Pregenerated sensors for PCSK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027419Ensembl transcript IDs: ENSMUST00000028905.10
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATTGCTTGTGTCGGGGGTAACAGGAATTGCTGGGTGGCTGGTGGCTaGCAGAACTGTGGAGCAAGGAGAGGCAGAGACGGGGAGGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: IACVGGNRNCWVAGG*QNCGARRGRDGEEG Trigger: CCCTTCCTCCCCGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCCGACACAAGCAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR CCA 90 bp | ACCAGGCTGGGATTGCTTGTGTCGGGGGTAACAGGAATTGCTGGGTaGCTGGTGGCTGCCAGAACTGTGGAGCAAGGAGAGGCAGAGACG | + |
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Preference number: 1 (lower is better) Translates to: TRLGLLVSGVTGIAG*LVAARTVEQGEAET Trigger: CGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCCGACACAAGCAATCCCAGCCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 90 bp | TTGGCTGCTCCAGTGGGTCCAGTCCCAGTGAAGAGCAGTAGCTGGTaGCAGAAGAGCCATGTGTTTCCATTTTATGTCATCCTGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LAAPVGPVPVKSSSW*QKSHVFPFYVILAE Trigger: CTCTGCCAGGATGACATAAAATGGAAACACATGGCTCTTCTGTCACCAGCTACTGCTCTTCACTGGGACTGGACCCACTGGAGCAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 90 bp | AAGAGATTGTCTCTTGCTTCCCTTCTGGCTTCGAGTTATGGGGAATaGGGTGGCATGGGCCCCTCTCCATGCAACAAGCTTCTAGCAACT | + |
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Preference number: 1 (lower is better) Translates to: KRLSLASLLASSYGE*GGMGPSPCNKLLAT Trigger: AGTTGCTAGAAGCTTGTTGCATGGAGAGGGGCCCATGCCACCTCATTCCCCATAACTCGAAGCCAGAAGGGAAGCAAGAGACAATCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR CCA 90 bp | TTTAAACTTCCTCAGCCTGTCCAGTATTTGGGCTTCAGGGCTCCCTaGGGGACCACATCTTTTCTCATCAGGCACCTCAGTTTACATCCC | + |
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Preference number: 1 (lower is better) Translates to: FKLPQPVQYLGFRAP*GTTSFLIRHLSLHP Trigger: GGGATGTAAACTGAGGTGCCTGATGAGAAAAGATGTGGTCCCCCAGGGAGCCCTGAAGCCCAAATACTGGACAGGCTGAGGAAGTTTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 90 bp | TACAGAGAGCTTCAAAATTACAGAGGTGTCATAAATGGGAAGAGATaGACAGACATTTCACCTGAATCTCTACCGGCCTTCTACTCAGCC | + |
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Preference number: 1 (lower is better) Translates to: YRELQNYRGVINGKR*TDISPESLPAFYSA Trigger: GGCTGAGTAGAAGGCCGGTAGAGATTCAGGTGAAATGTCTGTTCATCTCTTCCCATTTATGACACCTCTGTAATTTTGAAGCTCTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR CCA 90 bp | TCAGCATCTCAGCTGAGGCCACGAATATTCTTGAGTCACCATGTGTaGCTTTTTAGATGCATTCTCTTCTCTTCTCAGATAGGAAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: SASQLRPRIFLSHHV*LFRCILFSSQIGKE Trigger: TTCTTTTCCTATCTGAGAAGAGAAGAGAATGCATCTAAAAAGCCACACATGGTGACTCAAGAATATTCGTGGCCTCAGCTGAGATGCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR GCA 90 bp | ATGCTAGAGCTGTGGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATGGGGGTAACAGGAATTaGTGGGTGGCTGGTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: MLELWSSLSISISAEATNGGNRN*WVAGGC Trigger: GCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCC...ATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CCA 90 bp | ATGCTAGAGCTGTGGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATTTGCTGGGTGGCTGGTaGCTGCCAGAACTGTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: MLELWSSLSISISAEATNLLGGW*LPELWS Trigger: GCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAA...ATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCGAATTGCTGGGTGGCTaGTGGCTGCCAGAACTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GDKRNERSFPEFSPKVAPELLGG*WLPELW Trigger: CCACAGTTCTGGCAGCCACCAGCCACCCAGCAATTC...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CCA 90 bp | CAGAAGAGCCATGTGTTTCCATTTTATGTCATCCTGGCAGAGCAGAGGGGACACAGCTTGAGACCAGGCTaGGATTGCTTGTGTCGGGGG | + |
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Preference number: 2 (lower is better) Translates to: QKSHVFPFYVILAEQRGHSLRPG*DCLCRG Trigger: CCCCCGACACAAGCAATCCCAGCCTGGTCTCAAGCT...GTGTCCCCTCTGCTCTGCCAGGATGACATAAAATGGAAACACATGGCTCTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCGGGAATGAGGTGGCATaGGCCCCTCTCCATGCAACA | + |
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Preference number: 2 (lower is better) Translates to: GDKRNERSFPEFSPKVAPGNEVA*APLHAT Trigger: TGTTGCATGGAGAGGGGCCCATGCCACCTCATTCCC...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR TCA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGACAGCGAGCAAAGCTTaGGACCAGGCTGGGATTGCT | + |
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Preference number: 2 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLTASKA*DQAGIA Trigger: AGCAATCCCAGCCTGGTCTCAAGCTTTGCTCGCTGT...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR GCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCTCATGCCTTCTGATGTaGCCCCTTCATCCACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: GDKRNERSFPEFSPKVAPSCLLM*PLHPLA Trigger: GGCCAGTGGATGAAGGGGGCACATCAGAAGGCATGA...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CCA 90 bp | ATGCTAGAGCTGTGGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATACAGGAATTGCTGGGTaGCTGGTGGCTGCCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: MLELWSSLSISISAEATNTGIAG*LVAART Trigger: AGTTCTGGCAGCCACCAGCCACCCAGCAATTCCTGT...ATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGCTTCAGGGCTCCCTaGGGGACCACATCTTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPGFRAP*GTTSFL Trigger: GAGAAAAGATGTGGTCCCCCAGGGAGCCCTGAAGCC...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTTGGCTGCCAGAACTGTaGAGCAAGGAGAGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPWLPEL*SKERQR Trigger: TCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCA...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTAGGTAACAGGAATTGCTaGGTGGCTGGTGGCTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: GDAPISKIGKLLLARQQLGNRNC*VAGGCQ Trigger: CTGGCAGCCACCAGCCACCCAGCAATTCCTGTTACC...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR TCA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGGGCCACGAATATTCTTaGGTCACCATGTGTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLGHEYS*VTMCGF Trigger: AAAGCCACACATGGTGACTCAAGAATATTCGTGGCC...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR TCA 90 bp | CTTCTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTGCCCTGGTTGGTGTGGGTaGCACTGTCAAAACCAAATC | + |
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Preference number: 2 (lower is better) Translates to: LLATRGPHKYGNSCLLMCPGWCG*HCQNQI Trigger: GATTTGGTTTTGACAGTGTCACCCACACCAACCAGG...GCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTAGGGCAGAGCTTTCCTaGTTTCAAGTGCAGCACAAC | + |
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Preference number: 2 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPRAELS*FQVQHN Trigger: GTTGTGCTGCACTTGAAACCAGGAAAGCTCTGCCCT...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTAAGAGCAGTAGCTGGTaGCAGAAGAGCCATGTGTTT | + |
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Preference number: 2 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPKSSSW*QKSHVF Trigger: AAACACATGGCTCTTCTGTCACCAGCTACTGCTCTT...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR TCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCAGTGAAAATAATCATTaGCAGCGAGCAAAGCTTGAG | + |
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Preference number: 2 (lower is better) Translates to: GDKRNERSFPEFSPKVAPSENNH*QRAKLE Trigger: CTCAAGCTTTGCTCGCTGTCAATGATTATTTTCACT...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR GCA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGAACTTTCAAAGCTCGTaGCTTTTAAACTTCCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLNFQSS*LLNFLS Trigger: GCTGAGGAAGTTTAAAAGGCACGAGCTTTGAAAGTT...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR CAA 90 bp | GGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATATTCTaGAGTCACCATGTGTGGCTTTTTAGATGCATTCTCTTCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GVHSLSASQLRPRIF*SHHVWLFRCILFSS Trigger: AGAAGAGAAGAGAATGCATCTAAAAAGCCACACATGGTGACTCAAGAATATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR GCA 72 bp | GTCGGGGGTAACAGGAATTGCTGGGTGGCTGGTGGCTaGCAGAACTGTGGAGCAAGGAGAGGCAGAGACGGG | + |
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Preference number: 3 (lower is better) Translates to: VGGNRNCWVAGG*QNCGARRGRDG Trigger: CCCGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCCGAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 72 bp | CCTAGGGTGGGGAGAGGACCAGGGGACACTGAGATCTaGGTGGGAAGCCAATCCTTGGGCAGGCACTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: PRVGRGPGDTEI*VGSQSLGRHSK Trigger: CTTGGAGTGCCTGCCCAAGGATTGGCTTCCCACTCAGATCTCAGTGTCCCCTGGTCCTCTCCCCACCCTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR CCA 72 bp | GGGTGGGGAGAGGACCAGGGGACACTGAGATCTGAGTaGGAAGCCAATCCTTGGGCAGGCACTCCAAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: GWGEDQGTLRSE*EANPWAGTPSD Trigger: GTCACTTGGAGTGCCTGCCCAAGGATTGGCTTCCCACTCAGATCTCAGTGTCCCCTGGTCCTCTCCCCACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR GCA 72 bp | CAGGCTGGGATTGCTTGTGTCGGGGGTAACAGGAATTaGTGGGTGGCTGGTGGCTGCCAGAACTGTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: QAGIACVGGNRN*WVAGGCQNCGA Trigger: TGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCCGACACAAGCAATCCCAGCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR CCA 72 bp | CCTCAGCCTGTCCAGTATTTGGGCTTCAGGGCTCCCTaGGGGACCACATCTTTTCTCATCAGGCACCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: PQPVQYLGFRAP*GTTSFLIRHLS Trigger: ACTGAGGTGCCTGATGAGAAAAGATGTGGTCCCCCAGGGAGCCCTGAAGCCCAAATACTGGACAGGCTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 72 bp | GAGGCATTTTGGCTGCTCCAGTGGGTCCAGTCCCAGTaGAGAGCAGTAGCTGGTGACAGAAGAGCCATGTGT | + |
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Preference number: 3 (lower is better) Translates to: EAFWLLQWVQSQ*RAVAGDRRAMC Trigger: ACACATGGCTCTTCTGTCACCAGCTACTGCTCTTCACTGGGACTGGACCCACTGGAGCAGCCAAAATGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR CCA 72 bp | AATCCAAGCCACCCTCCAACCCCCATGCTAGAGCTGTaGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: NPSHPPTPMLEL*SSLSISISAEA Trigger: GGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCATGGGGGTTGGAGGGTGGCTTGGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR CCA 72 bp | TGCTTCCCTTCTGGCTTCGAGTTATGGGGAATGAGGTaGCATGGGCCCCTCTCCATGCAACAAGCTTCTAGC | + |
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Preference number: 3 (lower is better) Translates to: CFPSGFELWGMR*HGPLSMQQASS Trigger: GCTAGAAGCTTGTTGCATGGAGAGGGGCCCATGCCACCTCATTCCCCATAACTCGAAGCCAGAAGGGAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 72 bp | TCTCTTGCTTCCCTTCTGGCTTCGAGTTATGGGGAATaGGGTGGCATGGGCCCCTCTCCATGCAACAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: SLASLLASSYGE*GGMGPSPCNKL Trigger: AAGCTTGTTGCATGGAGAGGGGCCCATGCCACCTCATTCCCCATAACTCGAAGCCAGAAGGGAAGCAAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGAGCCATGTGTTTCCATTTTATGTCATCCTGGCAGAGCAGAGGGGACACGACAGCGAGCAAAGCTaGAGACCAGGCTGGGATTGC | + |
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Preference number: 3 (lower is better) Translates to: QKSHVFPFYVILAEQRGHDSEQS*RPGWDC Trigger: GCAATCCCAGCCTGGTCTCAAGCTTTGCTCGCTGTC...GTGTCCCCTCTGCTCTGCCAGGATGACATAAAATGGAAACACATGGCTCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR GCA 72 bp | GGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTaGCCCCTTCATCCACTGGCCCCTTCTCAAACAGTG | + |
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Preference number: 3 (lower is better) Translates to: GPHKYGNSCLLM*PLHPLAPSQTV Trigger: CACTGTTTGAGAAGGGGCCAGTGGATGAAGGGGGCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR GCA 72 bp | CTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATaGCTTCTGATGTGCCCCCTTCATCCACTGGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: LATRGPHKYGNS*LLMCPLHPLAP Trigger: AGGGGCCAGTGGATGAAGGGGGCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 72 bp | CCAGTGGGTCCAGTCCCAGTGAAGAGCAGTAGCTGGTaGCAGAAGAGCCATGTGTTTCCATTTTATGTCATC | + |
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Preference number: 3 (lower is better) Translates to: PVGPVPVKSSSW*QKSHVFPFYVI Trigger: GATGACATAAAATGGAAACACATGGCTCTTCTGTCACCAGCTACTGCTCTTCACTGGGACTGGACCCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CAA 90 bp | CAGAAGAGCCATGTGTTTCCATTTTATGTCATCCTGGCAGAGCAGAGGGGACACAGGCCACGAATATTCTaGAGTCACCATGTGTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: QKSHVFPFYVILAEQRGHRPRIF*SHHVWL Trigger: AAGCCACACATGGTGACTCAAGAATATTCGTGGCCT...GTGTCCCCTCTGCTCTGCCAGGATGACATAAAATGGAAACACATGGCTCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR-3UTR CAA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCACTCCAGTGATAGTTTaGGGAAATCAAAGCCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: GDKRNERSFPEFSPKVAPTPVIV*GNQSPG Trigger: ACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGT...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 72 bp | ACATCTTTTCTCATCAGGCACCTCAGTTTACATCCCTaGCTAGTCTTGCTTAATCCAAGCCACCCTCCAACC | + |
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Preference number: 3 (lower is better) Translates to: TSFLIRHLSLHP*LVLLNPSHPPT Trigger: GGTTGGAGGGTGGCTTGGATTAAGCAAGACTAGTCAGGGATGTAAACTGAGGTGCCTGATGAGAAAAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 72 bp | ATTGGTAAACTGCTCTTAGCCAGACAGCAGCTAGATTaGCCTGGTAGTTTCTCTCTTGGATGGCTGTGTAAA | + |
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Preference number: 3 (lower is better) Translates to: IGKLLLARQQLD*PGSFSLGWLCK Trigger: TTTACACAGCCATCCAAGAGAGAAACTACCAGGTCAATCTAGCTGCTGTCTGGCTAAGAGCAGTTTACCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR GCA 72 bp | ACACCAGTGAAATTACAACTTGAGGGAGGGAGATATTaGACTCCAGTGATAGTTTTGGGAAATCAAAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: TPVKLQLEGGRY*TPVIVLGNQSP Trigger: AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAGTTGTAATTTCACTGGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR CCA 72 bp | CAGCTGAGGCCACGAATATTCTTGAGTCACCATGTGTaGCTTTTTAGATGCATTCTCTTCTCTTCTCAGATA | + |
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Preference number: 3 (lower is better) Translates to: QLRPRIFLSHHV*LFRCILFSSQI Trigger: TATCTGAGAAGAGAAGAGAATGCATCTAAAAAGCCACACATGGTGACTCAAGAATATTCGTGGCCTCAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 72 bp | CTTCAAAATTACAGAGGTGTCATAAATGGGAAGAGATaGACAGACATTTCACCTGAATCTCTACCGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LQNYRGVINGKR*TDISPESLPAF Trigger: GAAGGCCGGTAGAGATTCAGGTGAAATGTCTGTTCATCTCTTCCCATTTATGACACCTCTGTAATTTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| 3UTR TCA 72 bp | GACTCATTTCTCCAAAACACCAGTGAAATTACAACTTaGGGGAGGGAGATATTGCACTCCAGTGATAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: DSFLQNTSEITT*GREILHSSDSF Trigger: AAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAGTTGTAATTTCACTGGTGTTTTGGAGAAATGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS-3UTR TCA 90 bp | CTGGGATTGCTTGTGTCGGGGGTAACAGGAATTGCTGGGTGGCTGGTGGCTGCCCCATGGCCTGGAGTGTaGGCTCTCGGGGCCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: LGLLVSGVTGIAGWLVAAPWPGV*ALGAHQ Trigger: TTGATGGGCCCCGAGAGCTCACACTCCAGGCCATGG...GGCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCCGACACAAGCAATCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS-3UTR CCA 90 bp | CTGGGATTGCTTGTGTCGGGGGTAACAGGAATTGCTGGGTGGCTGGTGGCTGCCTGGAGTCGTCGTCTCTaGGACGCCGGCTCAGCAAAA | + |
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Preference number: 4 (lower is better) Translates to: LGLLVSGVTGIAGWLVAAWSRRL*DAGSAK Trigger: TTTTGCTGAGCCGGCGTCCCAGAGACGACGACTCCA...GGCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCCGACACAAGCAATCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS-3UTR TCA 90 bp | ATTGCTGGGTGGCTGGTGGCTGCCAGAACTGTGGAGCAAGGAGAGGCAGAGACGGGTTCCGCTTGGAGGTaGGCACAGTCAGATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IAGWLVAARTVEQGEAETGSAWR*AQSDVA Trigger: TGCAACATCTGACTGTGCTCACCTCCAAGCGGAACC...CGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | ATTGCTGGGTGGCTGGTGGCTGCCAGAACTGTGGAGCAAGGAGAGGCAGAGACGTCTTCCTCCAGCTCCTaGTTCTTGGACATGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IAGWLVAARTVEQGEAETSSSSS*FLDMAS Trigger: GCTGGCCATGTCCAAGAAGCAGGAGCTGGAGGAAGA...CGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR TCA 90 bp | CTGGGATTGCTTGTGTCGGGGGTAACAGGAATTGCTGGGTGGCTGGTGGCTGCCTCTTCCTCCCATTGCTaGAGGTGGATGCTAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLLVSGVTGIAGWLVAASSSHC*RWMLRW Trigger: CCACCTTAGCATCCACCTTCAGCAATGGGAGGAAGA...GGCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCCGACACAAGCAATCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CCTGTCCAGTATTTGGGCTTCAGGGCTCCCTGGGGGACCACATCTTTTCTCATCAGGCCCACACATAGATaGTGCCTTTGCCCCCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: PVQYLGFRAPWGTTSFLIRPTHR*CLCPHG Trigger: GCCGTGGGGGCAAAGGCAGCATCTATGTGTGGGCCT...GATGAGAAAAGATGTGGTCCCCCAGGGAGCCCTGAAGCCCAAATACTGGACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGATTGCTTGTGTCGGGGGTAACAGGAATTGCTGGGTGGCTGGTGGCTGCCTTTCACCATGGCACCTaGATCAAGGACTCCGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLLVSGVTGIAGWLVAAFHHGT*IKDSVA Trigger: GGCTACGGAGTCCTTGATGCAGGTGCCATGGTGAAA...GGCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCCGACACAAGCAATCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAGCCATGTGTTTCCATTTTATGTCATCCTGGCAGAGCAGAGGGGACACCCGGCCGCCTTCCACTaGGATCCACAACCGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKSHVFPFYVILAEQRGHPAAFH*DPQPPS Trigger: GGAGGGCGGTTGTGGATCCCAGTGGAAGGCGGCCGG...GTGTCCCCTCTGCTCTGCCAGGATGACATAAAATGGAAACACATGGCTCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTCCAGTATTTGGGCTTCAGGGCTCCCTGGGGGACCACATCTTTTCTCATCGCCGGCTCAGCAAAATaGACTTGGTGCCCATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVQYLGFRAPWGTTSFLIAGSAK*TWCPLG Trigger: CCCCAATGGGCACCAAGTCCATTTTGCTGAGCCGGC...GATGAGAAAAGATGTGGTCCCCCAGGGAGCCCTGAAGCCCAAATACTGGACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR TCA 90 bp | ATTGCTGGGTGGCTGGTGGCTGCCAGAACTGTGGAGCAAGGAGAGGCAGAGACGAACTCCACAAGAAAATaGTTCGTGAAGACGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IAGWLVAARTVEQGEAETNSTRK*FVKTGL Trigger: GAGACCCGTCTTCACGAATCATTTTCTTGTGGAGTT...CGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | ATTGCTGGGTGGCTGGTGGCTGCCAGAACTGTGGAGCAAGGAGAGGCAGAGACGCTCCACAGATATTGTTaGTGGCTGCAGCAGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: IAGWLVAARTVEQGEAETLHRYC*WLQQKL Trigger: AAGTTTCTGCTGCAGCCAGCAACAATATCTGTGGAG...CGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGTGCAAACACGCCAGCTaGCTCCGGAGCAGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLCKHAS*LRSSCR Trigger: TCTGCAGCTGCTCCGGAGGCAGCTGGCGTGTTTGCA...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGATGGGGCGCTCTGTGTaGCGTGAAGCATCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLMGRSV*REASGS Trigger: GGACCCTGATGCTTCACGGCACACAGAGCGCCCCAT...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCCAACCCCTTCTGTGGTaGACTGCCCACAAACCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDKRNERSFPEFSPKVAPQPLLW*TAHKPQ Trigger: CTGGGGTTTGTGGGCAGTGCACCACAGAAGGGGTTG...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCCAGCAACCCCTTCTGTaGTGCACTGCCCACAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GDKRNERSFPEFSPKVAPQQPLL*CTAHKP Trigger: GGGTTTGTGGGCAGTGCACCACAGAAGGGGTTGCTG...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR TCA 90 bp | CCTGTCCAGTATTTGGGCTTCAGGGCTCCCTGGGGGACCACATCTTTTCTCATCAGGGGTCATTGCTGCTaGAGTCATAACTTGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVQYLGFRAPWGTTSFLIRGHCC*SHNLHQ Trigger: CTGATGCAAGTTATGACTTCAGCAGCAATGACCCCT...GATGAGAAAAGATGTGGTCCCCCAGGGAGCCCTGAAGCCCAAATACTGGACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | ATGCTAGAGCTGTGGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATGGGTCTCTCTCTAGCTaGCGCTTATGGTGTAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MLELWSSLSISISAEATNGSLSS*RLWCRL Trigger: CAGCCTACACCATAAGCGGCAGCTAGAGAGAGACCC...ATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCCAGCATCCGGATCCCTaGCACCTTGGAGTTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: GDKRNERSFPEFSPKVAPQHPDP*HLGVVC Trigger: GCATACAACTCCAAGGTGGCAGGGATCCGGATGCTG...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | ATGCTAGAGCTGTGGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATGCGCCATCTTTATCCTaGGGTCTCTCTCTAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MLELWSSLSISISAEATNAPSLS*GLSLAA Trigger: GGCAGCTAGAGAGAGACCCCAGGATAAAGATGGCGC...ATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGGGATCCCTGCCACCTTaGAGTTGTATGCTACGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLGSLPP*SCMLRR Trigger: TCGGCGTAGCATACAACTCCAAGGTGGCAGGGATCC...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR TCA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGTTGGGGAGGTCATGTTaGTGTTCAGGTCTCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLLGRSC*CSGLLS Trigger: GGAGAGGAGACCTGAACATCAACATGACCTCCCCAA...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR TCA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTAGCGCTCTGTGTGCCGTaGAGCATCAGGGTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDAPISKIGKLLLARQQLALCVP*SIRVHS Trigger: GGAATGGACCCTGATGCTTCACGGCACACAGAGCGC...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCGTGATACAGGCCTTCTaGAAAGGGGAGCTTTCGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GDKRNERSFPEFSPKVAPVIQAF*KGELSD Trigger: GTCCGAAAGCTCCCCTTTGCAGAAGGCCTGTATCAC...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | ATTGCTGGGTGGCTGGTGGCTGCCAGAACTGTGGAGCAAGGAGAGGCAGAGACGTCTTCTTTTGGCCTTTaGAAGCCCATTGTGATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IAGWLVAARTVEQGEAETSSFGL*KPIVIK Trigger: TTTTATCACAATGGGCTTGCAAAGGCCAAAAGAAGA...CGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTTGCCTCCGGAGCAGCTaGAGATGTCCCAGAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPCLRSS*RCPRVS Trigger: AGACACTCTGGGACATCTGCAGCTGCTCCGGAGGCA...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR TCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCGCCATCATTGATGGCTaGGTTGATGGAGATGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GDKRNERSFPEFSPKVAPAIIDG*VDGDGP Trigger: TGGACCATCTCCATCAACTCAGCCATCAATGATGGC...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CTTCTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTGCTCCAAAGCCGTGTTCTaGTGCAACTTGGCGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLATRGPHKYGNSCLLMCSKAVF*CNLASL Trigger: GAGGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGA...GCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCTGGAGATGGTCCACATaGTTGAAGCATAGCCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GDKRNERSFPEFSPKVAPWRWST*LKHSRH Trigger: GTGACGGCTATGCTTCAAGCATGTGGACCATCTCCA...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGGCAAAATGGACTTGGTaGCCATTGGGGAGGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLAKWTW*PLGRSC Trigger: ACATGACCTCCCCAATGGGCACCAAGTCCATTTTGC...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | ATGCTAGAGCTGTGGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATGGACTTGGTGCCCATTaGGGAGGTCATGTTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: MLELWSSLSISISAEATNGLGAH*GGHVDV Trigger: AACATCAACATGACCTCCCCAATGGGCACCAAGTCC...ATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTAAAGCCGTGTTCTGCTaGAACTTGGCGAGCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPKAVFC*NLASLF Trigger: GAAGAGGCTCGCCAAGTTGCAGCAGAACACGGCTTT...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGGCTTATGGTGTAGGCTaGGTCTTCTTTTGGCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLAYGVG*VFFWPL Trigger: CAAAGGCCAAAAGAAGACGCAGCCTACACCATAAGC...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTATGTTCTGCTGCAACTTaGCGAGCCTCTTCCTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GDAPISKIGKLLLARQQLCSAAT*RASSSP Trigger: CGGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACA...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTGCTCTGTCATAAAGGGCTaGTCCAGCATCCGGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLATRGPHKYGNSCLLMCSVIKG*SSIRIP Trigger: AGGGATCCGGATGCTGGACCAGCCCTTTATGACAGA...GCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTATGTCAAAGCCCACCTTaGAGTCGTCGTCTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GDAPISKIGKLLLARQQLCQSPP*SRRLWD Trigger: GTCCCAGAGACGACGACTCCAAGGTGGGCTTTGACA...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR TCA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTAAGGTGTGGGTGGTCATaGAAGGCCACTTGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDAPISKIGKLLLARQQLRCGWS*KATCQS Trigger: GCTTTGACAAGTGGCCTTTCATGACCACCCACACCT...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTCACCTTGGAGTTGTATaGTACGCCGACTCCACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPHLGVV*YADSTD Trigger: ATCTGTGGAGTCGGCGTAGCATACAACTCCAAGGTG...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCTTCCTTCCCCTCACATaGATTTGTTTTGAGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDKRNERSFPEFSPKVAPFLPLT*ICFEGQ Trigger: CTGACCCTCAAAACAAATGCATGTGAGGGGAAGGAA...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTGCTCTAGCTGCCGCTTATaGTGTAGGCTGCGTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLATRGPHKYGNSCLLMCSSCRL*CRLRLL Trigger: AAGAAGACGCAGCCTACACCATAAGCGGCAGCTAGA...GCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAGAAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTGCGTTGTAGGCCAGGTCTaGGTGGAGATAGTCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLATRGPHKYGNSCLLMCVVGQV*VEIVNS Trigger: GGAATTGACTATCTCCACCCAGACCTGGCCTACAAC...GCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAGAAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | ATGCTAGAGCTGTGGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATCACAGATATTGTTGCTaGCTGCAGCAGAAACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MLELWSSLSISISAEATNHRYCC*LQQKLL Trigger: GAGAAGTTTCTGCTGCAGCCAGCAACAATATCTGTG...ATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | CTTCTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTGCGAGCCTCCCACACAATaGAATCTCTCCGGAACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLATRGPHKYGNSCLLMCEPPTQ*NLSGTV Trigger: AACTGTTCCGGAGAGATTCCATTGTGTGGGAGGCTC...GCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR TCA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTACAAGAAAATGATTCGTaGAGACGGGTCTCTCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDAPISKIGKLLLARQQLQENDS*RRVSRQ Trigger: CTGCCGAGAGACCCGTCTTCACGAATCATTTTCTTG...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CTTCTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTGCAGCACAGTCAGATGTTaGATGTCTCTCCAGGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLATRGPHKYGNSCLLMCSTVRC*MSLQVR Trigger: TCTGACCTGGAGAGACATGCAACATCTGACTGTGCT...GCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAGAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTTTTCTCAGGATACTTTaGAGGCTTCTCTCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPFLRIL*RLLSTA Trigger: GGCTGTGGAGAGAAGCCTGCAAAGTATCCTGAGAAA...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CCA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTATCAGCAAAATGGACTTaGTGCCCATTGGGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDAPISKIGKLLLARQQLSAKWT*CPLGRS Trigger: TGACCTCCCCAATGGGCACCAAGTCCATTTTGCTGA...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| 3UTR CAA 72 bp | TTTTATGTCATCCTGGCAGAGCAGAGGGGACACGATTaGGGTATAGGGATTAAACTTTCAAAGCTCGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FYVILAEQRGHD*GIGIKLSKLVP Trigger: AGGCACGAGCTTTGAAAGTTTAATCCCTATACCCAAATCGTGTCCCCTCTGCTCTGCCAGGATGACATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| 3UTR CAA 72 bp | TCTCTATCAGCATCTCAGCTGAGGCCACGAATATTCTaGAGTCACCATGTGTGGCTTTTTAGATGCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSASQLRPRIF*SHHVWLFRCIL Trigger: GAGAATGCATCTAAAAAGCCACACATGGTGACTCAAGAATATTCGTGGCCTCAGCTGAGATGCTGATAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 90 bp | TGCAGTCATCGTAGCTGCCACCGTCCCCAGAGGCCCACACATAGATaGTGCCTTTGCCCCCACGGCCCTTGTTCACGCCATCAGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: CSHRSCHRPQRPTHR*CLCPHGPCSRHQPW Trigger: CCATGGCTGATGGCGTGAACAAGGGCCGTGGGGGCAAAGGCAGCATCTATGTGTGGGCCTCTGGGGACGGTGGCAGCTACGATGACTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS CCA 90 bp | CTGCCTTTGCCCCCACGGCCCTTGTTCACGCCATCAGCCATGGCCTaGAGTGTGAGCTCTCGGGGCCCATCAACCGTCTTCCCATTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPLPPRPLFTPSAMA*SVSSRGPSTVFPLS Trigger: AGACAATGGGAAGACGGTTGATGGGCCCCGAGAGCTCACACTCCAGGCCATGGCTGATGGCGTGAACAAGGGCCGTGGGGGCAAAGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | ATTGCTGGGTGGCTGGTGGCTGCCAGAACTGTGGAGCAAGGAGAGGCAGAGACGTCAACCGTCTTCCCATaGTCTGTGGGGCCCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IAGWLVAARTVEQGEAETSTVFP*SVGPQL Trigger: AAGCTGGGGCCCCACAGACAATGGGAAGACGGTTGA...CGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CTGGGATTGCTTGTGTCGGGGGTAACAGGAATTGCTGGGTGGCTGGTGGCTGCCTCCAGCTCCTGCTTCTaGGACATGGCCAGCTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LGLLVSGVTGIAGWLVAASSSCF*DMASLD Trigger: GTCTAAGCTGGCCATGTCCAAGAAGCAGGAGCTGGA...GGCAGCCACCAGCCACCCAGCAATTCCTGTTACCCCCGACACAAGCAATCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 90 bp | TCCACATGCTTGAAGCATAGCCGTCACAGTTGCAGTCATCGTAGCTaGCACCGTCCCCAGAGGCCCACACATAGATGCTGCCTTTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: STCLKHSRHSCSHRS*HRPQRPTHRCCLCP Trigger: GGGGCAAAGGCAGCATCTATGTGTGGGCCTCTGGGGACGGTGGCAGCTACGATGACTGCAACTGTGACGGCTATGCTTCAAGCATGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | ATTGCTGGGTGGCTGGTGGCTGCCAGAACTGTGGAGCAAGGAGAGGCAGAGACGTTCCTCTTCCTCCCATaGCTGAAGGTGGATGCTAAG | + |
|
Preference number: 5 (lower is better) Translates to: IAGWLVAARTVEQGEAETFLFLP*LKVDAK Trigger: CTTAGCATCCACCTTCAGCAATGGGAGGAAGAGGAA...CGTCTCTGCCTCTCCTTGCTCCACAGTTCTGGCAGCCACCAGCCACCCAGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 90 bp | GCCTTCTGCAAAGGGGAGCTTTCGGACTCCAAAGCCGTGTTCTGCTaGAACTTGGCGAGCCTCTTCCTCTCCGTCTTTATGCAACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AFCKGELSDSKAVFC*NLASLFLSVFMQLH Trigger: GTGGAGTTGCATAAAGACGGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTCCCCTTTGCAGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 90 bp | CAGGCCTTCTGCAAAGGGGAGCTTTCGGACTCCAAAGCCGTGTTCTaGTGCAACTTGGCGAGCCTCTTCCTCTCCGTCTTTATGCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: QAFCKGELSDSKAVF*CNLASLFLSVFMQL Trigger: GAGTTGCATAAAGACGGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTCCCCTTTGCAGAAGGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 90 bp | ACTGGTAATCCCTCACCACCTGATCGATGTATGGGGCGCTCTGTGTaGCGTGAAGCATCAGGGTCCATTCCTTCAGCAACCCCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGNPSPPDRCMGRSV*REASGSIPSATPSV Trigger: CACAGAAGGGGTTGCTGAAGGAATGGACCCTGATGCTTCACGGCACACAGAGCGCCCCATACATCGATCAGGTGGTGAGGGATTACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS CCA 90 bp | CATGGCCAGCTTAGACTGGTAATCCCTCACCACCTGATCGATGTATaGGGCGCTCTGTGTGCCGTGAAGCATCAGGGTCCATTCCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HGQLRLVIPHHLIDV*GALCAVKHQGPFLQ Trigger: CTGAAGGAATGGACCCTGATGCTTCACGGCACACAGAGCGCCCCATACATCGATCAGGTGGTGAGGGATTACCAGTCTAAGCTGGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS TCA 90 bp | GTCGCCACTGATGAACCTCATCATGAAGCTGGTTCCGCTTGGAGGTaGGCACAGTCAGATGTTGCATGTCTCTCCAGGTCAGATCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VATDEPHHEAGSAWR*AQSDVACLSRSDPG Trigger: ACCTGGATCTGACCTGGAGAGACATGCAACATCTGACTGTGCTCACCTCCAAGCGGAACCAGCTTCATGATGAGGTTCATCAGTGGCGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 90 bp | CCTTCTTGTTGCAGCGCCATCTTTATCCTGGGGTCTCTCTCTAGCTaGCGCTTATGGTGTAGGCTGCGTCTTCTTTTGGCCTTTGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSCCSAIFILGSLSS*RLWCRLRLLLAFAS Trigger: GCTTGCAAAGGCCAAAAGAAGACGCAGCCTACACCATAAGCGGCAGCTAGAGAGAGACCCCAGGATAAAGATGGCGCTGCAACAAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CAGAAGAGCCATGTGTTTCCATTTTATGTCATCCTGGCAGAGCAGAGGGGACACGACTGTGATGACAGCTaGGACGTGCTCCAGGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QKSHVFPFYVILAEQRGHDCDDS*DVLQVA Trigger: CGCTACCTGGAGCACGTCCAAGCTGTCATCACAGTC...GTGTCCCCTCTGCTCTGCCAGGATGACATAAAATGGAAACACATGGCTCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 90 bp | CAGGCTTCGGCCACGTTCAAGTCTAGCCCAGGAGTTCCATCGGCTTaGCCAGTGTTGAACAGGTACCATTGCTTTGTAAAGAGAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: QASATFKSSPGVPSA*PVLNRYHCFVKRGS Trigger: TGATCCTCTCTTTACAAAGCAATGGTACCTGTTCAACACTGGGCAAGCCGATGGAACTCCTGGGCTAGACTTGAACGTGGCCGAAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS CCA 90 bp | GCAAAGGGGAGCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTTaGCGAGCCTCTTCCTCTCCGTCTTTATGCAACTCCACAAGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AKGSFRTPKPCSAAT*RASSSPSLCNSTRK Trigger: TTTTCTTGTGGAGTTGCATAAAGACGGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTCCCCTTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTCGGATCCCTGCCACCTaGGAGTTGTATGCTACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPRIPAT*ELYATP Trigger: CGGCGTAGCATACAACTCCAAGGTGGCAGGGATCCG...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGCTCAGCAAAATGGACTaGGTGCCCATTGGGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLLSKMD*VPIGEV Trigger: GACCTCCCCAATGGGCACCAAGTCCATTTTGCTGAG...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CTTCTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTGCGTGTTCTGCTGCAACTaGGCGAGCCTCTTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLATRGPHKYGNSCLLMCVFCCN*ASLFLS Trigger: GGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACAC...GCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGAGGCTGCGTCTTCTTTaGGCCTTTGCAAGCCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLRLRLL*AFASPL Trigger: CAATGGGCTTGCAAAGGCCAAAAGAAGACGCAGCCT...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | ATGCTAGAGCTGTGGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATGAGCACAGTCAGATGTaGCATGTCTCTCCAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: MLELWSSLSISISAEATNEHSQM*HVSPGQ Trigger: CTGACCTGGAGAGACATGCAACATCTGACTGTGCTC...ATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS TCA 90 bp | TGGCGAGCCTCTTCCTCTCCGTCTTTATGCAACTCCACAAGAAAATaGTTCGTGAAGACGGGTCTCTCGGCAGACGCAAAAACCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: WRASSSPSLCNSTRK*FVKTGLSADAKTIT Trigger: TGTGATGGTTTTTGCGTCTGCCGAGAGACCCGTCTTCACGAATCATTTTCTTGTGGAGTTGCATAAAGACGGAGAGGAAGAGGCTCGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS TCA 90 bp | ACCAGTCATCTGTGTATCGAGGGTATGGGTAGGGGTCATTGCTGCTaGAGTCATAACTTGCATCAGCGTTGTAGTTGTAGGCCAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSHLCIEGMGRGHCC*SHNLHQRCSCRPGL Trigger: CAGACCTGGCCTACAACTACAACGCTGATGCAAGTTATGACTTCAGCAGCAATGACCCCTACCCATACCCTCGATACACAGATGACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS CCA 90 bp | GGTCTCTCTCTAGCTGCCGCTTATGGTGTAGGCTGCGTCTTCTTTTaGCCTTTGCAAGCCCATTGTGATAAAAGTGATACAGGCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GLSLAAAYGVGCVFF*PLQAHCDKSDTGLL Trigger: CAGAAGGCCTGTATCACTTTTATCACAATGGGCTTGCAAAGGCCAAAAGAAGACGCAGCCTACACCATAAGCGGCAGCTAGAGAGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CCTGTCCAGTATTTGGGCTTCAGGGCTCCCTGGGGGACCACATCTTTTCTCATCGTCTTCTTTTGGCCTTaGCAAGCCCATTGTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVQYLGFRAPWGTTSFLIVFFWP*QAHCDK Trigger: TTTATCACAATGGGCTTGCAAAGGCCAAAAGAAGAC...GATGAGAAAAGATGTGGTCCCCCAGGGAGCCCTGAAGCCCAAATACTGGACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTACCTCTCCTGGTCGCGTaGACTGTGATGACAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDAPISKIGKLLLARQQLPLLVA*TVMTAW Trigger: CCAAGCTGTCATCACAGTCAACGCGACCAGGAGAGG...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 90 bp | CTCCGGAACAGTTTTCCAGTCTTTAGCCATTTTCACCATGGCACCTaGATCAAGGACTCCGTAGCCAAAGAGGTGATTAAATTCCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRNSFPVFSHFHHGT*IKDSVAKEVIKFQA Trigger: GGCCTGGAATTTAATCACCTCTTTGGCTACGGAGTCCTTGATGCAGGTGCCATGGTGAAAATGGCTAAAGACTGGAAAACTGTTCCGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CAGAAGAGCCATGTGTTTCCATTTTATGTCATCCTGGCAGAGCAGAGGGGACACACTCCACAGATATTGTaGCTGGCTGCAGCAGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: QKSHVFPFYVILAEQRGHTPQIL*LAAAET Trigger: AGTTTCTGCTGCAGCCAGCAACAATATCTGTGGAGT...GTGTCCCCTCTGCTCTGCCAGGATGACATAAAATGGAAACACATGGCTCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTCCGACTCCACAGATATaGTTGCTGGCTGCAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPPTPQI*LLAAAE Trigger: TTCTGCTGCAGCCAGCAACAATATCTGTGGAGTCGG...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTATTGTCAAAGCCCACCTaGGAGTCGTCGTCTCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GDAPISKIGKLLLARQQLLSKPT*ESSSLG Trigger: TCCCAGAGACGACGACTCCAAGGTGGGCTTTGACAA...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CTTGAGGGAGGGAGATATTGCACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGTCATGAAAGGCCACTaGTCAAAGCCCACCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LEGGRYCTPVIVLGNQSPVMKGH*SKPTLE Trigger: CTCCAAGGTGGGCTTTGACAAGTGGCCTTTCATGAC...AGGGCTTTGATTTCCCAAAACTATCACTGGAGTGCAATATCTCCCTCCCTCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGGTCAAATCCTTCTTGTaGCAGCGCCATCTTTATCCT | + |
|
Preference number: 5 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLVKSFL*QRHLYP Trigger: AGGATAAAGATGGCGCTGCAACAAGAAGGATTTGAC...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | GGGGACAAAAGGAATGAAAGAAGCTTCCCAGAATTCTCTCCTAAAGTCGCCCCCACGGTCAAATCCTTCTaGTTGCAGCGCCATCTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: GDKRNERSFPEFSPKVAPTVKSF*LQRHLY Trigger: ATAAAGATGGCGCTGCAACAAGAAGGATTTGACCGT...GGGGGCGACTTTAGGAGAGAATTCTGGGAAGCTTCTTTCATTCCTTTTGTCCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CACTCCAGTGATAGTTTTGGGAAATCAAAGCCCTGGTTGGTGTGGGTGACACTGTGTCTCAGAGTACAGTaGCCATACAAGTCTGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HSSDSFGKSKPWLVWVTLCLRVQ*PYKSVV Trigger: TACCACAGACTTGTATGGCAACTGTACTCTGAGACA...CAGTGTCACCCACACCAACCAGGGCTTTGATTTCCCAAAACTATCACTGGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | CTTCTAGCAACTAGAGGTCCACATAAGTATGGCAACTCATGCCTTCTGATGTGCCTTTCTCAGGATACTTaGCAGGCTTCTCTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLATRGPHKYGNSCLLMCLSQDT*QASLHS Trigger: GCTGTGGAGAGAAGCCTGCAAAGTATCCTGAGAAAG...GCACATCAGAAGGCATGAGTTGCCATACTTATGTGGACCTCTAGTTGCTAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | ATGCTAGAGCTGTGGAGTTCACTCTCTATCAGCATCTCAGCTGAGGCCACGAATAGAGGATCATTCATGTaGATGTCAATCTCATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: MLELWSSLSISISAEATNRGSFM*MSISLM Trigger: CATCAATGAGATTGACATCAACATGAATGATCCTCT...ATTCGTGGCCTCAGCTGAGATGCTGATAGAGAGTGAACTCCACAGCTCTAGCAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS-3UTR CAA 90 bp | GGGGATGCTCCTATTTCTAAAATTGGTAAACTGCTCTTAGCCAGACAGCAGCTAGTTGAACAGGTACCATaGCTTTGTAAAGAGAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GDAPISKIGKLLLARQQLVEQVP*LCKERI Trigger: GATCCTCTCTTTACAAAGCAATGGTACCTGTTCAAC...TAGCTGCTGTCTGGCTAAGAGCAGTTTACCAATTTTAGAAATAGGAGCATCCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS CCA 72 bp | CCCCCACGGCCCTTGTTCACGCCATCAGCCATGGCCTaGAGTGTGAGCTCTCGGGGCCCATCAACCGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PPRPLFTPSAMA*SVSSRGPSTVF Trigger: GAAGACGGTTGATGGGCCCCGAGAGCTCACACTCCAGGCCATGGCTGATGGCGTGAACAAGGGCCGTGGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 72 bp | CACCGTCCCCAGAGGCCCACACATAGATGCTGCCTTTaGCCCCACGGCCCTTGTTCACGCCATCAGCCATGG | + |
|
Preference number: 6 (lower is better) Translates to: HRPQRPTHRCCL*PHGPCSRHQPW Trigger: CCATGGCTGATGGCGTGAACAAGGGCCGTGGGGGCAAAGGCAGCATCTATGTGTGGGCCTCTGGGGACGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 72 bp | AGCTGCCACCGTCCCCAGAGGCCCACACATAGATGCTaGCTTTGCCCCCACGGCCCTTGTTCACGCCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: SCHRPQRPTHRC*LCPHGPCSRHQ Trigger: CTGATGGCGTGAACAAGGGCCGTGGGGGCAAAGGCAGCATCTATGTGTGGGCCTCTGGGGACGGTGGCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 72 bp | CGTAGCTGCCACCGTCCCCAGAGGCCCACACATAGATaGTGCCTTTGCCCCCACGGCCCTTGTTCACGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RSCHRPQRPTHR*CLCPHGPCSRH Trigger: ATGGCGTGAACAAGGGCCGTGGGGGCAAAGGCAGCATCTATGTGTGGGCCTCTGGGGACGGTGGCAGCTACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS TCA 72 bp | GGCCCTTGTTCACGCCATCAGCCATGGCCTGGAGTGTaGGCTCTCGGGGCCCATCAACCGTCTTCCCATTGT | + |
|
Preference number: 6 (lower is better) Translates to: GPCSRHQPWPGV*ALGAHQPSSHC Trigger: ACAATGGGAAGACGGTTGATGGGCCCCGAGAGCTCACACTCCAGGCCATGGCTGATGGCGTGAACAAGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 72 bp | CATCAGGGTCCATTCCTTCAGCAACCCCTTCTGTGGTaGACTGCCCACAAACCCCAGCTCCAGGGTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: HQGPFLQQPLLW*TAHKPQLQGPG Trigger: ACCTGGACCCTGGAGCTGGGGTTTGTGGGCAGTGCACCACAGAAGGGGTTGCTGAAGGAATGGACCCTGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS CCA 72 bp | GCCACTTGTCAAAGCCCACCTTGGAGTCGTCGTCTCTaGGACGCCGGCTCAGCAAAATGGACTTGGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ATCQSPPWSRRL*DAGSAKWTWCP Trigger: TGGGCACCAAGTCCATTTTGCTGAGCCGGCGTCCCAGAGACGACGACTCCAAGGTGGGCTTTGACAAGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS CAA 90 bp | CCCCAGGTGTGGGTGGTCATGAAAGGCCACTTGTCAAAGCCCACCTaGGAGTCGTCGTCTCTGGGACGCCGGCTCAGCAAAATGGACTTG | + |
|
Preference number: 6 (lower is better) Translates to: PQVWVVMKGHLSKPT*ESSSLGRRLSKMDL Trigger: CAAGTCCATTTTGCTGAGCCGGCGTCCCAGAGACGACGACTCCAAGGTGGGCTTTGACAAGTGGCCTTTCATGACCACCCACACCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 72 bp | AGATGGTCCACATGCTTGAAGCATAGCCGTCACAGTTaGAGTCATCGTAGCTGCCACCGTCCCCAGAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RWSTCLKHSRHS*SHRSCHRPQRP Trigger: GGGCCTCTGGGGACGGTGGCAGCTACGATGACTGCAACTGTGACGGCTATGCTTCAAGCATGTGGACCATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS GCA 72 bp | CCCTCACCACCTGATCGATGTATGGGGCGCTCTGTGTaGCGTGAAGCATCAGGGTCCATTCCTTCAGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: PSPPDRCMGRSV*REASGSIPSAT Trigger: GGTTGCTGAAGGAATGGACCCTGATGCTTCACGGCACACAGAGCGCCCCATACATCGATCAGGTGGTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
||
| CDS CAA 72 bp | TGGGTGGTCATGAAAGGCCACTTGTCAAAGCCCACCTaGGAGTCGTCGTCTCTGGGACGCCGGCTCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: WVVMKGHLSKPT*ESSSLGRRLSK Trigger: TTTGCTGAGCCGGCGTCCCAGAGACGACGACTCCAAGGTGGGCTTTGACAAGTGGCCTTTCATGACCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 90 bp | GCCTCCGGAGCAGCTGCAGATGTCCCAGAGTGTCTCAGAGTACAGTaGCCATACAAGTCTGTGGTAGCCACACCAGCCTCAGGATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ASGAAADVPECLRVQ*PYKSVVATPASGFL Trigger: GAGGAATCCTGAGGCTGGTGTGGCTACCACAGACTTGTATGGCAACTGTACTCTGAGACACTCTGGGACATCTGCAGCTGCTCCGGAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 90 bp | ACCTTGGAGTCGTCGTCTCTGGGACGCCGGCTCAGCAAAATGGACTaGGTGCCCATTGGGGAGGTCATGTTGATGTTCAGGTCTCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: TLESSSLGRRLSKMD*VPIGEVMLMFRSPL Trigger: GAGAGGAGACCTGAACATCAACATGACCTCCCCAATGGGCACCAAGTCCATTTTGCTGAGCCGGCGTCCCAGAGACGACGACTCCAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS GCA 72 bp | GTCCAGCATCCGGATCCCTGCCACCTTGGAGTTGTATaGTACGCCGACTCCACAGATATTGTTGCTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VQHPDPCHLGVV*YADSTDIVAGC Trigger: GCAGCCAGCAACAATATCTGTGGAGTCGGCGTAGCATACAACTCCAAGGTGGCAGGGATCCGGATGCTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 72 bp | GGCTGGTCCAGCATCCGGATCCCTGCCACCTTGGAGTaGTATGCTACGCCGACTCCACAGATATTGTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: GWSSIRIPATLE*YATPTPQILLL Trigger: CAGCAACAATATCTGTGGAGTCGGCGTAGCATACAACTCCAAGGTGGCAGGGATCCGGATGCTGGACCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 72 bp | TCGTCGTCTCTGGGACGCCGGCTCAGCAAAATGGACTaGGTGCCCATTGGGGAGGTCATGTTGATGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSSLGRRLSKMD*VPIGEVMLMFR Trigger: CCTGAACATCAACATGACCTCCCCAATGGGCACCAAGTCCATTTTGCTGAGCCGGCGTCCCAGAGACGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS GCA 72 bp | TGCAAAGGGGAGCTTTCGGACTCCAAAGCCGTGTTCTaGTGCAACTTGGCGAGCCTCTTCCTCTCCGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: CKGELSDSKAVF*CNLASLFLSVF Trigger: AAAGACGGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTCCCCTTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS GCA 72 bp | AGCTGGTTCCGCTTGGAGGTGAGCACAGTCAGATGTTaGATGTCTCTCCAGGTCAGATCCAGGTTAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SWFRLEVSTVRC*MSLQVRSRLAS Trigger: GGAGGCTAACCTGGATCTGACCTGGAGAGACATGCAACATCTGACTGTGCTCACCTCCAAGCGGAACCAGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CCA 72 bp | ATGGAGGAGGCTTCGATGATGTCTGTCATAAAGGGCTaGTCCAGCATCCGGATCCCTGCCACCTTGGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: MEEASMMSVIKG*SSIRIPATLEL Trigger: CAACTCCAAGGTGGCAGGGATCCGGATGCTGGACCAGCCCTTTATGACAGACATCATCGAAGCCTCCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CCA 72 bp | CTTAGACTGGTAATCCCTCACCACCTGATCGATGTATaGGGCGCTCTGTGTGCCGTGAAGCATCAGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: LRLVIPHHLIDV*GALCAVKHQGP Trigger: TGGACCCTGATGCTTCACGGCACACAGAGCGCCCCATACATCGATCAGGTGGTGAGGGATTACCAGTCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS GCA 72 bp | AAAGGGGAGCTTTCGGACTCCAAAGCCGTGTTCTGCTaGAACTTGGCGAGCCTCTTCCTCTCCGTCTTTATG | + |
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Preference number: 6 (lower is better) Translates to: KGELSDSKAVFC*NLASLFLSVFM Trigger: CATAAAGACGGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTCCCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CCA 72 bp | AGCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTTaGCGAGCCTCTTCCTCTCCGTCTTTATGCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: SFRTPKPCSAAT*RASSSPSLCNS Trigger: GGAGTTGCATAAAGACGGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 72 bp | GAGCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTaGGCGAGCCTCTTCCTCTCCGTCTTTATGCAACTC | + |
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Preference number: 6 (lower is better) Translates to: ELSDSKAVFCCN*ASLFLSVFMQL Trigger: GAGTTGCATAAAGACGGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 72 bp | AAGCTGGTTCCGCTTGGAGGTGAGCACAGTCAGATGTaGCATGTCTCTCCAGGTCAGATCCAGGTTAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: KLVPLGGEHSQM*HVSPGQIQVSL Trigger: GAGGCTAACCTGGATCTGACCTGGAGAGACATGCAACATCTGACTGTGCTCACCTCCAAGCGGAACCAGCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 90 bp | CCTGCCACCTTGGAGTTGTATGCTACGCCGACTCCACAGATATTGTaGCTGGCTGCAGCAGAAACTTCTCCTGCACACCTAGTTCCATGG | + |
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Preference number: 6 (lower is better) Translates to: PATLELYATPTPQIL*LAAAETSPAHLVPW Trigger: CCATGGAACTAGGTGTGCAGGAGAAGTTTCTGCTGCAGCCAGCAACAATATCTGTGGAGTCGGCGTAGCATACAACTCCAAGGTGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS GCA 72 bp | TGGGGTCTCTCTCTAGCTGCCGCTTATGGTGTAGGCTaGGTCTTCTTTTGGCCTTTGCAAGCCCATTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: WGLSLAAAYGVG*VFFWPLQAHCD Trigger: ATCACAATGGGCTTGCAAAGGCCAAAAGAAGACGCAGCCTACACCATAAGCGGCAGCTAGAGAGAGACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 90 bp | TGCAAAGGGGAGCTTTCGGACTCCAAAGCCGTGTTCTGCTGCAACTaGGCGAGCCTCTTCCTCTCCGTCTTTATGCAACTCCACAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: CKGELSDSKAVFCCN*ASLFLSVFMQLHKK Trigger: TTTCTTGTGGAGTTGCATAAAGACGGAGAGGAAGAGGCTCGCCAAGTTGCAGCAGAACACGGCTTTGGAGTCCGAAAGCTCCCCTTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 90 bp | ATCCCTGCCACCTTGGAGTTGTATGCTACGCCGACTCCACAGATATaGTTGCTGGCTGCAGCAGAAACTTCTCCTGCACACCTAGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: IPATLELYATPTPQI*LLAAAETSPAHLVP Trigger: TGGAACTAGGTGTGCAGGAGAAGTTTCTGCTGCAGCCAGCAACAATATCTGTGGAGTCGGCGTAGCATACAACTCCAAGGTGGCAGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 90 bp | AAGTCTGTGGTAGCCACACCAGCCTCAGGATTCCTCTTCCTCCCATaGCTGAAGGTGGATGCTAAGGTGGAAGAGCAACTCTCATCATAC | + |
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Preference number: 6 (lower is better) Translates to: KSVVATPASGFLFLP*LKVDAKVEEQLSSY Trigger: GTATGATGAGAGTTGCTCTTCCACCTTAGCATCCACCTTCAGCAATGGGAGGAAGAGGAATCCTGAGGCTGGTGTGGCTACCACAGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS TCA 72 bp | GATGAACCTCATCATGAAGCTGGTTCCGCTTGGAGGTaGGCACAGTCAGATGTTGCATGTCTCTCCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: DEPHHEAGSAWR*AQSDVACLSRS Trigger: TGACCTGGAGAGACATGCAACATCTGACTGTGCTCACCTCCAAGCGGAACCAGCTTCATGATGAGGTTCATC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS GCA 72 bp | GTATGGGTAGGGGTCATTGCTGCTGAAGTCATAACTTaGATCAGCGTTGTAGTTGTAGGCCAGGTCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VWVGVIAAEVIT*ISVVVVGQVWV Trigger: CACCCAGACCTGGCCTACAACTACAACGCTGATGCAAGTTATGACTTCAGCAGCAATGACCCCTACCCATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CCA 72 bp | ATCTTTATCCTGGGGTCTCTCTCTAGCTGCCGCTTATaGTGTAGGCTGCGTCTTCTTTTGGCCTTTGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: IFILGSLSSCRL*CRLRLLLAFAS Trigger: GCTTGCAAAGGCCAAAAGAAGACGCAGCCTACACCATAAGCGGCAGCTAGAGAGAGACCCCAGGATAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 72 bp | ACCTTGGAGTTGTATGCTACGCCGACTCCACAGATATaGTTGCTGGCTGCAGCAGAAACTTCTCCTGCACAC | + |
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Preference number: 6 (lower is better) Translates to: TLELYATPTPQI*LLAAAETSPAH Trigger: GTGTGCAGGAGAAGTTTCTGCTGCAGCCAGCAACAATATCTGTGGAGTCGGCGTAGCATACAACTCCAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 72 bp | CGGACGAAGTTTTCCTTCCCCTCACATGCATTTGTTTaGAGGGTCAGTACCAGCTTGCCGGTGGGTGGTATT | + |
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Preference number: 6 (lower is better) Translates to: RTKFSFPSHAFV*RVSTSLPVGGI Trigger: AATACCACCCACCGGCAAGCTGGTACTGACCCTCAAAACAAATGCATGTGAGGGGAAGGAAAACTTCGTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 90 bp | TCTCTAGCTGCCGCTTATGGTGTAGGCTGCGTCTTCTTTTGGCCTTaGCAAGCCCATTGTGATAAAAGTGATACAGGCCTTCTGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: SLAAAYGVGCVFFWP*QAHCDKSDTGLLQR Trigger: CCTTTGCAGAAGGCCTGTATCACTTTTATCACAATGGGCTTGCAAAGGCCAAAAGAAGACGCAGCCTACACCATAAGCGGCAGCTAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS TCA 72 bp | CTGTGTATCGAGGGTATGGGTAGGGGTCATTGCTGCTaGAGTCATAACTTGCATCAGCGTTGTAGTTGTAGG | + |
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Preference number: 6 (lower is better) Translates to: LCIEGMGRGHCC*SHNLHQRCSCR Trigger: CCTACAACTACAACGCTGATGCAAGTTATGACTTCAGCAGCAATGACCCCTACCCATACCCTCGATACACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CCA 72 bp | ATGGCTGTTGAACCAGTCATCTGTGTATCGAGGGTATaGGTAGGGGTCATTGCTGCTGAAGTCATAACTTGC | + |
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Preference number: 6 (lower is better) Translates to: MAVEPVICVSRV*VGVIAAEVITC Trigger: GCAAGTTATGACTTCAGCAGCAATGACCCCTACCCATACCCTCGATACACAGATGACTGGTTCAACAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 72 bp | GCCGCTTATGGTGTAGGCTGCGTCTTCTTTTGGCCTTaGCAAGCCCATTGTGATAAAAGTGATACAGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: AAYGVGCVFFWP*QAHCDKSDTGL Trigger: AAGGCCTGTATCACTTTTATCACAATGGGCTTGCAAAGGCCAAAAGAAGACGCAGCCTACACCATAAGCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS TCA 72 bp | TCTTCCTCTCCGTCTTTATGCAACTCCACAAGAAAATaGTTCGTGAAGACGGGTCTCTCGGCAGACGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SSSPSLCNSTRK*FVKTGLSADAK Trigger: TTTTGCGTCTGCCGAGAGACCCGTCTTCACGAATCATTTTCTTGTGGAGTTGCATAAAGACGGAGAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS GCA 72 bp | AGTTTTCCAGTCTTTAGCCATTTTCACCATGGCACCTaGATCAAGGACTCCGTAGCCAAAGAGGTGATTAAA | + |
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Preference number: 6 (lower is better) Translates to: SFPVFSHFHHGT*IKDSVAKEVIK Trigger: TTTAATCACCTCTTTGGCTACGGAGTCCTTGATGCAGGTGCCATGGTGAAAATGGCTAAAGACTGGAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CCA 72 bp | ATAACTTGCATCAGCGTTGTAGTTGTAGGCCAGGTCTaGGTGGAGATAGTCAATTCCATCATCCATAATTCC | + |
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Preference number: 6 (lower is better) Translates to: ITCISVVVVGQV*VEIVNSIIHNS Trigger: GGAATTATGGATGATGGAATTGACTATCTCCACCCAGACCTGGCCTACAACTACAACGCTGATGCAAGTTAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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| CDS CAA 72 bp | GTAAAGAGAGGATCATTCATGTTGATGTCAATCTCATaGATGTCCCTGTACCCTCTCTTTTTACGGTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: VKRGSFMLMSIS*MSLYPLFLRSN Trigger: ATTTGACCGTAAAAAGAGAGGGTACAGGGACATCAATGAGATTGACATCAACATGAATGATCCTCTCTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028905.10 |
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