Pregenerated sensors for PCSK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020131Ensembl transcript IDs: ENSMUST00000020340.15, ENSMUST00000128653.8, ENSMUST00000135071.2
Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTaGGCCGGCCTGGACGCGCGGACCACCAGGTGCTGTAGGTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: TWRPTPLILQSSACS*AGLDARTTRCCRSL Trigger: GAGGGACCTACAGCACCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR GCA 90 bp | TGGCTCACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTaGAGCTGCGCCGGCCTGGACGCGCGGACCACCAGGTGCTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: WLTWRPTPLILQSSA*SCAGLDARTTRCCR Trigger: CCTACAGCACCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTGAGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR CCA 90 bp | CCCTCTGTGTCCCTCTGCACACATGCGCGCGCGCGGCTGGTCACCTaGGGGGCCTGGGGCCGTGCTGTCATGTCCTCGGCCGTCCCATAC | + |
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Preference number: 1 (lower is better) Translates to: PSVSLCTHARARLVT*GAWGRAVMSSAVPY Trigger: GTATGGGACGGCCGAGGACATGACAGCACGGCCCCAGGCCCCCCAGGTGACCAGCCGCGCGCGCGCATGTGTGCAGAGGGACACAGAGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR CCA 90 bp | GGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTaGCCAGCAGAGCCAGCACCATGGCCCAAGACTGGTAGCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: GAGGPSSSRGASQRP*PAEPAPWPKTGSWG Trigger: CCCCCAGCTACCAGTCTTGGGCCATGGTGCTGGCTCTGCTGGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
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| 3UTR TCA 90 bp | GCAGCCCATAGCCATAATGGTGGCTCACTTGGCGCCCCACGCCGTTaGTCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCCTGGACGCGC | + |
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Preference number: 1 (lower is better) Translates to: AAHSHNGGSLGAPRR*SSSPPPAAAPAWTR Trigger: GCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTGAGCCACCATTATGGCTATGGGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR TCA 90 bp | CTGCACGTGCTCGAGCGAGCGGATGAGGCGGCGGCGCGAGCCATCTaGGCACGCGGTCACGTTCTTCGGCACCAGCATCCGAGGCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: LHVLERADEAAARAI*ARGHVLRHQHPRQD Trigger: ATCCTGCCTCGGATGCTGGTGCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAGCACGTGCAG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR CCA 90 bp | AGGCCCTGGCCAGCAGAGCCAGCACCATGGCCCAAGACTGGTAGCTaGGGGGCCACCAGAGGTGGCAAGCCTTGGAGGGGCTCTGGAGCT | + |
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Preference number: 1 (lower is better) Translates to: RPWPAEPAPWPKTGS*GATRGGKPWRGSGA Trigger: AGCTCCAGAGCCCCTCCAAGGCTTGCCACCTCTGGTGGCCCCCCAGCTACCAGTCTTGGGCCATGGTGCTGGCTCTGCTGGCCAGGGCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
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| 3UTR TCA 90 bp | TGTAGGAGAGCGAAAGCTGGACCTGCACGTGCTCGAGCGAGCGGATaGGGCGGCGGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCG | + |
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Preference number: 1 (lower is better) Translates to: CRRAKAGPARARASG*GGGASHLSTRSRSS Trigger: CGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCTTTCGCTCTCCTACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR GCA 90 bp | GAGCAGCTGAGGCTGAGCGGTGGGCTGTCACCTGACCCATGCAGCTaGTCTGCCCTGGCCTTCTGGGGCAGGCTTCTCTTCCAGCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: EQLRLSGGLSPDPCS*SALAFWGRLLFQPE Trigger: CTCAGGCTGGAAGAGAAGCCTGCCCCAGAAGGCCAGGGCAGAGCAGCTGCATGGGTCAGGTGACAGCCCACCGCTCAGCCTCAGCTGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
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| 3UTR CCA 90 bp | AACAGGAGGGTGACAGCTGGCCTGTCCTTCGGTCACTGGCTGCTGTaGGTGGCTGTAGAGCCACCACCACTGCTGGCTGGAGATGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: NRRVTAGLSFGHWLL*VAVEPPPLLAGDEA Trigger: TGCCTCATCTCCAGCCAGCAGTGGTGGTGGCTCTACAGCCACCCACAGCAGCCAGTGACCGAAGGACAGGCCAGCTGTCACCCTCCTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR CCA 90 bp | AGCAGGTGTAACAGGAGGGTGACAGCTGGCCTGTCCTTCGGTCACTaGCTGCTGTGGGTGGCTGTAGAGCCACCACCACTGCTGGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SRCNRRVTAGLSFGH*LLWVAVEPPPLLAG Trigger: TCCAGCCAGCAGTGGTGGTGGCTCTACAGCCACCCACAGCAGCCAGTGACCGAAGGACAGGCCAGCTGTCACCCTCCTGTTACACCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR TCA 90 bp | GCTGCTGTGGGTGGCTGTAGAGCCACCACCACTGCTGGCTGGAGATaGGGCAGAGTCCTGCCAGGATGGAGAGGGGACTGTGACTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: AAVGGCRATTTAGWR*GRVLPGWRGDCDFP Trigger: AGGAAAGTCACAGTCCCCTCTCCATCCTGGCAGGACTCTGCCTCATCTCCAGCCAGCAGTGGTGGTGGCTCTACAGCCACCCACAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR GCA 90 bp | ACACAAGGGACAGGGGACAGGCAGTGTAGTCGCTGCTCAGGCTGCTaGAGCAGGTGTAACAGGAGGGTGACAGCTGGCCTGTCCTTCGGT | + |
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Preference number: 1 (lower is better) Translates to: TQGTGDRQCSRCSGC*SRCNRRVTAGLSFG Trigger: ACCGAAGGACAGGCCAGCTGTCACCCTCCTGTTACACCTGCTGCAGCAGCCTGAGCAGCGACTACACTGCCTGTCCCCTGTCCCTTGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR CCA 90 bp | GTGCTTGTCGGTGCACTGGTGGTGCAGGTCCGTGGTGACGATCTGTaGGTCGGTGACCACACCGCTGCTGAAGGTGGTGGTAAACGTGGA | + |
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Preference number: 1 (lower is better) Translates to: VLVGALVVQVRGDDL*VGDHTAAEGGGKRG Trigger: TCCACGTTTACCACCACCTTCAGCAGCGGTGTGGTCACCGACCCACAGATCGTCACCACGGACCTGCACCACCAGTGCACCGACAAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR CCA 90 bp | ACATGGGGCTATGGATGGCTTGGAGACAGGGAAGGGGCAGATGATTaGTGGCTGTGGTCTGACCTCTTGCCCACTGTACCTGCTCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: TWGYGWLGDREGADD*WLWSDLLPTVPAPK Trigger: TTTTGGAGCAGGTACAGTGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCATCCATAGCCCCATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
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| 3UTR-3UTR GCA 90 bp | TCCGCCTGCAGCTGCGCCGGCCTGGACGCGCGGACCACCAGGTGCTGTAGGTCCCTCCAGTCCTCCGCCTaGAGCTGCGCCGGCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: SACSCAGLDARTTRCCRSLQSSA*SCAGLD Trigger: GTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAG...GGACCTACAGCACCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGA 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | ACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCCTGGACGCGCGGAGGTCAGGAGCGGGTTaGCCTCCAGGGCCAGGGCGA | + |
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Preference number: 2 (lower is better) Translates to: TPLILQSSACSCAGLDARRSGAG*PPGPGR Trigger: TCGCCCTGGCCCTGGAGGCCAACCCGCTCCTGACCT...CCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGGACCTGCACGTGCTCGAGCGAGCGGATGAGGCGGCGGCGCGAGCCATCGCAGCTGCGCCGGCCTaGACGCGCGGACCACCAGGT | + |
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Preference number: 2 (lower is better) Translates to: KLDLHVLERADEAAARAIAAAPA*TRGPPG Trigger: ACCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGC...GATGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCTT 72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR GCA 90 bp | ACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCCTGGACGCGCGGCAGGTCCGTCCACCGTaGGACCATCATCCTCCGGGC | + |
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Preference number: 2 (lower is better) Translates to: TPLILQSSACSCAGLDARQVRPP*DHHPPG Trigger: GCCCGGAGGATGATGGTCGCACGGTGGACGGACCTG...CCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCCTGGACGCGCGGACCGAGGCAGGATGGGGGTaGGGGTGTGCACCACCCGAA | + |
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Preference number: 2 (lower is better) Translates to: PLILQSSACSCAGLDARTEAGWG*GCAPPE Trigger: TTCGGGTGGTGCACACCCCCACCCCCATCCTGCCTC...GGTCCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | CCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCCTGGACGCGCGGACCGCATCCGAGGCAGGATaGGGGTGGGGGTGTGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: PLILQSSACSCAGLDARTASEAG*GWGCAP Trigger: TGGTGCACACCCCCACCCCCATCCTGCCTCGGATGC...GGTCCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR GCA 90 bp | GCCGGCCTGGACGCGCGGACCACCAGGTGCTGTAGGTCCCTCCAGGTCAGGAGCGCCGAGGTGCCCGTGTaGTTGTCGGTGCACTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: AGLDARTTRCCRSLQVRSAEVPV*LSVHWW Trigger: CCACCAGTGCACCGACAAGCACACGGGCACCTCGGC...GCTCCTGACCTGGAGGGACCTACAGCACCTGGTGGTCCGCGCGTCCAGGCCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGAGGCTTAGTGGGCAGCCACACGCGAGCCAGGTCCACCAGCAACCCCGCGCAGCTGCGCCGGCCTaGACGCGCGGACCACCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LLRLSGQPHASQVHQQPRAAAPA*TRGPPG Trigger: ACCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGC...GCGGGGTTGCTGGTGGACCTGGCTCGCGTGTGGCTGCCCACTAAGCCTCAGAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGGCATCCGAGGCAGGATaGGGGTGGGGGTGTGCACCA | + |
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Preference number: 2 (lower is better) Translates to: HLAPHAVDPPVLRLQLRRASEAG*GWGCAP Trigger: TGGTGCACACCCCCACCCCCATCCTGCCTCGGATGC...CCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGGACGCGCGGACCACCAGGTGCTGTAGGTCCCTCCAGGTCAGGAGCGGGTGCGCGGACCACCAGGTaGTGTAGGTCCCTCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: AWTRGPPGAVGPSRSGAGARTTR*CRSLQV Trigger: GACCTGGAGGGACCTACAGCACCTGGTGGTCCGCGC...ACCCGCTCCTGACCTGGAGGGACCTACAGCACCTGGTGGTCCGCGCGTCCAGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGGACCTGCACGTGCTCGAGCGAGCGGATGAGGCGGCGGCGCGAGCCATCCTCGACCCTGCCGCGTaGTGCTGCCCACTGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: KLDLHVLERADEAAARAILDPAA*CCPLTV Trigger: CACTGTCAGTGGGCAGCACCACGCGGCAGGGTCGAG...GATGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGTGAGGAAGATCTCCAGGTCCCCGCGGCGGCTGTAGGAGAGCGAAAGCTGGGCGCCCCACGCCGTTaGTCCTCCAGTCCTCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: AGEEDLQVPAAAVGERKLGAPRR*SSSPPP Trigger: AGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCC...CAGCTTTCGCTCTCCTACAGCCGCCGCGGGGACCTGGAGATCTTCCTCACCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | GCCGGCCTGGACGCGCGGACCACCAGGTGCTGTAGGTCCCTCCAGGTCAGGAGCTTGTCGGTGCACTGGTaGTGCAGGTCCGTGGTGACG | + |
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Preference number: 2 (lower is better) Translates to: AGLDARTTRCCRSLQVRSLSVHW*CRSVVT Trigger: CGTCACCACGGACCTGCACCACCAGTGCACCGACAA...GCTCCTGACCTGGAGGGACCTACAGCACCTGGTGGTCCGCGCGTCCAGGCCGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGTTCCCGAGGCCCAGATaGACAGTGTACCCAGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: HLAPHAVDPPVLRLQLRRFPRPR*TVYPAL Trigger: AAGGGCTGGGTACACTGTTCATCTGGGCCTCGGGAA...CCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135071.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGCCTGCAGCTGCGCCGGCCTGGACGCGCGGACCACCAGGTGCTGTAGGTCCCCAGGGATCTGTGCATaGATGGTTTTGGGCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: SACSCAGLDARTTRCCRSPGICA*MVLGTG Trigger: CCCAGTGCCCAAAACCATGCATGCACAGATCCCTGG...GGACCTACAGCACCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR-3UTR GCA 90 bp | GGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCGGCACCAGCATCCGAGGCAGCGCGGACCACCAGGTaGTGTAGGTCCCTCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GASHLSTRSRSSAPASEAARTTR*CRSLQV Trigger: GACCTGGAGGGACCTACAGCACCTGGTGGTCCGCGC...TGCCTCGGATGCTGGTGCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGAGGCTTAGTGGGCAGCCACACGCGAGCCAGGTCCACCAGCAACCCCGCGCCTCCCAAAGGCCCTaGCCAGCAGAGCCAGCACCA | + |
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Preference number: 2 (lower is better) Translates to: LLRLSGQPHASQVHQQPRASQRP*PAEPAP Trigger: TGGTGCTGGCTCTGCTGGCCAGGGCCTTTGGGAGGC...GCGGGGTTGCTGGTGGACCTGGCTCGCGTGTGGCTGCCCACTAAGCCTCAGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGACGCGCGGACCACCAGGTGCTGTAGGTCCCTCCAGGTCAGGAGCGGGTTTGTCGGTGCACTGGTaGTGCAGGTCCGTGGTGACG | + |
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Preference number: 2 (lower is better) Translates to: AWTRGPPGAVGPSRSGAGLSVHW*CRSVVT Trigger: CGTCACCACGGACCTGCACCACCAGTGCACCGACAA...ACCCGCTCCTGACCTGGAGGGACCTACAGCACCTGGTGGTCCGCGCGTCCAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGCCCCTCTGTGTCCCTCTGCACACATGCGCGCGCGCGGCTGGTCACCTGGGCTTCTCTTCCAGCCTaGGAGCAGGACCTTGGGGTA | + |
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Preference number: 2 (lower is better) Translates to: HSPSVSLCTHARARLVTWASLPA*EQDLGV Trigger: TACCCCAAGGTCCTGCTCTCAGGCTGGAAGAGAAGC...CCAGGTGACCAGCCGCGCGCGCGCATGTGTGCAGAGGGACACAGAGGGGCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCACTGGTGGTGCAGGTCCGTGGTGACGATCTGTGGGTCGGTGACCACACCGGTTGCGGCTGCAGGCTaGGGGACTGAGCCTCCACGA | + |
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Preference number: 2 (lower is better) Translates to: VHWWCRSVVTICGSVTTPVAAAG*GTEPPR Trigger: TCGTGGAGGCTCAGTCCCTCAGCCTGCAGCCGCAAC...CGGTGTGGTCACCGACCCACAGATCGTCACCACGGACCTGCACCACCAGTGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135071.2 |
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| 3UTR-3UTR GCA 90 bp | CCATCTGAGCACGCGGTCACGTTCTTCGGCACCAGCATCCGAGGCAGGATGGGGAGCCAGCGGGGCAGATaGCGAGGTGCCCGTGTGCTT | + |
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Preference number: 2 (lower is better) Translates to: PSEHAVTFFGTSIRGRMGSQRGR*RGARVL Trigger: AAGCACACGGGCACCTCGGCATCTGCCCCGCTGGCT...CCCCATCCTGCCTCGGATGCTGGTGCCGAAGAACGTGACCGCGTGCTCAGATGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCACGCGGTCACGTTCTTCGGCACCAGCATCCGAGGCAGGATGGGGGTGGCTGGGGTATCTAGCCTaGGGCAGGTGGGCCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LSTRSRSSAPASEAGWGWLGYLA*GRWAFL Trigger: GAGGAAGGCCCACCTGCCCCAGGCTAGATACCCCAG...CCACCCCCATCCTGCCTCGGATGCTGGTGCCGAAGAACGTGACCGCGTGCTCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTGAGGAAGATCTCCAGGTCCCCGCGGCGGCTGTAGGAGAGCGAAAGCTGGAGGCAGGATGGGGGTaGGGGTGTGCACCACCCGAA | + |
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Preference number: 2 (lower is better) Translates to: AGEEDLQVPAAAVGERKLEAGWG*GCAPPE Trigger: TTCGGGTGGTGCACACCCCCACCCCCATCCTGCCTC...CAGCTTTCGCTCTCCTACAGCCGCCGCGGGGACCTGGAGATCTTCCTCACCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR GCA 90 bp | CGTGTGCTTGTCGGTGCACTGGTGGTGCAGGTCCGTGGTGACGATCTGTGGGTCGCCGAGGTGCCCGTGTaGTTGTCGGTGCACTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RVLVGALVVQVRGDDLWVAEVPV*LSVHWW Trigger: CCACCAGTGCACCGACAAGCACACGGGCACCTCGGC...GACCCACAGATCGTCACCACGGACCTGCACCACCAGTGCACCGACAAGCACACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR CAA 90 bp | CTGGCCTTCTGGGGCAGGCTTCTCTTCCAGCCTGAGAGCAGGACCTaGGGGTACCGGCCTTCTGTCCTGACAGCCAGGCATCTCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LAFWGRLLFQPESRT*GYRPSVLTARHLWL Trigger: GAGCCAGAGATGCCTGGCTGTCAGGACAGAAGGCCGGTACCCCAAGGTCCTGCTCTCAGGCTGGAAGAGAAGCCTGCCCCAGAAGGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
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| 3UTR-3UTR GCA 90 bp | AATGGCACATTTCTTCTGAGGCTTAGTGGGCAGCCACACGCGAGCCAGGTCCACCTCCAGTCCTCCGCCTaGAGCTGCGCCGGCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: NGTFLLRLSGQPHASQVHLQSSA*SCAGLD Trigger: GTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAG...GTGGACCTGGCTCGCGTGTGGCTGCCCACTAAGCCTCAGAAGAAATGTGCCATT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCACTGGTGGTGCAGGTCCGTGGTGACGATCTGTGGGTCGGTGACCACACCGGCCTTGGAGGGGCTCTaGAGCTCTCCCAACACAAGG | + |
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Preference number: 2 (lower is better) Translates to: VHWWCRSVVTICGSVTTPALEGL*SSPNTR Trigger: CCTTGTGTTGGGAGAGCTCCAGAGCCCCTCCAAGGC...CGGTGTGGTCACCGACCCACAGATCGTCACCACGGACCTGCACCACCAGTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCTGAGCACGCGGTCACGTTCTTCGGCACCAGCATCCGAGGCAGGATGGGGAGAGGTGGCAAGCCTTaGAGGGGCTCTGGAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: PSEHAVTFFGTSIRGRMGRGGKP*RGSGAL Trigger: GAGAGCTCCAGAGCCCCTCCAAGGCTTGCCACCTCT...CCCCATCCTGCCTCGGATGCTGGTGCCGAAGAACGTGACCGCGTGCTCAGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| 3UTR CAA 90 bp | TTTCCCGAGGCCCAGATGAACAGTGTACCCAGCCCTTGGCGGCCCTaGGTTACACCACGCCTGAAGGCCTCCTGTGTGAGGAGGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: FPEAQMNSVPSPWRP*VTPRLKASCVRRPG Trigger: ACCTGGCCTCCTCACACAGGAGGCCTTCAGGCGTGGTGTAACCAAGGGCCGCCAAGGGCTGGGTACACTGTTCATCTGGGCCTCGGGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135071.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGCCCGTGTGCTTGTCGGTGCACTGGTGGTGCAGGTCCGTGGTGACGATCTGCGTGGTGCTGCCCACTaGCAGTGTGTGGATGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: GARVLVGALVVQVRGDDLRGAAH*QCVDAV Trigger: AACAGCATCCACACACTGTCAGTGGGCAGCACCACG...CAGATCGTCACCACGGACCTGCACCACCAGTGCACCGACAAGCACACGGGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCTCCAGGGATCTGTGCATGCATGGTTTTGGGCACTGGGGTATCTAGCCTGCAGGGCACTCGACCCTaGCGCGTGGTGCTGCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: QPPGICACMVLGTGVSSLQGTRP*RVVLPT Trigger: AGTGGGCAGCACCACGCGGCAGGGTCGAGTGCCCTG...CAGGCTAGATACCCCAGTGCCCAAAACCATGCATGCACAGATCCCTGGAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAATGGTGGCTCACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGATGGGGGTGGGGGTGTaGACCACCCGAATGGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: IMVAHLAPHAVDPPVLRLMGVGV*TTRMAH Trigger: ATGTGCCATTCGGGTGGTGCACACCCCCACCCCCAT...CAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTGAGCCACCATTAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCACTGTACCTGGGGGCCACCAGAGGTaGCAAGCCTTGGAGGGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: REGADDWWLWSDLLPTVPGGHQR*QALEGL Trigger: GAGCCCCTCCAAGGCTTGCCACCTCTGGTGGCCCCC...AGGTACAGTGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCTGAGGCTTAGTGGGCAGCCACACGCGAGCCAGGTCCACCAGCAACCCCGCGAAGGGGCAGATGATTaGTGGCTGTGGTCTGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLRLSGQPHASQVHQQPREGADD*WLWSDL Trigger: GAGGTCAGACCACAGCCACCAATCATCTGCCCCTTC...GCGGGGTTGCTGGTGGACCTGGCTCGCGTGTGGCTGCCCACTAAGCCTCAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCGGCACCAGCATCCGAGGCAACATGGGGCTATGGATaGCTTGGAGACAGGGAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GASHLSTRSRSSAPASEATWGYG*LGDREG Trigger: CCCTTCCCTGTCTCCAAGCCATCCATAGCCCCATGT...TGCCTCGGATGCTGGTGCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTGGTGACGATCTGTGGGTCGGTGACCACACCGCTGCTGAAGGTGGTGGTAAACTCGACCCTGCCGCGTaGTGCTGCCCACTGACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: RGDDLWVGDHTAAEGGGKLDPAA*CCPLTV Trigger: CACTGTCAGTGGGCAGCACCACGCGGCAGGGTCGAG...TTTACCACCACCTTCAGCAGCGGTGTGGTCACCGACCCACAGATCGTCACCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCGTGCTGTCATGTCCTCGGCCGTCCCATACAGCAGCAGGGTGTAGTAGTACAAGCTGGACCTGCACGTaGTCGAGCGAGCGGATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: AVLSCPRPSHTAAGCSSTSWTCT*SSERMR Trigger: CCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCT...TGTACTACTACACCCTGCTGCTGTATGGGACGGCCGAGGACATGACAGCACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCTCCAGGGATCTGTGCATGCATGGTTTTGGGCACTGGGGTATCTAGCCTGGCCTCCCAAAGGCCCTaGCCAGCAGAGCCAGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: QPPGICACMVLGTGVSSLASQRP*PAEPAP Trigger: TGGTGCTGGCTCTGCTGGCCAGGGCCTTTGGGAGGC...CAGGCTAGATACCCCAGTGCCCAAAACCATGCATGCACAGATCCCTGGAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCACTGTACCTCTAGCCTGGGGCAGGTaGGCCTTCCTCAAGCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: REGADDWWLWSDLLPTVPLAWGR*AFLKPR Trigger: CCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAG...AGGTACAGTGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGCGGCGGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCGGCACCAGCATCGGATCTGTGCATGCATaGTTTTGGGCACTGGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: RRRREPSEHAVTFFGTSIGSVHA*FWALGY Trigger: ATACCCCAGTGCCCAAAACCATGCATGCACAGATCC...GATGCTGGTGCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR CAA 90 bp | GCATCTCTGGCTCTCCAGCCTCCAGGGATCTGTGCATGCATGGTTTaGGGCACTGGGGTATCTAGCCTGGGGCAGGTGGGCCTTCCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ASLALQPPGICACMV*GTGVSSLGQVGLPQ Trigger: TTGAGGAAGGCCCACCTGCCCCAGGCTAGATACCCCAGTGCCCAAAACCATGCATGCACAGATCCCTGGAGGCTGGAGAGCCAGAGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCACTGTACCTACCGGCCTTCTGTCCTaGCAGCCAGGCATCTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: REGADDWWLWSDLLPTVPTGLLS*QPGISG Trigger: GCCAGAGATGCCTGGCTGTCAGGACAGAAGGCCGGT...AGGTACAGTGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCTCCAGGGATCTGTGCATGCATGGTTTTGGGCACTGGGGTATCTAGCCTGAGCTGGACCTGCACGTaGTCGAGCGAGCGGATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: QPPGICACMVLGTGVSSLSWTCT*SSERMR Trigger: CCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCT...CAGGCTAGATACCCCAGTGCCCAAAACCATGCATGCACAGATCCCTGGAGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAATGGTGGCTCACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCTGACAGTGTGTGGATaGTGTTGGTGTAGCCGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: IMVAHLAPHAVDPPVLRLLTVCG*CWCSRH Trigger: GTGACGGCTACACCAACAGCATCCACACACTGTCAG...CAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTGAGCCACCATTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135071.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCTCCAGGGATCTGTGCATGCATGGTTTTGGGCACTGGGGTATCTAGCCTGGCCTTGGAGGGGCTCTaGAGCTCTCCCAACACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: QPPGICACMVLGTGVSSLALEGL*SSPNTR Trigger: CCTTGTGTTGGGAGAGCTCCAGAGCCCCTCCAAGGC...CAGGCTAGATACCCCAGTGCCCAAAACCATGCATGCACAGATCCCTGGAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCAAGAGGTGGCAAGCCTTaGAGGGGCTCTGGAGCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LETGKGQMIGGCGLTSCPRGGKP*RGSGAL Trigger: GAGAGCTCCAGAGCCCCTCCAAGGCTTGCCACCTCT...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCAGCAGAGCCAGCACCATaGCCCAAGACTGGTAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LETGKGQMIGGCGLTSCPAEPAP*PKTGSW Trigger: CCAGCTACCAGTCTTGGGCCATGGTGCTGGCTCTGC...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGTGGACATGAAGATCCAGTTGTTGTAGCCTTGGCCGCTGATATCCAACGGAGGTCAGGAGCGGGTTaGCCTCCAGGGCCAGGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: VSGHEDPVVVALAADIQRRSGAG*PPGPGR Trigger: TCGCCCTGGCCCTGGAGGCCAACCCGCTCCTGACCT...CCGTTGGATATCAGCGGCCAAGGCTACAACAACTGGATCTTCATGTCCACTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCATGTCCTCGGCCGTCCCATACAGCAGCAGGGTGTAGTAGTACAGAGTTCCTGCTTGTCGGTGCACTaGTGGTGCAGGTCCGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: CHVLGRPIQQQGVVVQSSCLSVH*WCRSVV Trigger: CACCACGGACCTGCACCACCAGTGCACCGACAAGCA...GGAACTCTGTACTACTACACCCTGCTGCTGTATGGGACGGCCGAGGACATGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGACGGTGGGCTGTCACCTaGCCCATGCAGCTGCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGRWAVT*PMQLLC Trigger: GCAGAGCAGCTGCATGGGTCAGGTGACAGCCCACCG...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTCATGTCCTCGGCCGTCCCATACAGCAGCAGGGTGTAGTAGTACAGAGTTCCTTGGTGGCTGTGGTCTaGCCTCTTGCCCACTGTACC | + |
|
Preference number: 2 (lower is better) Translates to: CHVLGRPIQQQGVVVQSSLVAVV*PLAHCT Trigger: GGTACAGTGGGCAAGAGGTCAGACCACAGCCACCAA...GGAACTCTGTACTACTACACCCTGCTGCTGTATGGGACGGCCGAGGACATGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCACCAGGGATCTGTGCATaGATGGTTTTGGGCACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: LETGKGQMIGGCGLTSCPPGICA*MVLGTG Trigger: CCCAGTGCCCAAAACCATGCATGCACAGATCCCTGG...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCAGAAGGGGCAGATGATTaGTGGCTGTGGTCTGACCTC | + |
|
Preference number: 2 (lower is better) Translates to: LETGKGQMIGGCGLTSCPEGADD*WLWSDL Trigger: GAGGTCAGACCACAGCCACCAATCATCTGCCCCTTC...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR CAA 90 bp | CTCATCCCAGTAGTGAGTGGACATGAAGATCCAGTTGTTGTAGCCTaGGCCGCTGATATCCAACGGTCTGATGGCCACGAGCGTGGAGCG | + |
|
Preference number: 2 (lower is better) Translates to: LIPVVSGHEDPVVVA*AADIQRSDGHERGA Trigger: CGCTCCACGCTCGTGGCCATCAGACCGTTGGATATCAGCGGCCAAGGCTACAACAACTGGATCTTCATGTCCACTCACTACTGGGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTGTAGTAGTACAGAGTTCCTGTGTTAAAATAGTAGCCCTTATTCTCCAGGCCGGCGCCCCACGCCGTTaGTCCTCCAGTCCTCCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: GVVVQSSCVKIVALILQAGAPRR*SSSPPP Trigger: AGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCC...GGCCTGGAGAATAAGGGCTACTATTTTAACACAGGAACTCTGTACTACTACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCATGTGGTCTGACCTCTTaGCCACTGTACCTGCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LETGKGQMIGGCGLTSCPCGLTS*PLYLLQ Trigger: TTGGAGCAGGTACAGTGGGCAAGAGGTCAGACCACA...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACACGGTGGGCTGTCACCTaGCCCATGCAGCTGCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLFGNYEVRHGAMDGLETRWAVT*PMQLLC Trigger: GCAGAGCAGCTGCATGGGTCAGGTGACAGCCCACCG...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGTAGTGAGTGGACATGAAGATCCAGTTGTTGTAGCCTTGGCCGCTGATATCCGTGGTGCTGCCCACTaGCAGTGTGTGGATGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: PVVSGHEDPVVVALAADIRGAAH*QCVDAV Trigger: AACAGCATCCACACACTGTCAGTGGGCAGCACCACG...GATATCAGCGGCCAAGGCTACAACAACTGGATCTTCATGTCCACTCACTACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR CCA 90 bp | TATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGGGAACAGCCAGGCATCTCTaGCTCTCCAGCCTCCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: YLATMRLDMGLWMAWRQGTARHL*LSSLQG Trigger: TCCCTGGAGGCTGGAGAGCCAGAGATGCCTGGCTGT...TCCCTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACTAGCCTGGGGCAGGTaGGCCTTCCTCAAGCCGAGG | + |
|
Preference number: 2 (lower is better) Translates to: NFYLATMRLDMGLWMAWRLAWGR*AFLKPR Trigger: CCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAG...TCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGATGTGGTCTGACCTCTTaGCCACTGTACCTGCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGCGLTS*PLYLLQ Trigger: TTGGAGCAGGTACAGTGGGCAAGAGGTCAGACCACA...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTAGTAGTACAGAGTTCCTGTGTTAAAATAGTAGCCCTTATTCTCCAGGCCGCAGAGCCAGCACCATaGCCCAAGACTGGTAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GVVVQSSCVKIVALILQAAEPAP*PKTGSW Trigger: CCAGCTACCAGTCTTGGGCCATGGTGCTGGCTCTGC...GGCCTGGAGAATAAGGGCTACTATTTTAACACAGGAACTCTGTACTACTACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACTGGGGTATCTAGCCTaGGGCAGGTGGGCCTTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NFYLATMRLDMGLWMAWRLGYLA*GRWAFL Trigger: GAGGAAGGCCCACCTGCCCCAGGCTAGATACCCCAG...TCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTGTAGTAGTACAGAGTTCCTGTGTTAAAATAGTAGCCCTTATTCTCCAGGCCTGCTTGTCGGTGCACTaGTGGTGCAGGTCCGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GVVVQSSCVKIVALILQACLSVH*WCRSVV Trigger: CACCACGGACCTGCACCACCAGTGCACCGACAAGCA...GGCCTGGAGAATAAGGGCTACTATTTTAACACAGGAACTCTGTACTACTACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGCTTCTCTTCCAGCCTaGGAGCAGGACCTTGGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LLFGNYEVRHGAMDGLETASLPA*EQDLGV Trigger: TACCCCAAGGTCCTGCTCTCAGGCTGGAAGAGAAGC...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGGGAGGATCTGTGCATGCATaGTTTTGGGCACTGGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: YLATMRLDMGLWMAWRQGGSVHA*FWALGY Trigger: ATACCCCAGTGCCCAAAACCATGCATGCACAGATCC...TCCCTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGTACCTGCTCCAAAATaGGTAAGGACACATCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLFGNYEVRHGAMDGLETVPAPK*VRTHLF Trigger: GAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTAC...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGAGTACCTGCTCCAAAATaGGTAAGGACACATCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: NFYLATMRLDMGLWMAWRVPAPK*VRTHLF Trigger: GAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTAC...TCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR GCA 72 bp | TGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTaGAGCTGCGCCGGCCTGGACGCGCGGACCACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: WRPTPLILQSSA*SCAGLDARTTR Trigger: CCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCCTGGACGCGCGGCAGGTCAGGAGCGGGTaGGCCTCCAGGGCCAGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: TPLILQSSACSCAGLDARQVRSG*ASRARA Trigger: CGCCCTGGCCCTGGAGGCCAACCCGCTCCTGACCTG...CCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR GCA 72 bp | CCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTaGGCCGGCCTGGACGCGCGGACCACCAGGTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PTPLILQSSACS*AGLDARTTRCC Trigger: ACAGCACCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR CAA 90 bp | CGGATGAGGCGGCGGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCGGCACCTGGCGCCCCACGCCGTaGATCCTCCAGTCCTCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: RMRRRREPSEHAVTFFGTWRPTP*ILQSSA Trigger: GGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCA...GGTGCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCTCATCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR TCA 72 bp | CTCGAGCGAGCGGATGAGGCGGCGGCGCGAGCCATCTaGGCACGCGGTCACGTTCTTCGGCACCAGCATCCG | + |
|
Preference number: 3 (lower is better) Translates to: LERADEAAARAI*ARGHVLRHQHP Trigger: CGGATGCTGGTGCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR TCA 72 bp | GCGAAAGCTGGACCTGCACGTGCTCGAGCGAGCGGATaGGGCGGCGGCGCGAGCCATCTGAGCACGCGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: AKAGPARARASG*GGGASHLSTRS Trigger: TGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCTTTCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR TCA 72 bp | AGCCATAATGGTGGCTCACTTGGCGCCCCACGCCGTTaGTCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SHNGGSLGAPRR*SSSPPPAAAPA Trigger: GGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTGAGCCACCATTATGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR CCA 72 bp | CCAGCAGAGCCAGCACCATGGCCCAAGACTGGTAGCTaGGGGGCCACCAGAGGTGGCAAGCCTTGGAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: PAEPAPWPKTGS*GATRGGKPWRG Trigger: GCCCCTCCAAGGCTTGCCACCTCTGGTGGCCCCCCAGCTACCAGTCTTGGGCCATGGTGCTGGCTCTGCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CAA 90 bp | CATGGGGCTGGTGAGGAAGATCTCCAGGTCCCCGCGGCGGCTGTAGGAGAGCGAGAGGTGCCCGTGTGCTaGTCGGTGCACTGGTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HGAGEEDLQVPAAAVGEREVPVC*SVHWWC Trigger: GCACCACCAGTGCACCGACAAGCACACGGGCACCTC...TCGCTCTCCTACAGCCGCCGCGGGGACCTGGAGATCTTCCTCACCAGCCCCATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR GCA 72 bp | GCCGAGGTGCCCGTGTGCTTGTCGGTGCACTGGTGGTaGAGGTCCGTGGTGACGATCTGTGGGTCGGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: AEVPVCLSVHWW*RSVVTICGSVT Trigger: GGTCACCGACCCACAGATCGTCACCACGGACCTGCACCACCAGTGCACCGACAAGCACACGGGCACCTCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR GCA 72 bp | CGATCATGCCAGCAGCCAGCGGGGCAGATGCCGAGGTaGCCGTGTGCTTGTCGGTGCACTGGTGGTGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RSCQQPAGQMPR*PCACRCTGGAG Trigger: ACCTGCACCACCAGTGCACCGACAAGCACACGGGCACCTCGGCATCTGCCCCGCTGGCTGCTGGCATGATCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCGTGCTGTCATGTCCTCGGCCGTCCCATACAGCAGCAGGGTGTAGTAGTACACAGGTCAGGAGCGGGTaGGCCTCCAGGGCCAGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: AVLSCPRPSHTAAGCSSTQVRSG*ASRARA Trigger: CGCCCTGGCCCTGGAGGCCAACCCGCTCCTGACCTG...TGTACTACTACACCCTGCTGCTGTATGGGACGGCCGAGGACATGACAGCACGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR TCA 72 bp | CTGAGAGCAGGACCTTGGGGTACCGGCCTTCTGTCCTaGCAGCCAGGCATCTCTGGCTCTCCAGCCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LRAGPWGTGLLS*QPGISGSPASR Trigger: CCTGGAGGCTGGAGAGCCAGAGATGCCTGGCTGTCAGGACAGAAGGCCGGTACCCCAAGGTCCTGCTCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR TCA 72 bp | TGCCCTGGCCTTCTGGGGCAGGCTTCTCTTCCAGCCTaGGAGCAGGACCTTGGGGTACCGGCCTTCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CPGLLGQASLPA*EQDLGVPAFCP Trigger: AGGACAGAAGGCCGGTACCCCAAGGTCCTGCTCTCAGGCTGGAAGAGAAGCCTGCCCCAGAAGGCCAGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR CCA 72 bp | GGTGCACTGGTGGTGCAGGTCCGTGGTGACGATCTGTaGGTCGGTGACCACACCGCTGCTGAAGGTGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GALVVQVRGDDL*VGDHTAAEGGG Trigger: ACCACCACCTTCAGCAGCGGTGTGGTCACCGACCCACAGATCGTCACCACGGACCTGCACCACCAGTGCACC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR CCA 72 bp | CGGTCACGTTCTTCGGCACCAGCATCCGAGGCAGGATaGGGGTGGGGGTGTGCACCACCCGAATGGCACATT | + |
|
Preference number: 3 (lower is better) Translates to: RSRSSAPASEAG*GWGCAPPEWHI Trigger: AATGTGCCATTCGGGTGGTGCACACCCCCACCCCCATCCTGCCTCGGATGCTGGTGCCGAAGAACGTGACCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR CCA 72 bp | GTGACAGCTGGCCTGTCCTTCGGTCACTGGCTGCTGTaGGTGGCTGTAGAGCCACCACCACTGCTGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VTAGLSFGHWLL*VAVEPPPLLAG Trigger: TCCAGCCAGCAGTGGTGGTGGCTCTACAGCCACCCACAGCAGCCAGTGACCGAAGGACAGGCCAGCTGTCAC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR TCA 72 bp | GTGGGGGTGTGCACCACCCGAATGGCACATTTCTTCTaGGGCTTAGTGGGCAGCCACACGCGAGCCAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VGVCTTRMAHFF*GLVGSHTRARS Trigger: GGACCTGGCTCGCGTGTGGCTGCCCACTAAGCCTCAGAAGAAATGTGCCATTCGGGTGGTGCACACCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR GCA 72 bp | ACAGGGGACAGGCAGTGTAGTCGCTGCTCAGGCTGCTaGAGCAGGTGTAACAGGAGGGTGACAGCTGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TGDRQCSRCSGC*SRCNRRVTAGL Trigger: CAGGCCAGCTGTCACCCTCCTGTTACACCTGCTGCAGCAGCCTGAGCAGCGACTACACTGCCTGTCCCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR CCA 72 bp | GGGTACCGGCCTTCTGTCCTGACAGCCAGGCATCTCTaGCTCTCCAGCCTCCAGGGATCTGTGCATGCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GYRPSVLTARHL*LSSLQGSVHAW Trigger: CCATGCATGCACAGATCCCTGGAGGCTGGAGAGCCAGAGATGCCTGGCTGTCAGGACAGAAGGCCGGTACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCGTGCTGTCATGTCCTCGGCCGTCCCATACAGCAGCAGGGTGTAGTAGTACACCTGAGAGCAGGACCTaGGGGTACCGGCCTTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: AVLSCPRPSHTAAGCSSTPESRT*GYRPSV Trigger: GACAGAAGGCCGGTACCCCAAGGTCCTGCTCTCAGG...TGTACTACTACACCCTGCTGCTGTATGGGACGGCCGAGGACATGACAGCACGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR GCA 72 bp | CCAACACAAGGGACAGGGGACAGGCAGTGTAGTCGCTaGTCAGGCTGCTGCAGCAGGTGTAACAGGAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PTQGTGDRQCSR*SGCCSRCNRRV Trigger: CACCCTCCTGTTACACCTGCTGCAGCAGCCTGAGCAGCGACTACACTGCCTGTCCCCTGTCCCTTGTGTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| 3UTR CCA 72 bp | CGTTCTTCGGCACCAGCATCCGAGGCAGGATGGGGGTaGGGGTGTGCACCACCCGAATGGCACATTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RSSAPASEAGWG*GCAPPEWHISS Trigger: AGAAGAAATGTGCCATTCGGGTGGTGCACACCCCCACCCCCATCCTGCCTCGGATGCTGGTGCCGAAGAACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGAAGATCCAGTTGTTGTAGCCTTGGCCGCTGATATCCAACGGTCTGATGGCTGGCGCCCCACGCCGTaGATCCTCCAGTCCTCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: HEDPVVVALAADIQRSDGWRPTP*ILQSSA Trigger: GGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCA...GCCATCAGACCGTTGGATATCAGCGGCCAAGGCTACAACAACTGGATCTTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| 3UTR GCA 72 bp | GCATCTCTGGCTCTCCAGCCTCCAGGGATCTGTGCATaGATGGTTTTGGGCACTGGGGTATCTAGCCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASLALQPPGICA*MVLGTGVSSLG Trigger: CCCCAGGCTAGATACCCCAGTGCCCAAAACCATGCATGCACAGATCCCTGGAGGCTGGAGAGCCAGAGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR CCA 72 bp | GGATGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTaGCTGTGGTCTGACCTCTTGCCCACTGTACCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GWLGDREGADDW*LWSDLLPTVPA Trigger: AGCAGGTACAGTGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTGGTGACGATCTGTGGGTCGGTGACCACACCGCTGCTGAAGGTGGTGGTAAAATAGATGTGTATGTGTaGCGGCTGCAGGCTGAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: RGDDLWVGDHTAAEGGGKIDVYV*RLQAEG Trigger: TCCCTCAGCCTGCAGCCGCAACACATACACATCTAT...TTTACCACCACCTTCAGCAGCGGTGTGGTCACCGACCCACAGATCGTCACCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135071.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGACCTGAGAGCAGGACCTaGGGGTACCGGCCTTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGPESRT*GYRPSV Trigger: GACAGAAGGCCGGTACCCCAAGGTCCTGCTCTCAGG...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR CCA 72 bp | CTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTaGTCTGACCTCTTGCCCACTGTACCTGCTCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGDREGADDWWL*SDLLPTVPAPK Trigger: TTTTGGAGCAGGTACAGTGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR TCA 72 bp | TGGTCTGACCTCTTGCCCACTGTACCTGCTCCAAAATaGGTAAGGACACATCTCTTCCACTGGGAGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WSDLLPTVPAPK*VRTHLFHWEQL Trigger: CAGCTGCTCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAGAGGTCAGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTGGCCCCCTCTGTGTCCCTCTaGACACATGCGCGCGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AWGRWAFLKPRGLPKALAPSVSL*THARAR Trigger: CCGCGCGCGCGCATGTGTGCAGAGGGACACAGAGGG...GGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTGGCCTGTGGAGTCAGGGACTaGTGGGCCACACCCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AWGRWAFLKPRGLPKALACGVRD*WATPRC Trigger: GCACCGGGGTGTGGCCCAGCAGTCCCTGACTCCACA...GGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGAGTCAGGGACTGCTaGGCCACACCCCGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LTWRPTPLILQSSACSCAGVRDC*ATPRCR Trigger: GCGGCACCGGGGTGTGGCCCAGCAGTCCCTGACTCC...GGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | CGGATGAGGCGGCGGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCGGCACCGGAGTCAGGGACTGCTaGGCCACACCCCGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RMRRRREPSEHAVTFFGTGVRDC*ATPRCR Trigger: GCGGCACCGGGGTGTGGCCCAGCAGTCCCTGACTCC...GGTGCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCTCATCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR TCA 90 bp | CATGGGGCTGGTGAGGAAGATCTCCAGGTCCCCGCGGCGGCTGTAGGAGAGCGAGATGGGGGCCTGGGCTaGGGCCCACCTCACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HGAGEEDLQVPAAAVGERDGGLG*GPPHSQ Trigger: CTGGCTGTGAGGTGGGCCTCAGCCCAGGCCCCCATC...TCGCTCTCCTACAGCCGCCGCGGGGACCTGGAGATCTTCCTCACCAGCCCCATG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGACCTGCACGTGCTCGAGCGAGCGGATGAGGCGGCGGCGCGAGCCATCGCACTGCCCAGCTGCTaGCATAGATGGGGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KLDLHVLERADEAAARAIALPSC*HRWGPG Trigger: CCCAGGCCCCCATCTATGTCAGCAGCTGGGCAGTGC...GATGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGAGGAAGATCTCCAGGTCCCCGCGGCGGCTGTAGGAGAGCGAAAGCTGGATGGGGGCCTGGGCTaGGGCCCACCTCACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGEEDLQVPAAAVGERKLDGGLG*GPPHSQ Trigger: CTGGCTGTGAGGTGGGCCTCAGCCCAGGCCCCCATC...CAGCTTTCGCTCTCCTACAGCCGCCGCGGGGACCTGGAGATCTTCCTCACCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTGGCCCGTGGTGCTGCCCACTaGCAGTGTGTGGATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AWGRWAFLKPRGLPKALARGAAH*QCVDAV Trigger: AACAGCATCCACACACTGTCAGTGGGCAGCACCACG...GGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | ACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCCTGGACGCGCGGTGGCTCCATCCAACATaGGCACGCCGGTTCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: TPLILQSSACSCAGLDARWLHPT*ARRFSS Trigger: CGATGAGAACCGGCGTGCGCATGTTGGATGGAGCCA...CCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGT 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGCAGCTGCGCCGGCCTGGACGCGCGGACCACCAGGTGCTGTAGGTCCCTCGCCCAGAGGTCCGGGTaGTCTTTCTCAATGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: ACSCAGLDARTTRCCRSLAQRSG*SFSMPS Trigger: CGATGGCATTGAGAAAGACCACCCGGACCTCTGGGC...GAGGGACCTACAGCACCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGCAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTGGCCCTGTCCTTCGGTCACTaGCTGCTGTGGGTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: AWGRWAFLKPRGLPKALALSFGH*LLWVAV Trigger: TACAGCCACCCACAGCAGCCAGTGACCGAAGGACAG...GGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR TCA 90 bp | GTATCTAGCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCGCACTGCCCAGCTGCTaGCATAGATGGGGGCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSLGQVGLPQAEGPPKGALPSC*HRWGPG Trigger: CCCAGGCCCCCATCTATGTCAGCAGCTGGGCAGTGC...GCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAGATAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTGGCCCGCCTCAAAGTCTGCTaGTCAAACCAGCGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AWGRWAFLKPRGLPKALARLKVC*SNQRTL Trigger: CAAGGTGCGCTGGTTTGAGCAGCAGACTTTGAGGCG...GGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR GCA 90 bp | GCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCCTGGACGCCTCAAAGTCTGCTaGTCAAACCAGCGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: APHAVDPPVLRLQLRRPGRLKVC*SNQRTL Trigger: CAAGGTGCGCTGGTTTGAGCAGCAGACTTTGAGGCG...TCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR GCA 90 bp | GGGTATCTAGCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGCAGGTCCGTCCACCGTaGGACCATCATCCTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GYLAWGRWAFLKPRGLPKQVRPP*DHHPPG Trigger: GCCCGGAGGATGATGGTCGCACGGTGGACGGACCTG...CTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAGATACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | CTCACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCCCCCGGTGCCGCAGATaGAAATACTGGTCGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTWRPTPLILQSSACSCAPRCRR*KYWSSG Trigger: CCCTGACGACCAGTATTTCCATCTGCGGCACCGGGG...GGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTGAG 67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGCTTCTCTTCCAGCCTGAGAGCAGGACCTTGGGGTACCGGCCTTCTGTCCGGAGTCAGGGACTGCTaGGCCACACCCCGGTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: AGFSSSLRAGPWGTGLLSGVRDC*ATPRCR Trigger: GCGGCACCGGGGTGTGGCCCAGCAGTCCCTGACTCC...GGACAGAAGGCCGGTACCCCAAGGTCCTGCTCTCAGGCTGGAAGAGAAGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | ACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGCCTGGACGCGCGGTTCAGTCGTAGACGATaGCCCCAGTGTGGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPLILQSSACSCAGLDARFSRRR*PQCGVR Trigger: CCTGACTCCACACTGGGGCCATCGTCTACGACTGAA...CCGCGCGTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCCGGAGTGTACCCAGCCCTTaGCGGCCCTTGGTTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: HLAPHAVDPPVLRLQLRRSVPSP*RPLVTP Trigger: TGGTGTAACCAAGGGCCGCCAAGGGCTGGGTACACT...CCGGCGCAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTGGCCCTGGGTCATAGTCGTTaGAGTCATAGCTGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AWGRWAFLKPRGLPKALALGHSR*SHSWPE Trigger: CTCTGGCCAGCTATGACTTCAACGACTATGACCCAG...GGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR TCA 90 bp | GAGCGGATGAGGCGGCGGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCGGCTTCCCGAGGCCCAGATaGACAGTGTACCCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ERMRRRREPSEHAVTFFGFPRPR*TVYPAL Trigger: AAGGGCTGGGTACACTGTTCATCTGGGCCTCGGGAA...GCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCTCATCCGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTGGCCCTGACAGTGTGTGGATaGTGTTGGTGTAGCCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AWGRWAFLKPRGLPKALALTVCG*CWCSRH Trigger: GTGACGGCTACACCAACAGCATCCACACACTGTCAG...GGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | GATCTCCAGGTCCCCGCGGCGGCTGTAGGAGAGCGAAAGCTGGACCTGCACGTGACGATGGCCCCAGTGTaGAGTCAGGGACTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLQVPAAAVGERKLDLHVTMAPV*SQGLLG Trigger: GCCCAGCAGTCCCTGACTCCACACTGGGGCCATCGT...CACGTGCAGGTCCAGCTTTCGCTCTCCTACAGCCGCCGCGGGGACCTGGAGATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGCTGGACCTGCACGTGCTCGAGCGAGCGGATGAGGCGGCGGCGCGAGCCAAAAACCAGGGGTCTGTaGGCACCACCAGGGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESWTCTCSSERMRRRREPKTRGL*APPGSV Trigger: AACGCTCCCTGGTGGTGCCCACAGACCCCTGGTTTT...TGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCTTTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | GAGCGGATGAGGCGGCGGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCGGCGCGAGGCTGGGGGTCTaGGTCATAGTCGTTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ERMRRRREPSEHAVTFFGARLGV*VIVVEV Trigger: GACTTCAACGACTATGACCCAGACCCCCAGCCTCGC...GCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCTCATCCGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR GCA 90 bp | GTATCTAGCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCATGGGGGTGGGGGTGTaGACCACCCGAATGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSLGQVGLPQAEGPPKGMGVGV*TTRMAH Trigger: ATGTGCCATTCGGGTGGTGCACACCCCCACCCCCAT...GCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAGATAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGATCTCCAGGTCCCCGCGGCGGCTGTAGGAGAGCGAAAGCTGGACCTGACGATGGCCCCAGTGTaGAGTCAGGGACTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EEDLQVPAAAVGERKLDLTMAPV*SQGLLG Trigger: GCCCAGCAGTCCCTGACTCCACACTGGGGCCATCGT...CAGGTCCAGCTTTCGCTCTCCTACAGCCGCCGCGGGGACCTGGAGATCTTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | CGGATGAGGCGGCGGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCGGCACCTGCCATCGTCCAAGATaGAAATCACCACTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RMRRRREPSEHAVTFFGTCHRPR*KSPLPG Trigger: GCCGGGGAGTGGTGATTTCCATCTTGGACGATGGCA...GGTGCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCTCATCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | AGGACACATCTCTTCCACTGGGAGCAGCTGAGGCTGAGCGGTGGGCTGTCACCTAGGTCAGGAGCGGGTTaGCCTCCAGGGCCAGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: RTHLFHWEQLRLSGGLSPRSGAG*PPGPGR Trigger: TCGCCCTGGCCCTGGAGGCCAACCCGCTCCTGACCT...AGGTGACAGCCCACCGCTCAGCCTCAGCTGCTCCCAGTGGAAGAGATGTGTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGGCAGCTGCGCCGGCCTaGACGCGCGGACCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WLGDREGADDWWLWSDLLAAAPA*TRGPPG Trigger: ACCTGGTGGTCCGCGCGTCCAGGCCGGCGCAGCTGC...CAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCACTGTACCTGATGGGGGCCTGGGCTaGGGCCCACCTCACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: REGADDWWLWSDLLPTVPDGGLG*GPPHSQ Trigger: CTGGCTGTGAGGTGGGCCTCAGCCCAGGCCCCCATC...AGGTACAGTGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR TCA 90 bp | GGCTATGGATGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGGCGCCCCACGCCGTTaGTCCTCCAGTCCTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GYGWLGDREGADDWWLWSGAPRR*SSSPPP Trigger: AGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCC...AGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCATCCATAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | GCCTGGACGCGCGGACCACCAGGTGCTGTAGGTCCCTCCAGGTCAGGAGCGGGTTTTGGTCACCCGCACTaGCCAGCTGCTGACATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AWTRGPPGAVGPSRSGAGFGHPH*PAADID Trigger: ATCTATGTCAGCAGCTGGGCAGTGCGGGTGACCAAA...ACCCGCTCCTGACCTGGAGGGACCTACAGCACCTGGTGGTCCGCGCGTCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | GTATCTAGCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCGCGAGGCTGGGGGTCTaGGTCATAGTCGTTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSLGQVGLPQAEGPPKGARLGV*VIVVEV Trigger: GACTTCAACGACTATGACCCAGACCCCCAGCCTCGC...GCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAGATAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | GTATCTAGCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCAGCCACCACCACTGCTaGCTGGAGATGAGGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSLGQVGLPQAEGPPKGSHHHC*LEMRQS Trigger: ACTCTGCCTCATCTCCAGCCAGCAGTGGTGGTGGCT...GCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAGATAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR TCA 90 bp | GGGTATCTAGCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGCCTCCACGATGTCAGTaGTGGCTCCATCCAACATGC | + |
|
Preference number: 4 (lower is better) Translates to: GYLAWGRWAFLKPRGLPKPPRCQ*WLHPTC Trigger: GCATGTTGGATGGAGCCATCACTGACATCGTGGAGG...CTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAGATACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTGGCCTTGTTCATGTACCACTaGTTGGAAAACCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AWGRWAFLKPRGLPKALALFMYH*LENQGS Trigger: AGACCCCTGGTTTTCCAAGCAGTGGTACATGAACAA...GGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCAGTCCCTCTGCACACATaGGCGCGCGCGGCTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LETGKGQMIGGCGLTSCPVPLHT*ARAAGH Trigger: GTGACCAGCCGCGCGCGCGCATGTGTGCAGAGGGAC...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | GAGGAAGATCTCCAGGTCCCCGCGGCGGCTGTAGGAGAGCGAAAGCTGGACCTGCGGCCGGTCAGTCCCTaGTTCCAAGCCTTTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: EEDLQVPAAAVGERKLDLRPVSP*FQAFRM Trigger: CATCCTAAAGGCTTGGAACCAGGGACTGACCGGCCG...CAGGTCCAGCTTTCGCTCTCCTACAGCCGCCGCGGGGACCTGGAGATCTTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | GTATCTAGCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCTGCCATCGTCCAAGATaGAAATCACCACTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSSLGQVGLPQAEGPPKGCHRPR*KSPLPG Trigger: GCCGGGGAGTGGTGATTTCCATCTTGGACGATGGCA...GCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAGATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR CAA 72 bp | GCTCTCCAGCCTCCAGGGATCTGTGCATGCATGGTTTaGGGCACTGGGGTATCTAGCCTGGGGCAGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALQPPGICACMV*GTGVSSLGQVG Trigger: GCCCACCTGCCCCAGGCTAGATACCCCAGTGCCCAAAACCATGCATGCACAGATCCCTGGAGGCTGGAGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| 3UTR CAA 72 bp | GCCCAGATGAACAGTGTACCCAGCCCTTGGCGGCCCTaGGTTACACCACGCCTGAAGGCCTCCTGTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AQMNSVPSPWRP*VTPRLKASCVR Trigger: CCTCACACAGGAGGCCTTCAGGCGTGGTGTAACCAAGGGCCGCCAAGGGCTGGGTACACTGTTCATCTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135071.2 |
||
| 3UTR CAA 72 bp | GTTTCCCGAGGCCCAGATGAACAGTGTACCCAGCCCTaGGCGGCCCTTGGTTACACCACGCCTGAAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSRGPDEQCTQP*AALGYTTPEGL Trigger: GAGGCCTTCAGGCGTGGTGTAACCAAGGGCCGCCAAGGGCTGGGTACACTGTTCATCTGGGCCTCGGGAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135071.2 |
||
| CDS-3UTR TCA 90 bp | TCGCTGTACCAGGGCACTCGACCCTGCCGCGTGGTGCTGCCCACTGACAGTGTGCTGGGTCATAGTCGTTaGAGTCATAGCTGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLYQGTRPCRVVLPTDSVLGHSR*SHSWPE Trigger: CTCTGGCCAGCTATGACTTCAACGACTATGACCCAG...CACACTGTCAGTGGGCAGCACCACGCGGCAGGGTCGAGTGCCCTGGTACAGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGGTTGCGGCTGCAGGCTaGGGGACTGAGCCTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: WLGDREGADDWWLWSDLLVAAAG*GTEPPR Trigger: TCGTGGAGGCTCAGTCCCTCAGCCTGCAGCCGCAAC...CAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGTGTGGAGTCAGGGACTaGTGGGCCACACCCCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: WLGDREGADDWWLWSDLLCGVRD*WATPRC Trigger: GCACCGGGGTGTGGCCCAGCAGTCCCTGACTCCACA...CAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR GCA 90 bp | GGCTATGGATGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGCCGAGGTGCCCGTGTaGTTGTCGGTGCACTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYGWLGDREGADDWWLWSAEVPV*LSVHWW Trigger: CCACCAGTGCACCGACAAGCACACGGGCACCTCGGC...AGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCATCCATAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | TGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGGCGCGGACCACCAGGTaGTGTAGGTCCCTCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLGDREGADDWWLWSDLLARTTR*CRSLQV Trigger: GACCTGGAGGGACCTACAGCACCTGGTGGTCCGCGC...CAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGACCTGCACGTGCTCGAGCGAGCGGATGAGGCGGCGGCGCGAGCCATCCGCAGATGGAAATACTaGTCGTCAGGGAAGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLDLHVLERADEAAARAIRRWKY*SSGKIC Trigger: ACAGATCTTCCCTGACGACCAGTATTTCCATCTGCG...GATGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | GGCTATGGATGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTCTCGACCCTGCCGCGTaGTGCTGCCCACTGACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYGWLGDREGADDWWLWSLDPAA*CCPLTV Trigger: CACTGTCAGTGGGCAGCACCACGCGGCAGGGTCGAG...AGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCATCCATAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCAGCATCCGAGGCAGGATaGGGGTGGGGGTGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LETGKGQMIGGCGLTSCPASEAG*GWGCAP Trigger: TGGTGCACACCCCCACCCCCATCCTGCCTCGGATGC...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR TCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCATGCCCATGGGGCTGGTaGGGAAGATCTCCAGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LETGKGQMIGGCGLTSCPCPWGW*GRSPGP Trigger: GGGACCTGGAGATCTTCCTCACCAGCCCCATGGGCA...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | GAAAGCTGGACCTGCACGTGCTCGAGCGAGCGGATGAGGCGGCGGCGCGAGCCATTGTTCATGTACCACTaGTTGGAAAACCAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESWTCTCSSERMRRRREPLFMYH*LENQGS Trigger: AGACCCCTGGTTTTCCAAGCAGTGGTACATGAACAA...TGGCTCGCGCCGCCGCCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR GCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCAAGCTGGACCTGCACGTaGTCGAGCGAGCGGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LETGKGQMIGGCGLTSCPSWTCT*SSERMR Trigger: CCTCATCCGCTCGCTCGAGCACGTGCAGGTCCAGCT...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | GTGGCTCACTTGGCGCCCCACGCCGTTGATCCTCCAGTCCTCCGCCTGCAGCTGCGCAGATGGAAATACTaGTCGTCAGGGAAGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAHLAPHAVDPPVLRLQLRRWKY*SSGKIC Trigger: ACAGATCTTCCCTGACGACCAGTATTTCCATCTGCG...CAGCTGCAGGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCAAGTGAGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGGGTGTAACAGGAGGGTaGCAGCTGGCCTGTCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: WLGDREGADDWWLWSDLLGVTGG*QLACPS Trigger: CGAAGGACAGGCCAGCTGTCACCCTCCTGTTACACC...CAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | CGTGTGCTTGTCGGTGCACTGGTGGTGCAGGTCCGTGGTGACGATCTGTGGGTCTTTGGTCACCCGCACTaGCCAGCTGCTGACATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVLVGALVVQVRGDDLWVFGHPH*PAADID Trigger: ATCTATGTCAGCAGCTGGGCAGTGCGGGTGACCAAA...GACCCACAGATCGTCACCACGGACCTGCACCACCAGTGCACCGACAAGCACACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR GCA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGAGGGGGCCTGGGGCCGTaGTGTCATGTCCTCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGGGLGP*CHVLGR Trigger: ACGGCCGAGGACATGACAGCACGGCCCCAGGCCCCC...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCCGGTGCCGCAGATaGAAATACTGGTCGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WLGDREGADDWWLWSDLLPRCRR*KYWSSG Trigger: CCCTGACGACCAGTATTTCCATCTGCGGCACCGGGG...CAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | GGCTATGGATGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGGTCACTGGCTGCTGTaGGTGGCTGTAGAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GYGWLGDREGADDWWLWSGHWLL*VAVEPP Trigger: TGGTGGCTCTACAGCCACCCACAGCAGCCAGTGACC...AGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCATCCATAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCAAAAACCAGGGGTCTGTaGGCACCACCAGGGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LETGKGQMIGGCGLTSCPKTRGL*APPGSV Trigger: AACGCTCCCTGGTGGTGCCCACAGACCCCTGGTTTT...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCACGGCCGGTCAGTCCCTaGTTCCAAGCCTTTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LETGKGQMIGGCGLTSCPRPVSP*FQAFRM Trigger: CATCCTAAAGGCTTGGAACCAGGGACTGACCGGCCG...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCAGCCCAGAGGTCCGGGTaGTCTTTCTCAATGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: LETGKGQMIGGCGLTSCPAQRSG*SFSMPS Trigger: CGATGGCATTGAGAAAGACCACCCGGACCTCTGGGC...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGCTTCTCTTCCAGCCTGAGAGCAGGACCTTGGGGTACCGGCCTTCTGTCCGTGTGTGGATGCTGTTaGTGTAGCCGTCACAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGFSSSLRAGPWGTGLLSVCGCC*CSRHNC Trigger: GCAATTGTGACGGCTACACCAACAGCATCCACACAC...GGACAGAAGGCCGGTACCCCAAGGTCCTGCTCTCAGGCTGGAAGAGAAGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCACTGTACCTCGCCTCAAAGTCTGCTaGTCAAACCAGCGCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: REGADDWWLWSDLLPTVPRLKVC*SNQRTL Trigger: CAAGGTGCGCTGGTTTGAGCAGCAGACTTTGAGGCG...AGGTACAGTGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR GCA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGAAGCCAGCGGGGCAGATaGCGAGGTGCCCGTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGSQRGR*RGARVL Trigger: AAGCACACGGGCACCTCGGCATCTGCCCCGCTGGCT...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACACTCCAGTCCTCCGCCTaGAGCTGCGCCGGCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLFGNYEVRHGAMDGLETLQSSA*SCAGLD Trigger: GTCCAGGCCGGCGCAGCTGCAGGCGGAGGACTGGAG...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACACAGGGCACTCGACCCTaGCGCGTGGTGCTGCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLFGNYEVRHGAMDGLETQGTRP*RVVLPT Trigger: AGTGGGCAGCACCACGCGGCAGGGTCGAGTGCCCTG...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | CATGAAGATCCAGTTGTTGTAGCCTTGGCCGCTGATATCCAACGGTCTGATGGCGCGAGGCTGGGGGTCTaGGTCATAGTCGTTGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HEDPVVVALAADIQRSDGARLGV*VIVVEV Trigger: GACTTCAACGACTATGACCCAGACCCCCAGCCTCGC...GCCATCAGACCGTTGGATATCAGCGGCCAAGGCTACAACAACTGGATCTTCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGATTGTCGGTGCACTGGTaGTGCAGGTCCGTGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGLSVHW*CRSVVT Trigger: CGTCACCACGGACCTGCACCACCAGTGCACCGACAA...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| 3UTR CAA 72 bp | GGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTaGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GNYEVRHGAMDG*ETGKGQMIGGC Trigger: ACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCACGCAGATGGAAATACTaGTCGTCAGGGAAGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LETGKGQMIGGCGLTSCPRRWKY*SSGKIC Trigger: ACAGATCTTCCCTGACGACCAGTATTTCCATCTGCG...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGAAGTGTACCCAGCCCTTaGCGGCCCTTGGTTACACCA | + |
|
Preference number: 4 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGSVPSP*RPLVTP Trigger: TGGTGTAACCAAGGGCCGCCAAGGGCTGGGTACACT...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGAGGCAGGATGGGGGTaGGGGTGTGCACCACCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLFGNYEVRHGAMDGLETEAGWG*GCAPPE Trigger: TTCGGGTGGTGCACACCCCCACCCCCATCCTGCCTC...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| 3UTR CAA 72 bp | GTAGTGAGTGGACATGAAGATCCAGTTGTTGTAGCCTaGGCCGCTGATATCCAACGGTCTGATGGCCACGAG | + |
|
Preference number: 4 (lower is better) Translates to: VVSGHEDPVVVA*AADIQRSDGHE Trigger: CTCGTGGCCATCAGACCGTTGGATATCAGCGGCCAAGGCTACAACAACTGGATCTTCATGTCCACTCACTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTGACCTCTTGCCCAAGTAGTGAGTGGACATaGAGATCCAGTTGTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LETGKGQMIGGCGLTSCPSSEWT*RSSCCS Trigger: GCTACAACAACTGGATCTTCATGTCCACTCACTACT...TGGGCAAGAGGTCAGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGATTCAGTCGTAGACGATaGCCCCAGTGTGGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGFSRRR*PQCGVR Trigger: CCTGACTCCACACTGGGGCCATCGTCTACGACTGAA...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGGGAAAAACCAGGGGTCTGTaGGCACCACCAGGGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: YLATMRLDMGLWMAWRQGKTRGL*APPGSV Trigger: AACGCTCCCTGGTGGTGCCCACAGACCCCTGGTTTT...TCCCTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGATGCCATCGTCCAAGATaGAAATCACCACTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGCHRPR*KSPLPG Trigger: GCCGGGGAGTGGTGATTTCCATCTTGGACGATGGCA...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAATGGAGAGGGGACTGTaGCTTTCCTGGCACAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLFGNYEVRHGAMDGLETMERGL*LSWHSP Trigger: GGGGCTGTGCCAGGAAAGTCACAGTCCCCTCTCCAT...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR GCA 90 bp | CTTGCCCACTGTACCTGCTCCAAAATGAGTAAGGACACATCTCTTCCACTGGGATTTGGTCACCCGCACTaGCCAGCTGCTGACATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LAHCTCSKMSKDTSLPLGFGHPH*PAADID Trigger: ATCTATGTCAGCAGCTGGGCAGTGCGGGTGACCAAA...TCCCAGTGGAAGAGATGTGTCCTTACTCATTTTGGAGCAGGTACAGTGGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | AACTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGAACGATGGCCCCAGTGTaGAGTCAGGGACTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NFYLATMRLDMGLWMAWRTMAPV*SQGLLG Trigger: GCCCAGCAGTCCCTGACTCCACACTGGGGCCATCGT...TCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | TATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGGGATTCAGTCGTAGACGATaGCCCCAGTGTGGAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YLATMRLDMGLWMAWRQGFSRRR*PQCGVR Trigger: CCTGACTCCACACTGGGGCCATCGTCTACGACTGAA...TCCCTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGTGCTTGTCGGTGCACTaGTGGTGCAGGTCCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FYLATMRLDMGLWMAWRQCLSVH*WCRSVV Trigger: CACCACGGACCTGCACCACCAGTGCACCGACAAGCA...CTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACATTCCCGAGGCCCAGATaGACAGTGTACCCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLFGNYEVRHGAMDGLETFPRPR*TVYPAL Trigger: AAGGGCTGGGTACACTGTTCATCTGGGCCTCGGGAA...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR TCA 90 bp | TATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGGGAATGGCACATTTCTTCTaGGGCTTAGTGGGCAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: YLATMRLDMGLWMAWRQGMAHFF*GLVGSH Trigger: GTGGCTGCCCACTAAGCCTCAGAAGAAATGTGCCAT...TCCCTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CCA 90 bp | TTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGCGGCCGGTCAGTCCCTaGTTCCAAGCCTTTAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FYLATMRLDMGLWMAWRQRPVSP*FQAFRM Trigger: CATCCTAAAGGCTTGGAACCAGGGACTGACCGGCCG...CTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTAGTAGTACAGAGTTCCTGTGTTAAAATAGTAGCCCTTATTCTCCAGGCCGCCCAGAGGTCCGGGTaGTCTTTCTCAATGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: GVVVQSSCVKIVALILQAAQRSG*SFSMPS Trigger: CGATGGCATTGAGAAAGACCACCCGGACCTCTGGGC...GGCCTGGAGAATAAGGGCTACTATTTTAACACAGGAACTCTGTACTACTACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CCA 90 bp | TATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGGGAAGAGTCCTGCCAGGATaGAGAGGGGACTGTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLATMRLDMGLWMAWRQGRVLPG*RGDCDF Trigger: AAAGTCACAGTCCCCTCTCCATCCTGGCAGGACTCT...TCCCTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR TCA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACACTGGGTCATAGTCGTTaGAGTCATAGCTGGCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFGNYEVRHGAMDGLETLGHSR*SHSWPE Trigger: CTCTGGCCAGCTATGACTTCAACGACTATGACCCAG...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCCCTGGCCCAGGTCAGGAGCGGGTaGGCCTCCAGGGCCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: AWGRWAFLKPRGLPKALAQVRSG*ASRARA Trigger: CGCCCTGGCCCTGGAGGCCAACCCGCTCCTGACCTG...GGCCAGGGCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CAA 90 bp | GTATCTAGCCTGGGGCAGGTGGGCCTTCCTCAAGCCGAGGGGCCTCCCAAAGGCTGGCGCCCCACGCCGTaGATCCTCCAGTCCTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSSLGQVGLPQAEGPPKGWRPTP*ILQSSA Trigger: GGCGGAGGACTGGAGGATCAACGGCGTGGGGCGCCA...GCCTTTGGGAGGCCCCTCGGCTTGAGGAAGGCCCACCTGCCCCAGGCTAGATAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS GCA 90 bp | CGATGGCCCCAGTGTGGAGTCAGGGACTGCTGGGCCACACCCCGGTaGCGCAGATGGAAATACTGGTCGTCAGGGAAGATCTGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RWPQCGVRDCWATPR*RRWKYWSSGKICPR Trigger: CCTGGGACAGATCTTCCCTGACGACCAGTATTTCCATCTGCGGCACCGGGGTGTGGCCCAGCAGTCCCTGACTCCACACTGGGGCCATCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS CCA 90 bp | TTCTTCAGTCGTAGACGATGGCCCCAGTGTGGAGTCAGGGACTGCTaGGCCACACCCCGGTGCCGCAGATGGAAATACTGGTCGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FFSRRRWPQCGVRDC*ATPRCRRWKYWSSG Trigger: CCCTGACGACCAGTATTTCCATCTGCGGCACCGGGGTGTGGCCCAGCAGTCCCTGACTCCACACTGGGGCCATCGTCTACGACTGAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS CCA 90 bp | TGCTCAAACCAGCGCACCTTGGGATCTTTCTTCAGTCGTAGACGATaGCCCCAGTGTGGAGTCAGGGACTGCTGGGCCACACCCCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSNQRTLGSFFSRRR*PQCGVRDCWATPRC Trigger: GCACCGGGGTGTGGCCCAGCAGTCCCTGACTCCACACTGGGGCCATCGTCTACGACTGAAGAAAGATCCCAAGGTGCGCTGGTTTGAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS CCA 90 bp | CAGTGTGGAGTCAGGGACTGCTGGGCCACACCCCGGTGCCGCAGATaGAAATACTGGTCGTCAGGGAAGATCTGTCCCAGGTTGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QCGVRDCWATPRCRR*KYWSSGKICPRLTK Trigger: CTTCGTCAACCTGGGACAGATCTTCCCTGACGACCAGTATTTCCATCTGCGGCACCGGGGTGTGGCCCAGCAGTCCCTGACTCCACACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS GCA 90 bp | TCTTTCTTCAGTCGTAGACGATGGCCCCAGTGTGGAGTCAGGGACTaGTGGGCCACACCCCGGTGCCGCAGATGGAAATACTGGTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFFSRRRWPQCGVRD*WATPRCRRWKYWSS Trigger: TGACGACCAGTATTTCCATCTGCGGCACCGGGGTGTGGCCCAGCAGTCCCTGACTCCACACTGGGGCCATCGTCTACGACTGAAGAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS GCA 90 bp | GTGGGCACCACCAGGGAGCGTTTCACCCGGCGCCTCAAAGTCTGCTaGTCAAACCAGCGCACCTTGGGATCTTTCTTCAGTCGTAGACGA | + |
|
Preference number: 5 (lower is better) Translates to: VGTTRERFTRRLKVC*SNQRTLGSFFSRRR Trigger: TCGTCTACGACTGAAGAAAGATCCCAAGGTGCGCTGGTTTGAGCAGCAGACTTTGAGGCGCCGGGTGAAACGCTCCCTGGTGGTGCCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS GCA 90 bp | TCTGTGGGCACCACCAGGGAGCGTTTCACCCGGCGCCTCAAAGTCTaGTGCTCAAACCAGCGCACCTTGGGATCTTTCTTCAGTCGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVGTTRERFTRRLKV*CSNQRTLGSFFSRR Trigger: TCTACGACTGAAGAAAGATCCCAAGGTGCGCTGGTTTGAGCAGCAGACTTTGAGGCGCCGGGTGAAACGCTCCCTGGTGGTGCCCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTGCTGTCATGTCCTCGGCCGTCCCATACAGCAGCAGGGTGTAGTAGTACACCTCCAATTCTAGCATaGAAGGCCACACCGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: AVLSCPRPSHTAAGCSSTPPILA*KATPAP Trigger: TGGTGCCGGTGTGGCCTTCAATGCTAGAATTGGAGG...TGTACTACTACACCCTGCTGCTGTATGGGACGGCCGAGGACATGACAGCACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
||
| CDS CCA 90 bp | GTCAGGGACTGCTGGGCCACACCCCGGTGCCGCAGATGGAAATACTaGTCGTCAGGGAAGATCTGTCCCAGGTTGACGAAGCCAAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: VRDCWATPRCRRWKY*SSGKICPRLTKPNL Trigger: TAAATTTGGCTTCGTCAACCTGGGACAGATCTTCCCTGACGACCAGTATTTCCATCTGCGGCACCGGGGTGTGGCCCAGCAGTCCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS CCA 90 bp | GTTTCACCCGGCGCCTCAAAGTCTGCTGCTCAAACCAGCGCACCTTaGGATCTTTCTTCAGTCGTAGACGATGGCCCCAGTGTGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSPGASKSAAQTSAP*DLSSVVDDGPSVES Trigger: TGACTCCACACTGGGGCCATCGTCTACGACTGAAGAAAGATCCCAAGGTGCGCTGGTTTGAGCAGCAGACTTTGAGGCGCCGGGTGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCTCCAGGGATCTGTGCATGCATGGTTTTGGGCACTGGGGTATCTAGCCTGCCTCCAATTCTAGCATaGAAGGCCACACCGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QPPGICACMVLGTGVSSLPPILA*KATPAP Trigger: TGGTGCCGGTGTGGCCTTCAATGCTAGAATTGGAGG...CAGGCTAGATACCCCAGTGCCCAAAACCATGCATGCACAGATCCCTGGAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CAA 90 bp | AGGCGGCGGCGCGAGCCATCTGAGCACGCGGTCACGTTCTTCGGCACCAGCATCGATGTTGAGATCTTGTaGTATCTCCTTGTTCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: RRRREPSEHAVTFFGTSIDVEIL*YLLVHV Trigger: TACATGAACAAGGAGATACAACAAGATCTCAACATC...GATGCTGGTGCCGAAGAACGTGACCGCGTGCTCAGATGGCTCGCGCCGCCGCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CAA 90 bp | GGCTATGGATGGCTTGGAGACAGGGAAGGGGCAGATGATTGGTGGCTGTGGTCTATAGATGTGTATGTGTaGCGGCTGCAGGCTGAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GYGWLGDREGADDWWLWSIDVYV*RLQAEG Trigger: TCCCTCAGCCTGCAGCCGCAACACATACACATCTAT...AGACCACAGCCACCAATCATCTGCCCCTTCCCTGTCTCCAAGCCATCCATAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS-3UTR CAA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGAGGTGCCCGTGTGCTaGTCGGTGCACTGGTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFGNYEVRHGAMDGLETEVPVC*SVHWWC Trigger: GCACCACCAGTGCACCGACAAGCACACGGGCACCTC...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020340.15 |
||
| CDS GCA 90 bp | TTTAGGATGTTGAGATCTTGTTGTATCTCCTTGTTCATGTACCACTaGTTGGAAAACCAGGGGTCTGTGGGCACCACCAGGGAGCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FRMLRSCCISLFMYH*LENQGSVGTTRERF Trigger: GAAACGCTCCCTGGTGGTGCCCACAGACCCCTGGTTTTCCAAGCAGTGGTACATGAACAAGGAGATACAACAAGATCTCAACATCCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
||
| CDS-3UTR CAA 90 bp | TTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGGATGTTGAGATCTTGTaGTATCTCCTTGTTCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: FYLATMRLDMGLWMAWRQDVEIL*YLLVHV Trigger: TACATGAACAAGGAGATACAACAAGATCTCAACATC...CTGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS-3UTR CAA 90 bp | CTTTTATTTGGCAACTATGAGGTTAGACATGGGGCTATGGATGGCTTGGAGACAGATGTTGAGATCTTGTaGTATCTCCTTGTTCATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LLFGNYEVRHGAMDGLETDVEIL*YLLVHV Trigger: TACATGAACAAGGAGATACAACAAGATCTCAACATC...TGTCTCCAAGCCATCCATAGCCCCATGTCTAACCTCATAGTTGCCAAATAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
||
| CDS CCA 72 bp | CGTAGACGATGGCCCCAGTGTGGAGTCAGGGACTGCTaGGCCACACCCCGGTGCCGCAGATGGAAATACTGG | + |
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Preference number: 6 (lower is better) Translates to: RRRWPQCGVRDC*ATPRCRRWKYW Trigger: CCAGTATTTCCATCTGCGGCACCGGGGTGTGGCCCAGCAGTCCCTGACTCCACACTGGGGCCATCGTCTACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS GCA 72 bp | CAGTGTGGAGTCAGGGACTGCTGGGCCACACCCCGGTaGCGCAGATGGAAATACTGGTCGTCAGGGAAGATC | + |
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Preference number: 6 (lower is better) Translates to: QCGVRDCWATPR*RRWKYWSSGKI Trigger: GATCTTCCCTGACGACCAGTATTTCCATCTGCGGCACCGGGGTGTGGCCCAGCAGTCCCTGACTCCACACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS CCA 72 bp | TGCTGGGCCACACCCCGGTGCCGCAGATGGAAATACTaGTCGTCAGGGAAGATCTGTCCCAGGTTGACGAAG | + |
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Preference number: 6 (lower is better) Translates to: CWATPRCRRWKY*SSGKICPRLTK Trigger: CTTCGTCAACCTGGGACAGATCTTCCCTGACGACCAGTATTTCCATCTGCGGCACCGGGGTGTGGCCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS CCA 72 bp | CAGCGCACCTTGGGATCTTTCTTCAGTCGTAGACGATaGCCCCAGTGTGGAGTCAGGGACTGCTGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: QRTLGSFFSRRR*PQCGVRDCWAT Trigger: TGTGGCCCAGCAGTCCCTGACTCCACACTGGGGCCATCGTCTACGACTGAAGAAAGATCCCAAGGTGCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS CAA 72 bp | CTAGCATTGAAGGCCACACCGGCACCACAGAAACCGTaGTTAGCTGTGGCAGACACCTCCCCAGCACAGCGC | + |
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Preference number: 6 (lower is better) Translates to: LALKATPAPQKP*LAVADTSPAQR Trigger: GCGCTGTGCTGGGGAGGTGTCTGCCACAGCTAACAACGGTTTCTGTGGTGCCGGTGTGGCCTTCAATGCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
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| CDS GCA 72 bp | ACCACCAGGGAGCGTTTCACCCGGCGCCTCAAAGTCTaGTGCTCAAACCAGCGCACCTTGGGATCTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TTRERFTRRLKV*CSNQRTLGSFF Trigger: GAAGAAAGATCCCAAGGTGCGCTGGTTTGAGCAGCAGACTTTGAGGCGCCGGGTGAAACGCTCCCTGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS CAA 72 bp | CGGCGCCTCAAAGTCTGCTGCTCAAACCAGCGCACCTaGGGATCTTTCTTCAGTCGTAGACGATGGCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RRLKVCCSNQRT*GSFFSRRRWPQ Trigger: CTGGGGCCATCGTCTACGACTGAAGAAAGATCCCAAGGTGCGCTGGTTTGAGCAGCAGACTTTGAGGCGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS CAA 90 bp | CCTCCAATTCTAGCATTGAAGGCCACACCGGCACCACAGAAACCGTaGTTAGCTGTGGCAGACACCTCCCCAGCACAGCGCGTTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: PPILALKATPAPQKP*LAVADTSPAQRVPC Trigger: ACATGGAACGCGCTGTGCTGGGGAGGTGTCTGCCACAGCTAACAACGGTTTCTGTGGTGCCGGTGTGGCCTTCAATGCTAGAATTGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 |
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| CDS CAA 90 bp | TTTCCCGAGGCCCAGATGAACAGTGTACCCAGCCCTTGGCGGCCCTaGGTTACACCACGCCTGAAGGCCTCCTCCAATTCTAGCATTGAA | + |
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Preference number: 6 (lower is better) Translates to: FPEAQMNSVPSPWRP*VTPRLKASSNSSIE Trigger: TTCAATGCTAGAATTGGAGGAGGCCTTCAGGCGTGGTGTAACCAAGGGCCGCCAAGGGCTGGGTACACTGTTCATCTGGGCCTCGGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128653.8 |
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| CDS CCA 72 bp | GGCGCCTCAAAGTCTGCTGCTCAAACCAGCGCACCTTaGGATCTTTCTTCAGTCGTAGACGATGGCCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GASKSAAQTSAP*DLSSVVDDGPS Trigger: ACTGGGGCCATCGTCTACGACTGAAGAAAGATCCCAAGGTGCGCTGGTTTGAGCAGCAGACTTTGAGGCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS TCA 72 bp | GGAAATACTGGTCGTCAGGGAAGATCTGTCCCAGGTTaGCGAAGCCAAATTTACGGGCCAGGCGCTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: GNTGRQGRSVPG*RSQIYGPGAQL Trigger: AAGCTGAGCGCCTGGCCCGTAAATTTGGCTTCGTCAACCTGGGACAGATCTTCCCTGACGACCAGTATTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS CAA 72 bp | TGGAAATACTGGTCGTCAGGGAAGATCTGTCCCAGGTaGACGAAGCCAAATTTACGGGCCAGGCGCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: WKYWSSGKICPR*TKPNLRARRSA Trigger: AGCTGAGCGCCTGGCCCGTAAATTTGGCTTCGTCAACCTGGGACAGATCTTCCCTGACGACCAGTATTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS CAA 72 bp | CGGCCGGTCAGTCCCTGGTTCCAAGCCTTTAGGATGTaGAGATCTTGTTGTATCTCCTTGTTCATGTACCAC | + |
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Preference number: 6 (lower is better) Translates to: RPVSPWFQAFRM*RSCCISLFMYH Trigger: GTGGTACATGAACAAGGAGATACAACAAGATCTCAACATCCTAAAGGCTTGGAACCAGGGACTGACCGGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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| CDS TCA 72 bp | GGCCGGTCAGTCCCTGGTTCCAAGCCTTTAGGATGTTaGGATCTTGTTGTATCTCCTTGTTCATGTACCACT | + |
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Preference number: 6 (lower is better) Translates to: GRSVPGSKPLGC*DLVVSPCSCTT Trigger: AGTGGTACATGAACAAGGAGATACAACAAGATCTCAACATCCTAAAGGCTTGGAACCAGGGACTGACCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020340.15 ENSMUST00000128653.8 ENSMUST00000135071.2 |
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