RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCSK5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024713

Ensembl transcript IDs: ENSMUST00000025618.16, ENSMUST00000050715.10

Found 528 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCACCGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTaGGGGACCCAGATCAGCCTCAGCCCTTCTGGCTATCACATGCTT +
Preference number: 1 (lower is better)
Translates to: STERLCRVYLSLSGL*GTQISLSPSGYHML
Trigger: AAGCATGTGATAGCCAGAAGGGCTGAGGCTGATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR CCA 90 bp TATGGTTCTGGGTTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTaGACTGTCAGCTCTGAGGCTGCTAATCCTTTCAGTATAGATGGG +
Preference number: 1 (lower is better)
Translates to: YGSGFLQRSWGPASV*TVSSEAANPFSIDG
Trigger: CCCATCTATACTGAAAGGATTAGCAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAACCCAGAACCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR TCA 90 bp AGATGCCTGGCCATGCTCCCAGTCAATGAGGTCACCAAGGAGATTTaGGAGGAAAAACGAAGGAGTGGGATATCAGCTATCCTCCAAGGA +
Preference number: 1 (lower is better)
Translates to: RCLAMLPVNEVTKEI*EEKRRSGISAILQG
Trigger: TCCTTGGAGGATAGCTGATATCCCACTCCTTCGTTTTTCCTCTCAAATCTCCTTGGTGACCTCATTGACTGGGAGCATGGCCAGGCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR CCA 90 bp CTTCCTATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTaGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCC +
Preference number: 1 (lower is better)
Translates to: LPIKEALRKSQGGKS*KQFPSFWPWCCLPS
Trigger: GGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGATAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR CCA 90 bp AAGACCATCACTCACTCTCTTCTTAGCAGTGAAGCCACAGCAACTTaGAAGTGTAGCTTCCCAAAGCTTAGAACCTGGAGATGCCTGGCC +
Preference number: 1 (lower is better)
Translates to: KTITHSLLSSEATAT*KCSFPKLRTWRCLA
Trigger: GGCCAGGCATCTCCAGGTTCTAAGCTTTGGGAAGCTACACTTCCAAGTTGCTGTGGCTTCACTGCTAAGAAGAGAGTGAGTGATGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR GCA 90 bp AAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATaGAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCA +
Preference number: 1 (lower is better)
Translates to: KAAQQTPASLHIRVG*KVRTKANTQTSANA
Trigger: TGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR CCA 90 bp ATGAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTaGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAA +
Preference number: 1 (lower is better)
Translates to: MKSSTADSSIPTYSG*MQGKDKSKHSDLSQ
Trigger: TTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR TCA 90 bp GAAGGTAGCAGTTGTGGGGATGAGAGTGAGTCTCCAACTACAGTTTaGAAGCAGAACCCTTACAGGTCCTCTTCTCCATCCACTTTAAAA +
Preference number: 1 (lower is better)
Translates to: EGSSCGDESESPTTV*KQNPYRSSSPSTLK
Trigger: TTTTAAAGTGGATGGAGAAGAGGACCTGTAAGGGTTCTGCTTTCAAACTGTAGTTGGAGACTCACTCTCATCCCCACAACTGCTACCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR GCA 90 bp GTGCATTTAAACATAAGGAGAATACACGACGGCCAGGTTTCCCTCTaGTCTTCCAGTGAGAAGAGCCTACAGTGTTCTAAAGAAGAACAC +
Preference number: 1 (lower is better)
Translates to: VHLNIRRIHDGQVSL*SSSEKSLQCSKEEH
Trigger: GTGTTCTTCTTTAGAACACTGTAGGCTCTTCTCACTGGAAGAGCAGAGGGAAACCTGGCCGTCGTGTATTCTCCTTATGTTTAAATGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR TCA 90 bp TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTaGAAGTGGAGAGACCTCCCACCCCAGCTCCAACAACTCTCTAGT +
Preference number: 1 (lower is better)
Translates to: FFLSFFLSFFLSFHD*KWRDLPPQLQQLSS
Trigger: ACTAGAGAGTTGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR TCA 90 bp TACTGTTTAAGAAACTTCAAGTCCCCTTTCTTGGTCTTCACAGATTaGTTATTCTTTCTCTCTTTCTTTCTCTCTCTCTCTCTTTCCTTC +
Preference number: 1 (lower is better)
Translates to: YCLRNFKSPFLVFTD*LFFLSFFLSLSLSF
Trigger: GAAGGAAAGAGAGAGAGAGAGAAAGAAAGAGAGAAAGAATAATCAATCTGTGAAGACCAAGAAAGGGGACTTGAAGTTTCTTAAACAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR-3UTR TCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGGTGGGTGGTGGGTTTaGGATGGGAGGGGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAGGWWV*DGRGLC
Trigger: ACAGAGCCCCCTCCCATCTCAAACCCACCACCCACC...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR-3UTR GCA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCGTCAAAGGAGGTGGTTaGTCTTCAGGAGTACTGTTT +
Preference number: 2 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGVKGGG*SSGVLF
Trigger: AAACAGTACTCCTGAAGAGCAACCACCTCCTTTGAC...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR-3UTR GCA 90 bp CGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTGGGGGACCCAGATGTCCACTTCCCTGGCTaGAGAGGAAAGCCAGAAAAA +
Preference number: 2 (lower is better)
Translates to: REVVQSLSLSLWALGDPDVHFPG*RGKPEK
Trigger: TTTTTCTGGCTTTCCTCTGCAGCCAGGGAAGTGGAC...ATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR CAA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATaGGTAGCTCCCAGCAGGATTGAGAGCCAGGAAGGGACCAGGAAG +
Preference number: 2 (lower is better)
Translates to: CKVRTKANTQTSANA*VAPSRIESQEGTRK
Trigger: CTTCCTGGTCCCTTCCTGGCTCTCAATCCTGCTGGGAGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR-3UTR CCA 90 bp CTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGCTCTCTGTTCACTCCGATTTGTTTTTGCGGGGGTaGTGGTGGTGGTGGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LQRKARKMIEAKLSVHSDLFLRG*WWWWWW
Trigger: CCACCACCACCACCACCACCACCCCCGCAAAAACAA...ATCGGAGTGAACAGAGAGCTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR TCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTAGCTCCCAGCAGGATTaGGAGCCAGGAAGGGACCAG +
Preference number: 2 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPSSQQD*EPGRDQ
Trigger: CTGGTCCCTTCCTGGCTCTCAATCCTGCTGGGAGCT...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR-3UTR TCA 90 bp ATGGGGGCTTTAGCATCCACACCCCAGCTCCTTTCCAAGACCATCACTCACTCTAGGAGAAACAGTGAATaGGTGCAAAGGAATAAAATG +
Preference number: 2 (lower is better)
Translates to: MGALASTPQLLSKTITHSRRNSE*VQRNKM
Trigger: CATTTTATTCCTTTGCACTCATTCACTGTTTCTCCT...AGAGTGAGTGATGGTCTTGGAAAGGAGCTGGGGTGTGGATGCTAAAGCCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR CCA 90 bp ACATTTCATCGTTTTCAACCACAGGTTCAAAGTAGTTTCTCTACAGTCCAGTATTCTCTCTCTGGGCTTTaGGGGACCCAGATCAGCCTC +
Preference number: 2 (lower is better)
Translates to: TFHRFQPQVQSSFSTVQYSLSGL*GTQISL
Trigger: GAGGCTGATCTGGGTCCCCCAAAGCCCAGAGAGAGA...ATACTGGACTGTAGAGAAACTACTTTGAACCTGTGGTTGAAAACGATGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR TCA 90 bp AGAAAATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTCCAATTGACAGTGTTTaGAAAGCCAGTGGCAGAAAG +
Preference number: 2 (lower is better)
Translates to: RKYRARRVQSCHPHSISSPIDSV*KASGRK
Trigger: CTTTCTGCCACTGGCTTTTCAAACACTGTCAATTGG...ACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR CCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTATGTTTGAAAAGCCAGTaGCAGAAAGTCTGCCCGATG +
Preference number: 2 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLCLKSQ*QKVCPM
Trigger: CATCGGGCAGACTTTCTGCCACTGGCTTTTCAAACA...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR GCA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGGGTATTTCCGTGATGTaGACCTGCATGGTTAGTGGG +
Preference number: 2 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMGISVM*TCMVSG
Trigger: CCCACTAACCATGCAGGTGCACATCACGGAAATACC...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR GCA 90 bp AGAAAATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTGAAACAGTGAATGAGTaGAAAGGAATAAAATGGACC +
Preference number: 2 (lower is better)
Translates to: RKYRARRVQSCHPHSISSETVNE*KGIKWT
Trigger: GGTCCATTTTATTCCTTTGCACTCATTCACTGTTTC...ACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR CCA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGGGGAAGGTATCACCATaGAACTGTGAAACACCAAGA +
Preference number: 2 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMGKVSP*NCETPR
Trigger: TCTTGGTGTTTCACAGTTCCATGGTGATACCTTCCC...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR GCA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGTTGCCCAGTATGACCTaGCAGTTTCTTAGTTACTTA +
Preference number: 2 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMLPSMT*QFLSYL
Trigger: TAAGTAACTAAGAAACTGGCAGGTCATACTGGGCAA...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR GCA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACATTCGAATTCTCTCCTTaGAGGATCTGTTCATTGCAC +
Preference number: 2 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTFEFSP*RICSLH
Trigger: GTGCAATGAACAGATCCTGCAAGGAGAGAATTCGAA...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR-3UTR GCA 90 bp ACATTTCATCGTTTTCAACCACAGGTTCAAAGTAGTTTCTCTACAGTCCAGTATACTCCGATCTATGTGTaGTCTTATGATGGTTTTTGT +
Preference number: 2 (lower is better)
Translates to: TFHRFQPQVQSSFSTVQYTPIYV*SYDGFC
Trigger: ACAAAAACCATCATAAGAGCACACATAGATCGGAGT...ATACTGGACTGTAGAGAAACTACTTTGAACCTGTGGTTGAAAACGATGAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR CCA 72 bp CACCGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTaGGCTTTGGGGGACCCAGATCAGCCTCAGCCCTTC +
Preference number: 3 (lower is better)
Translates to: HREVVQSLSLSL*ALGDPDQPQPF
Trigger: GAAGGGCTGAGGCTGATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR CAA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCTCTTTCTTTCCACGATaGAAAGTGGAGAGACCTCCC +
Preference number: 3 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGSFFPR*KVERPP
Trigger: GGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGA...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR CCA 72 bp GGGTTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTaGACTGTCAGCTCTGAGGCTGCTAATCCTTTCAGT +
Preference number: 3 (lower is better)
Translates to: GFLQRSWGPASV*TVSSEAANPFS
Trigger: ACTGAAAGGATTAGCAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR GCA 72 bp TGGAAGTGTAGCTTCCCAAAGCTTAGAACCTGGAGATaGCTGGCCATGCTCCCAGTCAATGAGGTCACCAAG +
Preference number: 3 (lower is better)
Translates to: WKCSFPKLRTWR*LAMLPVNEVTK
Trigger: CTTGGTGACCTCATTGACTGGGAGCATGGCCAGGCATCTCCAGGTTCTAAGCTTTGGGAAGCTACACTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR CCA 72 bp AGTGTAGCTTCCCAAAGCTTAGAACCTGGAGATGCCTaGCCATGCTCCCAGTCAATGAGGTCACCAAGGAGA +
Preference number: 3 (lower is better)
Translates to: SVASQSLEPGDA*PCSQSMRSPRR
Trigger: TCTCCTTGGTGACCTCATTGACTGGGAGCATGGCCAGGCATCTCCAGGTTCTAAGCTTTGGGAAGCTACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR CCA 72 bp GCAACTTGGAAGTGTAGCTTCCCAAAGCTTAGAACCTaGAGATGCCTGGCCATGCTCCCAGTCAATGAGGTC +
Preference number: 3 (lower is better)
Translates to: ATWKCSFPKLRT*RCLAMLPVNEV
Trigger: GACCTCATTGACTGGGAGCATGGCCAGGCATCTCCAGGTTCTAAGCTTTGGGAAGCTACACTTCCAAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR GCA 72 bp ACTGTGAAACACCAAGACGAGACACTGAACATACTCTaGAGGGTGTCCCTAAGGTCCAGTTTCCTGTCCACT +
Preference number: 3 (lower is better)
Translates to: TVKHQDETLNIL*RVSLRSSFLST
Trigger: AGTGGACAGGAAACTGGACCTTAGGGACACCCTGCAGAGTATGTTCAGTGTCTCGTCTTGGTGTTTCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR TCA 72 bp AGTTGTGGGGATGAGAGTGAGTCTCCAACTACAGTTTaGAAGCAGAACCCTTACAGGTCCTCTTCTCCATCC +
Preference number: 3 (lower is better)
Translates to: SCGDESESPTTV*KQNPYRSSSPS
Trigger: GGATGGAGAAGAGGACCTGTAAGGGTTCTGCTTTCAAACTGTAGTTGGAGACTCACTCTCATCCCCACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR TCA 72 bp GCCATGCTCCCAGTCAATGAGGTCACCAAGGAGATTTaGGAGGAAAAACGAAGGAGTGGGATATCAGCTATC +
Preference number: 3 (lower is better)
Translates to: AMLPVNEVTKEI*EEKRRSGISAI
Trigger: GATAGCTGATATCCCACTCCTTCGTTTTTCCTCTCAAATCTCCTTGGTGACCTCATTGACTGGGAGCATGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR GCA 72 bp CAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATaGAAGGTAAGGACAAAAGCAAACACTCAGACCTCA +
Preference number: 3 (lower is better)
Translates to: QQTPASLHIRVG*KVRTKANTQTS
Trigger: TGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR CCA 72 bp AGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTaGATGCAAGGTAAGGACAAAAGCAAACACTCAGAC +
Preference number: 3 (lower is better)
Translates to: STADSSIPTYSG*MQGKDKSKHSD
Trigger: GTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR GCA 72 bp ATGCCTTCGAATTCTCTCCTTGCAGGATCTGTTCATTaGACTCAGCTAATGAAAAGCAGCACAGCAGACTCC +
Preference number: 3 (lower is better)
Translates to: MPSNSLLAGSVH*TQLMKSSTADS
Trigger: GGAGTCTGCTGTGCTGCTTTTCATTAGCTGAGTGCAATGAACAGATCCTGCAAGGAGAGAATTCGAAGGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR GCA 72 bp AACATAAGGAGAATACACGACGGCCAGGTTTCCCTCTaGTCTTCCAGTGAGAAGAGCCTACAGTGTTCTAAA +
Preference number: 3 (lower is better)
Translates to: NIRRIHDGQVSL*SSSEKSLQCSK
Trigger: TTTAGAACACTGTAGGCTCTTCTCACTGGAAGAGCAGAGGGAAACCTGGCCGTCGTGTATTCTCCTTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR TCA 72 bp GGCAGTAACACACTAGTAGTTAAACCGGTATTTCCGTaGTGTGCACCTGCATGGTTAGTGGGAAATGAACTG +
Preference number: 3 (lower is better)
Translates to: GSNTLVVKPVFP*CAPAWLVGNEL
Trigger: CAGTTCATTTCCCACTAACCATGCAGGTGCACATCACGGAAATACCGGTTTAACTACTAGTGTGTTACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR TCA 72 bp TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTaGAAGTGGAGAGACCTCCCACCCCAGCTCCAACAA +
Preference number: 3 (lower is better)
Translates to: SFFLSFFLSFHD*KWRDLPPQLQQ
Trigger: TTGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR TCA 72 bp AGCCCTTCTGGCTATCACATGCTTCTACTGTCCATTTaGCTCTTCAGAATAATCCTCTTTACCAGCTGTGTA +
Preference number: 3 (lower is better)
Translates to: SPSGYHMLLLSI*LFRIILFTSCV
Trigger: TACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGCATGTGATAGCCAGAAGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR-3UTR CAA 90 bp ACATTTCATCGTTTTCAACCACAGGTTCAAAGTAGTTTCTCTACAGTCCAGTATAAGTGTGGACACATTTaGAATCAGACAGACAAAGCA +
Preference number: 3 (lower is better)
Translates to: TFHRFQPQVQSSFSTVQYKCGHI*NQTDKA
Trigger: TGCTTTGTCTGTCTGATTCAAAATGTGTCCACACTT...ATACTGGACTGTAGAGAAACTACTTTGAACCTGTGGTTGAAAACGATGAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
3UTR TCA 72 bp AGAAACTTCAAGTCCCCTTTCTTGGTCTTCACAGATTaGTTATTCTTTCTCTCTTTCTTTCTCTCTCTCTCT +
Preference number: 3 (lower is better)
Translates to: RNFKSPFLVFTD*LFFLSFFLSLS
Trigger: AGAGAGAGAGAGAAAGAAAGAGAGAAAGAATAATCAATCTGTGAAGACCAAGAAAGGGGACTTGAAGTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGCCGGGTGAGGGGAGCTaGCCCATCCACAGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: FCKGAGAQLACGLSALRLPGEGS*PIHSLA
Trigger: GGCAAGACTGTGGATGGGCCAGCTCCCCTCACCCGG...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGCAGCAGCAGGCCAGCTaGGCACCCGGTGCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: FCKGAGAQLACGLSALRLQQQAS*APGAVL
Trigger: AAGAACTGCACCGGGTGCTCAGCTGGCCTGCTGCTG...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTCCGTTCTCAAAGGCTTaGCGGGTGAGGGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAPFSKA*RVRGAG
Trigger: GCCAGCTCCCCTCACCCGGCAAGCCTTTGAGAACGG...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTCACGGCTGGCACCTGTaGGAGCCCTCATCCCAGTAC +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAHGWHL*EPSSQY
Trigger: GTACTGGGATGAGGGCTCCCACAGGTGCCAGCCGTG...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp TTTGTTTTTGCGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGACGGTGGAAATACAAAGGCTTGCCGGGTaGGGGGAGCTGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: FVFAGVVVVVVVVVTVEIQRLAG*GELAHP
Trigger: TGGATGGGCCAGCTCCCCTCACCCGGCAAGCCTTTG...TATTTCCACCGTCACCACCACCACCACCACCACCACCACCCCCGCAAAAACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCTCTCTGGACAGTGCTTaGAGACTCCTTCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGSLDSA*RLLPRP
Trigger: TGGCCGTGGAAGGAGTCTGCAAGCACTGTCCAGAGA...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TTTGTTTTTGCGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGACGGTGGAAATACCGGGTGAGGGGAGCTaGCCCATCCACAGTCTTGCC +
Preference number: 4 (lower is better)
Translates to: FVFAGVVVVVVVVVTVEIPGEGS*PIHSLA
Trigger: GGCAAGACTGTGGATGGGCCAGCTCCCCTCACCCGG...TATTTCCACCGTCACCACCACCACCACCACCACCACCACCCCCGCAAAAACAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGGGCCAGGAGGGCAGCTaGAGACACAGATTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: FCKGAGAQLACGLSALRLGQEGS*RHRFWC
Trigger: ACACCAGAATCTGTGTCTCCAGCTGCCCTCCTGGCC...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCAGAGTGTTGTCCGGCTaGCTCAGGCACTGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGRVLSG*LRHCWQ
Trigger: TTGCCAACAGTGCCTGAGCCAGCCGGACAACACTCT...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTAAGACTGGCAGTCTGTaGGCCGTGGACCTCGGCATG +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAKTGSL*AVDLGM
Trigger: CATGCCGAGGTCCACGGCCCACAGACTGCCAGTCTT...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGTTGTTTGCAGTGGCTaGCACTTCTCCGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAVVCSG*HFSGTA
Trigger: CGCTGTGCCGGAGAAGTGGCAGCCACTGCAAACAAC...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCAGTGTAAGCAGTCACTaGAGTGATCTGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGSVSSH*SDLVLA
Trigger: GGCCAGGACCAGATCACTGCAGTGACTGCTTACACT...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGCGGTGCAGTTCTTGCTaGCTGGACCCTTGCATTCCA +
Preference number: 4 (lower is better)
Translates to: FCKGAGAQLACGLSALRLRCSSC*LDPCIP
Trigger: TGGAATGCAAGGGTCCAGGCAGCAAGAACTGCACCG...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCCATTCTCCCAACTCTTaGTCTCCATGGAAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGHSPNS*SPWKPG
Trigger: CCCTGGCTTCCATGGAGACCAAGAGTTGGGAGAATG...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTCCAGGGCCACAATCCTaGACACAGCTGCCACCGGAG +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRPGPQS*TQLPPE
Trigger: CTCCGGTGGCAGCTGTGTGCAGGATTGTGGCCCTGG...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTCCTTTGCCACAGGTCTaGTTCGAGACTTCCGCCACA +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAPLPQV*FETSAT
Trigger: TGTGGCGGAAGTCTCGAAGCAGACCTGTGGCAAAGG...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTCAGAGCACACACTGCTaGCTGTCCTTGTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAQSTHC*LSLSVW
Trigger: CCACACTGACAAGGACAGCCAGCAGTGTGTGCTCTG...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTTTGTCACAAGTGGGGTaGCACCTCTCACAGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEALSQVG*HLSQVW
Trigger: CCAGACCTGTGAGAGGTGCCACCCCACTTGTGACAA...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACACAAAGGCTTGCCGGGTaGGGGGAGCTGGCCCATCCA +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTQRLAG*GELAHP
Trigger: TGGATGGGCCAGCTCCCCTCACCCGGCAAGCCTTTG...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGCTAGGGCCAGGGCAATaGTTCCAGCAGCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARLGPGQ*FQQPWG
Trigger: CCCCCATGGCTGCTGGAATCATTGCCCTGGCCCTAG...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTATTATCCGAGCAGCCTaGGGCTTTGTAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAIIRAA*GFVDGA
Trigger: CGCTCCATCTACAAAGCCTCAGGCTGCTCGGATAAT...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTCACTGCCCAGTGGTTaGTGTAGACGCGCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARSLPSG*CRRASG
Trigger: GCCGGACGCGCGTCTACACCAACCACTGGGCAGTGA...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCTTCACCACTTGCTGTTaGATCCACTCCACCTTTGGT +
Preference number: 4 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGFTTCC*IHSTFG
Trigger: ACCAAAGGTGGAGTGGATCCAACAGCAAGTGGTGAA...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGGGTGGCACTGTCCCTTaGAGCGTAGGAGAAAGAAAA +
Preference number: 4 (lower is better)
Translates to: FCKGAGAQLACGLSALRLGGTVP*SVGERK
Trigger: TTTTCTTTCTCCTACGCTCCAAGGGACAGTGCCACC...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTGGGGGACCCAGATCAGGGCTGGCAGTCGTaGCCATTGAAGAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: REVVQSLSLSLWALGDPDQGWQS*PLKNCP
Trigger: TGGACAGTTCTTCAATGGTCACGACTGCCAGCCCTG...ATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTTCGTGGATGCAGTCCTaGCACCTCTCTGGACAGTGC +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRSWMQS*HLSGQC
Trigger: GCACTGTCCAGAGAGGTGCCAGGACTGCATCCACGA...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCCAGTCGCAGCAGTCCTaGGATCTGCGGGAGTGGGAG +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSQSQQS*DLREWE
Trigger: CTCCCACTCCCGCAGATCCCAGGACTGCTGCGACTG...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGAAGCAGTCACTGCAGTaGTCTGGTCCTGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKKQSLQ*SGPGPS
Trigger: TGACGGGCCAGGACCAGATCACTGCAGTGACTGCTT...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp ATGGGGGCTTTAGCATCCACACCCCAGCTCCTTTCCAAGACCATCACTCACTCTACCTTCCCTCTTCCATaGCATACCCCTCGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: MGALASTPQLLSKTITHSTFPLP*HTPRCS
Trigger: ACTGCACCGAGGGGTATGTCATGGAAGAGGGAAGGT...AGAGTGAGTGATGGTCTTGGAAAGGAGCTGGGGTGTGGATGCTAAAGCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACATCCTTGCCTTCCACCTaGGGCCAGGTGGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTSLPST*GQVDQR
Trigger: TCTCTGGTCCACCTGGCCTCAGGTGGAAGGCAAGGA...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCCGGGAGCATTTCTTGTaGCACGGCTGGCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSREHFL*HGWHLW
Trigger: CCACAGGTGCCAGCCGTGTCACAAGAAATGCTCCCG...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCTTGTCTGTGCATCGCTaGCTTAGATCAGTAGTGATT +
Preference number: 4 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGLSVHR*LRSVVI
Trigger: AATCACTACTGATCTAAGGCAGCGATGCACAGACAA...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGATCCAATGCATGCCTTaGAGTTCTCACTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: FCKGAGAQLACGLSALRLIQCMP*SSHCIS
Trigger: GGAAATGCAGTGAGAACTGCAAGGCATGCATTGGAT...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCTGTTATCACATCTCTTaGAGGATTTGTAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGCYHIS*RICSHP
Trigger: AGGGTGGCTACAAATCCTGCAAGAGATGTGATAACA...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCCTTCCTCACAGGGCATaGATTCTTCATACTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGLPHRA*ILHTQN
Trigger: ATTCTGAGTATGAAGAATGCATGCCCTGTGAGGAAG...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTTGTAGCCCGAGCCAGTaGAATTCTCACAGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRCSPSQ*NSHRLG
Trigger: ACCGAGCCTGTGAGAATTGCACTGGCTCGGGCTACA...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp ATGGGGGCTTTAGCATCCACACCCCAGCTCCTTTCCAAGACCATCACTCACTCTGAGAGTTGTTTGCAGTaGCTGCCACTTCTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: MGALASTPQLLSKTITHSESCLQ*LPLLRH
Trigger: GTGCCGGAGAAGTGGCAGCCACTGCAAACAACTCTC...AGAGTGAGTGATGGTCTTGGAAAGGAGCTGGGGTGTGGATGCTAAAGCCCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp CGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTGGGGGACCCAGATAGGTCAGAAACGGATTaGCTTCTAGGGCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: REVVQSLSLSLWALGDPDRSETD*LLGPGQ
Trigger: TTGCCCTGGCCCTAGAAGCCAATCCGTTTCTGACCT...ATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp TTTGTTTTTGCGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGACGGTGGAAATACCAAGAGCTGGGATCTaGTTCCTGAGGGTGATGTCA +
Preference number: 4 (lower is better)
Translates to: FVFAGVVVVVVVVVTVEIPRAGI*FLRVMS
Trigger: TGACATCACCCTCAGGAACCAGATCCCAGCTCTTGG...TATTTCCACCGTCACCACCACCACCACCACCACCACCACCCCCGCAAAAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp CGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTGGGGGACCCAGATGATCAAAGAGCCTGTTaGCCAAGAGCTGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: REVVQSLSLSLWALGDPDDQRAC*PRAGIW
Trigger: CCAGATCCCAGCTCTTGGCCAACAGGCTCTTTGATC...ATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGGTCACTGCAGTGATCTaGTCCTGGCCCGTCACATCC +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARVTAVI*SWPVTS
Trigger: GGATGTGACGGGCCAGGACCAGATCACTGCAGTGAC...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTTACAGGAGGTGCAGTTaGAAGGGCCACTACCTTGGC +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRYRRCS*KGHYLG
Trigger: GCCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTA...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGGTCCTGGCACCTCTCTaGACAGTGCTTGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARVLAPL*TVLADS
Trigger: GGAGTCTGCAAGCACTGTCCAGAGAGGTGCCAGGAC...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGCCCTACGATACATTCTaGGATGCAGATTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: FCKGAGAQLACGLSALRLPYDTF*DADSFQ
Trigger: CTGAAAGGAATCTGCATCCCAGAATGTATCGTAGGG...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTGGGGGACCCAGATGCCACTTGGGATCATTaGAGTAGGTTGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: REVVQSLSLSLWALGDPDATWDH*SRLTGH
Trigger: ATGCCCAGTCAACCTACTTCAATGATCCCAAGTGGC...ATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCGCCGGCGATCTTCACTaGCCAGTGGTTGGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LSFFLSTIESGETSHPSSAGDLH*PVVGVD
Trigger: GTCTACACCAACCACTGGGCAGTGAAGATCGCCGGC...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp ATGGGGGCTTTAGCATCCACACCCCAGCTCCTTTCCAAGACCATCACTCACTCTGCACAGCGGGTCCCATaGTTGTTCTCATTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: MGALASTPQLLSKTITHSAQRVP*LFSLLA
Trigger: TGCAAGCAATGAGAACAAGCATGGGACCCGCTGTGC...AGAGTGAGTGATGGTCTTGGAAAGGAGCTGGGGTGTGGATGCTAAAGCCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp TTTGTTTTTGCGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGACGGTGGAAATAGTAGCTGACAGACTTTaGCTCCACCATGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: FVFAGVVVVVVVVVTVEIVADRL*LHHVSD
Trigger: GTCACTGACATGGTGGAGGCAAAGTCTGTCAGCTAC...TATTTCCACCGTCACCACCACCACCACCACCACCACCACCCCCGCAAAAACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp CTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGCTCTCTGTTCACTCCGATCCGTTCTCAAAGGCTTaGCGGGTGAGGGGAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LQRKARKMIEAKLSVHSDPFSKA*RVRGAG
Trigger: GCCAGCTCCCCTCACCCGGCAAGCCTTTGAGAACGG...ATCGGAGTGAACAGAGAGCTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTTGCTCCGTCCACCATTaGCAGATGCCCACACAAACA +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRCSVHH*QMPTQT
Trigger: TGTTTGTGTGGGCATCTGGCAATGGTGGACGGAGCA...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTCACATCCAACCTCACTaGATTCAGGGTCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRHIQPH*IQGHRD
Trigger: GTCCCTGTGACCCTGAATGCAGTGAGGTTGGATGTG...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTTGTTTTTGCGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGACGGTGGAAATAACTGATTACCATGGCTaGCAAAGCAGGACTCGCAGT +
Preference number: 4 (lower is better)
Translates to: FVFAGVVVVVVVVVTVEITDYHG*QSRTRS
Trigger: ACTGCGAGTCCTGCTTTGGCAGCCATGGTAATCAGT...TATTTCCACCGTCACCACCACCACCACCACCACCACCACCCCCGCAAAAACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCAGGAGAGGCACTGCATaGTGTGTGGTCCTTCGCAGG +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSRRGTA*CVVLRR
Trigger: CCTGCGAAGGACCACACAGCATGCAGTGCCTCTCCT...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGTGCTGCCTGGACCCTTaGATTCCATGCAGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKCCLDP*IPCSSR
Trigger: ACGAGAGCTGCATGGAATGCAAGGGTCCAGGCAGCA...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTGGGGGACCCAGATGTTTTGCATCAGATCTaGGTGGGTTCTCTCGATGCC +
Preference number: 4 (lower is better)
Translates to: REVVQSLSLSLWALGDPDVLHQI*VGSLDA
Trigger: GGCATCGAGAGAACCCACCCAGATCTGATGCAAAAC...ATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp TCCTGTCCACTTCCCTGGCTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGGGCCAGGAGGGCAGCTaGAGACACAGATTCTGGTGT +
Preference number: 4 (lower is better)
Translates to: SCPLPWLQRKARKMIEAKGQEGS*RHRFWC
Trigger: ACACCAGAATCTGTGTCTCCAGCTGCCCTCCTGGCC...CTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAGCCAGGGAAGTGGACAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGACAGTTCTTGAATCCTaGCCCATTGCATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: FCKGAGAQLACGLSALRLTVLES*PIACQT
Trigger: TGTTTGACATGCAATGGGCCAGGATTCAAGAACTGT...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR CAA 72 bp AGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATaGGTAGCTCCCAGCAGGATTGAGAGCCAGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RTKANTQTSANA*VAPSRIESQEG
Trigger: CCCTTCCTGGCTCTCAATCCTGCTGGGAGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGCCATCACAAGAACAGTaGTCCTTGCTCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKPSQEQ*SLLRPP
Trigger: TGGTGGACGGAGCAAGGATCACTGTTCTTGTGATGG...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCACCTTCCCTCTTCCATaGCATACCCCTCGGTGCAGT +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSTFPLP*HTPRCS
Trigger: ACTGCACCGAGGGGTATGTCATGGAAGAGGGAAGGT...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTAGCTGGAACAGTTCTTaGATCCTGGCCCATTGCATG +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRSWNSS*ILAHCM
Trigger: CATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCT...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACACCAGCAGCCCATACTTaGACTTCCGGTAGACAGTGC +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTPAAHT*TSGRQC
Trigger: GCACTGTCTACCGGAAGTTCAAGTATGGGCTGCTGG...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGGCACAGCGGGTCCCATaGTTGTTCTCATTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARAQRVP*LFSLLA
Trigger: TGCAAGCAATGAGAACAAGCATGGGACCCGCTGTGC...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACACTGCTCTACAGGAGGTaGAGTTGGAAGGGCCACTAC +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTLLYRR*SWKGHY
Trigger: GTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCAG...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCCACCTCTCTGGACAGTaGTTGCAGACTCCTTCCACG +
Preference number: 4 (lower is better)
Translates to: LSFFLSTIESGETSHPSSHLSGQ*LQTPST
Trigger: CGTGGAAGGAGTCTGCAAGCACTGTCCAGAGAGGTG...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TCCTGTCCACTTCCCTGGCTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGACAGAAGCCTCCTTCTaGCCAGGACTCTTCCGTAGC +
Preference number: 4 (lower is better)
Translates to: SCPLPWLQRKARKMIEAKTEASF*PGLFRS
Trigger: GCTACGGAAGAGTCCTGGGCAGAAGGAGGCTTCTGT...CTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAGCCAGGGAAGTGGACAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTATATTCATGTCTGACTaGCAAGGATGGGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAIFMSD*QGWVLS
Trigger: TGACAACACCCATCCTTGCCAGTCAGACATGAATAT...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCGAGAGTTGTTTGCAGTaGCTGCCACTTCTCCGGCAC +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSESCLQ*LPLLRH
Trigger: GTGCCGGAGAAGTGGCAGCCACTGCAAACAACTCTC...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGCTCCATCCTTGCAGATaGCTCCCATCTGACACGTTC +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKLHPCR*LPSDTF
Trigger: GAACGTGTCAGATGGGAGCCATCTGCAAGGATGGAG...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTTGCATAAAAGCCCTCTaGGCAACTGTGGTAGCACCT +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRCIKAL*ATVVAP
Trigger: AGGTGCTACCACAGTTGCCCAGAGGGCTTTTATGCA...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTAAGAGTTACAGCTGGTaGCATTTCCTTCGCATGTTT +
Preference number: 4 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAKSYSW*HFLRMF
Trigger: AAACATGCGAAGGAAATGCCACCAGCTGTAACTCTT...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp TTTGTTTTTGCGGGGGTGGTGGTGGTGGTGGTGGTGGTGGTGACGGTGGAAATACACCTTTGGTTCCATTaGAATGAAACTGTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: FVFAGVVVVVVVVVTVEIHLWFH*NETVGS
Trigger: GGAACCCACAGTTTCATTTCAATGGAACCAAAGGTG...TATTTCCACCGTCACCACCACCACCACCACCACCACCACCCCCGCAAAAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGGCCACTTGGGATCATTaGAGTAGGTTGACTGGGCAT +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARATWDH*SRLTGH
Trigger: ATGCCCAGTCAACCTACTTCAATGATCCCAAGTGGC...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTGGGGGACCCAGATATTTACCTGGAGTCTTaGAGTTCCTCAGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: REVVQSLSLSLWALGDPDIYLES*SSSAEM
Trigger: CATCTCAGCTGAGGAACTTCAAGACTCCAGGTAAAT...ATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTTGTTACGGGGCAGCTaGTACAGTCTTCCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARLLRGS*YSLPEL
Trigger: CAACTCAGGAAGACTGTATCAGCTGCCCCGTAACAA...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCGCAGTGAGAGTTGTTTaGAGTGGCTGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSFFLSTIESGETSHPSSAVRVV*SGCHFS
Trigger: GGAGAAGTGGCAGCCACTGCAAACAACTCTCACTGC...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACAATAACATGCTaGACGTCTCTCCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRLTITC*TSLQVR
Trigger: TCTGACCTGGAGAGACGTGCAGCATGTTATTGTCAG...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGACTGATTACCATGGCTaGCAAAGCAGGACTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKTDYHG*QSRTRS
Trigger: ACTGCGAGTCCTGCTTTGGCAGCCATGGTAATCAGT...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGGTTAATACATCCATCTaGTCCGGCCCCAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARVNTSI*SGPRAS
Trigger: ACTTGCTCTGGGGCCGGAGCAGATGGATGTATTAAC...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGCTGGATCATCCTCAGTaGATCCCAGACATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARLDHPQ*IPDILP
Trigger: AGGAAGGATGTCTGGGATGCACTGAGGATGATCCAG...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACAAACTGTGGTAGCACCTaGCCTCATGGAGAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTNCGST*PHGEAE
Trigger: CTCTGCTTCTCCATGAGGGCAGGTGCTACCACAGTT...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTCTTCCTTGGGGCCATTaGACTCCAGACAGTTTTTGT +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRLPWGH*TPDSFC
Trigger: ACAAAAACTGTCTGGAGTGCAATGGCCCCAAGGAAG...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCTGCATCAGATCTGGGTaGGTTCTCTCGATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LSFFLSTIESGETSHPSSCIRSG*VLSMPS
Trigger: TGACGGCATCGAGAGAACCCACCCAGATCTGATGCA...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGCTGAGGCTTTGTAGATaGAGCGCACTGCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKLRLCR*SALHCL
Trigger: CAAACAGTGCAGTGCGCTCCATCTACAAAGCCTCAG...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACACCAAGAGCTGGGATCTaGTTCCTGAGGGTGATGTCA +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTPRAGI*FLRVMS
Trigger: TGACATCACCCTCAGGAACCAGATCCCAGCTCTTGG...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACAGATCAAAGAGCCTGTTaGCCAAGAGCTGGGATCTGG +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTDQRAC*PRAGIW
Trigger: CCAGATCCCAGCTCTTGGCCAACAGGCTCTTTGATC...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTGGGGGACCCAGATGTTCCTCAGCTGAGATaGCGTATCATAAACTTCGAG +
Preference number: 4 (lower is better)
Translates to: REVVQSLSLSLWALGDPDVPQLR*RIINFE
Trigger: CTCGAAGTTTATGATACGCCATCTCAGCTGAGGAAC...ATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACAGGAAGCGTTCCACTTTaGGAAACTCGTTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTGSVPL*ETRWLG
Trigger: CCCCAACCAACGAGTTTCCCAAAGTGGAACGCTTCC...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACAACAGTCTTCCTGAGTTaGTCCCCAGCACTTGGCACA +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTTVFLS*SPALGT
Trigger: TGTGCCAAGTGCTGGGGACCAACTCAGGAAGACTGT...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCGCAGTTCTTGCTGCCTaGACCCTTGCATTCCATGCA +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSAVLAA*TLAFHA
Trigger: TGCATGGAATGCAAGGGTCCAGGCAGCAAGAACTGC...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAAACAGCCGGCGAGCAGTaGCAGCACGCACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKTAGEQ*QHAQQV
Trigger: GACCTGCTGTGCGTGCTGGCACTGCTCGCCGGCTGT...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp ATGGGGGCTTTAGCATCCACACCCCAGCTCCTTTCCAAGACCATCACTCACTCTCTTGTTCTCATTGCTTaGATCATAACGAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: MGALASTPQLLSKTITHSLVLIA*IITRHR
Trigger: CCGATGCCTCGTTATGATGCAAGCAATGAGAACAAG...AGAGTGAGTGATGGTCTTGGAAAGGAGCTGGGGTGTGGATGCTAAAGCCCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp AGAAAATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTGTTGTTTGCAGTGGCTaGCACTTCTCCGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: RKYRARRVQSCHPHSISSVVCSG*HFSGTA
Trigger: CGCTGTGCCGGAGAAGTGGCAGCCACTGCAAACAAC...ACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCGTAGATGGAGCGCACTaGACTGTTTGGTCGAATGGT +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSVDGAH*TVWSNG
Trigger: ACCATTCGACCAAACAGTGCAGTGCGCTCCATCTAC...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TCCTGTCCACTTCCCTGGCTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGAGGGTCACAGGGACCTaGATAATCTTCAGCACCGTA +
Preference number: 4 (lower is better)
Translates to: SCPLPWLQRKARKMIEAKRVTGT*IIFSTV
Trigger: TACGGTGCTGAAGATTATGCAGGTCCCTGTGACCCT...CTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAGCCAGGGAAGTGGACAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGTGTATTCTCCATCCTTaGAGATGGCTCCCATCTGAC +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKCILHP*RWLPSD
Trigger: GTCAGATGGGAGCCATCTGCAAGGATGGAGAATACA...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGGACCCTTGCATTCCATaGAGCTCTCGTGGCATTTTT +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARDPCIP*SSRGIF
Trigger: AAAAATGCCACGAGAGCTGCATGGAATGCAAGGGTC...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCGTTTTGCATCAGATCTaGGTGGGTTCTCTCGATGCC +
Preference number: 4 (lower is better)
Translates to: LSFFLSTIESGETSHPSSVLHQI*VGSLDA
Trigger: GGCATCGAGAGAACCCACCCAGATCTGATGCAAAAC...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTGTGATGTCAGATAGATaGCCAGGTCTCCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGVMSDR*PGLPSV
Trigger: CACGGAGGGGAGACCTGGCCATCTATCTGACATCAC...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTCTAAAAGATATCCACTaGGGCAGCTGGAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: KVLETVSFLLALVLPSLRLKDIH*GSWNSS
Trigger: AGAACTGTTCCAGCTGCCCCAGTGGATATCTTTTAG...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTGATGGCCAAGTGCCTTaGGGACAGGAAGGAACACAG +
Preference number: 4 (lower is better)
Translates to: CKVRTKANTQTSANALVADGQVP*GQEGTQ
Trigger: CTGTGTTCCTTCCTGTCCCCAAGGCACTTGGCCATC...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTTCCAGACAGTTTTTGTaGCAGGGGACACACTGGCGC +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGSRQFL*QGTHWR
Trigger: GCGCCAGTGTGTCCCCTGCCACAAAAACTGTCTGGA...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACATACAGTCATCTTCCTTaGGGCCATTGCACTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTYSHLP*GHCTPD
Trigger: GTCTGGAGTGCAATGGCCCCAAGGAAGATGACTGTA...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTTCGATATTCATGTCTaGCTGGCAAGGATGGGTGTT +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARFDIHV*LARMGV
Trigger: AACACCCATCCTTGCCAGTCAGACATGAATATCGAA...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTGTAGCCAGTGTAGATaGACACTCTTCCAAGTACCA +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARCSQCR*TLFQVP
Trigger: TGGTACTTGGAAGAGTGTTCATCTACACTGGCTACA...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTGCTGATGTTCCAGTGTaGTTGTCTGTGCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: CKVRTKANTQTSANALVAADVPV*LSVHRC
Trigger: GCAGCGATGCACAGACAATCACACTGGAACATCAGC...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAACTAGGGCCAGGGCAATaGTTCCAGCAGCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKLGPGQ*FQQPWG
Trigger: CCCCCATGGCTGCTGGAATCATTGCCCTGGCCCTAG...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTACACACACGTGCTGCTaGGGAACAGTTGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGTHTCC*GTVVHF
Trigger: GAAGTGGACAACTGTTCCTCAGCAGCACGTGTGTGT...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGCATGCTCCAGGTAATTaGCGTGATGGTTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARHAPGN*RDGWDY
Trigger: ATAATCCCAACCATCACGTCAATTACCTGGAGCATG...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CCAAAGGGTAAGAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATAAAGCAGTCACTGCAGTaGTCTGGTCCTGGCCCGTCA +
Preference number: 4 (lower is better)
Translates to: PKGKSICHVSKRCAIHYIKQSLQ*SGPGPS
Trigger: TGACGGGCCAGGACCAGATCACTGCAGTGACTGCTT...TATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTCTTACCCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp CTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGCTCTCTGTTCACTCCGATTGCTCCGTCCACCATTaGCAGATGCCCACACAAACA +
Preference number: 4 (lower is better)
Translates to: LQRKARKMIEAKLSVHSDCSVHH*QMPTQT
Trigger: TGTTTGTGTGGGCATCTGGCAATGGTGGACGGAGCA...ATCGGAGTGAACAGAGAGCTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp CTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGCTCTCTGTTCACTCCGATAGTGTAAGCAGTCACTaGAGTGATCTGGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LQRKARKMIEAKLSVHSDSVSSH*SDLVLA
Trigger: GGCCAGGACCAGATCACTGCAGTGACTGCTTACACT...ATCGGAGTGAACAGAGAGCTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTGAAGGAACACAGGCCTaGAGCCACAGGTACATACCT +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGEGTQA*SHRYIP
Trigger: AGGTATGTACCTGTGGCTGCAGGCCTGTGTTCCTTC...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTGCCGTGCAGACATCATaGACTACTGTGAAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGAVQTS*TTVKPS
Trigger: GGAAGGCTTCACAGTAGTGCATGATGTCTGCACGGC...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTTATCCATCCCTGCATTaGAGCAAGCACTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGYPSLH*SKHSLP
Trigger: GGGCAAGGAGTGCTTGCTGCAATGCAGGGATGGATA...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTCAGCTGAGCACCCGGTaGAGTTCTTGCTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPQLSTR*SSCCLD
Trigger: GTCCAGGCAGCAAGAACTGCACCGGGTGCTCAGCTG...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTCCCTGGCTGGAAGGATaGACTCATCTGTGGAACTCT +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGPWLEG*THLWNS
Trigger: AGAGTTCCACAGATGAGTGCATCCTTCCAGCCAGGG...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCACTTCCGGTAGACAGTaGCATCTTGGCCCATATAGA +
Preference number: 4 (lower is better)
Translates to: LSFFLSTIESGETSHPSSTSGRQ*HLGPYR
Trigger: TCTATATGGGCCAAGATGGCACTGTCTACCGGAAGT...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TGGCTATCACATGCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACTCACTGCCCAGTGGTTaGTGTAGACGCGCGTCCGGC +
Preference number: 4 (lower is better)
Translates to: WLSHASTVHLTLQNNPLYSLPSG*CRRASG
Trigger: GCCGGACGCGCGTCTACACCAACCACTGGGCAGTGA...GTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGCATGTGATAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp ATGGGGGCTTTAGCATCCACACCCCAGCTCCTTTCCAAGACCATCACTCACTCTATATTCATGTCTGACTaGCAAGGATGGGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: MGALASTPQLLSKTITHSIFMSD*QGWVLS
Trigger: TGACAACACCCATCCTTGCCAGTCAGACATGAATAT...AGAGTGAGTGATGGTCTTGGAAAGGAGCTGGGGTGTGGATGCTAAAGCCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGGTCAGAAACGGATTaGCTTCTAGGGCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGRSETD*LLGPGQ
Trigger: TTGCCCTGGCCCTAGAAGCCAATCCGTTTCTGACCT...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGTTCCTCAGCTGAGATaGCGTATCATAAACTTCGAG +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKVPQLR*RIINFE
Trigger: CTCGAAGTTTATGATACGCCATCTCAGCTGAGGAAC...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AGAAAATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTCACCGTAGTCATCTGTaGGGTCTTCCACTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: RKYRARRVQSCHPHSISSHRSHL*GLPLGC
Trigger: ACAGCCGAGTGGAAGACCCCACAGATGACTACGGTG...ACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAACTCTTGGTCTCCATaGAAGCCAGGGCCACAATCC +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGNSWSP*KPGPQS
Trigger: GGATTGTGGCCCTGGCTTCCATGGAGACCAAGAGTT...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACATTGGTTCCATTGAAATaGAACTGTGGGTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTLVPLK*NCGFLC
Trigger: GCAGAGGAACCCACAGTTTCATTTCAATGGAACCAA...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTATCATTGAAGTAGGTTaGCTGGGCATGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGIIEVG*LGMAEV
Trigger: GACCTCAGCCATGCCCAGTCAACCTACTTCAATGAT...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTACTCCAATCTTGGCGTTaGAAGCGATCCCGACAGTGC +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLLQSWR*KRSRQC
Trigger: GCACTGTCGGGATCGCTTTCAACGCCAAGATTGGAG...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAACCCTTCCATGGAATaGTCAAAGAGCCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGNPSME*SKSLLA
Trigger: GGCCAACAGGCTCTTTGATCATTCCATGGAAGGGTT...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCATTTACCTGGAGTCTTaGAGTTCCTCAGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: LSFFLSTIESGETSHPSSIYLES*SSSAEM
Trigger: CATCTCAGCTGAGGAACTTCAAGACTCCAGGTAAAT...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCACAGCCGGCGAGCAGTaGCAGCACGCACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETTAGEQ*QHAQQV
Trigger: GACCTGCTGTGCGTGCTGGCACTGCTCGCCGGCTGT...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAAGCGATCCCGACAGTaGAGTGAGAGTTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGKRSRQ*SESCLQ
Trigger: CTGCAAACAACTCTCACTGCACTGTCGGGATCGCTT...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTGTAGCTGACAGACTTTaGCTCCACCATGTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: CKVRTKANTQTSANALVAVADRL*LHHVSD
Trigger: GTCACTGACATGGTGGAGGCAAAGTCTGTCAGCTAC...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGTGGAGATGGTATAGATaGTGTTGGTATAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKWRWYR*CWYSHH
Trigger: GTGATGGCTATACCAACAGCATCTATACCATCTCCA...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp CTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGCTCTCTGTTCACTCCGATGTTAATACATCCATCTaGTCCGGCCCCAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LQRKARKMIEAKLSVHSDVNTSI*SGPRAS
Trigger: ACTTGCTCTGGGGCCGGAGCAGATGGATGTATTAAC...ATCGGAGTGAACAGAGAGCTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGCGCAGAGAGATCCATTaGAGGTTTTACAAGAAGAGT +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARRREIH*RFYKKS
Trigger: ACTCTTCTTGTAAAACCTGCAATGGATCTCTCTGCG...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGTTCCTTCGCATGTTTTaGAAGGGGAACTACAGTGTT +
Preference number: 4 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKFLRMF*KGNYSV
Trigger: AACACTGTAGTTCCCCTTGCAAAACATGCGAAGGAA...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGCATGTACCACATACTTaGCCACTTGGGATCATTGAA +
Preference number: 4 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARHVPHT*PLGIIE
Trigger: TTCAATGATCCCAAGTGGCCAAGTATGTGGTACATG...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AGAAAATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTGCATCAGATCTGGGTaGGTTCTCTCGATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: RKYRARRVQSCHPHSISSCIRSG*VLSMPS
Trigger: TGACGGCATCGAGAGAACCCACCCAGATCTGATGCA...ACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTAGTGATGTCAGATAGATaGCCAGGTCTCCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLVMSDR*PGLPSV
Trigger: CACGGAGGGGAGACCTGGCCATCTATCTGACATCAC...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTACTGTTGGCCAAGAGCTaGGATCTGGTTCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLLLAKS*DLVPEG
Trigger: ACCCTCAGGAACCAGATCCCAGCTCTTGGCCAACAG...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCGTTTGGCAGTGGCCTTaGTCATCAATGTATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSFFLSTIESGETSHPSSVWQWP*SSMYSP
Trigger: TGGAGAATACATTGATGACCAAGGCCACTGCCAAAC...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACAGAAGAAAAGTCTCTCTaGGACAGGTATAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTEEKSL*DRYSTG
Trigger: ACCAGTGCTATACCTGTCCCAGAGAGACTTTTCTTC...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTGTCCTGCAAGAGCTGTaGCAGAGCACACACTGCTGG +
Preference number: 4 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPVLQEL*QSTHCW
Trigger: CCAGCAGTGTGTGCTCTGCCACAGCTCTTGCAGGAC...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CCAAAGGGTAAGAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATACCATCACAAGAACAGTaGTCCTTGCTCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: PKGKSICHVSKRCAIHYIPSQEQ*SLLRPP
Trigger: TGGTGGACGGAGCAAGGATCACTGTTCTTGTGATGG...TATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTCTTACCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTAGCTGATGTTCCAGTGTaGTTGTCTGTGCATCGCTGC +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLADVPV*LSVHRC
Trigger: GCAGCGATGCACAGACAATCACACTGGAACATCAGC...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTAACACACACGTGCTGCTaGGGAACAGTTGTCCACTTC +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLTHTCC*GTVVHF
Trigger: GAAGTGGACAACTGTTCCTCAGCAGCACGTGTGTGT...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTCAGGGCTGGCAGTCGTaGCCATTGAAGAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPQGWQS*PLKNCP
Trigger: TGGACAGTTCTTCAATGGTCACGACTGCCAGCCCTG...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp AGAAAATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTAGCTGGAACAGTTCTTaGATCCTGGCCCATTGCATG +
Preference number: 4 (lower is better)
Translates to: RKYRARRVQSCHPHSISSSWNSS*ILAHCM
Trigger: CATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCT...ACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCTCACACAGGTTGTATTaGGAAGAAAAGTCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSSHRLY*EEKSLW
Trigger: CCAGAGAGACTTTTCTTCTCAATACAACCTGTGTGA...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp ATGGGGGCTTTAGCATCCACACCCCAGCTCCTTTCCAAGACCATCACTCACTCTTGTAGAACTTTTCGCTaGCAGAGATTGTTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: MGALASTPQLLSKTITHSCRTFR*QRLFFF
Trigger: GAAAAAGAACAATCTCTGTCAGCGAAAAGTTCTACA...AGAGTGAGTGATGGTCTTGGAAAGGAGCTGGGGTGTGGATGCTAAAGCCCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAAGCCGGCGATCTTCACTaGCCAGTGGTTGGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKAGDLH*PVVGVD
Trigger: GTCTACACCAACCACTGGGCAGTGAAGATCGCCGGC...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCATTCACATCGCAACTTaGCAGAGCATCGTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSIHIAT*QSIVVL
Trigger: CAAAACTACGATGCTCTGGCAAGTTGCGATGTGAAT...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp CCAAAGGGTAAGAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATAGCAGTGAGAGTTGTTTaGAGTGGCTGCCACTTCTCC +
Preference number: 4 (lower is better)
Translates to: PKGKSICHVSKRCAIHYIAVRVV*SGCHFS
Trigger: GGAGAAGTGGCAGCCACTGCAAACAACTCTCACTGC...TATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTCTTACCCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp CTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGCTCTCTGTTCACTCCGATCTGACAATAACATGCTaGACGTCTCTCCAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LQRKARKMIEAKLSVHSDLTITC*TSLQVR
Trigger: TCTGACCTGGAGAGACGTGCAGCATGTTATTGTCAG...ATCGGAGTGAACAGAGAGCTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCCCTTGCAGTTCTCACTaGATTTCCCACAGACATTTT +
Preference number: 4 (lower is better)
Translates to: LSFFLSTIESGETSHPSSPCSSH*ISHRHF
Trigger: AAAATGTCTGTGGGAAATGCAGTGAGAACTGCAAGG...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp CTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACAACTCGGGGCAATCTCTaGATTCATCATTCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LSFFPRLKVERPPTPAPTTRGNL*IHHSLL
Trigger: AAGAAGAGAATGATGAATGCAGAGATTGCCCCGAGT...TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTATCTGACTGGCAAGGATaGGTGTTGTCACTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLSDWQG*VLSLQC
Trigger: GCACTGCAGTGACAACACCCATCCTTGCCAGTCAGA...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp CCAAAGGGTAAGAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATACATCTGGTCCCCAGCTaGCACTGTAGATGTGCACAT +
Preference number: 4 (lower is better)
Translates to: PKGKSICHVSKRCAIHYIHLVPS*HCRCAH
Trigger: ATGTGCACATCTACAGTGCCAGCTGGGGACCAGATG...TATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTCTTACCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp CCAAAGGGTAAGAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATAGGAAGCGTTCCACTTTaGGAAACTCGTTGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: PKGKSICHVSKRCAIHYIGSVPL*ETRWLG
Trigger: CCCCAACCAACGAGTTTCCCAAAGTGGAACGCTTCC...TATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTCTTACCCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTCACCGTAGTCATCTGTaGGGTCTTCCACTCGGCTGT +
Preference number: 4 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPHRSHL*GLPLGC
Trigger: ACAGCCGAGTGGAAGACCCCACAGATGACTACGGTG...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp CTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGCTCTCTGTTCACTCCGATTTGGTTCCATTGAAATaGAACTGTGGGTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LQRKARKMIEAKLSVHSDLVPLK*NCGFLC
Trigger: GCAGAGGAACCCACAGTTTCATTTCAATGGAACCAA...ATCGGAGTGAACAGAGAGCTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp CCAAAGGGTAAGAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATAAACCCTTCCATGGAATaGTCAAAGAGCCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: PKGKSICHVSKRCAIHYINPSME*SKSLLA
Trigger: GGCCAACAGGCTCTTTGATCATTCCATGGAAGGGTT...TATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTCTTACCCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTCTTGTTCTCATTGCTTaGATCATAACGAGGCATCGG +
Preference number: 4 (lower is better)
Translates to: CKVRTKANTQTSANALVALVLIA*IITRHR
Trigger: CCGATGCCTCGTTATGATGCAAGCAATGAGAACAAG...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTAGTAGATGGAGCGCACTaGACTGTTTGGTCGAATGGT +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLVDGAH*TVWSNG
Trigger: ACCATTCGACCAAACAGTGCAGTGCGCTCCATCTAC...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTCATAATATCCATCCCTaGATTGCAGCAAGCACTCCT +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGHNIHP*IAASTP
Trigger: AGGAGTGCTTGCTGCAATGCAGGGATGGATATTATG...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTCATCTGGTCCCCAGCTaGCACTGTAGATGTGCACAT +
Preference number: 4 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPHLVPS*HCRCAH
Trigger: ATGTGCACATCTACAGTGCCAGCTGGGGACCAGATG...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTCTGCTTCCATCACCATaGCTTCGGCATCCATCAGTC +
Preference number: 4 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPLLPSP*LRHPSV
Trigger: GACTGATGGATGCCGAAGCCATGGTGATGGAAGCAG...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp ACATTTCATCGTTTTCAACCACAGGTTCAAAGTAGTTTCTCTACAGTCCAGTATGTCACTGCAGTGATCTaGTCCTGGCCCGTCACATCC +
Preference number: 4 (lower is better)
Translates to: TFHRFQPQVQSSFSTVQYVTAVI*SWPVTS
Trigger: GGATGTGACGGGCCAGGACCAGATCACTGCAGTGAC...ATACTGGACTGTAGAGAAACTACTTTGAACCTGTGGTTGAAAACGATGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAAATTATCCGAGCAGCCTaGGGCTTTGTAGATGGAGCG +
Preference number: 4 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKIIRAA*GFVDGA
Trigger: CGCTCCATCTACAAAGCCTCAGGCTGCTCGGATAAT...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACACGTACTTGCTGGCTATaGGATCTGCCTCCGCGAAGC +
Preference number: 4 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTRTCWL*DLPPRS
Trigger: GCTTCGCGGAGGCAGATCGCATAGCCAGCAAGTACG...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TGGCTATCACATGCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCACATCCAACCTCACTaGATTCAGGGTCACAGGGAC +
Preference number: 4 (lower is better)
Translates to: WLSHASTVHLTLQNNPLYHIQPH*IQGHRD
Trigger: GTCCCTGTGACCCTGAATGCAGTGAGGTTGGATGTG...GTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGCATGTGATAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACAGTCCTTCGCAGGTCCTaGAAGAGCTGTGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTVLRRS*KSCGRA
Trigger: TGCTCTGCCACAGCTCTTGCAGGACCTGCGAAGGAC...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp TGGCTATCACATGCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCTGCTTCCATCACCATaGCTTCGGCATCCATCAGTC +
Preference number: 4 (lower is better)
Translates to: WLSHASTVHLTLQNNPLYLLPSP*LRHPSV
Trigger: GACTGATGGATGCCGAAGCCATGGTGATGGAAGCAG...GTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGCATGTGATAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCTGGAGACACAGATTCTaGTGTTATTTTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSWRHRF*CYFSAC
Trigger: ACAAGCTGAAAAATAACACCAGAATCTGTGTCTCCA...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGATCATTGAAGTAGGTTaGCTGGGCATGGCTGAGGTC +
Preference number: 4 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMIIEVG*LGMAEV
Trigger: GACCTCAGCCATGCCCAGTCAACCTACTTCAATGAT...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp CCAAAGGGTAAGAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATTCGATATTCATGTCTaGCTGGCAAGGATGGGTGTT +
Preference number: 4 (lower is better)
Translates to: PKGKSICHVSKRCAIHYIFDIHV*LARMGV
Trigger: AACACCCATCCTTGCCAGTCAGACATGAATATCGAA...TATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTCTTACCCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCCTCCAATCTTGGCGTTaGAAGCGATCCCGACAGTGC +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETLQSWR*KRSRQC
Trigger: GCACTGTCGGGATCGCTTTCAACGCCAAGATTGGAG...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TGGCTATCACATGCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACAAGCGATCCCGACAGTaGAGTGAGAGTTGTTTGCAG +
Preference number: 4 (lower is better)
Translates to: WLSHASTVHLTLQNNPLYKRSRQ*SESCLQ
Trigger: CTGCAAACAACTCTCACTGCACTGTCGGGATCGCTT...GTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGCATGTGATAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp AGAAAATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTGTTATCACATCTCTTaGAGGATTTGTAGCCACCCT +
Preference number: 4 (lower is better)
Translates to: RKYRARRVQSCHPHSISSCYHIS*RICSHP
Trigger: AGGGTGGCTACAAATCCTGCAAGAGATGTGATAACA...ACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACACTCGGTGGCAGGGCTTaGATTCTCCCAACTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTLGGRA*ILPTLG
Trigger: ACCAAGAGTTGGGAGAATGCAAGCCCTGCCACCGAG...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTGAAAGAAGTCAGGCATaGACTCTTTGCAAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGERSQA*TLCKFS
Trigger: AGAAAACTTGCAAAGAGTGCATGCCTGACTTCTTTC...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTTCGTACCGCCCCTTTaGCACAGGTCTGCTTCGAGA +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETFVPPL*HRSASR
Trigger: TCTCGAAGCAGACCTGTGGCAAAGGGGCGGTACGAA...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGCTGAGGCTTTGTAGATaGAGCGCACTGCACTGTTTG +
Preference number: 4 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMLRLCR*SALHCL
Trigger: CAAACAGTGCAGTGCGCTCCATCTACAAAGCCTCAG...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCCTGTTGGCCAAGAGCTaGGATCTGGTTCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETLLAKS*DLVPEG
Trigger: ACCCTCAGGAACCAGATCCCAGCTCTTGGCCAACAG...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTACTAAAAGATATCCACTaGGGCAGCTGGAACAGTTCT +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLLKDIH*GSWNSS
Trigger: AGAACTGTTCCAGCTGCCCCAGTGGATATCTTTTAG...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACACTCAGCCTCCCTGGCTaGAAGGATGCACTCATCTGT +
Preference number: 4 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTLSLPG*KDALIC
Trigger: ACAGATGAGTGCATCCTTCCAGCCAGGGAGGCTGAG...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
3UTR CAA 72 bp TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATaGAAAGTGGAGAGACCTCCCACCCCAGCTCCAACA +
Preference number: 4 (lower is better)
Translates to: FFLSFFLSFFPR*KVERPPTPAPT
Trigger: TGTTGGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACATTGACTGGGCATGGCTaGGGTCATAATCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTLTGHG*GHNPSW
Trigger: CCAAGAGGGATTATGACCTCAGCCATGCCCAGTCAA...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp TGGCTATCACATGCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGATGGCTCCCATCTaGCACGTTCCTAAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: WLSHASTVHLTLQNNPLYQMAPI*HVPKSK
Trigger: TTTAGACTTAGGAACGTGTCAGATGGGAGCCATCTG...GTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGCATGTGATAGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTACAGGAAGCGCTCCTaGCCATGCTTGTCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETYRKRS*PCLSAL
Trigger: TAGAGCAGACAAGCATGGTCAGGAGCGCTTCCTGTA...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTAATTCACATCGCAACTTaGCAGAGCATCGTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLIHIAT*QSIVVL
Trigger: CAAAACTACGATGCTCTGGCAAGTTGCGATGTGAAT...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCACCCTTCTTGACAGCTaGTGCATTGGTTGTAGCCCG +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETTLLDS*CIGCSP
Trigger: CGGGCTACAACCAATGCAGCAGCTGTCAAGAAGGGT...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTCACACCTACCGCTGGTaGTTTCTCCATAATATCCAT +
Preference number: 4 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPHTYRW*FLHNIH
Trigger: ATGGATATTATGGAGAAAGCACCAGCGGTAGGTGTG...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGTTCACCACTTGCTGTTaGATCCACTCCACCTTTGGT +
Preference number: 4 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMFTTCC*IHSTFG
Trigger: ACCAAAGGTGGAGTGGATCCAACAGCAAGTGGTGAA...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACATCTGACTGGCAAGGATaGGTGTTGTCACTGCAGTGC +
Preference number: 4 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTSDWQG*VLSLQC
Trigger: GCACTGCAGTGACAACACCCATCCTTGCCAGTCAGA...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CCA 90 bp CCAAAGGGTAAGAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATAACAGTTCTTGAATCCTaGCCCATTGCATGTCAAACA +
Preference number: 4 (lower is better)
Translates to: PKGKSICHVSKRCAIHYITVLES*PIACQT
Trigger: TGTTTGACATGCAATGGGCCAGGATTCAAGAACTGT...TATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTCTTACCCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCAATGTATCGCAAGACTaGCAGTCTGTGGGCCGTGGA +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETNVSQD*QSVGRG
Trigger: TCCACGGCCCACAGACTGCCAGTCTTGCGATACATT...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGTGTAGCCAGTGTAGATaGACACTCTTCCAAGTACCA +
Preference number: 4 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMCSQCR*TLFQVP
Trigger: TGGTACTTGGAAGAGTGTTCATCTACACTGGCTACA...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp TGGCTATCACATGCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCATGCTCCAGGTAATTaGCGTGATGGTTGGGATTAT +
Preference number: 4 (lower is better)
Translates to: WLSHASTVHLTLQNNPLYHAPGN*RDGWDY
Trigger: ATAATCCCAACCATCACGTCAATTACCTGGAGCATG...GTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGCATGTGATAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCAGGGTCACAGGGACCTaGATAATCTTCAGCACCGTA +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETRVTGT*IIFSTV
Trigger: TACGGTGCTGAAGATTATGCAGGTCCCTGTGACCCT...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGATCCAATGCATGCCTTaGAGTTCTCACTGCATTTCC +
Preference number: 4 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMIQCMP*SSHCIS
Trigger: GGAAATGCAGTGAGAACTGCAAGGCATGCATTGGAT...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACATTGCAAGTTTTCTCGTaGATGCAGTCCTGGCACCTC +
Preference number: 4 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTLQVFS*MQSWHL
Trigger: GAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAA...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCCAGATGGCTCCCATCTaGCACGTTCCTAAGTCTAAA +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETQMAPI*HVPKSK
Trigger: TTTAGACTTAGGAACGTGTCAGATGGGAGCCATCTG...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR TCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTGCATCTCTTTTGATTTaGACTTTCCACTTTCGTCGA +
Preference number: 4 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPASLLI*TFHFRR
Trigger: TCGACGAAAGTGGAAAGTTCAAATCAAAAGAGATGC...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAACATGCTTGTTCTCATTaGTTGCATCATAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKHACSH*LHHNEA
Trigger: TGCCTCGTTATGATGCAAGCAATGAGAACAAGCATG...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGTGGAGATGGTATAGATaGTGTTGGTATAGCCATCAC +
Preference number: 4 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMWRWYR*CWYSHH
Trigger: GTGATGGCTATACCAACAGCATCTATACCATCTCCA...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR GCA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAATTGTCTGTGCATCGCTaGCTTAGATCAGTAGTGATT +
Preference number: 4 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKLSVHR*LRSVVI
Trigger: AATCACTACTGATCTAAGGCAGCGATGCACAGACAA...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp CCAAAGGGTAAGAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATTCTTTCAATTTACCTaGAGTCTTGAAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PKGKSICHVSKRCAIHYIFFQFT*SLEVPQ
Trigger: CTGAGGAACTTCAAGACTCCAGGTAAATTGAAAGAA...TATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTCTTACCCTTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTATGGAGACACAGATTCTaGTGTTATTTTTCAGCTTGT +
Preference number: 4 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLWRHRF*CYFSAC
Trigger: ACAAGCTGAAAAATAACACCAGAATCTGTGTCTCCA...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR TCA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACACACCTTTGGTTCCATTaGAATGAAACTGTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTHLWFH*NETVGS
Trigger: GGAACCCACAGTTTCATTTCAATGGAACCAAAGGTG...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp ACATTTCATCGTTTTCAACCACAGGTTCAAAGTAGTTTCTCTACAGTCCAGTATCCTTGCAGTTCTCACTaGATTTCCCACAGACATTTT +
Preference number: 4 (lower is better)
Translates to: TFHRFQPQVQSSFSTVQYPCSSH*ISHRHF
Trigger: AAAATGTCTGTGGGAAATGCAGTGAGAACTGCAAGG...ATACTGGACTGTAGAGAAACTACTTTGAACCTGTGGTTGAAAACGATGAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CCA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTTTCTTTCAATTTACCTaGAGTCTTGAAGTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPFFQFT*SLEVPQ
Trigger: CTGAGGAACTTCAAGACTCCAGGTAAATTGAAAGAA...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCCATGCTTGTTCTCATTaGTTGCATCATAACGAGGCA +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETHACSH*LHHNEA
Trigger: TGCCTCGTTATGATGCAAGCAATGAGAACAAGCATG...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR GCA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCACAAACACCATCTTTTaGATAAAAGCCCTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: FLSFFLSFFLSTIESGETTNTIF*IKALWA
Trigger: TGCCCAGAGGGCTTTTATGCAAAAGATGGTGTTTGT...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp GATCTGCCTCCGCGAAGCCGCCGGCGATCTTCACTGCCCAGTGGTTaGTGTAGACGCGCGTCCGGCATACCGGGAGCAGACAGCCGGCGA +
Preference number: 5 (lower is better)
Translates to: DLPPRSRRRSSLPSG*CRRASGIPGADSRR
Trigger: TCGCCGGCTGTCTGCTCCCGGTATGCCGGACGCGCGTCTACACCAACCACTGGGCAGTGAAGATCGCCGGCGGCTTCGCGGAGGCAGATC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 90 bp GCTGGCTATGCGATCTGCCTCCGCGAAGCCGCCGGCGATCTTCACTaGCCAGTGGTTGGTGTAGACGCGCGTCCGGCATACCGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: AGYAICLREAAGDLH*PVVGVDARPAYREQ
Trigger: CTGCTCCCGGTATGCCGGACGCGCGTCTACACCAACCACTGGGCAGTGAAGATCGCCGGCGGCTTCGCGGAGGCAGATCGCATAGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 90 bp TCGCAGCAGTCCTGGGATCTGCGGGAGTGGGAGGCATTGCAGCAATaGAGGCAGCGGTTGTCGTCCATGTCCAGCAGCAGGCCAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SQQSWDLREWEALQQ*RQRLSSMSSSRPAE
Trigger: CTCAGCTGGCCTGCTGCTGGACATGGACGACAACCGCTGCCTCCATTGCTGCAATGCCTCCCACTCCCGCAGATCCCAGGACTGCTGCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGCGGGAGTGGGAGGCATaGCAGCAATGGAGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: FCKGAGAQLACGLSALRLREWEA*QQWRQR
Trigger: CCGCTGCCTCCATTGCTGCAATGCCTCCCACTCCCG...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp CCTTGCCCAGTTGAAACCAGCCAGGTCGGCAGGAGAGGCACTGCATaGTGTGTGGTCCTTCGCAGGTCCTGCAAGAGCTGTGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: PCPVETSQVGRRGTA*CVVLRRSCKSCGRA
Trigger: TGCTCTGCCACAGCTCTTGCAGGACCTGCGAAGGACCACACAGCATGCAGTGCCTCTCCTGCCGACCTGGCTGGTTTCAACTGGGCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp GTCACAAGTGGGGTGGCACCTCTCACAGGTCTGGGCGTGTTGGTCTaGATAGTAGTGCTCAGGGCAAGCGCGGTGGCACTGTCCCTTGGA +
Preference number: 5 (lower is better)
Translates to: VTSGVAPLTGLGVLV*IVVLRASAVALSLG
Trigger: TCCAAGGGACAGTGCCACCGCGCTTGCCCTGAGCACTACTATGCAGACCAACACGCCCAGACCTGTGAGAGGTGCCACCCCACTTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp AGCGGTTGTCGTCCATGTCCAGCAGCAGGCCAGCTGAGCACCCGGTaGAGTTCTTGCTGCCTGGACCCTTGCATTCCATGCAGCTCTCGT +
Preference number: 5 (lower is better)
Translates to: SGCRPCPAAGQLSTR*SSCCLDPCIPCSSR
Trigger: ACGAGAGCTGCATGGAATGCAAGGGTCCAGGCAGCAAGAACTGCACCGGGTGCTCAGCTGGCCTGCTGCTGGACATGGACGACAACCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp TCTGTGGAACTCTGGCAGTCGCAGCAGTCCTGGGATCTGCGGGAGTaGGAGGCATTGCAGCAATGGAGGCAGCGGTTGTCGTCCATGTCC +
Preference number: 5 (lower is better)
Translates to: SVELWQSQQSWDLRE*EALQQWRQRLSSMS
Trigger: GGACATGGACGACAACCGCTGCCTCCATTGCTGCAATGCCTCCCACTCCCGCAGATCCCAGGACTGCTGCGACTGCCAGAGTTCCACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGACGGCTGCACACTCCTaGGGTGCCGTGCAGACATCA +
Preference number: 5 (lower is better)
Translates to: FCKGAGAQLACGLSALRLTAAHS*GAVQTS
Trigger: TGATGTCTGCACGGCACCCAAGGAGTGTGCAGCCGT...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp GCCCCAGAGCAAGTAGCACAGAAGCGATGGCAGGGCTGGCAGTCGTaGCCATTGAAGAACTGTCCATCCTCGCAGGTGACCGAACAGCGG +
Preference number: 5 (lower is better)
Translates to: APEQVAQKRWQGWQS*PLKNCPSSQVTEQR
Trigger: CCGCTGTTCGGTCACCTGCGAGGATGGACAGTTCTTCAATGGTCACGACTGCCAGCCCTGCCATCGCTTCTGTGCTACTTGCTCTGGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 90 bp TGCACTCATCTGTGGAACTCTGGCAGTCGCAGCAGTCCTGGGATCTaGGGGAGTGGGAGGCATTGCAGCAATGGAGGCAGCGGTTGTCGT +
Preference number: 5 (lower is better)
Translates to: CTHLWNSGSRSSPGI*GSGRHCSNGGSGCR
Trigger: ACGACAACCGCTGCCTCCATTGCTGCAATGCCTCCCACTCCCGCAGATCCCAGGACTGCTGCGACTGCCAGAGTTCCACAGATGAGTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp CAGTTGAAACCAGCCAGGTCGGCAGGAGAGGCACTGCATGCTGTGTaGTCCTTCGCAGGTCCTGCAAGAGCTGTGGCAGAGCACACACTG +
Preference number: 5 (lower is better)
Translates to: QLKPARSAGEALHAV*SFAGPARAVAEHTL
Trigger: CAGTGTGTGCTCTGCCACAGCTCTTGCAGGACCTGCGAAGGACCACACAGCATGCAGTGCCTCTCCTGCCGACCTGGCTGGTTTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp AACTCAGCCTCCCTGGCTGGAAGGATGCACTCATCTGTGGAACTCTaGCAGTCGCAGCAGTCCTGGGATCTGCGGGAGTGGGAGGCATTG +
Preference number: 5 (lower is better)
Translates to: NSASLAGRMHSSVEL*QSQQSWDLREWEAL
Trigger: CAATGCCTCCCACTCCCGCAGATCCCAGGACTGCTGCGACTGCCAGAGTTCCACAGATGAGTGCATCCTTCCAGCCAGGGAGGCTGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp GCTCGTAAAACTCAGCCTCCCTGGCTGGAAGGATGCACTCATCTGTaGAACTCTGGCAGTCGCAGCAGTCCTGGGATCTGCGGGAGTGGG +
Preference number: 5 (lower is better)
Translates to: ARKTQPPWLEGCTHL*NSGSRSSPGICGSG
Trigger: CCCACTCCCGCAGATCCCAGGACTGCTGCGACTGCCAGAGTTCCACAGATGAGTGCATCCTTCCAGCCAGGGAGGCTGAGTTTTACGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp GGCTTTTCAGTGGGCACGGCTTCATTCCAGTCCTTGCCTTCCACCTaGGGCCAGGTGGACCAGAGACACGTCCCATGCCATAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: GFSVGTASFQSLPST*GQVDQRHVPCHSCN
Trigger: GTTGCAGCTATGGCATGGGACGTGTCTCTGGTCCACCTGGCCTCAGGTGGAAGGCAAGGACTGGAATGAAGCCGTGCCCACTGAAAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp AGCAAAGCTCACAGTTGTCTGGGCAGGGTAGGCAGGCGTGTCCCTTaGCAGGATAATGGCCCACAGGGCAGTTCTCCAGACATTCCCCGT +
Preference number: 5 (lower is better)
Translates to: SKAHSCLGRVGRRVP*QDNGPQGSSPDIPR
Trigger: ACGGGGAATGTCTGGAGAACTGCCCTGTGGGCCATTATCCTGCCAAGGGACACGCCTGCCTACCCTGCCCAGACAACTGTGAGCTTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTCTACAGGAGGTGCAGTaGGAAGGGCCACTACCTTGG +
Preference number: 5 (lower is better)
Translates to: FLQRSWGPASVWTVSSEALQEVQ*EGPLPW
Trigger: CCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTAG...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp GGAGACACAGTCCTCGGAACACTTTTCACAGCTGCCACTGGTGACTaGTGGCCAAGTGCCTTGGGGACAGGAAGGAACACAGGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: GDTVLGTLFTAATGD*WPSALGTGRNTGLQ
Trigger: CTGCAGGCCTGTGTTCCTTCCTGTCCCCAAGGCACTTGGCCATCAGTCACCAGTGGCAGCTGTGAAAAGTGTTCCGAGGACTGTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp GATCTGTCCTACGTTGATGAATCCGTACTTGCTGGCTATGCGATCTaGCTCCGCGAAGCCGCCGGCGATCTTCACTGCCCAGTGGTTGGT +
Preference number: 5 (lower is better)
Translates to: DLSYVDESVLAGYAI*LREAAGDLHCPVVG
Trigger: ACCAACCACTGGGCAGTGAAGATCGCCGGCGGCTTCGCGGAGGCAGATCGCATAGCCAGCAAGTACGGATTCATCAACGTAGGACAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 90 bp CAGACATTCCCCGTGGTACAGGAAGCGCTCCTGACCATGCTTGTCTaGTCTACAGGAGGTGCAGTTGGAAGGGCCACTACCTTGGCATCC +
Preference number: 5 (lower is better)
Translates to: QTFPVVQEALLTMLV*STGGAVGRATTLAS
Trigger: GGATGCCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCAGACAAGCATGGTCAGGAGCGCTTCCTGTACCACGGGGAATGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp TGTAGCCCGAGCCAGTGCAATTCTCACAGGCTCGGTGGCAGGGCTTaGATTCTCCCAACTCTTGGTCTCCATGGAAGCCAGGGCCACAAT +
Preference number: 5 (lower is better)
Translates to: CSPSQCNSHRLGGRA*ILPTLGLHGSQGHN
Trigger: ATTGTGGCCCTGGCTTCCATGGAGACCAAGAGTTGGGAGAATGCAAGCCCTGCCACCGAGCCTGTGAGAATTGCACTGGCTCGGGCTACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp TCACCAAAGATGGCTTTTCAGTGGGCACGGCTTCATTCCAGTCCTTaGCTTCCACCTGAGGCCAGGTGGACCAGAGACACGTCCCATGCC +
Preference number: 5 (lower is better)
Translates to: SPKMAFQWARLHSSP*LPPEARWTRDTSHA
Trigger: GGCATGGGACGTGTCTCTGGTCCACCTGGCCTCAGGTGGAAGGCAAGGACTGGAATGAAGCCGTGCCCACTGAAAAGCCATCTTTGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp AGGACAAGCAACTCCACGCCTCCTTTCCGCTGCACTTGTCACAAGTaGGGTGGCACCTCTCACAGGTCTGGGCGTGTTGGTCTGCATAGT +
Preference number: 5 (lower is better)
Translates to: RTSNSTPPFRCTCHK*GGTSHRSGRVGLHS
Trigger: ACTATGCAGACCAACACGCCCAGACCTGTGAGAGGTGCCACCCCACTTGTGACAAGTGCAGCGGAAAGGAGGCGTGGAGTTGCTTGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp GCAGCAGCAACAGCATGGCGCCAGAGGTCACTAGCAGAGCAGTCTTaGTGTGCTCGTAAAACTCAGCCTCCCTGGCTGGAAGGATGCACT +
Preference number: 5 (lower is better)
Translates to: AAATAWRQRSLAEQS*CARKTQPPWLEGCT
Trigger: AGTGCATCCTTCCAGCCAGGGAGGCTGAGTTTTACGAGCACACCAAGACTGCTCTGCTAGTGACCTCTGGCGCCATGCTGTTGCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp AAAAGTCTCTCTGGGACAGGTATAGCACTGGTCCTCAGAAGGCCCTaGGCAGCGGGAGCATTTCTTGTGACACGGCTGGCACCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: KSLSGTGIALVLRRP*AAGAFLVTRLAPVG
Trigger: TCCCACAGGTGCCAGCCGTGTCACAAGAAATGCTCCCGCTGCTCAGGGCCTTCTGAGGACCAGTGCTATACCTGTCCCAGAGAGACTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp ACTCTTGGTCTCCATGGAAGCCAGGGCCACAATCCTGCACACAGCTaGCACCGGAGAGAAAGAAGCCCTCCTCACACCAGTAGCACTCAT +
Preference number: 5 (lower is better)
Translates to: TLGLHGSQGHNPAHS*HRRERSPPHTSSTH
Trigger: ATGAGTGCTACTGGTGTGAGGAGGGCTTCTTTCTCTCCGGTGGCAGCTGTGTGCAGGATTGTGGCCCTGGCTTCCATGGAGACCAAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp GCAACCCTTCTTGACAGCTGCTGCATTGGTTGTAGCCCGAGCCAGTaGAATTCTCACAGGCTCGGTGGCAGGGCTTGCATTCTCCCAACT +
Preference number: 5 (lower is better)
Translates to: ATLLDSCCIGCSPSQ*NSHRLGGRACILPT
Trigger: AGTTGGGAGAATGCAAGCCCTGCCACCGAGCCTGTGAGAATTGCACTGGCTCGGGCTACAACCAATGCAGCAGCTGTCAAGAAGGGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp TATCGCAAGACTGGCAGTCTGTGGGCCGTGGACCTCGGCATGACTTaGAGCTCTTGTCACACTTCTCACACCTACCGCTGGTGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: YRKTGSLWAVDLGMT*SSCHTSHTYRWCFL
Trigger: GAGAAAGCACCAGCGGTAGGTGTGAGAAGTGTGACAAGAGCTGCAAGTCATGCCGAGGTCCACGGCCCACAGACTGCCAGTCTTGCGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp CATCTGTGGGGTCTTCCACTCGGCTGTAGCGGAAGCGTTCCACTTTaGGAAACTCGTTGGTTGGGGAGTATGGCTGTACGGACGTGCCAT +
Preference number: 5 (lower is better)
Translates to: HLWGLPLGCSGSVPL*ETRWLGSMAVRTCH
Trigger: ATGGCACGTCCGTACAGCCATACTCCCCAACCAACGAGTTTCCCAAAGTGGAACGCTTCCGCTACAGCCGAGTGGAAGACCCCACAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 90 bp GGAGAGGCACTGATTACCATGGCTGCCAAAGCAGGACTCGCAGTTTaGGGCACACTTCCGGCATCTCTTCTTGTCAGCATGGTAGTGGCC +
Preference number: 5 (lower is better)
Translates to: GEALITMAAKAGLAV*GTLPASLLVSMVVA
Trigger: GGCCACTACCATGCTGACAAGAAGAGATGCCGGAAGTGTGCCCCAAACTGCGAGTCCTGCTTTGGCAGCCATGGTAATCAGTGCCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 90 bp GGAAGCGCTCCTGACCATGCTTGTCTGCTCTACAGGAGGTGCAGTTaGAAGGGCCACTACCTTGGCATCCTTGACAAGTGTAGTGGCAGG +
Preference number: 5 (lower is better)
Translates to: GSAPDHACLLYRRCS*KGHYLGILDKCSGR
Trigger: CCTGCCACTACACTTGTCAAGGATGCCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCAGACAAGCATGGTCAGGAGCGCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGTTGATGAATCCGTACTaGCTGGCTATGCGATCTGCC +
Preference number: 5 (lower is better)
Translates to: FCKGAGAQLACGLSALRLLMNPY*LAMRSA
Trigger: GGCAGATCGCATAGCCAGCAAGTACGGATTCATCAA...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCGCCGTTCTCAAAGGCTaGCCGGGTGAGGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: LSFFLSTIESGETSHPSSAVLKG*PGEGSW
Trigger: CCAGCTCCCCTCACCCGGCAAGCCTTTGAGAACGGC...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGGTAGACAGTGCCATCTaGGCCCATATAGACGATGTC +
Preference number: 5 (lower is better)
Translates to: FCKGAGAQLACGLSALRLVDSAI*AHIDDV
Trigger: GACATCGTCTATATGGGCCAAGATGGCACTGTCTAC...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp AAATGTATCGCAAGACTGGCAGTCTGTGGGCCGTGGACCTCGGCATaGCTTGCAGCTCTTGTCACACTTCTCACACCTACCGCTGGTGCT +
Preference number: 5 (lower is better)
Translates to: KCIARLAVCGPWTSA*LAALVTLLTPTAGA
Trigger: AGCACCAGCGGTAGGTGTGAGAAGTGTGACAAGAGCTGCAAGTCATGCCGAGGTCCACGGCCCACAGACTGCCAGTCTTGCGATACATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp GTTGAAAGCGATCCCGACAGTGCAGTGAGAGTTGTTTGCAGTGGCTaGCACTTCTCCGGCACAGCGGGTCCCATGCTTGTTCTCATTGCT +
Preference number: 5 (lower is better)
Translates to: VESDPDSAVRVVCSG*HFSGTAGPMLVLIA
Trigger: AGCAATGAGAACAAGCATGGGACCCGCTGTGCCGGAGAAGTGGCAGCCACTGCAAACAACTCTCACTGCACTGTCGGGATCGCTTTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 90 bp GCCATCACAAGAACAGTGATCCTTGCTCCGTCCACCATTGCCAGATaGCCACACAAACACAGATCCAAGGCCTCTCCGCCCCATTCTCAC +
Preference number: 5 (lower is better)
Translates to: AITRTVILAPSTIAR*PHKHRSKASPPHSH
Trigger: GTGAGAATGGGGCGGAGAGGCCTTGGATCTGTGTTTGTGTGGGCATCTGGCAATGGTGGACGGAGCAAGGATCACTGTTCTTGTGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 90 bp ACCAGAGACACGTCCCATGCCATAGCTGCAACCCTTCTTGACAGCTaGTGCATTGGTTGTAGCCCGAGCCAGTGCAATTCTCACAGGCTC +
Preference number: 5 (lower is better)
Translates to: TRDTSHAIAATLLDS*CIGCSPSQCNSHRL
Trigger: GAGCCTGTGAGAATTGCACTGGCTCGGGCTACAACCAATGCAGCAGCTGTCAAGAAGGGTTGCAGCTATGGCATGGGACGTGTCTCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp CTTCCACTCGGCTGTAGCGGAAGCGTTCCACTTTGGGAAACTCGTTaGTTGGGGAGTATGGCTGTACGGACGTGCCATAGAGGACTAAGG +
Preference number: 5 (lower is better)
Translates to: LPLGCSGSVPLWETR*LGSMAVRTCHRGLR
Trigger: CCTTAGTCCTCTATGGCACGTCCGTACAGCCATACTCCCCAACCAACGAGTTTCCCAAAGTGGAACGCTTCCGCTACAGCCGAGTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 90 bp CAGGGTCACAGGGACCTGCATAATCTTCAGCACCGTAGTCATCTGTaGGGTCTTCCACTCGGCTGTAGCGGAAGCGTTCCACTTTGGGAA +
Preference number: 5 (lower is better)
Translates to: QGHRDLHNLQHRSHL*GLPLGCSGSVPLWE
Trigger: TTCCCAAAGTGGAACGCTTCCGCTACAGCCGAGTGGAAGACCCCACAGATGACTACGGTGCTGAAGATTATGCAGGTCCCTGTGACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 90 bp GCACTCTTTGCAAGTTTTCTCGTGGATGCAGTCCTGGCACCTCTCTaGACAGTGCTTGCAGACTCCTTCCACGGCCACGTGCTTTTCAGG +
Preference number: 5 (lower is better)
Translates to: ALFASFLVDAVLAPL*TVLADSFHGHVLFR
Trigger: CCTGAAAAGCACGTGGCCGTGGAAGGAGTCTGCAAGCACTGTCCAGAGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp AAGTCAGGCATGCACTCTTTGCAAGTTTTCTCGTGGATGCAGTCCTaGCACCTCTCTGGACAGTGCTTGCAGACTCCTTCCACGGCCACG +
Preference number: 5 (lower is better)
Translates to: KSGMHSLQVFSWMQS*HLSGQCLQTPSTAT
Trigger: CGTGGCCGTGGAAGGAGTCTGCAAGCACTGTCCAGAGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCATGCCTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp TCACTAGCAGAGCAGTCTTGGTGTGCTCGTAAAACTCAGCCTCCCTaGCTGGAAGGATGCACTCATCTGTGGAACTCTGGCAGTCGCAGC +
Preference number: 5 (lower is better)
Translates to: SLAEQSWCARKTQPP*LEGCTHLWNSGSRS
Trigger: GCTGCGACTGCCAGAGTTCCACAGATGAGTGCATCCTTCCAGCCAGGGAGGCTGAGTTTTACGAGCACACCAAGACTGCTCTGCTAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TTTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTCCGATCTGTCCTACGTaGATGAATCCGTACTTGCTG +
Preference number: 5 (lower is better)
Translates to: FLQRSWGPASVWTVSSEAPICPT*MNPYLL
Trigger: CAGCAAGTACGGATTCATCAACGTAGGACAGATCGG...AGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TCTGGCCCTGGTGCTGCCTTCCCTCCGTCTGACCTTCCTCTGCTCTTAGGTGGCCATTCACATCGCAACTaGCCAGAGCATCGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: SGPGAAFPPSDLPLLLGGHSHRN*PEHRSF
Trigger: AAAACTACGATGCTCTGGCAAGTTGCGATGTGAATG...GCCACCTAAGAGCAGAGGAAGGTCAGACGGAGGGAAGGCAGCACCAGGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TTCTGCAAAGGAGCTGGGGCCCAGCTAGCGTGTGGACTGTCAGCTCTGAGGCTGAGAAGAGTGACAAGGTaGATTCTGGCTCGTTGCATC +
Preference number: 5 (lower is better)
Translates to: FCKGAGAQLACGLSALRLRRVTR*ILARCI
Trigger: GATGCAACGAGCCAGAATCAACCTTGTCACTCTTCT...CAGCCTCAGAGCTGACAGTCCACACGCTAGCTGGGCCCCAGCTCCTTTGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp AATCACCTGGTCCTCGTCAAGATAGCTGCTCCTGTAGGAGGAGTATaGCACGGTAGGTTCTGCCAGCTTTTCGTACCGCCCCTTTGCCAC +
Preference number: 5 (lower is better)
Translates to: NHLVLVKIAAPVGGV*HGRFCQLFVPPLCH
Trigger: GTGGCAAAGGGGCGGTACGAAAAGCTGGCAGAACCTACCGTGTCATACTCCTCCTACAGGAGCAGCTATCTTGACGAGGACCAGGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp AGTCACTGCAGTGATCTGGTCCTGGCCCGTCACATCCAACCTCACTaGATTCAGGGTCACAGGGACCTGCATAATCTTCAGCACCGTAGT +
Preference number: 5 (lower is better)
Translates to: SHCSDLVLARHIQPH*IQGHRDLHNLQHRS
Trigger: ACTACGGTGCTGAAGATTATGCAGGTCCCTGTGACCCTGAATGCAGTGAGGTTGGATGTGACGGGCCAGGACCAGATCACTGCAGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 90 bp GGTACAGGAAGCGCTCCTGACCATGCTTGTCTGCTCTACAGGAGGTaGAGTTGGAAGGGCCACTACCTTGGCATCCTTGACAAGTGTAGT +
Preference number: 5 (lower is better)
Translates to: GTGSAPDHACLLYRR*SWKGHYLGILDKCS
Trigger: ACTACACTTGTCAAGGATGCCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCAGACAAGCATGGTCAGGAGCGCTTCCTGTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp TTGCAAGTTTTCTCGTGGATGCAGTCCTGGCACCTCTCTGGACAGTaGTTGCAGACTCCTTCCACGGCCACGTGCTTTTCAGGGCAAGTT +
Preference number: 5 (lower is better)
Translates to: LQVFSWMQSWHLSGQ*LQTPSTATCFSGQV
Trigger: AACTTGCCCTGAAAAGCACGTGGCCGTGGAAGGAGTCTGCAAGCACTGTCCAGAGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp TGCTTTCTCCATAATATCCATCCCTGCATTGCAGCAAGCACTCCTTaGCCAGTTGAAACCAGCCAGGTCGGCAGGAGAGGCACTGCATGC +
Preference number: 5 (lower is better)
Translates to: CFLHNIHPCIAASTP*PVETSQVGRRGTAC
Trigger: GCATGCAGTGCCTCTCCTGCCGACCTGGCTGGTTTCAACTGGGCAAGGAGTGCTTGCTGCAATGCAGGGATGGATATTATGGAGAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp CTTCCATGGAATGATCAAAGAGCCTGTTGGCCAAGAGCTGGGATCTaGTTCCTGAGGGTGATGTCAGATAGATGGCCAGGTCTCCCCTCC +
Preference number: 5 (lower is better)
Translates to: LPWNDQRACWPRAGI*FLRVMSDRWPGLPS
Trigger: GGAGGGGAGACCTGGCCATCTATCTGACATCACCCTCAGGAACCAGATCCCAGCTCTTGGCCAACAGGCTCTTTGATCATTCCATGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 90 bp GGTCTGCATAGTAGTGCTCAGGGCAAGCGCGGTGGCACTGTCCCTTaGAGCGTAGGAGAAAGAAAAATGTATCGCAAGACTGGCAGTCTG +
Preference number: 5 (lower is better)
Translates to: GLHSSAQGKRGGTVP*SVGERKMYRKTGSL
Trigger: CAGACTGCCAGTCTTGCGATACATTTTTCTTTCTCCTACGCTCCAAGGGACAGTGCCACCGCGCTTGCCCTGAGCACTACTATGCAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTTTGCTCCGTCCACCATaGCCAGATGCCCACACAAAC +
Preference number: 5 (lower is better)
Translates to: KVLETVSFLLALVLPSLRLLRPP*PDAHTN
Trigger: GTTTGTGTGGGCATCTGGCAATGGTGGACGGAGCAA...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCGCTCGGTGGCAGGGCTaGCATTCTCCCAACTCTTGG +
Preference number: 5 (lower is better)
Translates to: LSFFLSTIESGETSHPSSARWQG*HSPNSW
Trigger: CCAAGAGTTGGGAGAATGCAAGCCCTGCCACCGAGC...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCGCACTCCTTGCCCAGTaGAAACCAGCCAGGTCGGCA +
Preference number: 5 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSALLAQ*KPARSA
Trigger: TGCCGACCTGGCTGGTTTCAACTGGGCAAGGAGTGC...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTTGCTGCCTGGACCCTaGCATTCCATGCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARLLPGP*HSMQLS
Trigger: CGAGAGCTGCATGGAATGCAAGGGTCCAGGCAGCAA...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCCAATGGAGGCAGCGGTaGTCGTCCATGTCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LSFFLSTIESGETSHPSSQWRQR*SSMSSS
Trigger: GCTGCTGGACATGGACGACAACCGCTGCCTCCATTG...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp TTAGCGTTCAAATGTCCCGCACGGGAAGTCCTGACAATAACATGCTaGACGTCTCTCCAGGTCAGAAACGGATTGGCTTCTAGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LAFKCPAREVLTITC*TSLQVRNGLASRAR
Trigger: CCTGGCCCTAGAAGCCAATCCGTTTCTGACCTGGAGAGACGTGCAGCATGTTATTGTCAGGACTTCCCGTGCGGGACATTTGAACGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp AGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGCGGTGGCACTGTCCCTaGGAGCGTAGGAGAAAGAAA +
Preference number: 5 (lower is better)
Translates to: SSTADSSIPTYSGWMQGKRWHCP*ERRRKK
Trigger: TTTCTTTCTCCTACGCTCCAAGGGACAGTGCCACCG...CTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp CTTCCCCGTGTAGCCTCTCTTCCAGGCTCCTTCGATATTCATGTCTaGCTGGCAAGGATGGGTGTTGTCACTGCAGTGCATGTACCACAT +
Preference number: 5 (lower is better)
Translates to: LPRVASLPGSFDIHV*LARMGVVTAVHVPH
Trigger: ATGTGGTACATGCACTGCAGTGACAACACCCATCCTTGCCAGTCAGACATGAATATCGAAGGAGCCTGGAAGAGAGGCTACACGGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 90 bp GCAGCTGATACAGTCTTCCTGAGTTGGTCCCCAGCACTTGGCACATaGGGCTTCACAGGTTTGGCAGTGGCCTTGGTCATCAATGTATTC +
Preference number: 5 (lower is better)
Translates to: AADTVFLSWSPALGT*GFTGLAVALVINVF
Trigger: GAATACATTGATGACCAAGGCCACTGCCAAACCTGTGAAGCCTCATGTGCCAAGTGCTGGGGACCAACTCAGGAAGACTGTATCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp TCTGCCCAGGACTCTTCCGTAGCATCCTTGCAGATGGCTCCCATCTaGCACGTTCCTAAGTCTAAAAGATATCCACTGGGGCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: SAQDSSVASLQMAPI*HVPKSKRYPLGQLE
Trigger: TTCCAGCTGCCCCAGTGGATATCTTTTAGACTTAGGAACGTGTCAGATGGGAGCCATCTGCAAGGATGCTACGGAAGAGTCCTGGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS GCA 90 bp GGCACTGTAGATGTGCACATGCTGTGGGTTGTAGCTGACAGACTTTaGCTCCACCATGTCAGTGACATCACCATCCAGCATTCTCACACC +
Preference number: 5 (lower is better)
Translates to: GTVDVHMLWVVADRL*LHHVSDITIQHSHT
Trigger: GGTGTGAGAATGCTGGATGGTGATGTCACTGACATGGTGGAGGCAAAGTCTGTCAGCTACAACCCACAGCATGTGCACATCTACAGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 90 bp TCATTAGCGTTCAAATGTCCCGCACGGGAAGTCCTGACAATAACATaGTGCACGTCTCTCCAGGTCAGAAACGGATTGGCTTCTAGGGCC +
Preference number: 5 (lower is better)
Translates to: SLAFKCPAREVLTIT*CTSLQVRNGLASRA
Trigger: GGCCCTAGAAGCCAATCCGTTTCTGACCTGGAGAGACGTGCAGCATGTTATTGTCAGGACTTCCCGTGCGGGACATTTGAACGCTAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 90 bp TCAGGAAGTAGCCATATTTACAGGAGAGGCACTGATTACCATGGCTaGCAAAGCAGGACTCGCAGTTTGGGGCACACTTCCGGCATCTCT +
Preference number: 5 (lower is better)
Translates to: SGSSHIYRRGTDYHG*QSRTRSLGHTSGIS
Trigger: AGAGATGCCGGAAGTGTGCCCCAAACTGCGAGTCCTGCTTTGGCAGCCATGGTAATCAGTGCCTCTCCTGTAAATATGGCTACTTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 90 bp CCGCTCAAACATGTAATATCCTGTAGCACACGAGGTACAGGCTCCTaGATCATCCTCAGTGCATCCCAGACATCCTTCCTCACAGGGCAT +
Preference number: 5 (lower is better)
Translates to: PLKHVISCSTRGTGS*IILSASQTSFLTGH
Trigger: ATGCCCTGTGAGGAAGGATGTCTGGGATGCACTGAGGATGATCCAGGAGCCTGTACCTCGTGTGCTACAGGATATTACATGTTTGAGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp AACTTTCCACTTTCGTCGATCCTGCAGCAGACTCCTCACCAAAGATaGCTTTTCAGTGGGCACGGCTTCATTCCAGTCCTTGCCTTCCAC +
Preference number: 5 (lower is better)
Translates to: NFPLSSILQQTPHQR*LFSGHGFIPVLAFH
Trigger: GTGGAAGGCAAGGACTGGAATGAAGCCGTGCCCACTGAAAAGCCATCTTTGGTGAGGAGTCTGCTGCAGGATCGACGAAAGTGGAAAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp TGGAGCGTAGGAGAAAGAAAAATGTATCGCAAGACTGGCAGTCTGTaGGCCGTGGACCTCGGCATGACTTGCAGCTCTTGTCACACTTCT +
Preference number: 5 (lower is better)
Translates to: WSVGERKMYRKTGSL*AVDLGMTCSSCHTS
Trigger: AGAAGTGTGACAAGAGCTGCAAGTCATGCCGAGGTCCACGGCCCACAGACTGCCAGTCTTGCGATACATTTTTCTTTCTCCTACGCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp CGAGAGGTTGTGCAGAGTCTATCTCTCTCTCTCTGGGCTTTGGGGGACCCAGATGCTTGTTCTCATTGCTaGCATCATAACGAGGCATCG +
Preference number: 5 (lower is better)
Translates to: REVVQSLSLSLWALGDPDACSHC*HHNEAS
Trigger: CGATGCCTCGTTATGATGCAAGCAATGAGAACAAGC...ATCTGGGTCCCCCAAAGCCCAGAGAGAGAGAGATAGACTCTGCACAACCTCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTGGCCCATCCACAGTCTaGCCATCGTCATCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: CKVRTKANTQTSANALVAGPSTV*PSSSGP
Trigger: GGGACCAGATGACGATGGCAAGACTGTGGATGGGCC...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp ATGGGGGCTTTAGCATCCACACCCCAGCTCCTTTCCAAGACCATCACTCACTCTCAGCTGGAACAGTTCTaGAATCCTGGCCCATTGCAT +
Preference number: 5 (lower is better)
Translates to: MGALASTPQLLSKTITHSQLEQF*NPGPLH
Trigger: ATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCTG...AGAGTGAGTGATGGTCTTGGAAAGGAGCTGGGGTGTGGATGCTAAAGCCCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCCACTCCAGACAGTTTTaGTGGCAGGGGACACACTGG +
Preference number: 5 (lower is better)
Translates to: LSFFLSTIESGETSHPSSHSRQF*WQGTHW
Trigger: CCAGTGTGTCCCCTGCCACAAAAACTGTCTGGAGTG...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp AAAGTCTTGGAAACAGTTTCCTTCCTTCTGGCCCTGGTGCTGCCTTCCCTCCGTTCTTCCTTGGGGCCATaGCACTCCAGACAGTTTTTG +
Preference number: 5 (lower is better)
Translates to: KVLETVSFLLALVLPSLRSSLGP*HSRQFL
Trigger: CAAAAACTGTCTGGAGTGCAATGGCCCCAAGGAAGA...ACGGAGGGAAGGCAGCACCAGGGCCAGAAGGAAGGAAACTGTTTCCAAGACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp ATGCTCCAGGTAATTGACGTGATGGTTGGGATTATCCGAGCAGCCTaGGGCTTTGTAGATGGAGCGCACTGCACTGTTTGGTCGAATGGT +
Preference number: 5 (lower is better)
Translates to: MLQVIDVMVGIIRAA*GFVDGAHCTVWSNG
Trigger: ACCATTCGACCAAACAGTGCAGTGCGCTCCATCTACAAAGCCTCAGGCTGCTCGGATAATCCCAACCATCACGTCAATTACCTGGAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 90 bp GGAAGGAACACAGGCCTGCAGCCACAGGTACATACCTGTGGGACATaGAGCGCAGAGAGATCCATTGCAGGTTTTACAAGAAGAGTGACA +
Preference number: 5 (lower is better)
Translates to: GRNTGLQPQVHTCGT*SAERSIAGFTRRVT
Trigger: TGTCACTCTTCTTGTAAAACCTGCAATGGATCTCTCTGCGCTTCATGTCCCACAGGTATGTACCTGTGGCTGCAGGCCTGTGTTCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp ATGGGGGCTTTAGCATCCACACCCCAGCTCCTTTCCAAGACCATCACTCACTCTTCGAATGGTCTTGATTaGTCGGTCTGTGCTTTCCAC +
Preference number: 5 (lower is better)
Translates to: MGALASTPQLLSKTITHSSNGLD*SVCAFH
Trigger: GTGGAAAGCACAGACCGACAAATCAAGACCATTCGA...AGAGTGAGTGATGGTCTTGGAAAGGAGCTGGGGTGTGGATGCTAAAGCCCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS CCA 90 bp CCATTCTTTCAATTTACCTGGAGTCTTGAAGTTCCTCAGCTGAGATaGCGTATCATAAACTTCGAGGACCCAGTCCCCAGCAGCCCGTTC +
Preference number: 5 (lower is better)
Translates to: PFFQFTWSLEVPQLR*RIINFEDPVPSSPF
Trigger: GAACGGGCTGCTGGGGACTGGGTCCTCGAAGTTTATGATACGCCATCTCAGCTGAGGAACTTCAAGACTCCAGGTAAATTGAAAGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 90 bp TTTTGTGGCAGGGGACACACTGGCGCATGTCAGGGTAGAAGCTCTTaGGACAGGAACGATGGCACATGTCATTGTATAGAAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: FCGRGHTGACQGRSS*DRNDGTCHCIERSQ
Trigger: CTGACTTCTTTCTATACAATGACATGTGCCATCGTTCCTGTCCCAAGAGCTTCTACCCTGACATGCGCCAGTGTGTCCCCTGCCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TCCTGTCCACTTCCCTGGCTGCAGAGGAAAGCCAGAAAAATGATTGAGGCAAAGCCGATCTGTCCTACGTaGATGAATCCGTACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SCPLPWLQRKARKMIEAKPICPT*MNPYLL
Trigger: CAGCAAGTACGGATTCATCAACGTAGGACAGATCGG...CTTTGCCTCAATCATTTTTCTGGCTTTCCTCTGCAGCCAGGGAAGTGGACAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTCTCACACCTCCAATCTaGGCGTTGAAAGCGATCCCG +
Preference number: 5 (lower is better)
Translates to: CKVRTKANTQTSANALVALTPPI*ALKAIP
Trigger: CGGGATCGCTTTCAACGCCAAGATTGGAGGTGTGAG...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAAGCCGTTCTCAAAGGCTaGCCGGGTGAGGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKAVLKG*PGEGSW
Trigger: CCAGCTCCCCTCACCCGGCAAGCCTTTGAGAACGGC...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTAAGCAGGACTCGCAGTTaGGGGCACACTTCCGGCATC +
Preference number: 5 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLSRTRS*GHTSGI
Trigger: GATGCCGGAAGTGTGCCCCAAACTGCGAGTCCTGCT...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCCAGCTGGAACAGTTCTaGAATCCTGGCCCATTGCAT +
Preference number: 5 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSQLEQF*NPGPLH
Trigger: ATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCTG...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTTACAGTCTTCCTGAGTaGGTCCCCAGCACTTGGCAC +
Preference number: 5 (lower is better)
Translates to: CKVRTKANTQTSANALVAYSLPE*VPSTWH
Trigger: GTGCCAAGTGCTGGGGACCAACTCAGGAAGACTGTA...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp CTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTCCCACCCCAGCTCCATCCTGGAATTCACCTaGTCTGCACTCCAGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LSFFLSTIESGETSHPSSILEFT*SALQLL
Trigger: CAGAAGCTGGAGTGCAGACAAGGTGAATTCCAGGAT...GGAGCTGGGGTGGGAGGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTGCATTCTCCCAACTCTaGGTCTCCATGGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGAFSQL*VSMEAR
Trigger: CCTGGCTTCCATGGAGACCAAGAGTTGGGAGAATGC...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTTTGACAGCTGCTGCATaGGTTGTAGCCCGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: CKVRTKANTQTSANALVALTAAA*VVARAS
Trigger: ACTGGCTCGGGCTACAACCAATGCAGCAGCTGTCAA...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp GAAAAGCAGCACAGCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGCATGACTTGCAGCTCTaGTCACACTTCTCACACCTA +
Preference number: 5 (lower is better)
Translates to: EKQHSRLQHPYIFGLDARHDLQL*SHFSHL
Trigger: TAGGTGTGAGAAGTGTGACAAGAGCTGCAAGTCATG...CCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGCTGTGCTGCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp CTGGATCATCCTCAGTGCATCCCAGACATCCTTCCTCACAGGGCATaGATTCTTCATACTCAGAATCCTGGAATTCACCTTGTCTGCACT +
Preference number: 5 (lower is better)
Translates to: LDHPQCIPDILPHRA*ILHTQNPGIHLVCT
Trigger: AGTGCAGACAAGGTGAATTCCAGGATTCTGAGTATGAAGAATGCATGCCCTGTGAGGAAGGATGTCTGGGATGCACTGAGGATGATCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp TTTCTCCCTTTCCCTCTCTGTATTCCCCTACGATACATTCTGGGATaGAGATTCCTTTCAGAAGGTGGTAGCTCCACACACAGGACAAGC +
Preference number: 5 (lower is better)
Translates to: FLPFPLCIPLRYILG*RFLSEGGSSTHRTS
Trigger: GCTTGTCCTGTGTGTGGAGCTACCACCTTCTGAAAGGAATCTGCATCCCAGAATGTATCGTAGGGGAATACAGAGAGGGAAAGGGAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp GGAACTACAGTGTTCACAAACACCATCTTTTGCATAAAAGCCCTCTaGGCAACTGTGGTAGCACCTGCCCTCATGGAGAAGCAGAGTGTT +
Preference number: 5 (lower is better)
Translates to: GTTVFTNTIFCIKAL*ATVVAPALMEKQSV
Trigger: AACACTCTGCTTCTCCATGAGGGCAGGTGCTACCACAGTTGCCCAGAGGGCTTTTATGCAAAAGATGGTGTTTGTGAACACTGTAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp TTGTATAGAAAGAAGTCAGGCATGCACTCTTTGCAAGTTTTCTCGTaGATGCAGTCCTGGCACCTCTCTGGACAGTGCTTGCAGACTCCT +
Preference number: 5 (lower is better)
Translates to: LYRKKSGMHSLQVFS*MQSWHLSGQCLQTP
Trigger: AGGAGTCTGCAAGCACTGTCCAGAGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCATGCCTGACTTCTTTCTATACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTCAGCGGGTCCCATGCTaGTTCTCATTGCTTGCATCA +
Preference number: 5 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGQRVPC*FSLLAS
Trigger: TGATGCAAGCAATGAGAACAAGCATGGGACCCGCTG...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTATATCCATCCCTGCATaGCAGCAAGCACTCCTTGCC +
Preference number: 5 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGISIPA*QQALLA
Trigger: GGCAAGGAGTGCTTGCTGCAATGCAGGGATGGATAT...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp CCTTGGTCATCAATGTATTCTCCATCCTTGCAGATGGCTCCCATCTaGCACGTTCCTAAGTCTAAAAGATATCCACTGGGGCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: PWSSMYSPSLQMAPI*HVPKSKRYPLGQLE
Trigger: TTCCAGCTGCCCCAGTGGATATCTTTTAGACTTAGGAACGTGTCAGATGGGAGCCATCTGCAAGGATGGAGAATACATTGATGACCAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp GATGGCACATGTCATTGTATAGAAAGAAGTCAGGCATGCACTCTTTaGAAGTTTTCTCGTGGATGCAGTCCTGGCACCTCTCTGGACAGT +
Preference number: 5 (lower is better)
Translates to: DGTCHCIERSQACTL*KFSRGCSPGTSLDS
Trigger: ACTGTCCAGAGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCATGCCTGACTTCTTTCTATACAATGACATGTGCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp GACAGGAACGATGGCACATGTCATTGTATAGAAAGAAGTCAGGCATaGACTCTTTGCAAGTTTTCTCGTGGATGCAGTCCTGGCACCTCT +
Preference number: 5 (lower is better)
Translates to: DRNDGTCHCIERSQA*TLCKFSRGCSPGTS
Trigger: AGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCATGCCTGACTTCTTTCTATACAATGACATGTGCCATCGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTCAGAGCATCGTAGTTTaGCATCAGATCTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGQSIVV*HQIWVG
Trigger: ACCCACCCAGATCTGATGCAAAACTACGATGCTCTG...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCAATCCAATGCATGCCTaGCAGTTCTCACTGCATTTC +
Preference number: 5 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSNPMHA*QFSLHF
Trigger: GAAATGCAGTGAGAACTGCAAGGCATGCATTGGATT...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 90 bp TTCTGGTGTTATTTTTCAGCTTGTAGTAGTAGTGTAAGCAGTCACTaGAGTGATCTGGTCCTGGCCCGTCACATCCAACCTCACTGCATT +
Preference number: 5 (lower is better)
Translates to: FWCYFSACSSSVSSH*SDLVLARHIQPHCI
Trigger: AATGCAGTGAGGTTGGATGTGACGGGCCAGGACCAGATCACTGCAGTGACTGCTTACACTACTACTACAAGCTGAAAAATAACACCAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 90 bp GAAGACTTAACCCGCCCTTGCACTCTGTGCAGTTGTGAAATCCAATaGATGCCTTGCAGTTCTCACTGCATTTCCCACAGACATTTTTCT +
Preference number: 5 (lower is better)
Translates to: EDLTRPCTLCSCEIQ*MPCSSHCISHRHFS
Trigger: AGAAAAATGTCTGTGGGAAATGCAGTGAGAACTGCAAGGCATGCATTGGATTTCACAACTGCACAGAGTGCAAGGGCGGGTTAAGTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTGCTTGTTCTCATTGCTaGCATCATAACGAGGCATCG +
Preference number: 5 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGACSHC*HHNEAS
Trigger: CGATGCCTCGTTATGATGCAAGCAATGAGAACAAGC...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp ACATTTCATCGTTTTCAACCACAGGTTCAAAGTAGTTTCTCTACAGTCCAGTATGGCCCATCCACAGTCTaGCCATCGTCATCTGGTCCC +
Preference number: 5 (lower is better)
Translates to: TFHRFQPQVQSSFSTVQYGPSTV*PSSSGP
Trigger: GGGACCAGATGACGATGGCAAGACTGTGGATGGGCC...ATACTGGACTGTAGAGAAACTACTTTGAACCTGTGGTTGAAAACGATGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTGCTCACACTACAACTTaGTACACACCTTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGAHTTT*YTPSLF
Trigger: GAAGAGGGAAGGTGTGTACAAAGTTGTAGTGTGAGC...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTCACAAACACCATCTTTaGCATAAAAGCCCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGHKHHL*HKSPLG
Trigger: GCCCAGAGGGCTTTTATGCAAAAGATGGTGTTTGTG...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 90 bp TGCTGTTGGATCCACTCCACCTTTGGTTCCATTGAAATGAAACTGTaGGTTCCTCTGCTCGAGAGAACAGACCTTTTAATGGTCCTACTA +
Preference number: 5 (lower is better)
Translates to: CCWIHSTFGSIEMKL*VPLLERTDLLMVLL
Trigger: TAGTAGGACCATTAAAAGGTCTGTTCTCTCGAGCAGAGGAACCCACAGTTTCATTTCAATGGAACCAAAGGTGGAGTGGATCCAACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp GAGCATTTGTCACGTCTCCAAACGTTGTGCTATCCATTACATATACTCATTATGCTCACACCTCCAATCTaGGCGTTGAAAGCGATCCCG +
Preference number: 5 (lower is better)
Translates to: EHLSRLQTLCYPLHILIMLTPPI*ALKAIP
Trigger: CGGGATCGCTTTCAACGCCAAGATTGGAGGTGTGAG...CATAATGAGTATATGTAATGGATAGCACAACGTTTGGAGACGTGACAAATGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCAGCAGGACTCGCAGTTaGGGGCACACTTCCGGCATC +
Preference number: 5 (lower is better)
Translates to: FLSFFLSFFLSTIESGETSRTRS*GHTSGI
Trigger: GATGCCGGAAGTGTGCCCCAAACTGCGAGTCCTGCT...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTTTGAATCCTGGCCCATaGCATGTCAAACAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: CKVRTKANTQTSANALVALNPGP*HVKQLL
Trigger: TAACAGCTGTTTGACATGCAATGGGCCAGGATTCAA...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGGATGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTGTGGCAGGGATGGCATaGCTTCTTAAATTCGAACTT +
Preference number: 5 (lower is better)
Translates to: WMQGKDKSKHSDLSQCIGVAGMA*LLKFEL
Trigger: AAGTTCGAATTTAAGAAGCAATGCCATCCCTGCCAC...ACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp GCAGACTCCAGCATCCCTACATATTCGGGTTGGATGCAAGGTAAGGACAAAAGCTGCATCTCTTTTGATTaGAACTTTCCACTTTCGTCG +
Preference number: 5 (lower is better)
Translates to: ADSSIPTYSGWMQGKDKSCISFD*NFPLSS
Trigger: CGACGAAAGTGGAAAGTTCAAATCAAAAGAGATGCA...GCTTTTGTCCTTACCTTGCATCCAACCCGAATATGTAGGGATGCTGGAGTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCTGGAGAAGCAGAGTGTaGTCCGGCTGGCTCAGGCAC +
Preference number: 5 (lower is better)
Translates to: FLSFFLSFFLSTIESGETWRSRV*SGWLRH
Trigger: GTGCCTGAGCCAGCCGGACAACACTCTGCTTCTCCA...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGCAAGGTAAGGACAAAAGCAAACACTCAGACCTCAGCCAATGCATTGGTAGCTCGATGGCACATGTCATaGTATAGAAAGAAGTCAGGC +
Preference number: 5 (lower is better)
Translates to: CKVRTKANTQTSANALVARWHMS*YRKKSG
Trigger: GCCTGACTTCTTTCTATACAATGACATGTGCCATCG...AGCTACCAATGCATTGGCTGAGGTCTGAGTGTTTGCTTTTGTCCTTACCTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 90 bp CAAACAGCTGTTATCACATCTCTTGCAGGATTTGTAGCCACCCTCTaGAGAGTGGTCCAAGTAGTAGCTCACACTACAACTTTGTACACA +
Preference number: 5 (lower is better)
Translates to: QTAVITSLAGFVATL*RVVQVVAHTTTLYT
Trigger: TGTGTACAAAGTTGTAGTGTGAGCTACTACTTGGACCACTCTTCAGAGGGTGGCTACAAATCCTGCAAGAGATGTGATAACAGCTGTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 90 bp TTCCTAAGTCTAAAAGATATCCACTGGGGCAGCTGGAACAGTTCTTaGATCCTGGCCCATTGCATGTCAAACAGCTGTTATCACATCTCT +
Preference number: 5 (lower is better)
Translates to: FLSLKDIHWGSWNSS*ILAHCMSNSCYHIS
Trigger: AGAGATGTGATAACAGCTGTTTGACATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCTGCCCCAGTGGATATCTTTTAGACTTAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 90 bp TACAAGAAGAGTGACAAGGTTGATTCTGGCTCGTTGCATCTCTTTTaGTTTGAACTTTCCACTTTCGTCGATCCTGCAGCAGACTCCTCA +
Preference number: 5 (lower is better)
Translates to: YKKSDKVDSGSLHLF*FELSTFVDPAADSS
Trigger: TGAGGAGTCTGCTGCAGGATCGACGAAAGTGGAAAGTTCAAATCAAAAGAGATGCAACGAGCCAGAATCAACCTTGTCACTCTTCTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTTTTCACCACTTGCTGTaGGATCCACTCCACCTTTGG +
Preference number: 5 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPFHHLL*DPLHLW
Trigger: CCAAAGGTGGAGTGGATCCAACAGCAAGTGGTGAAA...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp AGAAAATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTCATTCACATCGCAACTaGCCAGAGCATCGTAGTTTT +
Preference number: 5 (lower is better)
Translates to: RKYRARRVQSCHPHSISSHSHRN*PEHRSF
Trigger: AAAACTACGATGCTCTGGCAAGTTGCGATGTGAATG...ACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAACAGCGGGTCCCATGCTaGTTCTCATTGCTTGCATCA +
Preference number: 5 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKQRVPC*FSLLAS
Trigger: TGATGCAAGCAATGAGAACAAGCATGGGACCCGCTG...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp ACATTTCATCGTTTTCAACCACAGGTTCAAAGTAGTTTCTCTACAGTCCAGTATTTGCTCCGTCCACCATaGCCAGATGCCCACACAAAC +
Preference number: 5 (lower is better)
Translates to: TFHRFQPQVQSSFSTVQYLLRPP*PDAHTN
Trigger: GTTTGTGTGGGCATCTGGCAATGGTGGACGGAGCAA...ATACTGGACTGTAGAGAAACTACTTTGAACCTGTGGTTGAAAACGATGAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTTTACAGTCATCTTCCTaGGGGCCATTGCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPLQSSS*GPLHSR
Trigger: TCTGGAGTGCAATGGCCCCAAGGAAGATGACTGTAA...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp TGGCTATCACATGCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACTTGATGAATCCGTACTaGCTGGCTATGCGATCTGCC +
Preference number: 5 (lower is better)
Translates to: WLSHASTVHLTLQNNPLYLMNPY*LAMRSA
Trigger: GGCAGATCGCATAGCCAGCAAGTACGGATTCATCAA...GTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGCATGTGATAGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAACAGAGCATCGTAGTTTaGCATCAGATCTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKQSIVV*HQIWVG
Trigger: ACCCACCCAGATCTGATGCAAAACTACGATGCTCTG...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCACGATTGAAAGTGGAGAGACCCCAGTAGCACTCATGTaGGTCGCAGCTGCCACAGTT +
Preference number: 5 (lower is better)
Translates to: FLSFFLSFFLSTIESGETPVALM*VAAATV
Trigger: AACTGTGGCAGCTGCGACCAACATGAGTGCTACTGG...GGTCTCTCCACTTTCAATCGTGGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTGCGCAGAGAGATCCATaGCAGGTTTTACAAGAAGAG +
Preference number: 5 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPAQRDP*QVLQEE
Trigger: CTCTTCTTGTAAAACCTGCAATGGATCTCTCTGCGC...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAAGCTCACACTACAACTTaGTACACACCTTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKAHTTT*YTPSLF
Trigger: GAAGAGGGAAGGTGTGTACAAAGTTGTAGTGTGAGC...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp AATACAGAGCCAGGAGGGTACAATCATGCCACCCACATTCAATTTCCAGTTTTACCACAGACATTTTTCTaGATATCCTCGTATGATCCA +
Preference number: 5 (lower is better)
Translates to: NTEPGGYNHATHIQFPVLPQTFF*ISSYDP
Trigger: TGGATCATACGAGGATATCAAGAAAAATGTCTGTGG...TAAAACTGGAAATTGAATGTGGGTGGCATGATTGTACCCTCCTGGCTCTGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp GCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACCAGCTGTGTAAAAATCCAATGCATGCCTaGCAGTTCTCACTGCATTTC +
Preference number: 5 (lower is better)
Translates to: ASTVHLTLQNNPLYQLCKNPMHA*QFSLHF
Trigger: GAAATGCAGTGAGAACTGCAAGGCATGCATTGGATT...TTTACACAGCTGGTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp TGGCTATCACATGCTTCTACTGTCCATTTGACTCTTCAGAATAATCCTCTTTACTTGAATCCTGGCCCATaGCATGTCAAACAGCTGTTA +
Preference number: 5 (lower is better)
Translates to: WLSHASTVHLTLQNNPLYLNPGP*HVKQLL
Trigger: TAACAGCTGTTTGACATGCAATGGGCCAGGATTCAA...GTAAAGAGGATTATTCTGAAGAGTCAAATGGACAGTAGAAGCATGTGATAGCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS-3UTR CAA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACAGGTTTGGCAGTGGCCTaGGTCATCAATGTATTCTCC +
Preference number: 5 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTGLAVA*VINVFS
Trigger: GGAGAATACATTGATGACCAAGGCCACTGCCAAACC...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp GAGTGTTCAACAGATCTTAGTTCTTTTAGATTCCTGCATTTAATACCCTTGACATCGAATGGTCTTGATTaGTCGGTCTGTGCTTTCCAC +
Preference number: 5 (lower is better)
Translates to: ECSTDLSSFRFLHLIPLTSNGLD*SVCAFH
Trigger: GTGGAAAGCACAGACCGACAAATCAAGACCATTCGA...TGTCAAGGGTATTAAATGCAGGAATCTAAAAGAACTAAGATCTGTTGAACACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS-3UTR CAA 90 bp ATCAAAGAGGCTCTTAGAAAATCACAAGGGGGAAAGTCTTGGAAACAGTTTCCTCCACAGACATTTTTCTaGATATCCTCGTATGATCCA +
Preference number: 5 (lower is better)
Translates to: IKEALRKSQGGKSWKQFPPQTFF*ISSYDP
Trigger: TGGATCATACGAGGATATCAAGAAAAATGTCTGTGG...AGGAAACTGTTTCCAAGACTTTCCCCCTTGTGATTTTCTAAGAGCCTCTTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp CCGCGAAGCCGCCGGCGATCTTCACTGCCCAGTGGTTaGTGTAGACGCGCGTCCGGCATACCGGGAGCAGAC +
Preference number: 6 (lower is better)
Translates to: PRSRRRSSLPSG*CRRASGIPGAD
Trigger: GTCTGCTCCCGGTATGCCGGACGCGCGTCTACACCAACCACTGGGCAGTGAAGATCGCCGGCGGCTTCGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp GCGATCTGCCTCCGCGAAGCCGCCGGCGATCTTCACTaGCCAGTGGTTGGTGTAGACGCGCGTCCGGCATAC +
Preference number: 6 (lower is better)
Translates to: AICLREAAGDLH*PVVGVDARPAY
Trigger: GTATGCCGGACGCGCGTCTACACCAACCACTGGGCAGTGAAGATCGCCGGCGGCTTCGCGGAGGCAGATCGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp CTGCCAGCTTTTCGTACCGCCCCTTTGCCACAGGTCTaGTTCGAGACTTCCGCCACACGACCGCAGCAGCCC +
Preference number: 6 (lower is better)
Translates to: LPAFRTAPLPQV*FETSATRPQQP
Trigger: GGGCTGCTGCGGTCGTGTGGCGGAAGTCTCGAAGCAGACCTGTGGCAAAGGGGCGGTACGAAAAGCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp CCAGCCAGGTCGGCAGGAGAGGCACTGCATGCTGTGTaGTCCTTCGCAGGTCCTGCAAGAGCTGTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: PARSAGEALHAV*SFAGPARAVAE
Trigger: CTCTGCCACAGCTCTTGCAGGACCTGCGAAGGACCACACAGCATGCAGTGCCTCTCCTGCCGACCTGGCTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp CTCTGGCAGTCGCAGCAGTCCTGGGATCTGCGGGAGTGGGAGGCATaGCAGCAATGGAGGCAGCGGTTGTCGTCCATGTCCAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: LWQSQQSWDLREWEA*QQWRQRLSSMSSSR
Trigger: CCTGCTGCTGGACATGGACGACAACCGCTGCCTCCATTGCTGCAATGCCTCCCACTCCCGCAGATCCCAGGACTGCTGCGACTGCCAGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp TCCTCAGAAGGCCCTGAGCAGCGGGAGCATTTCTTGTaGCACGGCTGGCACCTGTGGGAGCCCTCATCCCAG +
Preference number: 6 (lower is better)
Translates to: SSEGPEQREHFL*HGWHLWEPSSQ
Trigger: CTGGGATGAGGGCTCCCACAGGTGCCAGCCGTGTCACAAGAAATGCTCCCGCTGCTCAGGGCCTTCTGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp CGTCCATGTCCAGCAGCAGGCCAGCTGAGCACCCGGTaGAGTTCTTGCTGCCTGGACCCTTGCATTCCATGC +
Preference number: 6 (lower is better)
Translates to: RPCPAAGQLSTR*SSCCLDPCIPC
Trigger: GCATGGAATGCAAGGGTCCAGGCAGCAAGAACTGCACCGGGTGCTCAGCTGGCCTGCTGCTGGACATGGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp CTGTGGAACTCTGGCAGTCGCAGCAGTCCTGGGATCTaGGGGAGTGGGAGGCATTGCAGCAATGGAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LWNSGSRSSPGI*GSGRHCSNGGS
Trigger: GCTGCCTCCATTGCTGCAATGCCTCCCACTCCCGCAGATCCCAGGACTGCTGCGACTGCCAGAGTTCCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp CACCTGCCCTCATGGAGAAGCAGAGTGTTGTCCGGCTaGCTCAGGCACTGTTGGCAAAGGTCGGCACCGGAG +
Preference number: 6 (lower is better)
Translates to: HLPSWRSRVLSG*LRHCWQRSAPE
Trigger: CTCCGGTGCCGACCTTTGCCAACAGTGCCTGAGCCAGCCGGACAACACTCTGCTTCTCCATGAGGGCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp TCCTGGGATCTGCGGGAGTGGGAGGCATTGCAGCAATaGAGGCAGCGGTTGTCGTCCATGTCCAGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SWDLREWEALQQ*RQRLSSMSSSR
Trigger: CCTGCTGCTGGACATGGACGACAACCGCTGCCTCCATTGCTGCAATGCCTCCCACTCCCGCAGATCCCAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp TCGCAGCAGTCCTGGGATCTGCGGGAGTGGGAGGCATaGCAGCAATGGAGGCAGCGGTTGTCGTCCATGTCC +
Preference number: 6 (lower is better)
Translates to: SQQSWDLREWEA*QQWRQRLSSMS
Trigger: GGACATGGACGACAACCGCTGCCTCCATTGCTGCAATGCCTCCCACTCCCGCAGATCCCAGGACTGCTGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp GCCCTCATGGAGAAGCAGAGTGTTGTCCGGCTGGCTCAGGCACTGTaGGCAAAGGTCGGCACCGGAGCAGGAGACACAGTCCTCGGAACA +
Preference number: 6 (lower is better)
Translates to: ALMEKQSVVRLAQAL*AKVGTGAGDTVLGT
Trigger: TGTTCCGAGGACTGTGTCTCCTGCTCCGGTGCCGACCTTTGCCAACAGTGCCTGAGCCAGCCGGACAACACTCTGCTTCTCCATGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp GCACTTGTCACAAGTGGGGTGGCACCTCTCACAGGTCTGGGCGTGTaGGTCTGCATAGTAGTGCTCAGGGCAAGCGCGGTGGCACTGTCC +
Preference number: 6 (lower is better)
Translates to: ALVTSGVAPLTGLGV*VCIVVLRASAVALS
Trigger: GGACAGTGCCACCGCGCTTGCCCTGAGCACTACTATGCAGACCAACACGCCCAGACCTGTGAGAGGTGCCACCCCACTTGTGACAAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp GTGGGCACGGCTTCATTCCAGTCCTTGCCTTCCACCTaGGGCCAGGTGGACCAGAGACACGTCCCATGCCAT +
Preference number: 6 (lower is better)
Translates to: VGTASFQSLPST*GQVDQRHVPCH
Trigger: ATGGCATGGGACGTGTCTCTGGTCCACCTGGCCTCAGGTGGAAGGCAAGGACTGGAATGAAGCCGTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp CACAGTTGTCTGGGCAGGGTAGGCAGGCGTGTCCCTTaGCAGGATAATGGCCCACAGGGCAGTTCTCCAGAC +
Preference number: 6 (lower is better)
Translates to: HSCLGRVGRRVP*QDNGPQGSSPD
Trigger: GTCTGGAGAACTGCCCTGTGGGCCATTATCCTGCCAAGGGACACGCCTGCCTACCCTGCCCAGACAACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp TCCCTGGCTGGAAGGATGCACTCATCTGTGGAACTCTaGCAGTCGCAGCAGTCCTGGGATCTGCGGGAGTGG +
Preference number: 6 (lower is better)
Translates to: SLAGRMHSSVEL*QSQQSWDLREW
Trigger: CCACTCCCGCAGATCCCAGGACTGCTGCGACTGCCAGAGTTCCACAGATGAGTGCATCCTTCCAGCCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp ACAAGTGGGGTGGCACCTCTCACAGGTCTGGGCGTGTaGGTCTGCATAGTAGTGCTCAGGGCAAGCGCGGTG +
Preference number: 6 (lower is better)
Translates to: TSGVAPLTGLGV*VCIVVLRASAV
Trigger: CACCGCGCTTGCCCTGAGCACTACTATGCAGACCAACACGCCCAGACCTGTGAGAGGTGCCACCCCACTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp CACCTGTGGGAGCCCTCATCCCAGTACTCGACGGCTGCACACTCCTaGGGTGCCGTGCAGACATCATGCACTACTGTGAAGCCTTCCCGA +
Preference number: 6 (lower is better)
Translates to: HLWEPSSQYSTAAHS*GAVQTSCTTVKPSR
Trigger: TCGGGAAGGCTTCACAGTAGTGCATGATGTCTGCACGGCACCCAAGGAGTGTGCAGCCGTCGAGTACTGGGATGAGGGCTCCCACAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp ACTCCTTGGGTGCCGTGCAGACATCATGCACTACTGTaGAGCCTTCCCGACAGGCCAGGCAGGTCCAAGCTG +
Preference number: 6 (lower is better)
Translates to: TPWVPCRHHALL*SLPDRPGRSKL
Trigger: CAGCTTGGACCTGCCTGGCCTGTCGGGAAGGCTTCACAGTAGTGCATGATGTCTGCACGGCACCCAAGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp CCATCCCTGCATTGCAGCAAGCACTCCTTGCCCAGTTaGAACCAGCCAGGTCGGCAGGAGAGGCACTGCATG +
Preference number: 6 (lower is better)
Translates to: PSLHCSKHSLPS*NQPGRQERHCM
Trigger: CATGCAGTGCCTCTCCTGCCGACCTGGCTGGTTTCAACTGGGCAAGGAGTGCTTGCTGCAATGCAGGGATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp GTTGAAAGCGATCCCGACAGTGCAGTGAGAGTTGTTTaGAGTGGCTGCCACTTCTCCGGCACAGCGGGTCCC +
Preference number: 6 (lower is better)
Translates to: VESDPDSAVRVV*SGCHFSGTAGP
Trigger: GGGACCCGCTGTGCCGGAGAAGTGGCAGCCACTGCAAACAACTCTCACTGCACTGTCGGGATCGCTTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp CCCGTGGTACAGGAAGCGCTCCTGACCATGCTTGTCTaGTCTACAGGAGGTGCAGTTGGAAGGGCCACTACC +
Preference number: 6 (lower is better)
Translates to: PVVQEALLTMLV*STGGAVGRATT
Trigger: GGTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCAGACAAGCATGGTCAGGAGCGCTTCCTGTACCACGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp GTTGAAACCAGCCAGGTCGGCAGGAGAGGCACTGCATaGTGTGTGGTCCTTCGCAGGTCCTGCAAGAGCTGT +
Preference number: 6 (lower is better)
Translates to: VETSQVGRRGTA*CVVLRRSCKSC
Trigger: ACAGCTCTTGCAGGACCTGCGAAGGACCACACAGCATGCAGTGCCTCTCCTGCCGACCTGGCTGGTTTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp ACTGGCAGTCTGTGGGCCGTGGACCTCGGCATGACTTaGAGCTCTTGTCACACTTCTCACACCTACCGCTGG +
Preference number: 6 (lower is better)
Translates to: TGSLWAVDLGMT*SSCHTSHTYRW
Trigger: CCAGCGGTAGGTGTGAGAAGTGTGACAAGAGCTGCAAGTCATGCCGAGGTCCACGGCCCACAGACTGCCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp CACTCATCTGTGGAACTCTGGCAGTCGCAGCAGTCCTaGGATCTGCGGGAGTGGGAGGCATTGCAGCAATGG +
Preference number: 6 (lower is better)
Translates to: HSSVELWQSQQS*DLREWEALQQW
Trigger: CCATTGCTGCAATGCCTCCCACTCCCGCAGATCCCAGGACTGCTGCGACTGCCAGAGTTCCACAGATGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp ACTCAGCCTCCCTGGCTGGAAGGATGCACTCATCTGTaGAACTCTGGCAGTCGCAGCAGTCCTGGGATCTGC +
Preference number: 6 (lower is better)
Translates to: TQPPWLEGCTHL*NSGSRSSPGIC
Trigger: GCAGATCCCAGGACTGCTGCGACTGCCAGAGTTCCACAGATGAGTGCATCCTTCCAGCCAGGGAGGCTGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp TCGTGGATGCAGTCCTGGCACCTCTCTGGACAGTGCTaGCAGACTCCTTCCACGGCCACGTGCTTTTCAGGG +
Preference number: 6 (lower is better)
Translates to: SWMQSWHLSGQC*QTPSTATCFSG
Trigger: CCCTGAAAAGCACGTGGCCGTGGAAGGAGTCTGCAAGCACTGTCCAGAGAGGTGCCAGGACTGCATCCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp GACTGGCAGTCTGTGGGCCGTGGACCTCGGCATGACTaGCAGCTCTTGTCACACTTCTCACACCTACCGCTG +
Preference number: 6 (lower is better)
Translates to: DWQSVGRGPRHD*QLLSHFSHLPL
Trigger: CAGCGGTAGGTGTGAGAAGTGTGACAAGAGCTGCAAGTCATGCCGAGGTCCACGGCCCACAGACTGCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp CAGGACAAGCAACTCCACGCCTCCTTTCCGCTGCACTaGTCACAAGTGGGGTGGCACCTCTCACAGGTCTGG +
Preference number: 6 (lower is better)
Translates to: QDKQLHASFPLH*SQVGWHLSQVW
Trigger: CCAGACCTGTGAGAGGTGCCACCCCACTTGTGACAAGTGCAGCGGAAAGGAGGCGTGGAGTTGCTTGTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp GCCACCGGAGAGAAAGAAGCCCTCCTCACACCAGTAGCACTCATGTaGGTCGCAGCTGCCACAGTTAGTACCACAGGCCCTGCATTCCCA +
Preference number: 6 (lower is better)
Translates to: ATGEKEALLTPVALM*VAAATVSTTGPAFP
Trigger: TGGGAATGCAGGGCCTGTGGTACTAACTGTGGCAGCTGCGACCAACATGAGTGCTACTGGTGTGAGGAGGGCTTCTTTCTCTCCGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp TCTGGGACAGGTATAGCACTGGTCCTCAGAAGGCCCTaGGCAGCGGGAGCATTTCTTGTGACACGGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SGTGIALVLRRP*AAGAFLVTRLA
Trigger: TGCCAGCCGTGTCACAAGAAATGCTCCCGCTGCTCAGGGCCTTCTGAGGACCAGTGCTATACCTGTCCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp GCAAGACTGGCAGTCTGTGGGCCGTGGACCTCGGCATaGCTTGCAGCTCTTGTCACACTTCTCACACCTACC +
Preference number: 6 (lower is better)
Translates to: ARLAVCGPWTSA*LAALVTLLTPT
Trigger: GGTAGGTGTGAGAAGTGTGACAAGAGCTGCAAGTCATGCCGAGGTCCACGGCCCACAGACTGCCAGTCTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp TACGTTGATGAATCCGTACTTGCTGGCTATGCGATCTaGCTCCGCGAAGCCGCCGGCGATCTTCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: YVDESVLAGYAI*LREAAGDLHCP
Trigger: TGGGCAGTGAAGATCGCCGGCGGCTTCGCGGAGGCAGATCGCATAGCCAGCAAGTACGGATTCATCAACGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp ATGGCTTTTCAGTGGGCACGGCTTCATTCCAGTCCTTaGCTTCCACCTGAGGCCAGGTGGACCAGAGACACG +
Preference number: 6 (lower is better)
Translates to: MAFQWARLHSSP*LPPEARWTRDT
Trigger: CGTGTCTCTGGTCCACCTGGCCTCAGGTGGAAGGCAAGGACTGGAATGAAGCCGTGCCCACTGAAAAGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp TGGCAGGGCTTGCATTCTCCCAACTCTTGGTCTCCATaGAAGCCAGGGCCACAATCCTGCACACAGCTGCCA +
Preference number: 6 (lower is better)
Translates to: WQGLHSPNSWSP*KPGPQSCTQLP
Trigger: TGGCAGCTGTGTGCAGGATTGTGGCCCTGGCTTCCATGGAGACCAAGAGTTGGGAGAATGCAAGCCCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp ATGCTGTGTGGTCCTTCGCAGGTCCTGCAAGAGCTGTaGCAGAGCACACACTGCTGGCTGTCCTTGTCAGTG +
Preference number: 6 (lower is better)
Translates to: MLCGPSQVLQEL*QSTHCWLSLSV
Trigger: CACTGACAAGGACAGCCAGCAGTGTGTGCTCTGCCACAGCTCTTGCAGGACCTGCGAAGGACCACACAGCAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp AGTGCACCGATCTGTCCTACGTTGATGAATCCGTACTaGCTGGCTATGCGATCTGCCTCCGCGAAGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SAPICPTLMNPY*LAMRSASAKPP
Trigger: CGGCGGCTTCGCGGAGGCAGATCGCATAGCCAGCAAGTACGGATTCATCAACGTAGGACAGATCGGTGCACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 90 bp CCACTCGGCTGTAGCGGAAGCGTTCCACTTTGGGAAACTCGTTGGTaGGGGAGTATGGCTGTACGGACGTGCCATAGAGGACTAAGGACC +
Preference number: 6 (lower is better)
Translates to: PLGCSGSVPLWETRW*GSMAVRTCHRGLRT
Trigger: GGTCCTTAGTCCTCTATGGCACGTCCGTACAGCCATACTCCCCAACCAACGAGTTTCCCAAAGTGGAACGCTTCCGCTACAGCCGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 90 bp GTATCGCAAGACTGGCAGTCTGTGGGCCGTGGACCTCGGCATGACTaGCAGCTCTTGTCACACTTCTCACACCTACCGCTGGTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: VSQDWQSVGRGPRHD*QLLSHFSHLPLVLS
Trigger: AGAAAGCACCAGCGGTAGGTGTGAGAAGTGTGACAAGAGCTGCAAGTCATGCCGAGGTCCACGGCCCACAGACTGCCAGTCTTGCGATAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp CAAGTAGCACAGAAGCGATGGCAGGGCTGGCAGTCGTaGCCATTGAAGAACTGTCCATCCTCGCAGGTGACC +
Preference number: 6 (lower is better)
Translates to: QVAQKRWQGWQS*PLKNCPSSQVT
Trigger: GGTCACCTGCGAGGATGGACAGTTCTTCAATGGTCACGACTGCCAGCCCTGCCATCGCTTCTGTGCTACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp AGCGCTCCTGACCATGCTTGTCTGCTCTACAGGAGGTaGAGTTGGAAGGGCCACTACCTTGGCATCCTTGAC +
Preference number: 6 (lower is better)
Translates to: SAPDHACLLYRR*SWKGHYLGILD
Trigger: GTCAAGGATGCCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCAGACAAGCATGGTCAGGAGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp AGCCAGTGCAATTCTCACAGGCTCGGTGGCAGGGCTTaGATTCTCCCAACTCTTGGTCTCCATGGAAGCCAG +
Preference number: 6 (lower is better)
Translates to: SQCNSHRLGGRA*ILPTLGLHGSQ
Trigger: CTGGCTTCCATGGAGACCAAGAGTTGGGAGAATGCAAGCCCTGCCACCGAGCCTGTGAGAATTGCACTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp CTTGACAGCTGCTGCATTGGTTGTAGCCCGAGCCAGTaGAATTCTCACAGGCTCGGTGGCAGGGCTTGCATT +
Preference number: 6 (lower is better)
Translates to: LDSCCIGCSPSQ*NSHRLGGRACI
Trigger: AATGCAAGCCCTGCCACCGAGCCTGTGAGAATTGCACTGGCTCGGGCTACAACCAATGCAGCAGCTGTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp TTGCATAAAAGCCCTCTGGGCAACTGTGGTAGCACCTaGCCTCATGGAGAAGCAGAGTGTTGTCCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: LHKSPLGNCGST*PHGEAECCPAG
Trigger: GCCAGCCGGACAACACTCTGCTTCTCCATGAGGGCAGGTGCTACCACAGTTGCCCAGAGGGCTTTTATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp GGTCTTCCACTCGGCTGTAGCGGAAGCGTTCCACTTTaGGAAACTCGTTGGTTGGGGAGTATGGCTGTACGG +
Preference number: 6 (lower is better)
Translates to: GLPLGCSGSVPL*ETRWLGSMAVR
Trigger: CCGTACAGCCATACTCCCCAACCAACGAGTTTCCCAAAGTGGAACGCTTCCGCTACAGCCGAGTGGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp TCTGTGGGCCGTGGACCTCGGCATGACTTGCAGCTCTaGTCACACTTCTCACACCTACCGCTGGTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: SVGRGPRHDLQL*SHFSHLPLVLS
Trigger: AGAAAGCACCAGCGGTAGGTGTGAGAAGTGTGACAAGAGCTGCAAGTCATGCCGAGGTCCACGGCCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp AGGAGAGGCACTGATTACCATGGCTGCCAAAGCAGGACTCGCAGTTaGGGGCACACTTCCGGCATCTCTTCTTGTCAGCATGGTAGTGGC +
Preference number: 6 (lower is better)
Translates to: RRGTDYHGCQSRTRS*GHTSGISSCQHGSG
Trigger: GCCACTACCATGCTGACAAGAAGAGATGCCGGAAGTGTGCCCCAAACTGCGAGTCCTGCTTTGGCAGCCATGGTAATCAGTGCCTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 90 bp TCCATAATATCCATCCCTGCATTGCAGCAAGCACTCCTTGCCCAGTaGAAACCAGCCAGGTCGGCAGGAGAGGCACTGCATGCTGTGTGG +
Preference number: 6 (lower is better)
Translates to: SIISIPALQQALLAQ*KPARSAGEALHAVW
Trigger: CCACACAGCATGCAGTGCCTCTCCTGCCGACCTGGCTGGTTTCAACTGGGCAAGGAGTGCTTGCTGCAATGCAGGGATGGATATTATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp ACAGTCTTCCTGAGTTGGTCCCCAGCACTTGGCACATaGGGCTTCACAGGTTTGGCAGTGGCCTTGGTCATC +
Preference number: 6 (lower is better)
Translates to: TVFLSWSPALGT*GFTGLAVALVI
Trigger: GATGACCAAGGCCACTGCCAAACCTGTGAAGCCTCATGTGCCAAGTGCTGGGGACCAACTCAGGAAGACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp AGCGACCATCATCCAAGACCCTTGTTACGGGGCAGCTaGTACAGTCTTCCTGAGTTGGTCCCCAGCACTTGG +
Preference number: 6 (lower is better)
Translates to: SDHHPRPLLRGS*YSLPELVPSTW
Trigger: CCAAGTGCTGGGGACCAACTCAGGAAGACTGTATCAGCTGCCCCGTAACAAGGGTCTTGGATGATGGTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp TTCTCCAGACATTCCCCGTGGTACAGGAAGCGCTCCTaGCCATGCTTGTCTGCTCTACAGGAGGTGCAGTTG +
Preference number: 6 (lower is better)
Translates to: FSRHSPWYRKRS*PCLSALQEVQL
Trigger: CAACTGCACCTCCTGTAGAGCAGACAAGCATGGTCAGGAGCGCTTCCTGTACCACGGGGAATGTCTGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp GTCCTCGTCAAGATAGCTGCTCCTGTAGGAGGAGTATaGCACGGTAGGTTCTGCCAGCTTTTCGTACCGCCC +
Preference number: 6 (lower is better)
Translates to: VLVKIAAPVGGV*HGRFCQLFVPP
Trigger: GGGCGGTACGAAAAGCTGGCAGAACCTACCGTGTCATACTCCTCCTACAGGAGCAGCTATCTTGACGAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp CATAATATCCATCCCTGCATTGCAGCAAGCACTCCTTaGCCAGTTGAAACCAGCCAGGTCGGCAGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: HNIHPCIAASTP*PVETSQVGRRG
Trigger: GCCTCTCCTGCCGACCTGGCTGGTTTCAACTGGGCAAGGAGTGCTTGCTGCAATGCAGGGATGGATATTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp TGTGCTCGTAAAACTCAGCCTCCCTGGCTGGAAGGATaGACTCATCTGTGGAACTCTGGCAGTCGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: CARKTQPPWLEG*THLWNSGSRSS
Trigger: ACTGCTGCGACTGCCAGAGTTCCACAGATGAGTGCATCCTTCCAGCCAGGGAGGCTGAGTTTTACGAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp GGCTGTAGCGGAAGCGTTCCACTTTGGGAAACTCGTTaGTTGGGGAGTATGGCTGTACGGACGTGCCATAGA +
Preference number: 6 (lower is better)
Translates to: GCSGSVPLWETR*LGSMAVRTCHR
Trigger: TCTATGGCACGTCCGTACAGCCATACTCCCCAACCAACGAGTTTCCCAAAGTGGAACGCTTCCGCTACAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 72 bp AGGGACCTGCATAATCTTCAGCACCGTAGTCATCTGTaGGGTCTTCCACTCGGCTGTAGCGGAAGCGTTCCA +
Preference number: 6 (lower is better)
Translates to: RDLHNLQHRSHL*GLPLGCSGSVP
Trigger: TGGAACGCTTCCGCTACAGCCGAGTGGAAGACCCCACAGATGACTACGGTGCTGAAGATTATGCAGGTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp CTCCGGCACAGCGGGTCCCATGCTTGTTCTCATTGCTaGCATCATAACGAGGCATCGGGTCCAAGTCATTCC +
Preference number: 6 (lower is better)
Translates to: LRHSGSHACSHC*HHNEASGPSHS
Trigger: GGAATGACTTGGACCCGATGCCTCGTTATGATGCAAGCAATGAGAACAAGCATGGGACCCGCTGTGCCGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp TGCTCTACAGGAGGTGCAGTTGGAAGGGCCACTACCTaGGCATCCTTGACAAGTGTAGTGGCAGGGATGGCA +
Preference number: 6 (lower is better)
Translates to: CSTGGAVGRATT*ASLTSVVAGMA
Trigger: TGCCATCCCTGCCACTACACTTGTCAAGGATGCCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp GAGAAAGAAGCCCTCCTCACACCAGTAGCACTCATGTaGGTCGCAGCTGCCACAGTTAGTACCACAGGCCCT +
Preference number: 6 (lower is better)
Translates to: EKEALLTPVALM*VAAATVSTTGP
Trigger: AGGGCCTGTGGTACTAACTGTGGCAGCTGCGACCAACATGAGTGCTACTGGTGTGAGGAGGGCTTCTTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp CTTCTCCGGCACAGCGGGTCCCATGCTTGTTCTCATTaGTTGCATCATAACGAGGCATCGGGTCCAAGTCAT +
Preference number: 6 (lower is better)
Translates to: LLRHSGSHACSH*LHHNEASGPSH
Trigger: ATGACTTGGACCCGATGCCTCGTTATGATGCAAGCAATGAGAACAAGCATGGGACCCGCTGTGCCGGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp AGTGATCTGGTCCTGGCCCGTCACATCCAACCTCACTaGATTCAGGGTCACAGGGACCTGCATAATCTTCAG +
Preference number: 6 (lower is better)
Translates to: SDLVLARHIQPH*IQGHRDLHNLQ
Trigger: CTGAAGATTATGCAGGTCCCTGTGACCCTGAATGCAGTGAGGTTGGATGTGACGGGCCAGGACCAGATCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp CCGAACAGCGGGATCCCTGAAGACTTAACCCGCCCTTaGACTCTGTGCAGTTGTGAAATCCAATGCATGCCT +
Preference number: 6 (lower is better)
Translates to: PNSGIPEDLTRP*TLCSCEIQCMP
Trigger: AGGCATGCATTGGATTTCACAACTGCACAGAGTGCAAGGGCGGGTTAAGTCTTCAGGGATCCCGCTGTTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp CATGACATACCCCTCGGTGCAGTTAATACATCCATCTaGTCCGGCCCCAGAGCAAGTAGCACAGAAGCGATG +
Preference number: 6 (lower is better)
Translates to: HDIPLGAVNTSI*SGPRASSTEAM
Trigger: CATCGCTTCTGTGCTACTTGCTCTGGGGCCGGAGCAGATGGATGTATTAACTGCACCGAGGGGTATGTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp ACGTCCCATGCCATAGCTGCAACCCTTCTTGACAGCTaGTGCATTGGTTGTAGCCCGAGCCAGTGCAATTCT +
Preference number: 6 (lower is better)
Translates to: TSHAIAATLLDS*CIGCSPSQCNS
Trigger: AGAATTGCACTGGCTCGGGCTACAACCAATGCAGCAGCTGTCAAGAAGGGTTGCAGCTATGGCATGGGACGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp CTGATTACCATGGCTGCCAAAGCAGGACTCGCAGTTTaGGGCACACTTCCGGCATCTCTTCTTGTCAGCATG +
Preference number: 6 (lower is better)
Translates to: LITMAAKAGLAV*GTLPASLLVSM
Trigger: CATGCTGACAAGAAGAGATGCCGGAAGTGTGCCCCAAACTGCGAGTCCTGCTTTGGCAGCCATGGTAATCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 72 bp CCTGACCATGCTTGTCTGCTCTACAGGAGGTGCAGTTaGAAGGGCCACTACCTTGGCATCCTTGACAAGTGT +
Preference number: 6 (lower is better)
Translates to: PDHACLLYRRCS*KGHYLGILDKC
Trigger: ACACTTGTCAAGGATGCCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCAGACAAGCATGGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp GATGACATAGCCACTCATGCATCGACTGCAGACGTGTaGGTTGTAGCAAAGCTCACAGTTGTCTGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: DDIATHASTADV*VVAKLTVVWAG
Trigger: CCCTGCCCAGACAACTGTGAGCTTTGCTACAACCCACACGTCTGCAGTCGATGCATGAGTGGCTATGTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp ATAACATGCTGCACGTCTCTCCAGGTCAGAAACGGATaGGCTTCTAGGGCCAGGGCAATGATTCCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: ITCCTSLQVRNG*ASRARAMIPAA
Trigger: GGCTGCTGGAATCATTGCCCTGGCCCTAGAAGCCAATCCGTTTCTGACCTGGAGAGACGTGCAGCATGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp CTGTGCTTTCCACACACACGTGCTGCTGAGGAACAGTaGTCCACTTCTCTGCTTCCATCACCATGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: LCFPHTRAAEEQ*STSLLPSPWLR
Trigger: CCGAAGCCATGGTGATGGAAGCAGAGAAGTGGACAACTGTTCCTCAGCAGCACGTGTGTGTGGAAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp TGTAGCGGAAGCGTTCCACTTTGGGAAACTCGTTGGTaGGGGAGTATGGCTGTACGGACGTGCCATAGAGGA +
Preference number: 6 (lower is better)
Translates to: CSGSVPLWETRW*GSMAVRTCHRG
Trigger: TCCTCTATGGCACGTCCGTACAGCCATACTCCCCAACCAACGAGTTTCCCAAAGTGGAACGCTTCCGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp GGAGGTGCAGTTGGAAGGGCCACTACCTTGGCATCCTaGACAAGTGTAGTGGCAGGGATGGCATTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: GGAVGRATTLAS*TSVVAGMALLL
Trigger: AAGAAGCAATGCCATCCCTGCCACTACACTTGTCAAGGATGCCAAGGTAGTGGCCCTTCCAACTGCACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp ACATCCAACCTCACTGCATTCAGGGTCACAGGGACCTaGATAATCTTCAGCACCGTAGTCATCTGTGGGGTC +
Preference number: 6 (lower is better)
Translates to: TSNLTAFRVTGT*IIFSTVVICGV
Trigger: GACCCCACAGATGACTACGGTGCTGAAGATTATGCAGGTCCCTGTGACCCTGAATGCAGTGAGGTTGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp AGCCATATTTACAGGAGAGGCACTGATTACCATGGCTaGCAAAGCAGGACTCGCAGTTTGGGGCACACTTCC +
Preference number: 6 (lower is better)
Translates to: SHIYRRGTDYHG*QSRTRSLGHTS
Trigger: GGAAGTGTGCCCCAAACTGCGAGTCCTGCTTTGGCAGCCATGGTAATCAGTGCCTCTCCTGTAAATATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp AGTCAGGCATGCACTCTTTGCAAGTTTTCTCGTGGATaGAGTCCTGGCACCTCTCTGGACAGTGCTTGCAGA +
Preference number: 6 (lower is better)
Translates to: SQACTLCKFSRG*SPGTSLDSACR
Trigger: TCTGCAAGCACTGTCCAGAGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCATGCCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp CTTTCGTCGATCCTGCAGCAGACTCCTCACCAAAGATaGCTTTTCAGTGGGCACGGCTTCATTCCAGTCCTT +
Preference number: 6 (lower is better)
Translates to: LSSILQQTPHQR*LFSGHGFIPVL
Trigger: AAGGACTGGAATGAAGCCGTGCCCACTGAAAAGCCATCTTTGGTGAGGAGTCTGCTGCAGGATCGACGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp AAGGAACACAGGCCTGCAGCCACAGGTACATACCTGTaGGACATGAAGCGCAGAGAGATCCATTGCAGGTTT +
Preference number: 6 (lower is better)
Translates to: KEHRPAATGTYL*DMKRREIHCRF
Trigger: AAACCTGCAATGGATCTCTCTGCGCTTCATGTCCCACAGGTATGTACCTGTGGCTGCAGGCCTGTGTTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp ATGCACTCTTTGCAAGTTTTCTCGTGGATGCAGTCCTaGCACCTCTCTGGACAGTGCTTGCAGACTCCTTCC +
Preference number: 6 (lower is better)
Translates to: MHSLQVFSWMQS*HLSGQCLQTPS
Trigger: GGAAGGAGTCTGCAAGCACTGTCCAGAGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp AGTAGTGCTCAGGGCAAGCGCGGTGGCACTGTCCCTTaGAGCGTAGGAGAAAGAAAAATGTATCGCAAGACT +
Preference number: 6 (lower is better)
Translates to: SSAQGKRGGTVP*SVGERKMYRKT
Trigger: AGTCTTGCGATACATTTTTCTTTCTCCTACGCTCCAAGGGACAGTGCCACCGCGCTTGCCCTGAGCACTACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp ACTGATTACCATGGCTGCCAAAGCAGGACTCGCAGTTaGGGGCACACTTCCGGCATCTCTTCTTGTCAGCAT +
Preference number: 6 (lower is better)
Translates to: TDYHGCQSRTRS*GHTSGISSCQH
Trigger: ATGCTGACAAGAAGAGATGCCGGAAGTGTGCCCCAAACTGCGAGTCCTGCTTTGGCAGCCATGGTAATCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp CAGCCCATACTTGAACTTCCGGTAGACAGTGCCATCTaGGCCCATATAGACGATGTCGTCCTCATCGTCCTC +
Preference number: 6 (lower is better)
Translates to: QPILELPVDSAI*AHIDDVVLIVL
Trigger: GAGGACGATGAGGACGACATCGTCTATATGGGCCAAGATGGCACTGTCTACCGGAAGTTCAAGTATGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp TTTGTCGGTCTGTGCTTTCCACACACACGTGCTGCTGAGGAACAGTaGTCCACTTCTCTGCTTCCATCACCATGGCTTCGGCATCCATCA +
Preference number: 6 (lower is better)
Translates to: FVGLCFPHTRAAEEQ*STSLLPSPWLRHPS
Trigger: TGATGGATGCCGAAGCCATGGTGATGGAAGCAGAGAAGTGGACAACTGTTCCTCAGCAGCACGTGTGTGTGGAAAGCACAGACCGACAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 90 bp ATGCTTGTCTGCTCTACAGGAGGTGCAGTTGGAAGGGCCACTACCTaGGCATCCTTGACAAGTGTAGTGGCAGGGATGGCATTGCTTCTT +
Preference number: 6 (lower is better)
Translates to: MLVCSTGGAVGRATT*ASLTSVVAGMALLL
Trigger: AAGAAGCAATGCCATCCCTGCCACTACACTTGTCAAGGATGCCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCAGACAAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp CTCATCCAGCAGCCCATACTTGAACTTCCGGTAGACAGTGCCATCTaGGCCCATATAGACGATGTCGTCCTCATCGTCCTCATCGTAGTC +
Preference number: 6 (lower is better)
Translates to: LIQQPILELPVDSAI*AHIDDVVLIVLIVV
Trigger: GACTACGATGAGGACGATGAGGACGACATCGTCTATATGGGCCAAGATGGCACTGTCTACCGGAAGTTCAAGTATGGGCTGCTGGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp GTAGCCTCTCTTCCAGGCTCCTTCGATATTCATGTCTaGCTGGCAAGGATGGGTGTTGTCACTGCAGTGCAT +
Preference number: 6 (lower is better)
Translates to: VASLPGSFDIHV*LARMGVVTAVH
Trigger: ATGCACTGCAGTGACAACACCCATCCTTGCCAGTCAGACATGAATATCGAAGGAGCCTGGAAGAGAGGCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 72 bp CACCATCCAGCATTCTCACACCTCCAATCTTGGCGTTaGAAGCGATCCCGACAGTGCAGTGAGAGTTGTTTG +
Preference number: 6 (lower is better)
Translates to: HHPAFSHLQSWR*KRSRQCSESCL
Trigger: CAAACAACTCTCACTGCACTGTCGGGATCGCTTTCAACGCCAAGATTGGAGGTGTGAGAATGCTGGATGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 72 bp GTAATTGACGTGATGGTTGGGATTATCCGAGCAGCCTaGGGCTTTGTAGATGGAGCGCACTGCACTGTTTGG +
Preference number: 6 (lower is better)
Translates to: VIDVMVGIIRAA*GFVDGAHCTVW
Trigger: CCAAACAGTGCAGTGCGCTCCATCTACAAAGCCTCAGGCTGCTCGGATAATCCCAACCATCACGTCAATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 72 bp ACAGGCCTGCAGCCACAGGTACATACCTGTGGGACATaGAGCGCAGAGAGATCCATTGCAGGTTTTACAAGA +
Preference number: 6 (lower is better)
Translates to: TGLQPQVHTCGT*SAERSIAGFTR
Trigger: TCTTGTAAAACCTGCAATGGATCTCTCTGCGCTTCATGTCCCACAGGTATGTACCTGTGGCTGCAGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp GATGTGCACATGCTGTGGGTTGTAGCTGACAGACTTTaGCTCCACCATGTCAGTGACATCACCATCCAGCAT +
Preference number: 6 (lower is better)
Translates to: DVHMLWVVADRL*LHHVSDITIQH
Trigger: ATGCTGGATGGTGATGTCACTGACATGGTGGAGGCAAAGTCTGTCAGCTACAACCCACAGCATGTGCACATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp AAATGTCCCGCACGGGAAGTCCTGACAATAACATGCTaGACGTCTCTCCAGGTCAGAAACGGATTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: KCPAREVLTITC*TSLQVRNGLAS
Trigger: AGAAGCCAATCCGTTTCTGACCTGGAGAGACGTGCAGCATGTTATTGTCAGGACTTCCCGTGCGGGACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp ACCCGCCCTTGCACTCTGTGCAGTTGTGAAATCCAATaGATGCCTTGCAGTTCTCACTGCATTTCCCACAGA +
Preference number: 6 (lower is better)
Translates to: TRPCTLCSCEIQ*MPCSSHCISHR
Trigger: TCTGTGGGAAATGCAGTGAGAACTGCAAGGCATGCATTGGATTTCACAACTGCACAGAGTGCAAGGGCGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp GGGATCCCTGAAGACTTAACCCGCCCTTGCACTCTGTaGAGTTGTGAAATCCAATGCATGCCTTGCAGTTCT +
Preference number: 6 (lower is better)
Translates to: GIPEDLTRPCTL*SCEIQCMPCSS
Trigger: AGAACTGCAAGGCATGCATTGGATTTCACAACTGCACAGAGTGCAAGGGCGGGTTAAGTCTTCAGGGATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 72 bp CCTCTCTTCCAGGCTCCTTCGATATTCATGTCTGACTaGCAAGGATGGGTGTTGTCACTGCAGTGCATGTAC +
Preference number: 6 (lower is better)
Translates to: PLFQAPSIFMSD*QGWVLSLQCMY
Trigger: GTACATGCACTGCAGTGACAACACCCATCCTTGCCAGTCAGACATGAATATCGAAGGAGCCTGGAAGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 72 bp GCAACTTGCCAGAGCATCGTAGTTTTGCATCAGATCTaGGTGGGTTCTCTCGATGCCGTCATCCAGGATAGT +
Preference number: 6 (lower is better)
Translates to: ATCQSIVVLHQI*VGSLDAVIQDS
Trigger: ACTATCCTGGATGACGGCATCGAGAGAACCCACCCAGATCTGATGCAAAACTACGATGCTCTGGCAAGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 72 bp CAGCACTTGGCACATGAGGCTTCACAGGTTTGGCAGTaGCCTTGGTCATCAATGTATTCTCCATCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: QHLAHEASQVWQ*PWSSMYSPSLQ
Trigger: CTGCAAGGATGGAGAATACATTGATGACCAAGGCCACTGCCAAACCTGTGAAGCCTCATGTGCCAAGTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp CATGTAATATCCTGTAGCACACGAGGTACAGGCTCCTaGATCATCCTCAGTGCATCCCAGACATCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: HVISCSTRGTGS*IILSASQTSFL
Trigger: GAGGAAGGATGTCTGGGATGCACTGAGGATGATCCAGGAGCCTGTACCTCGTGTGCTACAGGATATTACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp TGCTCTACAGGAGGTGCAGTTGGAAGGGCCACTACCTTGGCATCCTaGACAAGTGTAGTGGCAGGGATGGCATTGCTTCTTAAATTCGAA +
Preference number: 6 (lower is better)
Translates to: CSTGGAVGRATTLAS*TSVVAGMALLLKFE
Trigger: TTCGAATTTAAGAAGCAATGCCATCCCTGCCACTACACTTGTCAAGGATGCCAAGGTAGTGGCCCTTCCAACTGCACCTCCTGTAGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp GCTGTTGGATCCACTCCACCTTTGGTTCCATTGAAATaGAACTGTGGGTTCCTCTGCTCGAGAGAACAGACC +
Preference number: 6 (lower is better)
Translates to: AVGSTPPLVPLK*NCGFLCSREQT
Trigger: GGTCTGTTCTCTCGAGCAGAGGAACCCACAGTTTCATTTCAATGGAACCAAAGGTGGAGTGGATCCAACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 72 bp CCACATACTTGGCCACTTGGGATCATTGAAGTAGGTTaGCTGGGCATGGCTGAGGTCATAATCCCTCTTGGT +
Preference number: 6 (lower is better)
Translates to: PHTWPLGIIEVG*LGMAEVIIPLG
Trigger: ACCAAGAGGGATTATGACCTCAGCCATGCCCAGTCAACCTACTTCAATGATCCCAAGTGGCCAAGTATGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 72 bp GACTCTTCCGTAGCATCCTTGCAGATGGCTCCCATCTaGCACGTTCCTAAGTCTAAAAGATATCCACTGGGG +
Preference number: 6 (lower is better)
Translates to: DSSVASLQMAPI*HVPKSKRYPLG
Trigger: CCCCAGTGGATATCTTTTAGACTTAGGAACGTGTCAGATGGGAGCCATCTGCAAGGATGCTACGGAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS GCA 72 bp GGCAGTGGCCTTGGTCATCAATGTATTCTCCATCCTTaGAGATGGCTCCCATCTGACACGTTCCTAAGTCTA +
Preference number: 6 (lower is better)
Translates to: GSGLGHQCILHP*RWLPSDTFLSL
Trigger: TAGACTTAGGAACGTGTCAGATGGGAGCCATCTGCAAGGATGGAGAATACATTGATGACCAAGGCCACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp CAATTTACCTGGAGTCTTGAAGTTCCTCAGCTGAGATaGCGTATCATAAACTTCGAGGACCCAGTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: QFTWSLEVPQLR*RIINFEDPVPS
Trigger: GCTGGGGACTGGGTCCTCGAAGTTTATGATACGCCATCTCAGCTGAGGAACTTCAAGACTCCAGGTAAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 72 bp TCCTCACAGGGCATGCATTCTTCATACTCAGAATCCTaGAATTCACCTTGTCTGCACTCCAGCTTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SSQGMHSSYSES*NSPCLHSSFWQ
Trigger: CTGCCAGAAGCTGGAGTGCAGACAAGGTGAATTCCAGGATTCTGAGTATGAAGAATGCATGCCCTGTGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp GTGTTCACAAACACCATCTTTTGCATAAAAGCCCTCTaGGCAACTGTGGTAGCACCTGCCCTCATGGAGAAG +
Preference number: 6 (lower is better)
Translates to: VFTNTIFCIKAL*ATVVAPALMEK
Trigger: CTTCTCCATGAGGGCAGGTGCTACCACAGTTGCCCAGAGGGCTTTTATGCAAAAGATGGTGTTTGTGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp GGTCTAGGACGAAGTCTCCTTCACAAGAGTTACAGCTaGTGGCATTTCCTTCGCATGTTTTGCAAGGGGAAC +
Preference number: 6 (lower is better)
Translates to: GLGRSLLHKSYS*WHFLRMFCKGN
Trigger: GTTCCCCTTGCAAAACATGCGAAGGAAATGCCACCAGCTGTAACTCTTGTGAAGGAGACTTCGTCCTAGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp GCATCGGGTCCAAGTCATTCCCATTCACATCGCAACTaGCCAGAGCATCGTAGTTTTGCATCAGATCTGGGT +
Preference number: 6 (lower is better)
Translates to: ASGPSHSHSHRN*PEHRSFASDLG
Trigger: ACCCAGATCTGATGCAAAACTACGATGCTCTGGCAAGTTGCGATGTGAATGGGAATGACTTGGACCCGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp CTGGGGCAGCTGGAACAGTTCTTGAATCCTGGCCCATaGCATGTCAAACAGCTGTTATCACATCTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: LGQLEQFLNPGP*HVKQLLSHLLQ
Trigger: CTGCAAGAGATGTGATAACAGCTGTTTGACATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCTGCCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 90 bp CGATGGCACATGTCATTGTATAGAAAGAAGTCAGGCATGCACTCTTaGCAAGTTTTCTCGTGGATGCAGTCCTGGCACCTCTCTGGACAG +
Preference number: 6 (lower is better)
Translates to: RWHMSLYRKKSGMHS*QVFSWMQSWHLSGQ
Trigger: CTGTCCAGAGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCATGCCTGACTTCTTTCTATACAATGACATGTGCCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp TATTCATGTCTGACTGGCAAGGATGGGTGTTGTCACTaGAGTGCATGTACCACATACTTGGCCACTTGGGAT +
Preference number: 6 (lower is better)
Translates to: YSCLTGKDGCCH*SACTTYLATWD
Trigger: ATCCCAAGTGGCCAAGTATGTGGTACATGCACTGCAGTGACAACACCCATCCTTGCCAGTCAGACATGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp GCCCTTGCACTCTGTGCAGTTGTGAAATCCAATGCATaGCTTGCAGTTCTCACTGCATTTCCCACAGACATT +
Preference number: 6 (lower is better)
Translates to: ALALCAVVKSNA*LAVLTAFPTDI
Trigger: AATGTCTGTGGGAAATGCAGTGAGAACTGCAAGGCATGCATTGGATTTCACAACTGCACAGAGTGCAAGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp CCTCAGTGCATCCCAGACATCCTTCCTCACAGGGCATaGATTCTTCATACTCAGAATCCTGGAATTCACCTT +
Preference number: 6 (lower is better)
Translates to: PQCIPDILPHRA*ILHTQNPGIHL
Trigger: AAGGTGAATTCCAGGATTCTGAGTATGAAGAATGCATGCCCTGTGAGGAAGGATGTCTGGGATGCACTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp TTCCCTCTCTGTATTCCCCTACGATACATTCTGGGATaGAGATTCCTTTCAGAAGGTGGTAGCTCCACACAC +
Preference number: 6 (lower is better)
Translates to: FPLCIPLRYILG*RFLSEGGSSTH
Trigger: GTGTGTGGAGCTACCACCTTCTGAAAGGAATCTGCATCCCAGAATGTATCGTAGGGGAATACAGAGAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp ATTGTTCTTTTTCACAAGCATACAGAAGCCTCCTTCTaGCCAGGACTCTTCCGTAGCATCCTTGCAGATGGC +
Preference number: 6 (lower is better)
Translates to: IVLFHKHTEASF*PGLFRSILADG
Trigger: GCCATCTGCAAGGATGCTACGGAAGAGTCCTGGGCAGAAGGAGGCTTCTGTATGCTTGTGAAAAAGAACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000050715.10
CDS CCA 72 bp CTAGGACGAAGTCTCCTTCACAAGAGTTACAGCTGGTaGCATTTCCTTCGCATGTTTTGCAAGGGGAACTAC +
Preference number: 6 (lower is better)
Translates to: LGRSLLHKSYSW*HFLRMFCKGNY
Trigger: GTAGTTCCCCTTGCAAAACATGCGAAGGAAATGCCACCAGCTGTAACTCTTGTGAAGGAGACTTCGTCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp TGCAAGGGGAACTACAGTGTTCACAAACACCATCTTTaGCATAAAAGCCCTCTGGGCAACTGTGGTAGCACC +
Preference number: 6 (lower is better)
Translates to: CKGNYSVHKHHL*HKSPLGNCGST
Trigger: GGTGCTACCACAGTTGCCCAGAGGGCTTTTATGCAAAAGATGGTGTTTGTGAACACTGTAGTTCCCCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp GCCACTACCTTGGCATCCTTGACAAGTGTAGTGGCAGGGATGGCATaGCTTCTTAAATTCGAACTTCCAGGAAGGACAGTTCATAACACA +
Preference number: 6 (lower is better)
Translates to: ATTLASLTSVVAGMA*LLKFELPGRTVHNT
Trigger: TGTGTTATGAACTGTCCTTCCTGGAAGTTCGAATTTAAGAAGCAATGCCATCCCTGCCACTACACTTGTCAAGGATGCCAAGGTAGTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp GAAACTCGTTGGTTGGGGAGTATGGCTGTACGGACGTaGCATAGAGGACTAAGGACCATTCTTTCAATTTAC +
Preference number: 6 (lower is better)
Translates to: ETRWLGSMAVRT*HRGLRTILSIY
Trigger: GTAAATTGAAAGAATGGTCCTTAGTCCTCTATGGCACGTCCGTACAGCCATACTCCCCAACCAACGAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CCA 72 bp ATATCCACTGGGGCAGCTGGAACAGTTCTTGAATCCTaGCCCATTGCATGTCAAACAGCTGTTATCACATCT +
Preference number: 6 (lower is better)
Translates to: ISTGAAGTVLES*PIACQTAVITS
Trigger: AGATGTGATAACAGCTGTTTGACATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCTGCCCCAGTGGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp TTAGAAGTATCAGCACAGACCTTACAGTCATCTTCCTaGGGGCCATTGCACTCCAGACAGTTTTTGTGGCAG +
Preference number: 6 (lower is better)
Translates to: LEVSAQTLQSSS*GPLHSRQFLWQ
Trigger: CTGCCACAAAAACTGTCTGGAGTGCAATGGCCCCAAGGAAGATGACTGTAAGGTCTGTGCTGATACTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp GTTCCTAAGTCTAAAAGATATCCACTGGGGCAGCTGGAACAGTTCTaGAATCCTGGCCCATTGCATGTCAAACAGCTGTTATCACATCTC +
Preference number: 6 (lower is better)
Translates to: VPKSKRYPLGQLEQF*NPGPLHVKQLLSHL
Trigger: GAGATGTGATAACAGCTGTTTGACATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCTGCCCCAGTGGATATCTTTTAGACTTAGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 90 bp AGAAGAGTGACAAGGTTGATTCTGGCTCGTTGCATCTCTTTTGATTaGAACTTTCCACTTTCGTCGATCCTGCAGCAGACTCCTCACCAA +
Preference number: 6 (lower is better)
Translates to: RRVTRLILARCISFD*NFPLSSILQQTPHQ
Trigger: TTGGTGAGGAGTCTGCTGCAGGATCGACGAAAGTGGAAAGTTCAAATCAAAAGAGATGCAACGAGCCAGAATCAACCTTGTCACTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp GTTATCACATCTCTTGCAGGATTTGTAGCCACCCTCTaGAGAGTGGTCCAAGTAGTAGCTCACACTACAACT +
Preference number: 6 (lower is better)
Translates to: VITSLAGFVATL*RVVQVVAHTTT
Trigger: AGTTGTAGTGTGAGCTACTACTTGGACCACTCTTCAGAGGGTGGCTACAAATCCTGCAAGAGATGTGATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS TCA 72 bp CTAAAAGATATCCACTGGGGCAGCTGGAACAGTTCTTaGATCCTGGCCCATTGCATGTCAAACAGCTGTTAT +
Preference number: 6 (lower is better)
Translates to: LKDIHWGSWNSS*ILAHCMSNSCY
Trigger: ATAACAGCTGTTTGACATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCTGCCCCAGTGGATATCTTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp TGTCATTGTATAGAAAGAAGTCAGGCATGCACTCTTTaGAAGTTTTCTCGTGGATGCAGTCCTGGCACCTCT +
Preference number: 6 (lower is better)
Translates to: CHCIERSQACTL*KFSRGCSPGTS
Trigger: AGAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCATGCCTGACTTCTTTCTATACAATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CCA 72 bp GGCCTTGGTCATCAATGTATTCTCCATCCTTGCAGATaGCTCCCATCTGACACGTTCCTAAGTCTAAAAGAT +
Preference number: 6 (lower is better)
Translates to: GLGHQCILHPCR*LPSDTFLSLKD
Trigger: ATCTTTTAGACTTAGGAACGTGTCAGATGGGAGCCATCTGCAAGGATGGAGAATACATTGATGACCAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp TCTAAAAGATATCCACTGGGGCAGCTGGAACAGTTCTaGAATCCTGGCCCATTGCATGTCAAACAGCTGTTA +
Preference number: 6 (lower is better)
Translates to: SKRYPLGQLEQF*NPGPLHVKQLL
Trigger: TAACAGCTGTTTGACATGCAATGGGCCAGGATTCAAGAACTGTTCCAGCTGCCCCAGTGGATATCTTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS CAA 72 bp TTGGCATCCTTGACAAGTGTAGTGGCAGGGATGGCATaGCTTCTTAAATTCGAACTTCCAGGAAGGACAGTT +
Preference number: 6 (lower is better)
Translates to: LASLTSVVAGMA*LLKFELPGRTV
Trigger: AACTGTCCTTCCTGGAAGTTCGAATTTAAGAAGCAATGCCATCCCTGCCACTACACTTGTCAAGGATGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp ATGTCATTGTATAGAAAGAAGTCAGGCATGCACTCTTaGCAAGTTTTCTCGTGGATGCAGTCCTGGCACCTC +
Preference number: 6 (lower is better)
Translates to: MSLYRKKSGMHS*QVFSWMQSWHL
Trigger: GAGGTGCCAGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCATGCCTGACTTCTTTCTATACAATGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp AGTGACAAGGTTGATTCTGGCTCGTTGCATCTCTTTTaGTTTGAACTTTCCACTTTCGTCGATCCTGCAGCA +
Preference number: 6 (lower is better)
Translates to: SDKVDSGSLHLF*FELSTFVDPAA
Trigger: TGCTGCAGGATCGACGAAAGTGGAAAGTTCAAATCAAAAGAGATGCAACGAGCCAGAATCAACCTTGTCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp TGCACTCTGTGCAGTTGTGAAATCCAATGCATGCCTTaGAGTTCTCACTGCATTTCCCACAGACATTTTTCT +
Preference number: 6 (lower is better)
Translates to: CTLCSCEIQCMP*SSHCISHRHFS
Trigger: AGAAAAATGTCTGTGGGAAATGCAGTGAGAACTGCAAGGCATGCATTGGATTTCACAACTGCACAGAGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp AAGAGTTACAGCTGGTGGCATTTCCTTCGCATGTTTTaGAAGGGGAACTACAGTGTTCACAAACACCATCTT +
Preference number: 6 (lower is better)
Translates to: KSYSWWHFLRMF*KGNYSVHKHHL
Trigger: AAGATGGTGTTTGTGAACACTGTAGTTCCCCTTGCAAAACATGCGAAGGAAATGCCACCAGCTGTAACTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS GCA 72 bp GATGGCACATGTCATTGTATAGAAAGAAGTCAGGCATaGACTCTTTGCAAGTTTTCTCGTGGATGCAGTCCT +
Preference number: 6 (lower is better)
Translates to: DGTCHCIERSQA*TLCKFSRGCSP
Trigger: AGGACTGCATCCACGAGAAAACTTGCAAAGAGTGCATGCCTGACTTCTTTCTATACAATGACATGTGCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp ACAAGGTTGATTCTGGCTCGTTGCATCTCTTTTGATTaGAACTTTCCACTTTCGTCGATCCTGCAGCAGACT +
Preference number: 6 (lower is better)
Translates to: TRLILARCISFD*NFPLSSILQQT
Trigger: AGTCTGCTGCAGGATCGACGAAAGTGGAAAGTTCAAATCAAAAGAGATGCAACGAGCCAGAATCAACCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 90 bp AGCGCAGAGAGATCCATTGCAGGTTTTACAAGAAGAGTGACAAGGTaGATTCTGGCTCGTTGCATCTCTTTTGATTTGAACTTTCCACTT +
Preference number: 6 (lower is better)
Translates to: SAERSIAGFTRRVTR*ILARCISFDLNFPL
Trigger: AAGTGGAAAGTTCAAATCAAAAGAGATGCAACGAGCCAGAATCAACCTTGTCACTCTTCTTGTAAAACCTGCAATGGATCTCTCTGCGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS TCA 72 bp TTTTTCTTGATATCCTCGTATGATCCATCAGGGCACTaGGTAACACAGCTGCTAGTTTCTTCATTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: FFLISSYDPSGH*VTQLLVSSFRK
Trigger: CTTCCTGAATGAAGAAACTAGCAGCTGTGTTACTCAGTGCCCTGATGGATCATACGAGGATATCAAGAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000025618.16
ENSMUST00000050715.10
CDS GCA 72 bp TTTACAAGAAGAGTGACAAGGTTGATTCTGGCTCGTTaGATCTCTTTTGATTTGAACTTTCCACTTTCGTCG +
Preference number: 6 (lower is better)
Translates to: FTRRVTRLILAR*ISFDLNFPLSS
Trigger: CGACGAAAGTGGAAAGTTCAAATCAAAAGAGATGCAACGAGCCAGAATCAACCTTGTCACTCTTCTTGTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16
CDS CAA 72 bp AGATCCATTGCAGGTTTTACAAGAAGAGTGACAAGGTaGATTCTGGCTCGTTGCATCTCTTTTGATTTGAAC +
Preference number: 6 (lower is better)
Translates to: RSIAGFTRRVTR*ILARCISFDLN
Trigger: GTTCAAATCAAAAGAGATGCAACGAGCCAGAATCAACCTTGTCACTCTTCTTGTAAAACCTGCAATGGATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025618.16