATTCGGACAACCACATaGTCCAGGTACACCACACGC | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNIRTTT*SRYTTR Trigger: GCGTGTGGTGTACCTGGAGCATGTGGTTGTCCGAAT...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTCCTGCACTATGGGGATaGTCTTTGCTTCTAGAGCCA | + |
Preference number: 4 (lower is better) Translates to: GAAVSEGADCVDIDSLSSPALWG*SLLLEP Trigger: TGGCTCTAGAAGCAAAGAGCATCCCCATAGTGCAGG...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176209.2 |
||
CDS-3UTR CCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATAGGCCCAAACAAAAATaGAGCCCAGACCTTGGCGAC | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNRPKQK*SPDLGD Trigger: GTCGCCAAGGTCTGGGCTCCATTTTTGTTTGGGCCT...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGCTTCGACACACTTTGTaGGGTAAGCCAGGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: DKHITVREESRTMWRETRLRHTL*GKPGIS Trigger: GGAGATGCCTGGCTTACCCCACAAAGTGTGTCGAAG...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATGTTCGCAGAGCCGATTaGACTTCACCATCTCGCAGA | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNVRRAD*TSPSRR Trigger: TCTGCGAGATGGTGAAGTCCAATCGGCTCTGCGAAC...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATTCACCACACTCGGGATaGCACACACCTGTGTACTCT | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNSPHSG*HTPVYS Trigger: AGAGTACACAGGTGTGTGCCATCCCGAGTGTGGTGA...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098391.11 |
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CDS-3UTR TCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCCTAGAGCCAAGGCAATaGTACCAGCCACCATGGGGG | + |
Preference number: 4 (lower is better) Translates to: GRKINPALSCRLVPYWTSLEPRQ*YQPPWG Trigger: CCCCCATGGTGGCTGGTATCATTGCCTTGGCTCTAG...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAACTCTTTGCCAAAAGTTaGGACTTGGTTCCAGAGGGA | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGELFAKS*DLVPEG Trigger: TCCCTCTGGAACCAAGTCTCAACTTTTGGCAAAGAG...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCATCCGTGAGCGAGACTaGTGGGAGCTGAAGGTGCGA | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTIRERD*WELKVR Trigger: TCGCACCTTCAGCTCCCATCAGTCTCGCTCACGGAT...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | ACCATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGAGCTCCAGCATCCGTaGGCGAGACTGATGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: TMWRETRLGKFKASVIPLELQHP*ARLMGA Trigger: AGCTCCCATCAGTCTCGCTCACGGATGCTGGAGCTC...TAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGATCCAGCAATCTCTTTaGCAAAAGTTGAGACTTGGT | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGIQQSL*QKLRLG Trigger: ACCAAGTCTCAACTTTTGGCAAAGAGATTGCTGGAT...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGATCCAGCAATCTCTTTaGCAAAAGTTGAGACTTGGT | + |
Preference number: 4 (lower is better) Translates to: VEPSSGGDTAVRCRATPRIQQSL*QKLRLG Trigger: ACCAAGTCTCAACTTTTGGCAAAGAGATTGCTGGAT...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | AGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCAGTTGTGTGCCATGGAGGTGCGATGGTATATCCTaGACTTCCAGAGTCCACTCC | + |
Preference number: 4 (lower is better) Translates to: SPECRGQIHLKSSCVPWRCDGIS*TSRVHS Trigger: GGAGTGGACTCTGGAAGTGCAGGATATACCATCGCA...CCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGGTCTTCTGGAGTCTCTaGCTGGGGTGGTTGTCCAGC | + |
Preference number: 4 (lower is better) Translates to: WRETRLGKFKASVIPLAQVFWSL*LGWLSS Trigger: GCTGGACAACCACCCCAGGCAGAGACTCCAGAAGAC...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAACCTCCTTACACACAGTaGACTTCTCAGGTTCATCCA | + |
Preference number: 4 (lower is better) Translates to: HYSQRGEQDHVERDEVGEPPYTQ*TSQVHP Trigger: TGGATGAACCTGAGAAGTGCACTGTGTGTAAGGAGG...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCAATGCAGCTGCCCCGTaGCAGGCTGAATCCCTCCTT | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTNAAAP*QAESLL Trigger: AAGGAGGGATTCAGCCTGGCACGGGGCAGCTGCATT...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGAGGCCCAAACAAAAATaGAGCCCAGACCTTGGCGAC | + |
Preference number: 4 (lower is better) Translates to: HPPKNRESRVQRPNTLEKRPKQK*SPDLGD Trigger: GTCGCCAAGGTCTGGGCTCCATTTTTGTTTGGGCCT...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCCCATCACAGGAGCAGTaGTCCCCTTCTCTCCCACCA | + |
Preference number: 4 (lower is better) Translates to: GRKINPALSCRLVPYWTSPSQEQ*SPSLPP Trigger: TGGTGGGAGAGAAGGGGACCACTGCTCCTGTGATGG...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTCCCTCCAGGTCAACTaGTTGTTTGCTTCTAGAGCC | + |
Preference number: 4 (lower is better) Translates to: DKHITVREESRTMWRETRSLQVN*LFASRA Trigger: GGCTCTAGAAGCAAACAACCAGTTGACCTGGAGGGA...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCCTATGGGGATGCTCCTaGGCCTTTTGTCTGCGGTGG | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTLWGCS*AFCLRW Trigger: CCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAG...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTTCTGGAGTCTCTGCCTaGGGTGGTTGTCCAGCAGCC | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFSGVSA*GGCPAA Trigger: GGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGA...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATTCACCACACTCGGGATaGCACACACTGGTCTGTAAA | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNSPHSG*HTLVCK Trigger: TTTACAGACCAGTGTGTGCCATCCCGAGTGTGGTGA...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAAGACAGGCACTGTGCTaGGCTCCTGCCCGTGCACGT | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPRQALC*APARAR Trigger: ACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCT...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGGTGCGGCAGCAAAACTaGATGAAGAGCTTCCGTTCG | + |
Preference number: 4 (lower is better) Translates to: HPPKNRESRVQRPNTLEKVRQQN*MKSFRS Trigger: CGAACGGAAGCTCTTCATCCAGTTTTGCTGCCGCAC...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGCTCTTTGCCAAAAGTTaGGACTTGGTTCCAGAGGGA | + |
Preference number: 4 (lower is better) Translates to: DKHITVREESRTMWRETRLFAKS*DLVPEG Trigger: TCCCTCTGGAACCAAGTCTCAACTTTTGGCAAAGAG...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCTCATCCACGCACTTCTaGCAGCTCGGGTGGCACCTG | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFSSTHF*QLGWHL Trigger: CAGGTGCCACCCGAGCTGTCAGAAGTGCGTGGATGA...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGGTCCGGCAGGTGTaGTGGCATTCCCCACATTTG | + |
Preference number: 4 (lower is better) Translates to: MWRETRLGKFKASVIPLAQVRQV*WHSPHL Trigger: CAAATGTGGGGAATGCCATCACACCTGCCGGACCTG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCAGGTTCCCAGCTGTGTaGAGCCGGCTTTACATCTGC | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTRFPAV*SRLYIC Trigger: GCAGATGTAAAGCCGGCTTCACACAGCTGGGAACCT...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGATGCGATGCCCACGATaGAGTAGGAGTTGTTGGCCG | + |
Preference number: 4 (lower is better) Translates to: WRETRLGKFKASVIPLAQMRCPR*SRSCWP Trigger: CGGCCAACAACTCCTACTGCATCGTGGGCATCGCAT...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTGTGGTCCGTAGCACCTaGACTATGGGGATGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: MWRETRLGKFKASVIPLAVVRST*TMGMLL Trigger: CAGGAGCATCCCCATAGTGCAGGTGCTACGGACCAC...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTAATGCAGCTGCCCCGTaGCAGGCTGAATCCCTCCTT | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFNAAAP*QAESLL Trigger: AAGGAGGGATTCAGCCTGGCACGGGGCAGCTGCATT...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCGAATACACTCTTCTCTaGTGGGCCCCACACAGGTCC | + |
Preference number: 4 (lower is better) Translates to: GRKINPALSCRLVPYWTSEYTLL*WAPHRS Trigger: GGACCTGTGTGGGGCCCAGCAGAGAAGAGTGTATTC...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGGTTGGGGGCCAGGTCTaGGTGATTCCTTTCTATGCC | + |
Preference number: 4 (lower is better) Translates to: WRETRLGKFKASVIPLAQVGGQV*VIPFYA Trigger: GGCATAGAAAGGAATCACCCAGACCTGGCCCCCAAC...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTGAGGGAGAAATCAGGTaGATCTGGAGATCGCCCCGG | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFEGEIR*IWRSPR Trigger: CCGGGGCGATCTCCAGATCCACCTGATTTCTCCCTC...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCATACACTCTTCTCTGCTaGGCCCCACACAGGTCCGGC | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPYTLLC*APHRSG Trigger: GCCGGACCTGTGTGGGGCCCAGCAGAGAAGAGTGTA...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCCAGGTCCGGCAGGTGTaGTGGCATTCCCCACATTTG | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFQVRQV*WHSPHL Trigger: CAAATGTGGGGAATGCCATCACACCTGCCGGACCTG...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCGGCAGCAAAACTGGATaGAGAGCTTCCGTTCGCAGA | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTGSKTG*RASVRR Trigger: TCTGCGAACGGAAGCTCTTCATCCAGTTTTGCTGCC...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCGGCAGCAAAACTGGATaGAGAGCTTCCGTTCGCAGA | + |
Preference number: 4 (lower is better) Translates to: GRKINPALSCRLVPYWTSGSKTG*RASVRR Trigger: TCTGCGAACGGAAGCTCTTCATCCAGTTTTGCTGCC...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | AGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCAGTTGTGTGCCATGGAGGTTCACTTCCTGTTGTTaGAGCCATTTTACCTGTGGG | + |
Preference number: 4 (lower is better) Translates to: SPECRGQIHLKSSCVPWRFTSCC*SHFTCG Trigger: CCCACAGGTAAAATGGCTGCAACAACAGGAAGTGAA...CCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGGGGGTTCTTATCAGTACAATaGATGTACCACATGTTAGAC | + |
Preference number: 4 (lower is better) Translates to: TSTCSGAQRCCSRTQLWGFLSVQ*MYHMLD Trigger: GTCTAACATGTGGTACATGCATTGTACTGATAAGAA...CCCCCAGAGCTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTATGCGATGCCCACGATaGAGTAGGAGTTGTTGGCCG | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFMRCPR*SRSCWP Trigger: CGGCCAACAACTCCTACTGCATCGTGGGCATCGCAT...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ACCATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAATGCGATGCCCACGATaGAGTAGGAGTTGTTGGCCG | + |
Preference number: 4 (lower is better) Translates to: TMWRETRLGKFKASVIPLMRCPR*SRSCWP Trigger: CGGCCAACAACTCCTACTGCATCGTGGGCATCGCAT...TAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATTTGCATTATATGCGATaGCCACGATGCAGTAGGAGT | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNLHYMR*PRCSRS Trigger: ACTCCTACTGCATCGTGGGCATCGCATATAATGCAA...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTGGCCGTTCTCAGTGGTaGTGCTTACGGAGATGGTGT | + |
Preference number: 4 (lower is better) Translates to: MWRETRLGKFKASVIPLAGRSQW*CLRRWC Trigger: ACACCATCTCCGTAAGCAGCACCACTGAGAACGGCC...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR GCA 90 bp | ACCATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGGCCGTTCTCAGTGGTaGTGCTTACGGAGATGGTGT | + |
Preference number: 4 (lower is better) Translates to: TMWRETRLGKFKASVIPLGRSQW*CLRRWC Trigger: ACACCATCTCCGTAAGCAGCACCACTGAGAACGGCC...TAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR GCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTTTCACCAGCAGGTGCTaGACATCCCTCCAGGTCAAC | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFFTSRC*TSLQVN Trigger: GTTGACCTGGAGGGATGTGCAGCACCTGCTGGTGAA...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR GCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCCAGGACCAGAGCTTCTaGATCCACCAAGCCAAATCC | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTQDQSF*IHQAKS Trigger: GGATTTGGCTTGGTGGATGCAGAAGCTCTGGTCCTG...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
||
CDS-3UTR GCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCGTCTTCTGGAGTCTCTaGCTGGGGTGGTTGTCCAGC | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFVFWSL*LGWLSS Trigger: GCTGGACAACCACCCCAGGCAGAGACTCCAGAAGAC...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCCGGCTTTACATCTGCTaGAGTTCCTACTGGAGCCCT | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTRLYIC*SSYWSP Trigger: AGGGCTCCAGTAGGAACTGCAGCAGATGTAAAGCCG...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAATTCTGAGGAAGGTGTaGGGGCCCCTGCTGCTCAAG | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPILRKV*GPLLLK Trigger: CTTGAGCAGCAGGGGCCCCCACACCTTCCTCAGAAT...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTGTTGGGGGCCAGGTCTaGGTGATTCCTTTCTATGCC | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFVGGQV*VIPFYA Trigger: GGCATAGAAAGGAATCACCCAGACCTGGCCCCCAAC...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
||
CDS-3UTR CCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTGTAGCACCTGCACTATaGGGATGCTCCTGGGCCTTT | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFVAPAL*GCSWAF Trigger: AAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTAC...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCTTCCCCAGGCTGAAGTaGACACAGTTCAAGCACTGG | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTFPRLK*TQFKHW Trigger: CCAGTGCTTGAACTGTGTCCACTTCAGCCTGGGGAA...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCGCATTGCTGCACGTGTaGTTGGTGATGCAGGAGGTT | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTALLHV*LVMQEV Trigger: AACCTCCTGCATCACCAACCACACGTGCAGCAATGC...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCGTGCGGCAGCAAAACTaGATGAAGAGCTTCCGTTCG | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTVRQQN*MKSFRS Trigger: CGAACGGAAGCTCTTCATCCAGTTTTGCTGCCGCAC...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGGTAGCACCTGCACTATaGGGATGCTCTTTGCTTCTA | + |
Preference number: 4 (lower is better) Translates to: HPPKNRESRVQRPNTLEKVAPAL*GCSLLL Trigger: TAGAAGCAAAGAGCATCCCCATAGTGCAGGTGCTAC...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176209.2 |
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3UTR CAA 72 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTaGTACCATACTGGACCAGCGCAGCATCCACCCAAG | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVG*YHTGPAQHPPK Trigger: CTTGGGTGGATGCTGCGCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCTTCGCGCCTGTCTCTTaGCTCTGCGCTTCACTTCCT | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFFAPVS*LCASLP Trigger: AGGAAGTGAAGCGCAGAGTCAAGAGACAGGCGCGAA...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCTGGACGTTCATCTCTaGCCGACAGCGACTGTTCTT | + |
Preference number: 4 (lower is better) Translates to: MWRETRLGKFKASVIPLALDVHL*PTATVL Trigger: AAGAACAGTCGCTGTCGGTCAGAGATGAACGTCCAG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAAGGTTCCCAGCTGTGTaGAGCCGGCTTTACATCTGC | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPRFPAV*SRLYIC Trigger: GCAGATGTAAAGCCGGCTTCACACAGCTGGGAACCT...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTGGCAGCAAAACTGGATaGAGAGCTTCCGTTCGCAGA | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFGSKTG*RASVRR Trigger: TCTGCGAACGGAAGCTCTTCATCCAGTTTTGCTGCC...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCAGCGTCTTGCAGCTaGATCCCCAAAGTAGCCCAA | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPAASCS*IPKVAQ Trigger: TTGGGCTACTTTGGGGATGCAGCTGCAAGACGCTGC...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTGTTCACAGTCCGGAATaGAGCTGCCCCGTGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSVHSPE*SCPVPG Trigger: GCCTGGCACGGGGCAGCTGCATTCCGGACTGTGAAC...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTGAAGTGGAAGCTTTTTaGACAGTGAATACACTCTTC | + |
Preference number: 4 (lower is better) Translates to: GAAVSEGADCVDIDSLSSEVEAF*TVNTLF Trigger: GAAGAGTGTATTCACTGTGCAAAAAGCTTCCACTTC...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ACCATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTACATAGGAATCGTAGTTaGGGGCCAGGTCTGGGTGAT | + |
Preference number: 4 (lower is better) Translates to: TMWRETRLGKFKASVIPLHRNRS*GPGLGD Trigger: ATCACCCAGACCTGGCCCCCAACTACGATTCCTATG...TAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCATAGGAATCGTAGTTaGGGGCCAGGTCTGGGTGAT | + |
Preference number: 4 (lower is better) Translates to: MWRETRLGKFKASVIPLAHRNRS*GPGLGD Trigger: ATCACCCAGACCTGGCCCCCAACTACGATTCCTATG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAGGTACCAGGGTTTGTaGCCGTTCTCAGTGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFRYQGL*PFSVVL Trigger: CAGCACCACTGAGAACGGCCACAAACCCTGGTACCT...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCCTTTCCTTGTTTCTCTaGGTTTCGGACCTGCGATGG | + |
Preference number: 4 (lower is better) Translates to: VQGDFCQFSHISLRATSTLSLFL*VSDLRW Trigger: CCATCGCAGGTCCGAAACCCAGAGAAACAAGGAAAG...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGCTTTCCTTGTTTCTCTaGGTTTCGGACCTGCGATGG | + |
Preference number: 4 (lower is better) Translates to: WRETRLGKFKASVIPLAQLSLFL*VSDLRW Trigger: CCATCGCAGGTCCGAAACCCAGAGAAACAAGGAAAG...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTGTTCGCAGAGCCGATTaGACTTCACCATCTCGCAGA | + |
Preference number: 4 (lower is better) Translates to: MWRETRLGKFKASVIPLAVRRAD*TSPSRR Trigger: TCTGCGAGATGGTGAAGTCCAATCGGCTCTGCGAAC...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCGTTCAAGCACTGGTCTaGATTGGGACCATCACAGCC | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFVQALV*IGTITA Trigger: GGCTGTGATGGTCCCAATGCAGACCAGTGCTTGAAC...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGTTCAAGCACTGGTCTaGATTGGGACCATCACAGCC | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPVQALV*IGTITA Trigger: GGCTGTGATGGTCCCAATGCAGACCAGTGCTTGAAC...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATGAAGTGGAAGCTTTTTaGACAGTGAATACACTCTTC | + |
Preference number: 4 (lower is better) Translates to: LQSERRAGPCGERRGWGNEVEAF*TVNTLF Trigger: GAAGAGTGTATTCACTGTGCAAAAAGCTTCCACTTC...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCTTTAGCCAGCCGGCCTaGTCCATCTACTGTCTTTCC | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFFSQPA*SIYCLS Trigger: GGAAAGACAGTAGATGGACCAGGCCGGCTGGCTAAA...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAAGGCCCAAACAAAAATaGAGCCCAGACCTTGGCGAC | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPRPKQK*SPDLGD Trigger: GTCGCCAAGGTCTGGGCTCCATTTTTGTTTGGGCCT...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTCTTTCCTTGTTTCTCTaGGTTTCGGACCTGCGATGG | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFLSLFL*VSDLRW Trigger: CCATCGCAGGTCCGAAACCCAGAGAAACAAGGAAAG...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTAGCACTGGTCTGCATTaGGACCATCACAGCCTTTGT | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFSTGLH*DHHSLC Trigger: ACAAAGGCTGTGATGGTCCCAATGCAGACCAGTGCT...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ACCATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAAGCACTGGTCTGCATTaGGACCATCACAGCCTTTGT | + |
Preference number: 4 (lower is better) Translates to: TMWRETRLGKFKASVIPLSTGLH*DHHSLC Trigger: ACAAAGGCTGTGATGGTCCCAATGCAGACCAGTGCT...TAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGACACAGTTCAAGCACTaGTCTGCATTGGGACCATCA | + |
Preference number: 4 (lower is better) Translates to: WRETRLGKFKASVIPLAQTQFKH*SALGPS Trigger: TGATGGTCCCAATGCAGACCAGTGCTTGAACTGTGT...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGACACATTTCCAGTCTTaGAAGTGGAAGCTTTTTGCA | + |
Preference number: 4 (lower is better) Translates to: DKHITVREESRTMWRETRTHFQS*KWKLFA Trigger: TGCAAAAAGCTTCCACTTCCAAGACTGGAAATGTGT...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCCTTCGACACACTTTGTaGGGTAAGCCAGGCATCTCC | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFLRHTL*GKPGIS Trigger: GGAGATGCCTGGCTTACCCCACAAAGTGTGTCGAAG...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTCTAGAGCCAAGGCAATaGTACCAGCCACCATGGGGG | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSLEPRQ*YQPPWG Trigger: CCCCCATGGTGGCTGGTATCATTGCCTTGGCTCTAG...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCGTCCAGCATCCGGATaGCTCCTATCTTTGCATTAT | + |
Preference number: 4 (lower is better) Translates to: MWRETRLGKFKASVIPLARPASG*LLSLHY Trigger: ATAATGCAAAGATAGGAGGCATCCGGATGCTGGACG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCATGCGATGGTATATCCTaGACTTCCAGAGTCCACTCC | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPCDGIS*TSRVHS Trigger: GGAGTGGACTCTGGAAGTGCAGGATATACCATCGCA...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGGAAGTGGAAGCTTTTTaGACAGTGAATACACTCTTC | + |
Preference number: 4 (lower is better) Translates to: HPPKNRESRVQRPNTLEKEVEAF*TVNTLF Trigger: GAAGAGTGTATTCACTGTGCAAAAAGCTTCCACTTC...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTCTCTTCCTCGTCTTCTaGAGTCTCTGCCTGGGGTGG | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSLFLVF*SLCLGW Trigger: CCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAG...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCATCACCACACTCGGGATaGCACACACTGGTCTGTAAA | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPSPHSG*HTLVCK Trigger: TTTACAGACCAGTGTGTGCCATCCCGAGTGTGGTGA...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTTTCGCGCCTGTCTCTTaGCTCTGCGCTTCACTTCCT | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSFAPVS*LCASLP Trigger: AGGAAGTGAAGCGCAGAGTCAAGAGACAGGCGCGAA...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTAGGTTCCCAGCTGTGTaGAGCCGGCTTTACATCTGC | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSRFPAV*SRLYIC Trigger: GCAGATGTAAAGCCGGCTTCACACAGCTGGGAACCT...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | AGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCAGTTGTGTGCCATGGAGGTTCTTATCAGTACAATaGATGTACCACATGTTAGAC | + |
Preference number: 4 (lower is better) Translates to: SPECRGQIHLKSSCVPWRFLSVQ*MYHMLD Trigger: GTCTAACATGTGGTACATGCATTGTACTGATAAGAA...CCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCCGTCCAGCATCCGGATaGCTCCTATCTTTGCATTAT | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFRPASG*LLSLHY Trigger: ATAATGCAAAGATAGGAGGCATCCGGATGCTGGACG...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTGCAGCGTCTTGCAGCTaGATCCCCAAAGTAGCCCAA | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSAASCS*IPKVAQ Trigger: TTGGGCTACTTTGGGGATGCAGCTGCAAGACGCTGC...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTAGGTACCAGGGTTTGTaGCCGTTCTCAGTGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSRYQGL*PFSVVL Trigger: CAGCACCACTGAGAACGGCCACAAACCCTGGTACCT...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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3UTR CAA 72 bp | TTTGAAGTGTGGATTCAACAGACAACAGCTGAGTCCTaGCCACCTACAGGTGACAAGACAAACACATTACAG | + |
Preference number: 4 (lower is better) Translates to: FEVWIQQTTAES*PPTGDKTNTLQ Trigger: CTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGGACTCAGCTGTTGTCTGTTGAATCCACACTTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCCGGTGCCATATAAAATaGGGCTCCATTCTTTCAGCT | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFRCHIK*GSILSA Trigger: AGCTGAAAGAATGGAGCCTCATTTTATATGGCACCG...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR TCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCACGGTGCCATATAAAATaGGGCTCCATTCTTTCAGCT | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPRCHIK*GSILSA Trigger: AGCTGAAAGAATGGAGCCTCATTTTATATGGCACCG...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCATCCAGCAATCTCTTTaGCAAAAGTTGAGACTTGGT | + |
Preference number: 4 (lower is better) Translates to: GRKINPALSCRLVPYWTSIQQSL*QKLRLG Trigger: ACCAAGTCTCAACTTTTGGCAAAGAGATTGCTGGAT...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTCGTTCTCAGTGGTGCTaGTTACGGAGATGGTGTAGA | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSRSQWC*LRRWCR Trigger: TCTACACCATCTCCGTAAGCAGCACCACTGAGAACG...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTACACATTTCCAGTCTTaGAAGTGGAAGCTTTTTGCA | + |
Preference number: 4 (lower is better) Translates to: MWRETRLGKFKASVIPLATHFQS*KWKLFA Trigger: TGCAAAAAGCTTCCACTTCCAAGACTGGAAATGTGT...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTACACATTTCCAGTCTTaGAAGTGGAAGCTTTTTGCA | + |
Preference number: 4 (lower is better) Translates to: CFESNFRLQPASRVQGDFTHFQS*KWKLFA Trigger: TGCAAAAAGCTTCCACTTCCAAGACTGGAAATGTGT...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTCCTCCTTACACACAGTaGACTTCTCAGGTTCATCCA | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSPPYTQ*TSQVHP Trigger: TGGATGAACCTGAGAAGTGCACTGTGTGTAAGGAGG...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCGTCATATCTCGGGGATaGGTCATAATCATTTCCATT | + |
Preference number: 4 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFVISRG*VIIISI Trigger: AATGGAAATGATTATGACCCATCCCCGAGATATGAC...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTACACAGTTCAAGCACTaGTCTGCATTGGGACCATCA | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSTQFKH*SALGPS Trigger: TGATGGTCCCAATGCAGACCAGTGCTTGAACTGTGT...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTTTCACTTCCTGTTGTTaGAGCCATTTTACCTGTGGG | + |
Preference number: 4 (lower is better) Translates to: FASLISYLKCGFNRQQLSFTSCC*SHFTCG Trigger: CCCACAGGTAAAATGGCTGCAACAACAGGAAGTGAA...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR GCA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCATTCTTATCAGTACAATaGATGTACCACATGTTAGAC | + |
Preference number: 4 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPFLSVQ*MYHMLD Trigger: GTCTAACATGTGGTACATGCATTGTACTGATAAGAA...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | CGCAGCCACGCGGTCCGCCGCGCCGGGGCCGCCCAGCACTTGCACTaGCCAGTGGTTGGTGTAGACGGGGCGCGGCGGCGGCAGCGCGGA | + |
Preference number: 5 (lower is better) Translates to: RSHAVRRAGAAQHLH*PVVGVDGARRRQRG Trigger: TCCGCGCTGCCGCCGCCGCGCCCCGTCTACACCAACCACTGGGCAGTGCAAGTGCTGGGCGGCCCCGGCGCGGCGGACCGCGTGGCTGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCTGGTCCGCACAGGCGTaGGTCAGGGCTGTGGTCCGT | + |
Preference number: 5 (lower is better) Translates to: GPGGPRDTGRTAMWTARLWSAQA*VRAVVR Trigger: ACGGACCACAGCCCTGACCAACGCCTGTGCGGACCA...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 90 bp | GGGATGCTCCTGGGCCTTTTGTCTGCGGTGGCCACGCATACGTGCTaGGAGGGCACTGCCGTCCACTTCCTCGCCTCCAGGACCAGAGCT | + |
Preference number: 5 (lower is better) Translates to: GMLLGLLSAVATHTC*EGTAVHFLASRTRA Trigger: AGCTCTGGTCCTGGAGGCGAGGAAGTGGACGGCAGTGCCCTCCCAGCACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CCA 90 bp | CCTCGTCTTCTGGAGTCTCTGCCTGGGGTGGTTGTCCAGCAGCCTTaGGAGGCTCCTGCTCCGGGACGGAGAGCTCCAGCATCCGTGAGC | + |
Preference number: 5 (lower is better) Translates to: PRLLESLPGVVVQQP*EAPAPGRRAPASVS Trigger: GCTCACGGATGCTGGAGCTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | GGGCCTTTTGTCTGCGGTGGCCACGCATACGTGCTGGGAGGGCACTaGCGTCCACTTCCTCGCCTCCAGGACCAGAGCTTCTGCATCCAC | + |
Preference number: 5 (lower is better) Translates to: GPFVCGGHAYVLGGH*RPLPRLQDQSFCIH Trigger: GTGGATGCAGAAGCTCTGGTCCTGGAGGCGAGGAAGTGGACGGCAGTGCCCTCCCAGCACGTATGCGTGGCCACCGCAGACAAAAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS GCA 90 bp | GAGTGGTCCGCACAGGCGTTGGTCAGGGCTGTGGTCCGTAGCACCTaGACTATGGGGATGCTCCTGGGCCTTTTGTCTGCGGTGGCCACG | + |
Preference number: 5 (lower is better) Translates to: EWSAQALVRAVVRST*TMGMLLGLLSAVAT Trigger: CGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCCTCTGCCTGGGGTGGTaGTCCAGCAGCCTTGGGAGG | + |
Preference number: 5 (lower is better) Translates to: PPAVWWPVMHREEARPFILCLGW*SSSLGR Trigger: CCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAG...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 90 bp | AGCCTTGGGAGGCTCCTGCTCCGGGACGGAGAGCTCCAGCATCCGTaGGCGAGACTGATGGGAGCTGAAGGTGCGATATGGGTGCTCTGC | + |
Preference number: 5 (lower is better) Translates to: SLGRLLLRDGELQHP*ARLMGAEGAIWVLC Trigger: GCAGAGCACCCATATCGCACCTTCAGCTCCCATCAGTCTCGCTCACGGATGCTGGAGCTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | AGGCGTTGGTCAGGGCTGTGGTCCGTAGCACCTGCACTATGGGGATaGTCCTGGGCCTTTTGTCTGCGGTGGCCACGCATACGTGCTGGG | + |
Preference number: 5 (lower is better) Translates to: RRWSGLWSVAPALWG*SWAFCLRWPRIRAG Trigger: CCCAGCACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS GCA 90 bp | AGAACCCACGGCGACAAGACAGGCACTGTGCTGGGCTCCTGCCCGTaGACGTCTCACATCCCTTATGGCAGCGACGGCAGCGTCTTGCAG | + |
Preference number: 5 (lower is better) Translates to: RTHGDKTGTVLGSCP*TSHIPYGSDGSVLQ Trigger: CTGCAAGACGCTGCCGTCGCTGCCATAAGGGATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCTTGTCGCCGTGGGTTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | GGTGATAGAACCCACGGCGACAAGACAGGCACTGTGCTGGGCTCCTaGCCGTGCACGTCTCACATCCCTTATGGCAGCGACGGCAGCGTC | + |
Preference number: 5 (lower is better) Translates to: GDRTHGDKTGTVLGS*PCTSHIPYGSDGSV Trigger: GACGCTGCCGTCGCTGCCATAAGGGATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCTTGTCGCCGTGGGTTCTATCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 90 bp | GTAGCACCTGCACTATGGGGATGCTCCTGGGCCTTTTGTCTGCGGTaGCCACGCATACGTGCTGGGAGGGCACTGCCGTCCACTTCCTCG | + |
Preference number: 5 (lower is better) Translates to: VAPALWGCSWAFCLR*PRIRAGRALPSTSS Trigger: CGAGGAAGTGGACGGCAGTGCCCTCCCAGCACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CCA 90 bp | CCGCACAGGCGTTGGTCAGGGCTGTGGTCCGTAGCACCTGCACTATaGGGATGCTCCTGGGCCTTTTGTCTGCGGTGGCCACGCATACGT | + |
Preference number: 5 (lower is better) Translates to: PHRRWSGLWSVAPAL*GCSWAFCLRWPRIR Trigger: ACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CCA 90 bp | GCTCCAGGTACACCACACGCTGGTCTGAGTGGTCCGCACAGGCGTTaGTCAGGGCTGTGGTCCGTAGCACCTGCACTATGGGGATGCTCC | + |
Preference number: 5 (lower is better) Translates to: APGTPHAGLSGPHRR*SGLWSVAPALWGCS Trigger: GGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTCAGACCAGCGTGTGGTGTACCTGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCTTGCTGCACGTGTGGTaGGTGATGCAGGAGGTTCCC | + |
Preference number: 5 (lower is better) Translates to: GPGGPRDTGRTAMWTARLLLHVW*VMQEVP Trigger: GGGAACCTCCTGCATCACCAACCACACGTGCAGCAA...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 90 bp | GGCTCCTGCTCCGGGACGGAGAGCTCCAGCATCCGTGAGCGAGACTaGTGGGAGCTGAAGGTGCGATATGGGTGCTCTGCGGTGCCATAT | + |
Preference number: 5 (lower is better) Translates to: GSCSGTESSSIRERD*WELKVRYGCSAVPY Trigger: ATATGGCACCGCAGAGCACCCATATCGCACCTTCAGCTCCCATCAGTCTCGCTCACGGATGCTGGAGCTCTCCGTCCCGGAGCAGGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | CGTCTCCTGGTGGTGATAGAACCCACGGCGACAAGACAGGCACTGTaGTGGGCTCCTGCCCGTGCACGTCTCACATCCCTTATGGCAGCG | + |
Preference number: 5 (lower is better) Translates to: RLLVVIEPTATRQAL*WAPARARLTSLMAA Trigger: CGCTGCCATAAGGGATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCTTGTCGCCGTGGGTTCTATCACCACCAGGAGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | GGGATGGCACACACCTGTGTACTCTTCCTCGTCTTCTGGAGTCTCTaGCTGGGGTGGTTGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGG | + |
Preference number: 5 (lower is better) Translates to: GMAHTCVLFLVFWSL*LGWLSSSLGRLLLR Trigger: CCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGGTGTGTGCCATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098391.11 |
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CDS CCA 90 bp | CCACACGCTGGTCTGAGTGGTCCGCACAGGCGTTGGTCAGGGCTGTaGTCCGTAGCACCTGCACTATGGGGATGCTCCTGGGCCTTTTGT | + |
Preference number: 5 (lower is better) Translates to: PHAGLSGPHRRWSGL*SVAPALWGCSWAFC Trigger: ACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTCAGACCAGCGTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CCA 90 bp | AGGAGCTGTGTACTCTTCCTCGTCTTCTGGAGTCTCTGCCTGGGGTaGTTGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGGGACGGAGAG | + |
Preference number: 5 (lower is better) Translates to: RSCVLFLVFWSLCLG*LSSSLGRLLLRDGE Trigger: CTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS CCA 90 bp | CTCCTGGTGGTGATAGAACCCACGGCGACAAGACAGGCACTGTGCTaGGCTCCTGCCCGTGCACGTCTCACATCCCTTATGGCAGCGACG | + |
Preference number: 5 (lower is better) Translates to: LLVVIEPTATRQALC*APARARLTSLMAAT Trigger: CGTCGCTGCCATAAGGGATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCTTGTCGCCGTGGGTTCTATCACCACCAGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 90 bp | CACACCTGTGTACTCTTCCTCGTCTTCTGGAGTCTCTGCCTGGGGTaGTTGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGGGACGGAGAG | + |
Preference number: 5 (lower is better) Translates to: HTCVLFLVFWSLCLG*LSSSLGRLLLRDGE Trigger: CTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098391.11 |
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CDS CCA 90 bp | TGGCACACACCTGTGTACTCTTCCTCGTCTTCTGGAGTCTCTGCCTaGGGTGGTTGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGGGACG | + |
Preference number: 5 (lower is better) Translates to: WHTPVYSSSSSGVSA*GGCPAALGGSCSGT Trigger: CGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGGTGTGTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098391.11 |
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CDS CCA 90 bp | GCTCCAGGTACACCACACGCTGGTCTGAGTGGTCCGCACAGGCGTTaGTCAGGGCTGTGGTCCGTAGCACCTGCACTATGGGGATGCTCT | + |
Preference number: 5 (lower is better) Translates to: APGTPHAGLSGPHRR*SGLWSVAPALWGCS Trigger: AGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTCAGACCAGCGTGTGGTGTACCTGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176209.2 |
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CDS GCA 90 bp | AGATCGCCCCGGCGTGGGTGTGAGATAGAGATTCGGACAACCACATaGTCCAGGTACACCACACGCTGGTCTGAGTGGTCCGCACAGGCG | + |
Preference number: 5 (lower is better) Translates to: RSPRRGCEIEIRTTT*SRYTTRWSEWSAQA Trigger: CGCCTGTGCGGACCACTCAGACCAGCGTGTGGTGTACCTGGAGCATGTGGTTGTCCGAATCTCTATCTCACACCCACGCCGGGGCGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 90 bp | ATGGAAGGAGCTGTGTACTCTTCCTCGTCTTCTGGAGTCTCTGCCTaGGGTGGTTGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGGGACG | + |
Preference number: 5 (lower is better) Translates to: MEGAVYSSSSSGVSA*GGCPAALGGSCSGT Trigger: CGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGCTCCTTCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCGGACCATCACAGCCTTaGTCACCACACTCGGGATGG | + |
Preference number: 5 (lower is better) Translates to: PPAVWWPVMHREEARPFIGPSQP*SPHSGW Trigger: CCATCCCGAGTGTGGTGACAAAGGCTGTGATGGTCC...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGGGACCATCACAGCCTTaGTCACCACACTCGGGATGG | + |
Preference number: 5 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRGPSQP*SPHSGW Trigger: CCATCCCGAGTGTGGTGACAAAGGCTGTGATGGTCC...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCGTTCGCAGAGCCGATaGGACTTCACCATCTCGCAG | + |
Preference number: 5 (lower is better) Translates to: CPSGCLVASDAQGGSEALRSQSR*DFTISQ Trigger: CTGCGAGATGGTGAAGTCCAATCGGCTCTGCGAACG...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | TTGGATGGAAGGAGCTGTGTACTCTTCCTCGTCTTCTGGAGTCTCTaGCTGGGGTGGTTGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGG | + |
Preference number: 5 (lower is better) Translates to: LDGRSCVLFLVFWSL*LGWLSSSLGRLLLR Trigger: CCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGCTCCTTCCATCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS GCA 90 bp | GCACGTCTCACATCCCTTATGGCAGCGACGGCAGCGTCTTGCAGCTaGATCCCCAAAGTAGCCCAAGGGGCACTCGCTCACACACTTCCT | + |
Preference number: 5 (lower is better) Translates to: ARLTSLMAATAASCS*IPKVAQGALAHTLP Trigger: AGGAAGTGTGTGAGCGAGTGCCCCTTGGGCTACTTTGGGGATGCAGCTGCAAGACGCTGCCGTCGCTGCCATAAGGGATGTGAGACGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 90 bp | ACCACACTCGGGATGGCACACACCTGTGTACTCTTCCTCGTCTTCTaGAGTCTCTGCCTGGGGTGGTTGTCCAGCAGCCTTGGGAGGCTC | + |
Preference number: 5 (lower is better) Translates to: TTLGMAHTCVLFLVF*SLCLGWLSSSLGRL Trigger: GAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGGTGTGTGCCATCCCGAGTGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098391.11 |
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CDS CCA 90 bp | CCACACGCTGGTCTGAGTGGTCCGCACAGGCGTTGGTCAGGGCTGTaGTCCGTAGCACCTGCACTATGGGGATGCTCTTTGCTTCTAGAG | + |
Preference number: 5 (lower is better) Translates to: PHAGLSGPHRRWSGL*SVAPALWGCSLLLE Trigger: CTCTAGAAGCAAAGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTCAGACCAGCGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCAAGGCTGATGCCCAGAGACTaGGCCTCCACCACATCGGTC | + |
Preference number: 5 (lower is better) Translates to: VEPSSGGDTAVRCRATPRLMPRD*ASTTSV Trigger: GACCGATGTGGTGGAGGCCAAGTCTCTGGGCATCAG...CCTTGGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTCTGCCTGGGGTGGTaGTCCAGCAGCCTTGGGAGG | + |
Preference number: 5 (lower is better) Translates to: LRATSTCSGAQRCCSRTQLCLGW*SSSLGR Trigger: CCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAG...CTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGAAGGTCTCATCGGCATaGCTGCACGTGTGGTTGGTG | + |
Preference number: 5 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRKVSSA*LHVWLV Trigger: CACCAACCACACGTGCAGCAATGCCGATGAGACCTT...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 90 bp | AGGAGAGCCTTGGATGGAAGGAGCTGTGTACTCTTCCTCGTCTTCTaGAGTCTCTGCCTGGGGTGGTTGTCCAGCAGCCTTGGGAGGCTC | + |
Preference number: 5 (lower is better) Translates to: RRALDGRSCVLFLVF*SLCLGWLSSSLGRL Trigger: GAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGCTCCTTCCATCCAAGGCTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATGGGGCCGCCCAGCACTaGCACTGCCCAGTGGTTGGT | + |
Preference number: 5 (lower is better) Translates to: LQSERRAGPCGERRGWGNGAAQH*HCPVVG Trigger: ACCAACCACTGGGCAGTGCAAGTGCTGGGCGGCCCC...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | GGCCCAGGAGGCCCCAGGGACACAGGTAGAACAGCCATGTGGACAGCTCGGCTCAGTATTAGGAGAGCCTaGGATGGAAGGAGCTGTGTA | + |
Preference number: 5 (lower is better) Translates to: GPGGPRDTGRTAMWTARLSIRRA*DGRSCV Trigger: TACACAGCTCCTTCCATCCAAGGCTCTCCTAATACT...GAGCCGAGCTGTCCACATGGCTGTTCTACCTGTGTCCCTGGGGCCTCCTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGTCACACACTTCCTGTTaGTCTTGGAGTTCCCCAGGC | + |
Preference number: 5 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRSHTSC*SWSSPG Trigger: GCCTGGGGAACTCCAAGACAAACAGGAAGTGTGTGA...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGCATCTTCGACACACTTaGTGGGGTAAGCCAGGCATC | + |
Preference number: 5 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRHLRHT*WGKPGI Trigger: GATGCCTGGCTTACCCCACAAAGTGTGTCGAAGATG...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 90 bp | AGCTCCGTTGACTTTCCAGTCGCTCGCCTTCAGATGAGCTGGCCGTaGTGTCTTCACCAGCAGGTGCTGCACATCCCTCCAGGTCAACTG | + |
Preference number: 5 (lower is better) Translates to: SSVDFPVARLQMSWP*CLHQQVLHIPPGQL Trigger: CAGTTGACCTGGAGGGATGTGCAGCACCTGCTGGTGAAGACATCACGGCCAGCTCATCTGAAGGCGAGCGACTGGAAAGTCAACGGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS TCA 90 bp | TGGGCCCCACACAGGTCCGGCAGGTGTGATGGCATTCCCCACATTTaGCGAGCTCTGAATCGAAGTAGGTACCCGGTTCACAGTCCGGAA | + |
Preference number: 5 (lower is better) Translates to: WAPHRSGRCDGIPHI*RALNRSRYPVHSPE Trigger: TTCCGGACTGTGAACCGGGTACCTACTTCGATTCAGAGCTCGTCAAATGTGGGGAATGCCATCACACCTGCCGGACCTGTGTGGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | AGTAGGAGTTGTTGGCCGAGGCAGCGACTTCACCCGCACAGCGAGTaGCATGTTTGTTCTCGTTGCTGGCGTCATATCTCGGGGATGGGT | + |
Preference number: 5 (lower is better) Translates to: SRSCWPRQRLHPHSE*HVCSRCWRHISGMG Trigger: ACCCATCCCCGAGATATGACGCCAGCAACGAGAACAAACATGGCACTCGCTGTGCGGGTGAAGTCGCTGCCTCGGCCAACAACTCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TGTCCCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTGCGCTTCACTTCCTGTaGTTGCAGCCATTTTACCTG | + |
Preference number: 5 (lower is better) Translates to: CPSGCLVASDAQGGSEALALHFL*LQPFYL Trigger: CAGGTAAAATGGCTGCAACAACAGGAAGTGAAGCGC...AAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGCTGATGCCCAGAGACTaGGCCTCCACCACATCGGTC | + |
Preference number: 5 (lower is better) Translates to: LRATSTCSGAQRCCSRTQLMPRD*ASTTSV Trigger: GACCGATGTGGTGGAGGCCAAGTCTCTGGGCATCAG...CTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 90 bp | ACAGGTCCGGCAGGTGTGATGGCATTCCCCACATTTGACGAGCTCTaGATCGAAGTAGGTACCCGGTTCACAGTCCGGAATGCAGCTGCC | + |
Preference number: 5 (lower is better) Translates to: TGPAGVMAFPTFDEL*IEVGTRFTVRNAAA Trigger: GGCAGCTGCATTCCGGACTGTGAACCGGGTACCTACTTCGATTCAGAGCTCGTCAAATGTGGGGAATGCCATCACACCTGCCGGACCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | GCATCCGGATGCCTCCTATCTTTGCATTATATGCGATGCCCACGATaGAGTAGGAGTTGTTGGCCGAGGCAGCGACTTCACCCGCACAGC | + |
Preference number: 5 (lower is better) Translates to: ASGCLLSLHYMRCPR*SRSCWPRQRLHPHS Trigger: GCTGTGCGGGTGAAGTCGCTGCCTCGGCCAACAACTCCTACTGCATCGTGGGCATCGCATATAATGCAAAGATAGGAGGCATCCGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS GCA 90 bp | CGCCGTCCAGCATCCGGATGCCTCCTATCTTTGCATTATATGCGATaGCCACGATGCAGTAGGAGTTGTTGGCCGAGGCAGCGACTTCAC | + |
Preference number: 5 (lower is better) Translates to: RRPASGCLLSLHYMR*PRCSRSCWPRQRLH Trigger: GTGAAGTCGCTGCCTCGGCCAACAACTCCTACTGCATCGTGGGCATCGCATATAATGCAAAGATAGGAGGCATCCGGATGCTGGACGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS GCA 90 bp | GAGTGGTCCGCACAGGCGTTGGTCAGGGCTGTGGTCCGTAGCACCTaGACTATGGGGATGCTCTTTGCTTCTAGAGCCAAGGCAATGATA | + |
Preference number: 5 (lower is better) Translates to: EWSAQALVRAVVRST*TMGMLFASRAKAMI Trigger: TATCATTGCCTTGGCTCTAGAAGCAAAGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TTAAGGGCCACCTCCACCTGTTCAGGTGCTCAGAGATGCTGCAGTAGAACCCAGGCCATACTCGAAAGCTaGTTTAGCCAGCCGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: LRATSTCSGAQRCCSRTQAILES*FSQPAW Trigger: CCAGGCCGGCTGGCTAAACAAGCTTTCGAGTATGGC...CTGGGTTCTACTGCAGCATCTCTGAGCACCTGAACAGGTGGAGGTGGCCCTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCTCACACACTTCCTGTTaGTCTTGGAGTTCCCCAGGC | + |
Preference number: 5 (lower is better) Translates to: CSRTQLWGRYSCQMQGYPSHTSC*SWSSPG Trigger: GCCTGGGGAACTCCAAGACAAACAGGAAGTGTGTGA...GGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TGCAGTAGAACCCAGCTCTGGGGGAGATACAGCTGTCAGATGCAGGGCTACCCCCATCTTCGACACACTTaGTGGGGTAAGCCAGGCATC | + |
Preference number: 5 (lower is better) Translates to: CSRTQLWGRYSCQMQGYPHLRHT*WGKPGI Trigger: GATGCCTGGCTTACCCCACAAAGTGTGTCGAAGATG...GGGGTAGCCCTGCATCTGACAGCTGTATCTCCCCCAGAGCTGGGTTCTACTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGGGGGCCGCCCAGCACTaGCACTGCCCAGTGGTTGGT | + |
Preference number: 5 (lower is better) Translates to: WRETRLGKFKASVIPLAQGAAQH*HCPVVG Trigger: ACCAACCACTGGGCAGTGCAAGTGCTGGGCGGCCCC...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | GGGGCTGCCGTTTCGGAAGGAGCTGACTGCGTAGACATAGATTCTCTCTCTAGTGCCATACTCGAAAGCTaGTTTAGCCAGCCGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: GAAVSEGADCVDIDSLSSAILES*FSQPAW Trigger: CCAGGCCGGCTGGCTAAACAAGCTTTCGAGTATGGC...ACTAGAGAGAGAATCTATGTCTACGCAGTCAGCTCCTTCCGAAACGGCAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TCCTCCTTCACAGGCTCTGTAGCTGTAGATGGCTGGTGGCTCGGGCCCAGGAGGCACACATTTCCAGTCTaGGAAGTGGAAGCTTTTTGC | + |
Preference number: 5 (lower is better) Translates to: SSFTGSVAVDGWWLGPRRHTFPV*EVEAFC Trigger: GCAAAAAGCTTCCACTTCCAAGACTGGAAATGTGTG...CCTCCTGGGCCCGAGCCACCAGCCATCTACAGCTACAGAGCCTGTGAAGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CCTCCGGCTGTTTGGTGGCCAGTGATGCACAGGGAGGAAGCGAGGCCCTTCATCCACACATTTCCAGTCTaGGAAGTGGAAGCTTTTTGC | + |
Preference number: 5 (lower is better) Translates to: PPAVWWPVMHREEARPFIHTFPV*EVEAFC Trigger: GCAAAAAGCTTCCACTTCCAAGACTGGAAATGTGTG...GATGAAGGGCCTCGCTTCCTCCCTGTGCATCACTGGCCACCAAACAGCCGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAATTGCTGCACGTGTGGTaGGTGATGCAGGAGGTTCCC | + |
Preference number: 5 (lower is better) Translates to: HYSQRGEQDHVERDEVGELLHVW*VMQEVP Trigger: GGGAACCTCCTGCATCACCAACCACACGTGCAGCAA...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 90 bp | GGCACTCGCTCACACACTTCCTGTTTGTCTTGGAGTTCCCCAGGCTaGAGTGGACACAGTTCAAGCACTGGTCTGCATTGGGACCATCAC | + |
Preference number: 5 (lower is better) Translates to: GTRSHTSCLSWSSPG*SGHSSSTGLHWDHH Trigger: GTGATGGTCCCAATGCAGACCAGTGCTTGAACTGTGTCCACTTCAGCCTGGGGAACTCCAAGACAAACAGGAAGTGTGTGAGCGAGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCTGATGCCCAGAGACTaGGCCTCCACCACATCGGTC | + |
Preference number: 5 (lower is better) Translates to: HPPKNRESRVQRPNTLEKLMPRD*ASTTSV Trigger: GACCGATGTGGTGGAGGCCAAGTCTCTGGGCATCAG...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGGCCATACTCGAAAGCTaGTTTAGCCAGCCGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: DKHITVREESRTMWRETRAILES*FSQPAW Trigger: CCAGGCCGGCTGGCTAAACAAGCTTTCGAGTATGGC...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCTGGTCCGCACAGGCGTaGGTCAGGGCTGTGGTCCGT | + |
Preference number: 5 (lower is better) Translates to: GRKINPALSCRLVPYWTSWSAQA*VRAVVR Trigger: ACGGACCACAGCCCTGACCAACGCCTGTGCGGACCA...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGCGTTCGCAGAGCCGATaGGACTTCACCATCTCGCAG | + |
Preference number: 5 (lower is better) Translates to: DKHITVREESRTMWRETRRSQSR*DFTISQ Trigger: CTGCGAGATGGTGAAGTCCAATCGGCTCTGCGAACG...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 90 bp | TTTGTCTTGGAGTTCCCCAGGCTGAAGTGGACACAGTTCAAGCACTaGTCTGCATTGGGACCATCACAGCCTTTGTCACCACACTCGGGA | + |
Preference number: 5 (lower is better) Translates to: FVLEFPRLKWTQFKH*SALGPSQPLSPHSG Trigger: TCCCGAGTGTGGTGACAAAGGCTGTGATGGTCCCAATGCAGACCAGTGCTTGAACTGTGTCCACTTCAGCCTGGGGAACTCCAAGACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCAAGGGGATTTTTGGTCCGCACAGGCGTaGGTCAGGGCTGTGGTCCGT | + |
Preference number: 5 (lower is better) Translates to: CFESNFRLQPASRVQGDFWSAQA*VRAVVR Trigger: ACGGACCACAGCCCTGACCAACGCCTGTGCGGACCA...AAAATCCCCTTGAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCTCTGCCTGGGGTGGTaGTCCAGCAGCCTTGGGAGG | + |
Preference number: 5 (lower is better) Translates to: MWRETRLGKFKASVIPLALCLGW*SSSLGR Trigger: CCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAACATCTTCGACACACTTaGTGGGGTAAGCCAGGCATC | + |
Preference number: 5 (lower is better) Translates to: HYSQRGEQDHVERDEVGEHLRHT*WGKPGI Trigger: GATGCCTGGCTTACCCCACAAAGTGTGTCGAAGATG...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | AGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCAGTTGTGTGCCATGGAGGAAGGTCTCATCGGCATaGCTGCACGTGTGGTTGGTG | + |
Preference number: 5 (lower is better) Translates to: SPECRGQIHLKSSCVPWRKVSSA*LHVWLV Trigger: CACCAACCACACGTGCAGCAATGCCGATGAGACCTT...CCTCCATGGCACACAACTGCTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGCGTTCGCAGAGCCGATaGGACTTCACCATCTCGCAG | + |
Preference number: 5 (lower is better) Translates to: HPPKNRESRVQRPNTLEKRSQSR*DFTISQ Trigger: CTGCGAGATGGTGAAGTCCAATCGGCTCTGCGAACG...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 90 bp | CTTTCCTGTGTAGCCACGCTTCCACGCCGCCTGGACGTTCATCTCTaGCCGACAGCGACTGTTCTTATCAGTACAATGCATGTACCACAT | + |
Preference number: 5 (lower is better) Translates to: LSCVATLPRRLDVHL*PTATVLISTMHVPH Trigger: ATGTGGTACATGCATTGTACTGATAAGAACAGTCGCTGTCGGTCAGAGATGAACGTCCAGGCGGCGTGGAAGCGTGGCTACACAGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS GCA 90 bp | AGGCTCCATTCTTTCAGCTTTCCTTGTTTCTCTGGGTTTCGGACCTaGGATGGTATATCCTGCACTTCCAGAGTCCACTCCCCTTCAGCC | + |
Preference number: 5 (lower is better) Translates to: RLHSFSFPCFSGFRT*DGISCTSRVHSPSA Trigger: GGCTGAAGGGGAGTGGACTCTGGAAGTGCAGGATATACCATCGCAGGTCCGAAACCCAGAGAAACAAGGAAAGCTGAAAGAATGGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 90 bp | ATTGACATCGTAGCTTGCATAGGAATCGTAGTTGGGGGCCAGGTCTaGGTGATTCCTTTCTATGCCGTCATCGAGGATGGTGACGACCAC | + |
Preference number: 5 (lower is better) Translates to: IDIVACIGIVVGGQV*VIPFYAVIEDGDDH Trigger: GTGGTCGTCACCATCCTCGATGACGGCATAGAAAGGAATCACCCAGACCTGGCCCCCAACTACGATTCCTATGCAAGCTACGATGTCAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS CCA 90 bp | ACCCTTTTTAATGCCATACTCGAAAGCTTGTTTAGCCAGCCGGCCTaGTCCATCTACTGTCTTTCCGTCATCATCGGGTCCCCAACTGGC | + |
Preference number: 5 (lower is better) Translates to: TLFNAILESLFSQPA*SIYCLSVIIGSPTG Trigger: GCCAGTTGGGGACCCGATGATGACGGAAAGACAGTAGATGGACCAGGCCGGCTGGCTAAACAAGCTTTCGAGTATGGCATTAAAAAGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 90 bp | CGTTGCTGGCGTCATATCTCGGGGATGGGTCATAATCATTTCCATTaGCATCGTAGCTTGCATAGGAATCGTAGTTGGGGGCCAGGTCTG | + |
Preference number: 5 (lower is better) Translates to: RCWRHISGMGHNHFH*HRSLHRNRSWGPGL Trigger: CAGACCTGGCCCCCAACTACGATTCCTATGCAAGCTACGATGTCAATGGAAATGATTATGACCCATCCCCGAGATATGACGCCAGCAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS CCA 90 bp | CACTCGGGATGGCACACACTGGTCTGTAAAGTATTAGGAGAGCCTTaGATGGAAGGAGCTGTGTACTCTTCCTCGTCTTCTGGAGTCTCT | + |
Preference number: 5 (lower is better) Translates to: HSGWHTLVCKVLGEP*MEGAVYSSSSSGVS Trigger: AGAGACTCCAGAAGACGAGGAAGAGTACACAGCTCCTTCCATCCAAGGCTCTCCTAATACTTTACAGACCAGTGTGTGCCATCCCGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGCTCCAGGTCAACTGGTaGTTTGCTTCTAGAGCCAAG | + |
Preference number: 5 (lower is better) Translates to: DKHITVREESRTMWRETRLQVNW*FASRAK Trigger: CTTGGCTCTAGAAGCAAACAACCAGTTGACCTGGAG...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCTTATGCCCAGCTCCGTaGACTTTCCAGTCGCTCGCC | + |
Preference number: 5 (lower is better) Translates to: GRKINPALSCRLVPYWTSLCPAP*TFQSLA Trigger: GGCGAGCGACTGGAAAGTCAACGGAGCTGGGCATAA...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGTTATGCCCAGCTCCGTaGACTTTCCAGTCGCTCGCC | + |
Preference number: 5 (lower is better) Translates to: WRETRLGKFKASVIPLAQLCPAP*TFQSLA Trigger: GGCGAGCGACTGGAAAGTCAACGGAGCTGGGCATAA...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | CATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAAGTATTAGGAGAGCCTaGGATGGAAGGAGCTGTGTA | + |
Preference number: 5 (lower is better) Translates to: HYSQRGEQDHVERDEVGESIRRA*DGRSCV Trigger: TACACAGCTCCTTCCATCCAAGGCTCTCCTAATACT...TTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGTCACACACTTCCTGTTaGTCTTGGAGTTCCCCAGGC | + |
Preference number: 5 (lower is better) Translates to: HPPKNRESRVQRPNTLEKSHTSC*SWSSPG Trigger: GCCTGGGGAACTCCAAGACAAACAGGAAGTGTGTGA...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTGGCATTCCCCACATTaGACGAGCTCTGAATCGAAG | + |
Preference number: 5 (lower is better) Translates to: DKHITVREESRTMWRETRWHSPH*TSSESK Trigger: CTTCGATTCAGAGCTCGTCAAATGTGGGGAATGCCA...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGTTGGGGAAATCTTCACTTCCTGTTGTaGCAGCCATTTTACCTGTGG | + |
Preference number: 5 (lower is better) Translates to: LQSERRAGPCGERRGWGNLHFLL*QPFYLW Trigger: CCACAGGTAAAATGGCTGCAACAACAGGAAGTGAAG...ATTTCCCCAACCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GACAAACACATTACAGTCAGAGAGGAGAGCAGGACCATGTGGAGAGAGACGAGGCTTCACTTCCTGTTGTaGCAGCCATTTTACCTGTGG | + |
Preference number: 5 (lower is better) Translates to: DKHITVREESRTMWRETRLHFLL*QPFYLW Trigger: CCACAGGTAAAATGGCTGCAACAACAGGAAGTGAAG...CCTCGTCTCTCTCCACATGGTCCTGCTCTCCTCTCTGACTGTAATGTGTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CCTTGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGGAGAGCAGGCGCTTCACTTCCTGTaGTTGCAGCCATTTTACCTG | + |
Preference number: 5 (lower is better) Translates to: PCHLQVTRQTHYSQRGEQALHFL*LQPFYL Trigger: CAGGTAAAATGGCTGCAACAACAGGAAGTGAAGCGC...CTGCTCTCCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CCTTGCCACCTACAGGTGACAAGACAAACACATTACAGTCAGAGAGGAGAGCAGTGGCATTCCCCACATTaGACGAGCTCTGAATCGAAG | + |
Preference number: 5 (lower is better) Translates to: PCHLQVTRQTHYSQRGEQWHSPH*TSSESK Trigger: CTTCGATTCAGAGCTCGTCAAATGTGGGGAATGCCA...CTGCTCTCCTCTCTGACTGTAATGTGTTTGTCTTGTCACCTGTAGGTGGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | CATCCACCCAAGAACAGAGAGTCCCGAGTGCAGAGGCCAAATACACTTGAAAAGTGGCATTCCCCACATTaGACGAGCTCTGAATCGAAG | + |
Preference number: 5 (lower is better) Translates to: HPPKNRESRVQRPNTLEKWHSPH*TSSESK Trigger: CTTCGATTCAGAGCTCGTCAAATGTGGGGAATGCCA...CTTTTCAAGTGTATTTGGCCTCTGCACTCGGGACTCTCTGTTCTTGGGTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCAGAAGGTCTCATCGGCATaGCTGCACGTGTGGTTGGTG | + |
Preference number: 5 (lower is better) Translates to: WRETRLGKFKASVIPLAQKVSSA*LHVWLV Trigger: CACCAACCACACGTGCAGCAATGCCGATGAGACCTT...CTGAGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | ATTTTTGTTCCTGTTTTGAGTCCAACTTTAGACTGCAGCCAGCAAGCAGAGTTCGGACCATCACAGCCTTaGTCACCACACTCGGGATGG | + |
Preference number: 5 (lower is better) Translates to: IFVPVLSPTLDCSQQAEFGPSQP*SPHSGW Trigger: CCATCCCGAGTGTGGTGACAAAGGCTGTGATGGTCC...GAACTCTGCTTGCTGGCTGCAGTCTAAAGTTGGACTCAAAACAGGAACAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 90 bp | ATATCTCGGGGATGGGTCATAATCATTTCCATTGACATCGTAGCTTaGATAGGAATCGTAGTTGGGGGCCAGGTCTGGGTGATTCCTTTC | + |
Preference number: 5 (lower is better) Translates to: ISRGWVIIISIDIVA*IGIVVGGQVWVIPF Trigger: GAAAGGAATCACCCAGACCTGGCCCCCAACTACGATTCCTATGCAAGCTACGATGTCAATGGAAATGATTATGACCCATCCCCGAGATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCGCGCTTCACTTCCTGTaGTTGCAGCCATTTTACCTG | + |
Preference number: 5 (lower is better) Translates to: VQGDFCQFSHISLRATSTALHFL*LQPFYL Trigger: CAGGTAAAATGGCTGCAACAACAGGAAGTGAAGCGC...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GTTCAAGGGGATTTTTGTCAATTTAGCCACATATCCTTAAGGGCCACCTCCACCAGGTCAACTGGTTGTTaGCTTCTAGAGCCAAGGCAA | + |
Preference number: 5 (lower is better) Translates to: VQGDFCQFSHISLRATSTRSTGC*LLEPRQ Trigger: TTGCCTTGGCTCTAGAAGCAAACAACCAGTTGACCT...GGTGGAGGTGGCCCTTAAGGATATGTGGCTAAATTGACAAAAATCCCCTTGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCTCCAGGTCAACTGGTaGTTTGCTTCTAGAGCCAAG | + |
Preference number: 5 (lower is better) Translates to: MWRETRLGKFKASVIPLALQVNW*FASRAK Trigger: CTTGGCTCTAGAAGCAAACAACCAGTTGACCTGGAG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS-3UTR CAA 90 bp | ATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTAGCTCTTCACTTCCTGTTGTaGCAGCCATTTTACCTGTGG | + |
Preference number: 5 (lower is better) Translates to: MWRETRLGKFKASVIPLALHFLL*QPFYLW Trigger: CCACAGGTAAAATGGCTGCAACAACAGGAAGTGAAG...AGCTAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | GGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCAGCCACACATTTCCAGTCTaGGAAGTGGAAGCTTTTTGC | + |
Preference number: 5 (lower is better) Translates to: GRKINPALSCRLVPYWTSHTFPV*EVEAFC Trigger: GCAAAAAGCTTCCACTTCCAAGACTGGAAATGTGTG...GCTGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTTTGCTGCACGTGTGGTaGGTGATGCAGGAGGTTCCC | + |
Preference number: 5 (lower is better) Translates to: FASLISYLKCGFNRQQLSLLHVW*VMQEVP Trigger: GGGAACCTCCTGCATCACCAACCACACGTGCAGCAA...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | ACCATGTGGAGAGAGACGAGGTTGGGGAAATTTAAGGCAAGTGTTATTCCCTTATTCTTTCAGCTTTCCTaGTTTCTCTGGGTTTCGGAC | + |
Preference number: 5 (lower is better) Translates to: TMWRETRLGKFKASVIPLFFQLS*FLWVSD Trigger: GTCCGAAACCCAGAGAAACAAGGAAAGCTGAAAGAA...TAAGGGAATAACACTTGCCTTAAATTTCCCCAACCTCGTCTCTCTCCACATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TTGGCAGAAAAATCAATCCAGCTCTATCATGTAGGCTTGTACCATACTGGACCATTCTTTCAGCTTTCCTaGTTTCTCTGGGTTTCGGAC | + |
Preference number: 5 (lower is better) Translates to: LAEKSIQLYHVGLYHTGPFFQLS*FLWVSD Trigger: GTCCGAAACCCAGAGAAACAAGGAAAGCTGAAAGAA...TGGTCCAGTATGGTACAAGCCTACATGATAGAGCTGGATTGATTTTTCTGCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS-3UTR CAA 90 bp | TTTGCTTCACTGATTTCTTATTTGAAGTGTGGATTCAACAGACAACAGCTGAGTTTCTTTCAGCTTTCCTaGTTTCTCTGGGTTTCGGAC | + |
Preference number: 5 (lower is better) Translates to: FASLISYLKCGFNRQQLSFFQLS*FLWVSD Trigger: GTCCGAAACCCAGAGAAACAAGGAAAGCTGAAAGAA...ACTCAGCTGTTGTCTGTTGAATCCACACTTCAAATAAGAAATCAGTGAAGCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 72 bp | CGCCGGGGCCGCCCAGCACTTGCACTGCCCAGTGGTTaGTGTAGACGGGGCGCGGCGGCGGCAGCGCGGAGC | + |
Preference number: 6 (lower is better) Translates to: RRGRPALALPSG*CRRGAAAAARS Trigger: GCTCCGCGCTGCCGCCGCCGCGCCCCGTCTACACCAACCACTGGGCAGTGCAAGTGCTGGGCGGCCCCGGCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS GCA 72 bp | GCCTGGGGTGGTTGTCCAGCAGCCTTGGGAGGCTCCTaGTCCGGGACGGAGAGCTCCAGCATCCGTGAGCGA | + |
Preference number: 6 (lower is better) Translates to: AWGGCPAALGGS*SGTESSSIRER Trigger: TCGCTCACGGATGCTGGAGCTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 72 bp | CTCCTGGGCCTTTTGTCTGCGGTGGCCACGCATACGTaGTGGGAGGGCACTGCCGTCCACTTCCTCGCCTCC | + |
Preference number: 6 (lower is better) Translates to: LLGLLSAVATHT*WEGTAVHFLAS Trigger: GGAGGCGAGGAAGTGGACGGCAGTGCCCTCCCAGCACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CCA 72 bp | CTGGGCCTTTTGTCTGCGGTGGCCACGCATACGTGCTaGGAGGGCACTGCCGTCCACTTCCTCGCCTCCAGG | + |
Preference number: 6 (lower is better) Translates to: LGLLSAVATHTC*EGTAVHFLASR Trigger: CCTGGAGGCGAGGAAGTGGACGGCAGTGCCCTCCCAGCACGTATGCGTGGCCACCGCAGACAAAAGGCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CCA 72 bp | CTGGAGTCTCTGCCTGGGGTGGTTGTCCAGCAGCCTTaGGAGGCTCCTGCTCCGGGACGGAGAGCTCCAGCA | + |
Preference number: 6 (lower is better) Translates to: LESLPGVVVQQP*EAPAPGRRAPA Trigger: TGCTGGAGCTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 72 bp | GGCGACAAGACAGGCACTGTGCTGGGCTCCTGCCCGTaGACGTCTCACATCCCTTATGGCAGCGACGGCAGC | + |
Preference number: 6 (lower is better) Translates to: GDKTGTVLGSCP*TSHIPYGSDGS Trigger: GCTGCCGTCGCTGCCATAAGGGATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCTTGTCGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 72 bp | GCACTATGGGGATGCTCCTGGGCCTTTTGTCTGCGGTaGCCACGCATACGTGCTGGGAGGGCACTGCCGTCC | + |
Preference number: 6 (lower is better) Translates to: ALWGCSWAFCLR*PRIRAGRALPS Trigger: GGACGGCAGTGCCCTCCCAGCACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CCA 72 bp | GCTGGGCTCCTGCCCGTGCACGTCTCACATCCCTTATaGCAGCGACGGCAGCGTCTTGCAGCTGCATCCCCA | + |
Preference number: 6 (lower is better) Translates to: AGLLPVHVSHPL*QRRQRLAAASP Trigger: TGGGGATGCAGCTGCAAGACGCTGCCGTCGCTGCCATAAGGGATGTGAGACGTGCACGGGCAGGAGCCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 90 bp | GCTGTGGTCCGTAGCACCTGCACTATGGGGATGCTCCTGGGCCTTTaGTCTGCGGTGGCCACGCATACGTGCTGGGAGGGCACTGCCGTC | + |
Preference number: 6 (lower is better) Translates to: AVVRSTCTMGMLLGL*SAVATHTCWEGTAV Trigger: GACGGCAGTGCCCTCCCAGCACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CAA 90 bp | TCCTCGTCTTCTGGAGTCTCTGCCTGGGGTGGTTGTCCAGCAGCCTaGGGAGGCTCCTGCTCCGGGACGGAGAGCTCCAGCATCCGTGAG | + |
Preference number: 6 (lower is better) Translates to: SSSSGVSAWGGCPAA*GGSCSGTESSSIRE Trigger: CTCACGGATGCTGGAGCTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 72 bp | CACCTGCACTATGGGGATGCTCCTGGGCCTTTTGTCTaGGGTGGCCACGCATACGTGCTGGGAGGGCACTGC | + |
Preference number: 6 (lower is better) Translates to: HLHYGDAPGPFV*GGHAYVLGGHC Trigger: GCAGTGCCCTCCCAGCACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS GCA 72 bp | ACCCACGGCGACAAGACAGGCACTGTGCTGGGCTCCTaGCCGTGCACGTCTCACATCCCTTATGGCAGCGAC | + |
Preference number: 6 (lower is better) Translates to: THGDKTGTVLGS*PCTSHIPYGSD Trigger: GTCGCTGCCATAAGGGATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCTTGTCGCCGTGGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 72 bp | GGTCTGAGTGGTCCGCACAGGCGTTGGTCAGGGCTGTaGTCCGTAGCACCTGCACTATGGGGATGCTCCTGG | + |
Preference number: 6 (lower is better) Translates to: GLSGPHRRWSGL*SVAPALWGCSW Trigger: CCAGGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTCAGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CAA 72 bp | CTCTTCCTCGTCTTCTGGAGTCTCTGCCTGGGGTGGTaGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGGGAC | + |
Preference number: 6 (lower is better) Translates to: LFLVFWSLCLGW*SSSLGRLLLRD Trigger: GTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 90 bp | TGCTCCAGGTACACCACACGCTGGTCTGAGTGGTCCGCACAGGCGTaGGTCAGGGCTGTGGTCCGTAGCACCTGCACTATGGGGATGCTC | + |
Preference number: 6 (lower is better) Translates to: CSRYTTRWSEWSAQA*VRAVVRSTCTMGML Trigger: GAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTCAGACCAGCGTGTGGTGTACCTGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 90 bp | AGCTGTGTACTCTTCCTCGTCTTCTGGAGTCTCTGCCTGGGGTGGTaGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGGGACGGAGAGCTC | + |
Preference number: 6 (lower is better) Translates to: SCVLFLVFWSLCLGW*SSSLGRLLLRDGEL Trigger: GAGCTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS CAA 90 bp | TGCCCGTGCACGTCTCACATCCCTTATGGCAGCGACGGCAGCGTCTaGCAGCTGCATCCCCAAAGTAGCCCAAGGGGCACTCGCTCACAC | + |
Preference number: 6 (lower is better) Translates to: CPCTSHIPYGSDGSV*QLHPQSSPRGTRSH Trigger: GTGTGAGCGAGTGCCCCTTGGGCTACTTTGGGGATGCAGCTGCAAGACGCTGCCGTCGCTGCCATAAGGGATGTGAGACGTGCACGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 90 bp | ACCTGTGTACTCTTCCTCGTCTTCTGGAGTCTCTGCCTGGGGTGGTaGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGGGACGGAGAGCTC | + |
Preference number: 6 (lower is better) Translates to: TCVLFLVFWSLCLGW*SSSLGRLLLRDGEL Trigger: GAGCTCTCCGTCCCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTACACAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098391.11 |
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CDS TCA 72 bp | TCCGGGACGGAGAGCTCCAGCATCCGTGAGCGAGACTaGTGGGAGCTGAAGGTGCGATATGGGTGCTCTGCG | + |
Preference number: 6 (lower is better) Translates to: SGTESSSIRERD*WELKVRYGCSA Trigger: CGCAGAGCACCCATATCGCACCTTCAGCTCCCATCAGTCTCGCTCACGGATGCTGGAGCTCTCCGTCCCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | AGGCTCCTGCTCCGGGACGGAGAGCTCCAGCATCCGTaGGCGAGACTGATGGGAGCTGAAGGTGCGATATGG | + |
Preference number: 6 (lower is better) Translates to: RLLLRDGELQHP*ARLMGAEGAIW Trigger: CCATATCGCACCTTCAGCTCCCATCAGTCTCGCTCACGGATGCTGGAGCTCTCCGTCCCGGAGCAGGAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 72 bp | GCACAGGCGTTGGTCAGGGCTGTGGTCCGTAGCACCTaGACTATGGGGATGCTCCTGGGCCTTTTGTCTGCG | + |
Preference number: 6 (lower is better) Translates to: AQALVRAVVRST*TMGMLLGLLSA Trigger: CGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CCA 72 bp | ACCACATGCTCCAGGTACACCACACGCTGGTCTGAGTaGTCCGCACAGGCGTTGGTCAGGGCTGTGGTCCGT | + |
Preference number: 6 (lower is better) Translates to: TTCSRYTTRWSE*SAQALVRAVVR Trigger: ACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTCAGACCAGCGTGTGGTGTACCTGGAGCATGTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 72 bp | GTACTCTTCCTCGTCTTCTGGAGTCTCTGCCTGGGGTaGTTGTCCAGCAGCCTTGGGAGGCTCCTGCTCCGG | + |
Preference number: 6 (lower is better) Translates to: VLFLVFWSLCLG*LSSSLGRLLLR Trigger: CCGGAGCAGGAGCCTCCCAAGGCTGCTGGACAACCACCCCAGGCAGAGACTCCAGAAGACGAGGAAGAGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | TGTGGCCGTCGGTGCAGCGCTGACGCAGATCTGTGGTaGCGATCTTCCGTTCATAGAAGGCCCCGCTGCTGT | + |
Preference number: 6 (lower is better) Translates to: CGRRCSADADLW*RSSVHRRPRCC Trigger: ACAGCAGCGGGGCCTTCTATGAACGGAAGATCGTCACCACAGATCTGCGTCAGCGCTGCACCGACGGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | GACAACCACATGCTCCAGGTACACCACACGCTGGTCTaGGTGGTCCGCACAGGCGTTGGTCAGGGCTGTGGT | + |
Preference number: 6 (lower is better) Translates to: DNHMLQVHHTLV*VVRTGVGQGCG Trigger: ACCACAGCCCTGACCAACGCCTGTGCGGACCACTCAGACCAGCGTGTGGTGTACCTGGAGCATGTGGTTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 72 bp | ACATCCCTTATGGCAGCGACGGCAGCGTCTTGCAGCTaGATCCCCAAAGTAGCCCAAGGGGCACTCGCTCAC | + |
Preference number: 6 (lower is better) Translates to: TSLMAATAASCS*IPKVAQGALAH Trigger: GTGAGCGAGTGCCCCTTGGGCTACTTTGGGGATGCAGCTGCAAGACGCTGCCGTCGCTGCCATAAGGGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 72 bp | GTGGTGATAGAACCCACGGCGACAAGACAGGCACTGTaGTGGGCTCCTGCCCGTGCACGTCTCACATCCCTT | + |
Preference number: 6 (lower is better) Translates to: VVIEPTATRQAL*WAPARARLTSL Trigger: AAGGGATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCTTGTCGCCGTGGGTTCTATCACCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 72 bp | CTGTGGTCCGTAGCACCTGCACTATGGGGATGCTCCTaGGCCTTTTGTCTGCGGTGGCCACGCATACGTGCT | + |
Preference number: 6 (lower is better) Translates to: LWSVAPALWGCS*AFCLRWPRIRA Trigger: AGCACGTATGCGTGGCCACCGCAGACAAAAGGCCCAGGAGCATCCCCATAGTGCAGGTGCTACGGACCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS CCA 72 bp | GGTCTGAGTGGTCCGCACAGGCGTTGGTCAGGGCTGTaGTCCGTAGCACCTGCACTATGGGGATGCTCTTTG | + |
Preference number: 6 (lower is better) Translates to: GLSGPHRRWSGL*SVAPALWGCSL Trigger: CAAAGAGCATCCCCATAGTGCAGGTGCTACGGACCACAGCCCTGACCAACGCCTGTGCGGACCACTCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176209.2 |
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CDS CCA 72 bp | GTGATAGAACCCACGGCGACAAGACAGGCACTGTGCTaGGCTCCTGCCCGTGCACGTCTCACATCCCTTATG | + |
Preference number: 6 (lower is better) Translates to: VIEPTATRQALC*APARARLTSLM Trigger: CATAAGGGATGTGAGACGTGCACGGGCAGGAGCCCAGCACAGTGCCTGTCTTGTCGCCGTGGGTTCTATCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 72 bp | GAGGCAGCGACTTCACCCGCACAGCGAGTGCCATGTTaGTTCTCGTTGCTGGCGTCATATCTCGGGGATGGG | + |
Preference number: 6 (lower is better) Translates to: EAATSPAQRVPC*FSLLASYLGDG Trigger: CCCATCCCCGAGATATGACGCCAGCAACGAGAACAAACATGGCACTCGCTGTGCGGGTGAAGTCGCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS CAA 72 bp | ACGTCTCACATCCCTTATGGCAGCGACGGCAGCGTCTaGCAGCTGCATCCCCAAAGTAGCCCAAGGGGCACT | + |
Preference number: 6 (lower is better) Translates to: TSHIPYGSDGSV*QLHPQSSPRGT Trigger: AGTGCCCCTTGGGCTACTTTGGGGATGCAGCTGCAAGACGCTGCCGTCGCTGCCATAAGGGATGTGAGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | GACTTTCCAGTCGCTCGCCTTCAGATGAGCTGGCCGTaGTGTCTTCACCAGCAGGTGCTGCACATCCCTCCA | + |
Preference number: 6 (lower is better) Translates to: DFPVARLQMSWP*CLHQQVLHIPP Trigger: TGGAGGGATGTGCAGCACCTGCTGGTGAAGACATCACGGCCAGCTCATCTGAAGGCGAGCGACTGGAAAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 |
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CDS GCA 72 bp | TGTTGGCCGAGGCAGCGACTTCACCCGCACAGCGAGTaGCATGTTTGTTCTCGTTGCTGGCGTCATATCTCG | + |
Preference number: 6 (lower is better) Translates to: CWPRQRLHPHSE*HVCSRCWRHIS Trigger: CGAGATATGACGCCAGCAACGAGAACAAACATGGCACTCGCTGTGCGGGTGAAGTCGCTGCCTCGGCCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS GCA 72 bp | CGGCGTGGGTGTGAGATAGAGATTCGGACAACCACATaGTCCAGGTACACCACACGCTGGTCTGAGTGGTCC | + |
Preference number: 6 (lower is better) Translates to: RRGCEIEIRTTT*SRYTTRWSEWS Trigger: GGACCACTCAGACCAGCGTGTGGTGTACCTGGAGCATGTGGTTGTCCGAATCTCTATCTCACACCCACGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 72 bp | TCGCAGAAGGTCTCATCGGCATTGCTGCACGTGTGGTaGGTGATGCAGGAGGTTCCCAGCTGTGTGAAGCCG | + |
Preference number: 6 (lower is better) Translates to: SQKVSSALLHVW*VMQEVPSCVKP Trigger: CGGCTTCACACAGCTGGGAACCTCCTGCATCACCAACCACACGTGCAGCAATGCCGATGAGACCTTCTGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | AGAGCTCCAGCATCCGTGAGCGAGACTGATGGGAGCTaGAGGTGCGATATGGGTGCTCTGCGGTGCCATATA | + |
Preference number: 6 (lower is better) Translates to: RAPASVSETDGS*RCDMGALRCHI Trigger: TATATGGCACCGCAGAGCACCCATATCGCACCTTCAGCTCCCATCAGTCTCGCTCACGGATGCTGGAGCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | GTTCACAGTCCGGAATGCAGCTGCCCCGTGCCAGGCTaGATCCCTCCTTACACACAGTGCACTTCTCAGGTT | + |
Preference number: 6 (lower is better) Translates to: VHSPECSCPVPG*IPPYTQCTSQV Trigger: AACCTGAGAAGTGCACTGTGTGTAAGGAGGGATTCAGCCTGGCACGGGGCAGCTGCATTCCGGACTGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 90 bp | GTGCGGCAGCAAAACTGGATGAAGAGCTTCCGTTCGCAGAGCCGATaGGACTTCACCATCTCGCAGAAGGTCTCATCGGCATTGCTGCAC | + |
Preference number: 6 (lower is better) Translates to: VRQQNWMKSFRSQSR*DFTISQKVSSALLH Trigger: GTGCAGCAATGCCGATGAGACCTTCTGCGAGATGGTGAAGTCCAATCGGCTCTGCGAACGGAAGCTCTTCATCCAGTTTTGCTGCCGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | AATCAGGTGGATCTGGAGATCGCCCCGGCGTGGGTGTaGGATAGAGATTCGGACAACCACATGCTCCAGGTA | + |
Preference number: 6 (lower is better) Translates to: NQVDLEIAPAWV*DRDSDNHMLQV Trigger: TACCTGGAGCATGTGGTTGTCCGAATCTCTATCTCACACCCACGCCGGGGCGATCTCCAGATCCACCTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | CACAGGTCCGGCAGGTGTGATGGCATTCCCCACATTTaGCGAGCTCTGAATCGAAGTAGGTACCCGGTTCAC | + |
Preference number: 6 (lower is better) Translates to: HRSGRCDGIPHI*RALNRSRYPVH Trigger: GTGAACCGGGTACCTACTTCGATTCAGAGCTCGTCAAATGTGGGGAATGCCATCACACCTGCCGGACCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 72 bp | CCACCACATCGGTCACATCGCCGTCCAGCATCCGGATaGCTCCTATCTTTGCATTATATGCGATGCCCACGA | + |
Preference number: 6 (lower is better) Translates to: PPHRSHRRPASG*LLSLHYMRCPR Trigger: TCGTGGGCATCGCATATAATGCAAAGATAGGAGGCATCCGGATGCTGGACGGCGATGTGACCGATGTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS CAA 90 bp | TGGACACAGTTCAAGCACTGGTCTGCATTGGGACCATCACAGCCTTaGTCACCACACTCGGGATGGCACACACCTGTGTACTCTTCCTCG | + |
Preference number: 6 (lower is better) Translates to: WTQFKHWSALGPSQP*SPHSGWHTPVYSSS Trigger: CGAGGAAGAGTACACAGGTGTGTGCCATCCCGAGTGTGGTGACAAAGGCTGTGATGGTCCCAATGCAGACCAGTGCTTGAACTGTGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098391.11 |
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CDS TCA 72 bp | GTAGCCACGCTTCCACGCCGCCTGGACGTTCATCTCTaGCCGACAGCGACTGTTCTTATCAGTACAATGCAT | + |
Preference number: 6 (lower is better) Translates to: VATLPRRLDVHL*PTATVLISTMH Trigger: ATGCATTGTACTGATAAGAACAGTCGCTGTCGGTCAGAGATGAACGTCCAGGCGGCGTGGAAGCGTGGCTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS GCA 72 bp | GCATCCGGATGCCTCCTATCTTTGCATTATATGCGATaGCCACGATGCAGTAGGAGTTGTTGGCCGAGGCAG | + |
Preference number: 6 (lower is better) Translates to: ASGCLLSLHYMR*PRCSRSCWPRQ Trigger: CTGCCTCGGCCAACAACTCCTACTGCATCGTGGGCATCGCATATAATGCAAAGATAGGAGGCATCCGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS CCA 72 bp | GAGTTCCCCAGGCTGAAGTGGACACAGTTCAAGCACTaGTCTGCATTGGGACCATCACAGCCTTTGTCACCA | + |
Preference number: 6 (lower is better) Translates to: EFPRLKWTQFKH*SALGPSQPLSP Trigger: TGGTGACAAAGGCTGTGATGGTCCCAATGCAGACCAGTGCTTGAACTGTGTCCACTTCAGCCTGGGGAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 72 bp | TTGGGACCATCACAGCCTTTGTCACCACACTCGGGATaGCACACACCTGTGTACTCTTCCTCGTCTTCTGGA | + |
Preference number: 6 (lower is better) Translates to: LGPSQPLSPHSG*HTPVYSSSSSG Trigger: TCCAGAAGACGAGGAAGAGTACACAGGTGTGTGCCATCCCGAGTGTGGTGACAAAGGCTGTGATGGTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098391.11 |
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CDS CAA 72 bp | TTCAAGCACTGGTCTGCATTGGGACCATCACAGCCTTaGTCACCACACTCGGGATGGCACACACTGGTCTGT | + |
Preference number: 6 (lower is better) Translates to: FKHWSALGPSQP*SPHSGWHTLVC Trigger: ACAGACCAGTGTGTGCCATCCCGAGTGTGGTGACAAAGGCTGTGATGGTCCCAATGCAGACCAGTGCTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS CAA 72 bp | TTCAAGCACTGGTCTGCATTGGGACCATCACAGCCTTaGTCACCACACTCGGGATGGCACACACCTGTGTAC | + |
Preference number: 6 (lower is better) Translates to: FKHWSALGPSQP*SPHSGWHTPVY Trigger: GTACACAGGTGTGTGCCATCCCGAGTGTGGTGACAAAGGCTGTGATGGTCCCAATGCAGACCAGTGCTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098391.11 |
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CDS CAA 90 bp | GGAGCCCAGACCTTGGCGACCCTTTTTAATGCCATACTCGAAAGCTaGTTTAGCCAGCCGGCCTGGTCCATCTACTGTCTTTCCGTCATC | + |
Preference number: 6 (lower is better) Translates to: GAQTLATLFNAILES*FSQPAWSIYCLSVI Trigger: GATGACGGAAAGACAGTAGATGGACCAGGCCGGCTGGCTAAACAAGCTTTCGAGTATGGCATTAAAAAGGGTCGCCAAGGTCTGGGCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 90 bp | CTCCGGGTAGAAGCCCTCACCGCAGGCCGGCACACATTTCCAGTCTaGGAAGTGGAAGCTTTTTGCACAGTGAATACACTCTTCTCTGCT | + |
Preference number: 6 (lower is better) Translates to: LRVEALTAGRHTFPV*EVEAFCTVNTLFSA Trigger: AGCAGAGAAGAGTGTATTCACTGTGCAAAAAGCTTCCACTTCCAAGACTGGAAATGTGTGCCGGCCTGCGGTGAGGGCTTCTACCCGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | CTGGGTGATTCCTTTCTATGCCGTCATCGAGGATGGTaGCGACCACATTCTTTCCTGTGTAGCCACGCTTCC | + |
Preference number: 6 (lower is better) Translates to: LGDSFLCRHRGW*RPHSFLCSHAS Trigger: GGAAGCGTGGCTACACAGGAAAGAATGTGGTCGTCACCATCCTCGATGACGGCATAGAAAGGAATCACCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS TCA 72 bp | GTTCATCCACGCACTTCTGACAGCTCGGGTGGCACCTaGGGCAGAGTCTCTGACTTTCATCAGCATAAAGTC | + |
Preference number: 6 (lower is better) Translates to: VHPRTSDSSGGT*GRVSDFHQHKV Trigger: GACTTTATGCTGATGAAAGTCAGAGACTCTGCCTCAGGTGCCACCCGAGCTGTCAGAAGTGCGTGGATGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS TCA 72 bp | GCAGGTGTGATGGCATTCCCCACATTTGACGAGCTCTaGATCGAAGTAGGTACCCGGTTCACAGTCCGGAAT | + |
Preference number: 6 (lower is better) Translates to: AGVMAFPTFDEL*IEVGTRFTVRN Trigger: ATTCCGGACTGTGAACCGGGTACCTACTTCGATTCAGAGCTCGTCAAATGTGGGGAATGCCATCACACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 72 bp | TGCCTCCTATCTTTGCATTATATGCGATGCCCACGATaGAGTAGGAGTTGTTGGCCGAGGCAGCGACTTCAC | + |
Preference number: 6 (lower is better) Translates to: CLLSLHYMRCPR*SRSCWPRQRLH Trigger: GTGAAGTCGCTGCCTCGGCCAACAACTCCTACTGCATCGTGGGCATCGCATATAATGCAAAGATAGGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS GCA 72 bp | GTCCAGCATCCGGATGCCTCCTATCTTTGCATTATATaGGATGCCCACGATGCAGTAGGAGTTGTTGGCCGA | + |
Preference number: 6 (lower is better) Translates to: VQHPDASYLCII*DAHDAVGVVGR Trigger: TCGGCCAACAACTCCTACTGCATCGTGGGCATCGCATATAATGCAAAGATAGGAGGCATCCGGATGCTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS CCA 72 bp | GTAGCTTGCATAGGAATCGTAGTTGGGGGCCAGGTCTaGGTGATTCCTTTCTATGCCGTCATCGAGGATGGT | + |
Preference number: 6 (lower is better) Translates to: VACIGIVVGGQV*VIPFYAVIEDG Trigger: ACCATCCTCGATGACGGCATAGAAAGGAATCACCCAGACCTGGCCCCCAACTACGATTCCTATGCAAGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS CCA 72 bp | CACCCGCACAGCGAGTGCCATGTTTGTTCTCGTTGCTaGCGTCATATCTCGGGGATGGGTCATAATCATTTC | + |
Preference number: 6 (lower is better) Translates to: HPHSECHVCSRC*RHISGMGHNHF Trigger: GAAATGATTATGACCCATCCCCGAGATATGACGCCAGCAACGAGAACAAACATGGCACTCGCTGTGCGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS CCA 72 bp | AATGCCATACTCGAAAGCTTGTTTAGCCAGCCGGCCTaGTCCATCTACTGTCTTTCCGTCATCATCGGGTCC | + |
Preference number: 6 (lower is better) Translates to: NAILESLFSQPA*SIYCLSVIIGS Trigger: GGACCCGATGATGACGGAAAGACAGTAGATGGACCAGGCCGGCTGGCTAAACAAGCTTTCGAGTATGGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 72 bp | CAGCTTTCCTTGTTTCTCTGGGTTTCGGACCTGCGATaGTATATCCTGCACTTCCAGAGTCCACTCCCCTTC | + |
Preference number: 6 (lower is better) Translates to: QLSLFLWVSDLR*YILHFQSPLPF Trigger: GAAGGGGAGTGGACTCTGGAAGTGCAGGATATACCATCGCAGGTCCGAAACCCAGAGAAACAAGGAAAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 72 bp | GAAGCCCTCACCGCAGGCCGGCACACATTTCCAGTCTaGGAAGTGGAAGCTTTTTGCACAGTGAATACACTC | + |
Preference number: 6 (lower is better) Translates to: EALTAGRHTFPV*EVEAFCTVNTL Trigger: GAGTGTATTCACTGTGCAAAAAGCTTCCACTTCCAAGACTGGAAATGTGTGCCGGCCTGCGGTGAGGGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 72 bp | CAAAACTGGATGAAGAGCTTCCGTTCGCAGAGCCGATaGGACTTCACCATCTCGCAGAAGGTCTCATCGGCA | + |
Preference number: 6 (lower is better) Translates to: QNWMKSFRSQSR*DFTISQKVSSA Trigger: TGCCGATGAGACCTTCTGCGAGATGGTGAAGTCCAATCGGCTCTGCGAACGGAAGCTCTTCATCCAGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 90 bp | TGGACACAGTTCAAGCACTGGTCTGCATTGGGACCATCACAGCCTTaGTCACCACACTCGGGATGGCACACACTGGTCTGTAAAGTATTA | + |
Preference number: 6 (lower is better) Translates to: WTQFKHWSALGPSQP*SPHSGWHTLVCKVL Trigger: TAATACTTTACAGACCAGTGTGTGCCATCCCGAGTGTGGTGACAAAGGCTGTGATGGTCCCAATGCAGACCAGTGCTTGAACTGTGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS TCA 72 bp | CATTTCCAGTCTTGGAAGTGGAAGCTTTTTGCACAGTaGATACACTCTTCTCTGCTGGGCCCCACACAGGTC | + |
Preference number: 6 (lower is better) Translates to: HFQSWKWKLFAQ*IHSSLLGPTQV Trigger: GACCTGTGTGGGGCCCAGCAGAGAAGAGTGTATTCACTGTGCAAAAAGCTTCCACTTCCAAGACTGGAAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS GCA 72 bp | GGATGGGTCATAATCATTTCCATTGACATCGTAGCTTaGATAGGAATCGTAGTTGGGGGCCAGGTCTGGGTG | + |
Preference number: 6 (lower is better) Translates to: GWVIIISIDIVA*IGIVVGGQVWV Trigger: CACCCAGACCTGGCCCCCAACTACGATTCCTATGCAAGCTACGATGTCAATGGAAATGATTATGACCCATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS GCA 72 bp | TCTTTCAGCTTTCCTTGTTTCTCTGGGTTTCGGACCTaGGATGGTATATCCTGCACTTCCAGAGTCCACTCC | + |
Preference number: 6 (lower is better) Translates to: SFSFPCFSGFRT*DGISCTSRVHS Trigger: GGAGTGGACTCTGGAAGTGCAGGATATACCATCGCAGGTCCGAAACCCAGAGAAACAAGGAAAGCTGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CAA 72 bp | ACCTTGGCGACCCTTTTTAATGCCATACTCGAAAGCTaGTTTAGCCAGCCGGCCTGGTCCATCTACTGTCTT | + |
Preference number: 6 (lower is better) Translates to: TLATLFNAILES*FSQPAWSIYCL Trigger: AAGACAGTAGATGGACCAGGCCGGCTGGCTAAACAAGCTTTCGAGTATGGCATTAAAAAGGGTCGCCAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |
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CDS CCA 72 bp | TGGCACACACTGGTCTGTAAAGTATTAGGAGAGCCTTaGATGGAAGGAGCTGTGTACTCTTCCTCGTCTTCT | + |
Preference number: 6 (lower is better) Translates to: WHTLVCKVLGEP*MEGAVYSSSSS Trigger: AGAAGACGAGGAAGAGTACACAGCTCCTTCCATCCAAGGCTCTCCTAATACTTTACAGACCAGTGTGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055576.12 ENSMUST00000176209.2 |
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CDS TCA 72 bp | CGTCATATCTCGGGGATGGGTCATAATCATTTCCATTaGCATCGTAGCTTGCATAGGAATCGTAGTTGGGGG | + |
Preference number: 6 (lower is better) Translates to: RHISGMGHNHFH*HRSLHRNRSWG Trigger: CCCCCAACTACGATTCCTATGCAAGCTACGATGTCAATGGAAATGATTATGACCCATCCCCGAGATATGACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176199.8 ENSMUST00000176209.2 |
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CDS TCA 72 bp | AGGTGCGATATGGGTGCTCTGCGGTGCCATATAAAATaGGGCTCCATTCTTTCAGCTTTCCTTGTTTCTCTG | + |
Preference number: 6 (lower is better) Translates to: RCDMGALRCHIK*GSILSAFLVSL Trigger: CAGAGAAACAAGGAAAGCTGAAAGAATGGAGCCTCATTTTATATGGCACCGCAGAGCACCCATATCGCACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055576.12 ENSMUST00000098391.11 ENSMUST00000176209.2 |