Pregenerated sensors for PCSK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021587Ensembl transcript IDs: ENSMUST00000022075.6, ENSMUST00000222727.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACCTTCAAAGACAGGGTATCAAGGGCAAGGCTCTGGAGAGGGCTTaGTTATGTACAAATGCTAATGATTCAACAGGAATTGAAAACTTG | + |
|
Preference number: 1 (lower is better) Translates to: NLQRQGIKGKALERA*LCTNANDSTGIENL Trigger: CAAGTTTTCAATTCCTGTTGAATCATTAGCATTTGTACATAACCAAGCCCTCTCCAGAGCCTTGCCCTTGATACCCTGTCTTTGAAGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR GCA 90 bp | ACTGTAGTAAAGGGCTGTGTCCCAAGAATGACTTTAGAAAGAAGTTaGTTCACTTGTATAGACAGGGAAGACATACTCTTAAACACTGAG | + |
|
Preference number: 1 (lower is better) Translates to: TVVKGCVPRMTLERS*FTCIDREDILLNTE Trigger: CTCAGTGTTTAAGAGTATGTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACACAGCCCTTTACTACAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR CAA 90 bp | AAAATAGAAGGCCAGGTCTTACATAGCATGGGTCACAGCCACCTTTaGACCCATAGAGACCTCTACATGGTACACCAATCAAGAGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: KIEGQVLHSMGHSHL*THRDLYMVHQSRGT Trigger: TGTTCCTCTTGATTGGTGTACCATGTAGAGGTCTCTATGGGTCAAAAGGTGGCTGTGACCCATGCTATGTAAGACCTGGCCTTCTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR-3UTR CCA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCTAGAGAAGACCCTGTaGTGTCCAGAAATGATCACT | + |
|
Preference number: 2 (lower is better) Translates to: WTMGLRIRFHVRSHTFINLEKTL*CPEMIT Trigger: AGTGATCATTTCTGGACACCACAGGGTCTTCTCTAG...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR-3UTR GCA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCATTCAAAGAACCCCATTaGAAAAATAGGGAACAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: AIAVMDDGPENQVSCEISFKEPH*KNREQD Trigger: ATCCTGTTCCCTATTTTTGCAATGGGGTTCTTTGAA...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR-3UTR GCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCACCTAGGAACACAGCTTaGAAAAGGCATCTTGTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: MGLRIRFHVRSHTFINPSPRNTA*KRHLVA Trigger: AGCAACAAGATGCCTTTTGCAAGCTGTGTTCCTAGG...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR-3UTR TCA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCATGAATTAGCTCTTTaGGTTTTGAGTTTGTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: WTMGLRIRFHVRSHTFINHELAL*VLSLWF Trigger: GAACCACAAACTCAAAACTCAAAGAGCTAATTCATG...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR-3UTR GCA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCAAAAGGCATCTTGTTaGTTCTCTGCTAAAGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: WTMGLRIRFHVRSHTFINQKASC*FSAKAF Trigger: AAATGCTTTAGCAGAGAAGCAACAAGATGCCTTTTG...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR CCA 72 bp | CAAGCAAGGAGAGACAGAAGAGACACTAATGAGGGCTaGACACTGTACAAGCACATGAAATATGTGTATGAG | + |
|
Preference number: 3 (lower is better) Translates to: QARRDRRDTNEG*TLYKHMKYVYE Trigger: CTCATACACATATTTCATGTGCTTGTACAGTGTCCAGCCCTCATTAGTGTCTCTTCTGTCTCTCCTTGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR CCA 72 bp | AGACAGGGTATCAAGGGCAAGGCTCTGGAGAGGGCTTaGTTATGTACAAATGCTAATGATTCAACAGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: RQGIKGKALERA*LCTNANDSTGI Trigger: AATTCCTGTTGAATCATTAGCATTTGTACATAACCAAGCCCTCTCCAGAGCCTTGCCCTTGATACCCTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR CCA 72 bp | AAAACCTTCAAAGACAGGGTATCAAGGGCAAGGCTCTaGAGAGGGCTTGGTTATGTACAAATGCTAATGATT | + |
|
Preference number: 3 (lower is better) Translates to: KTFKDRVSRARL*RGLGYVQMLMI Trigger: AATCATTAGCATTTGTACATAACCAAGCCCTCTCCAGAGCCTTGCCCTTGATACCCTGTCTTTGAAGGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR TCA 72 bp | TCTGACTTGAAACATGGAAGCATTTTGGTAAGAATTTaGATACTGTCCTCTGAGACTAGAGAAGACCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SDLKHGSILVRI*ILSSETREDPV Trigger: CACAGGGTCTTCTCTAGTCTCAGAGGACAGTATTCAAATTCTTACCAAAATGCTTCCATGTTTCAAGTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR GCA 72 bp | AAGGGCTGTGTCCCAAGAATGACTTTAGAAAGAAGTTaGTTCACTTGTATAGACAGGGAAGACATACTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: KGCVPRMTLERS*FTCIDREDILL Trigger: TAAGAGTATGTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACACAGCCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR TCA 72 bp | AGTGTATTTATACCCTATACAGATTCACGTAGTATGTaGGTGGGCAAAGTTACATGCATAGAAAGACAAACA | + |
|
Preference number: 3 (lower is better) Translates to: SVFIPYTDSRSM*VGKVTCIERQT Trigger: TGTTTGTCTTTCTATGCATGTAACTTTGCCCACTCACATACTACGTGAATCTGTATAGGGTATAAATACACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGGCAGAGGCAGCTTCTTaGCCTCCGGGGATCTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVAEAAS*PPGISA Trigger: GGCGGAGATCCCCGGAGGGCAAGAAGCTGCCTCTGC...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGCTGTGTGGGTCTCTGTaGAGTCATTGTGCAGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVLCGSL*SHCAGQ Trigger: CTGACCTGCACAATGACTGCACAGAGACCCACACAG...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATGCCGAGGTGCCTGTGTaGGTCTCTGTGCAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: WTMGLRIRFHVRSHTFINAEVPV*VSVQSL Trigger: CAATGACTGCACAGAGACCCACACAGGCACCTCGGC...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR CAA 72 bp | GGCCAGGTCTTACATAGCATGGGTCACAGCCACCTTTaGACCCATAGAGACCTCTACATGGTACACCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GQVLHSMGHSHL*THRDLYMVHQS Trigger: TGATTGGTGTACCATGTAGAGGTCTCTATGGGTCAAAAGGTGGCTGTGACCCATGCTATGTAAGACCTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACCTCTGCATACCAAGGTaGCAGGCCTTGCTGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VPRMTLERSCFTCIDREDLCIPR*QALLGG Trigger: GCCTCCCAGCAAGGCCTGTCACCTTGGTATGCAGAG...GTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACATTTAGGATGTCCATaGGAGCTTGCAGCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AIAVMDDGPENQVSCEISHLGCP*ELAAAC Trigger: ACAGGCTGCTGCAAGCTCTCATGGACATCCTAAATG...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCAAGGTGACAGGCCTTaGTGGGAGGCACTGCTGATA | + |
|
Preference number: 4 (lower is better) Translates to: WTMGLRIRFHVRSHTFINQGDRP*WEALLI Trigger: TATCAGCAGTGCCTCCCAGCAAGGCCTGTCACCTTG...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | GTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACGTGCTGAAGCCGAGGTaGCTGTGTGGGTCTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPRMTLERSCFTCIDREDVLKPR*LCGSLC Trigger: GCACAGAGACCCACACAGGCACCTCGGCTTCAGCAC...GTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGCAGCCAACAGTACAGTaGTGGTTCCAACAGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVQPTVQ*WFQQQK Trigger: CTTCTGCTGTTGGAACCAGCACTGTACTGTTGGCTG...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCAGGTGACAGGCCTTGCTaGGAGGCACTGCTGATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSGDRPC*EALLIE Trigger: CTCTATCAGCAGTGCCTCCCAGCAAGGCCTGTCACC...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCAAGGGTTGAATCCAATTaGACTAGCCTCAATGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: AIAVMDDGPENQVSCEISRVESN*TSLNGI Trigger: GATGCCATTGAGGCTAGTTCAATTGGATTCAACCCT...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGTTCTCTCCCCATGTATaGACAGACATGAAGTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVFSPHV*TDMKSQ Trigger: TTGGGACTTCATGTCTGTTCATACATGGGGAGAGAA...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGATTAGGGCCCCAGCTTaGACTGTAAATATCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVIRAPA*TVNIHM Trigger: CATGTGGATATTTACAGTGCAAGCTGGGGCCCTAAT...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCACATGAAGGTCCAGCTTaGGCAGAGCTGCAGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSHEGPA*AELQSF Trigger: GAATGACTGCAGCTCTGCCCAAGCTGGACCTTCATG...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCACAGCTTGGGCAGAGCTaGAGTCATTCTGGTATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSQLGQS*SHSGIL Trigger: CAAGATACCAGAATGACTGCAGCTCTGCCCAAGCTG...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGTGGCATCAGTTACAATaGCATCCAGCATTCTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVWHQLQ*HPAFLC Trigger: GCATAAGAATGCTGGATGGCATTGTAACTGATGCCA...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCATCTCCAGGTAAGATTTaGGTTTGCCTCCAAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSSPGKI*VCLQGQ Trigger: CTGGCCTTGGAGGCAAACCCAAATCTTACCTGGAGA...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | GTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACTGGGTTACTGGCCAATaGGTCGTACTCAGAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPRMTLERSCFTCIDREDWVTGQ*VVLRGP Trigger: TGGACCTCTGAGTACGACCCATTGGCCAGTAACCCA...GTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCTGCTTCATGTGCTCTaGTTGAGAAGATGTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: WTMGLRIRFHVRSHTFINLLHVL*LRRCPM Trigger: CATGGGACATCTTCTCAACCAGAGCACATGAAGCAG...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCATTTTCAATGTCCAGGTaGCTACAGGATTCTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSFSMSR*LQDSLP Trigger: GGGGAGAGAATCCTGTAGGCACCTGGACATTGAAAA...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCATGGGTACCAGGAGATTaGCATTCAGGCTCTTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSWVPGD*HSGSFV Trigger: CACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCA...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCATACCCTCCACATTGCTaGTGCTGGAGTTTTTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSYPPHC*CWSFWV Trigger: TACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTA...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGAGGAGTTCCTTGTACCTaGTCATCCCTTCTACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRGVPCT*SSLLPS Trigger: GGAGGGTAGAAGGGATGAGCAGGTACAAGGAACTCC...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCAAGGGATGCTGAGCTTTaGACTTGGAGACTTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSRDAEL*TWRLLW Trigger: CCAAAGAAGTCTCCAAGTGCAAAGCTCAGCATCCCT...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGCGGGGAAATGGATCATaGTCATTATCGTTAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVRGNGS*SLSLKS Trigger: TGATTTTAACGATAATGATCATGATCCATTTCCCCG...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACGAAGTGAGTGTGACATaGAGGTCTCCTCTACGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPRMTLERSCFTCIDREDEVSVT*RSPLRE Trigger: TTCTCGTAGAGGAGACCTTCATGTCACACTCACTTC...GTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCATCTGTGCAGTCATTGTaGAGGTCAGCGCTTGTTATT | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSSVQSL*RSALVI Trigger: AATAACAAGCGCTGACCTGCACAATGACTGCACAGA...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACCTCTGGATCATAATTaGCATAAATGTCTGTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AIAVMDDGPENQVSCEISPLDHN*HKCLCD Trigger: ATCACACAGACATTTATGCCAATTATGATCCAGAGG...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | AGACGAATGATGAAGTTGGCTTTCATTTTGAAACTCACTCCAAAGTACAGTTTGTATTCAAATGCCTTCTaGGCTAGTCTGCCAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRMMKLAFILKLTPKYSLYSNAF*ASLPGP Trigger: GGGGCCTGGCAGACTAGCCCAGAAGGCATTTGAATA...CAAACTGTACTTTGGAGTGAGTTTCAAAATGAAAGCCAACTTCATCATTCGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATAATCCACCAGAGCTTTaGCATTTAGCAAGCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: WTMGLRIRFHVRSHTFINNPPEL*HLASQI Trigger: GATTTGGCTTGCTAAATGCCAAAGCTCTGGTGGATT...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACCACATTGCTGCTGCTaGAGTTTTTGGGTACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRPHCCC*SFWVPG Trigger: TCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGG...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACTGCAAGTACCACTGCTaGTTCCACATTGGATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VPRMTLERSCFTCIDREDCKYHC*FHIGSL Trigger: CAATGATCCAATGTGGAATCAGCAGTGGTACTTGCA...GTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACCAACCCCACACTTGTaGTTATTTGCTTGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRPTPHL*LFACMA Trigger: TGCCATGCAAGCAAATAATCACAAGTGTGGGGTTGG...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACTTCATGTGCTCTGGTTaGGAAGATGTCCCATGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VPRMTLERSCFTCIDREDFMCSG*EDVPCK Trigger: TTTGCATGGGACATCTTCTCAACCAGAGCACATGAA...GTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | GTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACTTTCATAAGGGATGCTaGGCTTTGCACTTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VPRMTLERSCFTCIDREDFHKGC*ALHLET Trigger: AGTCTCCAAGTGCAAAGCTCAGCATCCCTTATGAAA...GTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | AGACGAATGATGAAGTTGGCTTTCATTTTGAAACTCACTCCAAAGTACAGTTTGGCTTGGAGGGCTTGTTaGGCTTTTCCAAGGCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRMMKLAFILKLTPKYSLAWRAC*AFPRLH Trigger: ATGAAGCCTTGGAAAAGCTCAACAAGCCCTCCAAGC...CAAACTGTACTTTGGAGTGAGTTTCAAAATGAAAGCCAACTTCATCATTCGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGAATGTCCATGAGAGCTTaGAGCAGCCTGTCATCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRMSMRA*SSLSSL Trigger: TAGAGATGACAGGCTGCTGCAAGCTCTCATGGACAT...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCAATCATAGCTAGCCTCTaGATCATAATTGGCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: AIAVMDDGPENQVSCEISIIASL*IIIGIN Trigger: ATTTATGCCAATTATGATCCAGAGGCTAGCTATGAT...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | AGACGAATGATGAAGTTGGCTTTCATTTTGAAACTCACTCCAAAGTACAGTTTGAAGCCCAGACAAAGATaGAGCCTTTCCCTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRMMKLAFILKLTPKYSLKPRQR*SLSLVS Trigger: GGAGACAAGGGAAAGGCTCCATCTTTGTCTGGGCTT...CAAACTGTACTTTGGAGTGAGTTTCAAAATGAAAGCCAACTTCATCATTCGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCATTCACAAGCTCTTGTTaGGATTTCAACAATTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: AIAVMDDGPENQVSCEISFTSSC*DFNNYF Trigger: GAAGTAATTGTTGAAATCCCAACAAGAGCTTGTGAA...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | AGACGAATGATGAAGTTGGCTTTCATTTTGAAACTCACTCCAAAGTACAGTTTGGTAGGAGTCGCAGCATaGCCTTTGAAGGAGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RRMMKLAFILKLTPKYSLVGVAA*PLKEFL Trigger: AAGGAACTCCTTCAAAGGCCATGCTGCGACTCCTAC...CAAACTGTACTTTGGAGTGAGTTTCAAAATGAAAGCCAACTTCATCATTCGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR CAA 72 bp | GCTTATCCAAATGAACCTTTGGCTATAGCCCATGAGTaGTCTGGGGCTCTTAGAAAGTTCTCAACAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: AYPNEPLAIAHE*SGALRKFSTKS Trigger: AGATTTTGTTGAGAACTTTCTAAGAGCCCCAGACAACTCATGGGCTATAGCCAAAGGTTCATTTGGATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATAATGCTGAGTCTTTTTaGACTGAACGTTTACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WTMGLRIRFHVRSHTFINNAESF*TERLLL Trigger: GAGAAGTAAACGTTCAGTTCAAAAAGACTCAGCATT...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | AGACGAATGATGAAGTTGGCTTTCATTTTGAAACTCACTCCAAAGTACAGTTTGCAAACAGGTATTACATaGAGGTCCAGCTTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRMMKLAFILKLTPKYSLQTGIT*RSSLGR Trigger: TCTGCCCAAGCTGGACCTTCATGTAATACCTGTTTG...CAAACTGTACTTTGGAGTGAGTTTCAAAATGAAAGCCAACTTCATCATTCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACTTGTCTCCCCTGTTTaGCACCATATTCAAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRLVSPV*HHIQMP Trigger: AGGCATTTGAATATGGTGTCAAACAGGGGAGACAAG...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACAGACAACCAGATGCTaGATATCTCTCCAGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRQTTRC*ISLQVR Trigger: TCTTACCTGGAGAGATATGCAGCATCTGGTTGTCTG...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCACTGCTGATTCCACATTaGATCATTGAAGAGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSLLIPH*IIEEIQ Trigger: TTGGATCTCTTCAATGATCCAATGTGGAATCAGCAG...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGAATTCTTTTTCCAACCTaGGTTACTGGCCAATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRILFPT*VTGQWV Trigger: GACCCATTGGCCAGTAACCCAGGTTGGAAAAAGAAT...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR TCA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGATCCACATTGGATCATTaGAGAGATCCAATGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRSTLDH*RDPMLS Trigger: ACTCAGCATTGGATCTCTTCAATGATCCAATGTGGA...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCAACACTTGTGATTATTTaGTTGCATGGCAATTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSTLVII*LHGNFT Trigger: GGTGAAATTGCCATGCAAGCAAATAATCACAAGTGT...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | AGACGAATGATGAAGTTGGCTTTCATTTTGAAACTCACTCCAAAGTACAGTTTGCGGGACCTCCGAGGATaGCTTTTGTGTTTGAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRMMKLAFILKLTPKYSLRDLRG*LLCLNK Trigger: TTTATTCAAACACAAAAGCCATCCTCGGAGGTCCCG...CAAACTGTACTTTGGAGTGAGTTTCAAAATGAAAGCCAACTTCATCATTCGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| 3UTR CAA 72 bp | AAAGGGCTGTGTCCCAAGAATGACTTTAGAAAGAAGTaGCTTCACTTGTATAGACAGGGAAGACATACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGLCPKNDFRKK*LHLYRQGRHTL Trigger: AAGAGTATGTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACACAGCCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCACATTCATTAACAAACTaGCTCTTTGCTTTTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSHSLTN*LFAFTL Trigger: CAGTGTAAAAGCAAAGAGGCAGTTTGTTAATGAATG...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR GCA 90 bp | GTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACATTGTTGCTTCAAATTaGACATGTTCCAGAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VPRMTLERSCFTCIDREDIVASN*TCSRDL Trigger: CAAGTCTCTGGAACATGTGCAATTTGAAGCAACAAT...GTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCAATCATATCGGGGAAATaGATCATGATCATTATCGTT | + |
|
Preference number: 4 (lower is better) Translates to: MGLRIRFHVRSHTFINPSIISGK*IMIIIV Trigger: AACGATAATGATCATGATCCATTTCCCCGATATGAT...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGAGATTATTTGCTTGCATaGCAATTTCACCTGCACATC | + |
|
Preference number: 4 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRDYLLA*QFHLHI Trigger: GATGTGCAGGTGAAATTGCCATGCAAGCAAATAATC...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CCA 90 bp | CCTGCTCATCCCTTCTACCCTCCACATTGCTGCTGCTGGAGTTTTTaGGTACCAGGAGATTGCCATTCAGGCTCTTTTGTGTGGGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAHPFYPPHCCCWSF*VPGDCHSGSFVWAA Trigger: AGCGGCCCACACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 90 bp | GGGTTACTGGCCAATGGGTCGTACTCAGAGGTCCAGACAACCAGATaGTGCATATCTCTCCAGGTAAGATTTGGGTTTGCCTCCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLLANGSYSEVQTTR*CISLQVRFGFASKA Trigger: GGCCTTGGAGGCAAACCCAAATCTTACCTGGAGAGATATGCAGCATCTGGTTGTCTGGACCTCTGAGTACGACCCATTGGCCAGTAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS CCA 90 bp | TGTTCACCATCAAGCCTGCCCCATTCTTTTTCCAACCTGGGTTACTaGCCAATGGGTCGTACTCAGAGGTCCAGACAACCAGATGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSPSSLPHSFSNLGY*PMGRTQRSRQPDAA Trigger: TGCAGCATCTGGTTGTCTGGACCTCTGAGTACGACCCATTGGCCAGTAACCCAGGTTGGAAAAAGAATGGGGCAGGCTTGATGGTGAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS CCA 90 bp | AAATCGGCTGTTCACCATCAAGCCTGCCCCATTCTTTTTCCAACCTaGGTTACTGGCCAATGGGTCGTACTCAGAGGTCCAGACAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSAVHHQACPILFPT*VTGQWVVLRGPDNQ Trigger: CTGGTTGTCTGGACCTCTGAGTACGACCCATTGGCCAGTAACCCAGGTTGGAAAAAGAATGGGGCAGGCTTGATGGTGAACAGCCGATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS-3UTR CAA 90 bp | GTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACGGCAGAGGCAGCTTCTaGCCCTCCGGGGATCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VPRMTLERSCFTCIDREDGRGSF*PSGDLR Trigger: GCGGAGATCCCCGGAGGGCAAGAAGCTGCCTCTGCC...GTCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 90 bp | TTACTGGCCAATGGGTCGTACTCAGAGGTCCAGACAACCAGATGCTaGATATCTCTCCAGGTAAGATTTGGGTTTGCCTCCAAGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLANGSYSEVQTTRC*ISLQVRFGFASKAR Trigger: TCTGGCCTTGGAGGCAAACCCAAATCTTACCTGGAGAGATATGCAGCATCTGGTTGTCTGGACCTCTGAGTACGACCCATTGGCCAGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS GCA 90 bp | TACCCTCCACATTGCTGCTGCTGGAGTTTTTGGGTACCAGGAGATTaGCATTCAGGCTCTTTTGTGTGGGCCGCTTCTCCACAACATTCA | + |
|
Preference number: 5 (lower is better) Translates to: YPPHCCCWSFWVPGD*HSGSFVWAASPQHS Trigger: TGAATGTTGTGGAGAAGCGGCCCACACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 90 bp | AAGGAGTTCCTTGTACCTGCTCATCCCTTCTACCCTCCACATTGCTaGTGCTGGAGTTTTTGGGTACCAGGAGATTGCCATTCAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEFLVPAHPFYPPHC*CWSFWVPGDCHSGS Trigger: AGAGCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGGTACAAGGAACTCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 90 bp | TTGAAGGAGTTCCTTGTACCTGCTCATCCCTTCTACCCTCCACATTaGTGCTGCTGGAGTTTTTGGGTACCAGGAGATTGCCATTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LKEFLVPAHPFYPPH*CCWSFWVPGDCHSG Trigger: GCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGGTACAAGGAACTCCTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CCA 90 bp | CATCAAGCCTGCCCCATTCTTTTTCCAACCTGGGTTACTGGCCAATaGGTCGTACTCAGAGGTCCAGACAACCAGATGCTGCATATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HQACPILFPTWVTGQ*VVLRGPDNQMLHIS Trigger: AGAGATATGCAGCATCTGGTTGTCTGGACCTCTGAGTACGACCCATTGGCCAGTAACCCAGGTTGGAAAAAGAATGGGGCAGGCTTGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS GCA 90 bp | GAGTTCCTTGTACCTGCTCATCCCTTCTACCCTCCACATTGCTGCTaGTGGAGTTTTTGGGTACCAGGAGATTGCCATTCAGGCTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EFLVPAHPFYPPHCC*WSFWVPGDCHSGSF Trigger: AAAAGAGCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGGTACAAGGAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CCA 90 bp | TTCCTTGTACCTGCTCATCCCTTCTACCCTCCACATTGCTGCTGCTaGAGTTTTTGGGTACCAGGAGATTGCCATTCAGGCTCTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLVPAHPFYPPHCCC*SFWVPGDCHSGSFV Trigger: CACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGGTACAAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCAGTCTCTGTGCAGTCATaGTGCAGGTCAGCGCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: AIAVMDDGPENQVSCEISVSVQS*CRSALV Trigger: AACAAGCGCTGACCTGCACAATGACTGCACAGAGAC...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 90 bp | TCAGCCCACGTCACACGATCATCATCAGATAACCTCTTAGTGATATaGAGAGCGCTTCTTCGGGACCTCCGAGGATGGCTTTTGTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SAHVTRSSSDNLLVI*RALLRDLRGWLLCL Trigger: CAAACACAAAAGCCATCCTCGGAGGTCCCGAAGAAGCGCTCTTCATATCACTAAGAGGTTATCTGATGATGATCGTGTGACGTGGGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGTCCACATGGCCAGGGTaGAATCCAATTGAACTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVSTWPG*NPIELA Trigger: GGCTAGTTCAATTGGATTCAACCCTGGCCATGTGGA...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGTCAAGCTTGGAGGGCTaGTTGAGCTTTTCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVSSLEG*LSFSKA Trigger: AGCCTTGGAAAAGCTCAACAAGCCCTCCAAGCTTGA...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCAGATGGAGCCTTTCCCTaGTCTCCCCTGTTTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: MGLRIRFHVRSHTFINPSDGAFP*SPLFDT Trigger: GGTGTCAAACAGGGGAGACAAGGGAAAGGCTCCATC...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 90 bp | CTTTTCCCAAACAGGTATTACATGAAGGTCCAGCTTGGGCAGAGCTaGAGTCATTCTGGTATCTTGCAAGTACCACTGCTGATTCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LFPNRYYMKVQLGQS*SHSGILQVPLLIPH Trigger: ATGTGGAATCAGCAGTGGTACTTGCAAGATACCAGAATGACTGCAGCTCTGCCCAAGCTGGACCTTCATGTAATACCTGTTTGGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 90 bp | CCAGCTTGCACTGTAAATATCCACATGGCCAGGGTTGAATCCAATTaGACTAGCCTCAATGGCATCAGTTACAATGCCATCCAGCATTCT | + |
|
Preference number: 5 (lower is better) Translates to: PACTVNIHMARVESN*TSLNGISYNAIQHS Trigger: AGAATGCTGGATGGCATTGTAACTGATGCCATTGAGGCTAGTTCAATTGGATTCAACCCTGGCCATGTGGATATTTACAGTGCAAGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAGGGACACAACAACTCCAGACCCAGGAACATTTAAGGAAAAGGAGGGTGCTTGTGATTATTTGCTaGCATGGCAATTTCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KPGTQQLQTQEHLRKRRVLVIIC*HGNFTC Trigger: GCAGGTGAAATTGCCATGCAAGCAAATAATCACAAG...CACCCTCCTTTTCCTTAAATGTTCCTGGGTCTGGAGTTGTTGTGTCCCTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 90 bp | GCCAACAGTACAGTGCTGGTTCCAACAGCAGAAGTGAGTGTGACATaGAGGTCTCCTCTACGAGAATATTCAATTGTTGCTTCAAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: ANSTVLVPTAEVSVT*RSPLREYSIVASNC Trigger: GCAATTTGAAGCAACAATTGAATATTCTCGTAGAGGAGACCTTCATGTCACACTCACTTCTGCTGTTGGAACCAGCACTGTACTGTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCAGTAATAACAACTCCTTaGCCAGTAATACCCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIAVMDDGPENQVSCEISVITTP*PVIPFS Trigger: GGAAAAGGGTATTACTGGCAAAGGAGTTGTTATTAC...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCAACATGTTCCAGAGACTaGATAGCATTTTCTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: AIAVMDDGPENQVSCEISTCSRD*IAFSCP Trigger: AGGACAAGAAAATGCTATCAAGTCTCTGGAACATGT...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | GCTATTGCTGTGATGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTGGAGACTTCTTaGGTGATTGTTTTGAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AIAVMDDGPENQVSCEISHLETS*VIVLKV Trigger: CACTTTCAAAACAATCACCAAAGAAGTCTCCAAGTG...TGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCATCACAGCAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | AGACGAATGATGAAGTTGGCTTTCATTTTGAAACTCACTCCAAAGTACAGTTTGCTGCTGCTGGAGTTTTaGGGTACCAGGAGATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRMMKLAFILKLTPKYSLLLLEF*GTRRLP Trigger: TGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAG...CAAACTGTACTTTGGAGTGAGTTTCAAAATGAAAGCCAACTTCATCATTCGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACTTCTACCCTCCACATaGCTGCTGCTGGAGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRLLPST*LLLEFL Trigger: CAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAG...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | AGACGAATGATGAAGTTGGCTTTCATTTTGAAACTCACTCCAAAGTACAGTTTGGTCGCAGCATGGCCTTaGAAGGAGTTCCTTGTACCT | + |
|
Preference number: 5 (lower is better) Translates to: RRMMKLAFILKLTPKYSLVAAWP*KEFLVP Trigger: AGGTACAAGGAACTCCTTCAAAGGCCATGCTGCGAC...CAAACTGTACTTTGGAGTGAGTTTCAAAATGAAAGCCAACTTCATCATTCGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGATCAGAGCCTTCAAGCTaGGAGGGCTTGTTGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRSEPSS*EGLLSF Trigger: AAAGCTCAACAAGCCCTCCAAGCTTGAAGGCTCTGA...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 90 bp | ATGCCTCCAACTTTGGAATTATATGCAACTCCAACCCCACACTTGTaGTTATTTGCTTGCATGGCAATTTCACCTGCACATCTTGTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MPPTLELYATPTPHL*LFACMAISPAHLVP Trigger: TGGAACAAGATGTGCAGGTGAAATTGCCATGCAAGCAAATAATCACAAGTGTGGGGTTGGAGTTGCATATAATTCCAAAGTTGGAGGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCACACTTGTGATTATTaGCTTGCATGGCAATTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: WTMGLRIRFHVRSHTFINHTCDY*LAWQFH Trigger: GTGAAATTGCCATGCAAGCAAATAATCACAAGTGTG...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACCTTGTCTCCCCTGTTaGACACCATATTCAAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRPCLPC*TPYSNA Trigger: GGCATTTGAATATGGTGTCAAACAGGGGAGACAAGG...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGGACGATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATAATCCTTCCTTCATTTaGCATTCTTCCAGACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: WTMGLRIRFHVRSHTFINNPSFI*HSSRHV Trigger: GACATGTCTGGAAGAATGCAAAATGAAGGAAGGATT...ATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCATCGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CCA 90 bp | TTCCAGAGACTTGATAGCATTTTCTTGTCCTTCACAAGCTCTTGTTaGGATTTCAACAATTACTTCTCCATTAGCTTTCAGGGCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FQRLDSIFLSFTSSC*DFNNYFSISFQGSR Trigger: CCTAGAGCCCTGAAAGCTAATGGAGAAGTAATTGTTGAAATCCCAACAAGAGCTTGTGAAGGACAAGAAAATGCTATCAAGTCTCTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | AGACGAATGATGAAGTTGGCTTTCATTTTGAAACTCACTCCAAAGTACAGTTTGTTGGGTACCAGGAGATaGCCATTCAGGCTCTTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRMMKLAFILKLTPKYSLLGTRR*PFRLFC Trigger: ACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCAA...CAAACTGTACTTTGGAGTGAGTTTCAAAATGAAAGCCAACTTCATCATTCGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 90 bp | TTCTGGTATCTTGCAAGTACCACTGCTGATTCCACATTGGATCATTaGAGAGATCCAATGCTGAGTCTTTTTGAACTGAACGTTTACTTC | + |
|
Preference number: 5 (lower is better) Translates to: FWYLASTTADSTLDH*RDPMLSLFELNVYF Trigger: GAAGTAAACGTTCAGTTCAAAAAGACTCAGCATTGGATCTCTTCAATGATCCAATGTGGAATCAGCAGTGGTACTTGCAAGATACCAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | ATGGGCCTGAGAATCAGGTTTCATGTGAGATCTCACACTTTCATCAATCCTTCACTTCACAAGCTCTTGTaGGGATTTCAACAATTACTT | + |
|
Preference number: 5 (lower is better) Translates to: MGLRIRFHVRSHTFINPSLHKLL*GFQQLL Trigger: AAGTAATTGTTGAAATCCCAACAAGAGCTTGTGAAG...TGAAGGATTGATGAAAGTGTGAGATCTCACATGAAACCTGATTCTCAGGCCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACAATTCTTAAAGCCATaGGGGGATGTATCTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRQFLKP*GDVSLS Trigger: GGAAAGAGATACATCCCCCAATGGCTTTAAGAATTG...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 90 bp | AACTTTGGAATTATATGCAACTCCAACCCCACACTTGTGATTATTTaGTTGCATGGCAATTTCACCTGCACATCTTGTTCCATGTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: NFGIICNSNPTLVII*LHGNFTCTSCSMFV Trigger: AACAAACATGGAACAAGATGTGCAGGTGAAATTGCCATGCAAGCAAATAATCACAAGTGTGGGGTTGGAGTTGCATATAATTCCAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 90 bp | AGTGAGTGTGACATGAAGGTCTCCTCTACGAGAATATTCAATTGTTaGTTCAAATTGCACATGTTCCAGAGACTTGATAGCATTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SECDMKVSSTRIFNC*FKLHMFQRLDSIFL Trigger: CAAGAAAATGCTATCAAGTCTCTGGAACATGTGCAATTTGAAGCAACAATTGAATATTCTCGTAGAGGAGACCTTCATGTCACACTCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACTTATGCCTCCAACTTaGGAATTATATGCAACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRLMPPT*ELYATP Trigger: TGGAGTTGCATATAATTCCAAAGTTGGAGGCATAAG...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGAGTCCTTCACAAGCTCTaGTTGGGATTTCAACAATTA | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRVLHKL*LGFQQL Trigger: TAATTGTTGAAATCCCAACAAGAGCTTGTGAAGGAC...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGACTTGATAGCATTTTCTaGTCCTTCACAAGCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRLDSIF*SFTSSC Trigger: ACAAGAGCTTGTGAAGGACAAGAAAATGCTATCAAG...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGATTTCACCTGCACATCTaGTTCCATGTTTGTTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRFHLHI*FHVCFH Trigger: ATGAAAACAAACATGGAACAAGATGTGCAGGTGAAA...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGAAATTGTTGCTTCAAATaGCACATGTTCCAGAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRNCCFK*HMFQRL Trigger: AAGTCTCTGGAACATGTGCAATTTGAAGCAACAATT...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS-3UTR CAA 90 bp | TGTCCCAAGAATGACTTTAGAAAGAAGTTGCTTCACTTGTATAGACAGGGAAGATTTGAAAGTGCATTCTaGCTAAAAGCACTTTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CPKNDFRKKLLHLYRQGRFESAF*LKALCR Trigger: CCTACAAAGTGCTTTTAGCAAGAATGCACTTTCAAA...TCTTCCCTGTCTATACAAGTGAAGCAACTTCTTTCTAAAGTCATTCTTGGGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 72 bp | TACCCCAGTTCTTCGGCGATGGCAGAGGCAGCTTCTTaGCCTCCGGGGATCTCCGCCGCCCATTCATTAACA | + |
|
Preference number: 6 (lower is better) Translates to: YPSSSAMAEAAS*PPGISAAHSLT Trigger: TGTTAATGAATGGGCGGCGGAGATCCCCGGAGGGCAAGAAGCTGCCTCTGCCATCGCCGAAGAACTGGGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 72 bp | ATACCCCAGTTCTTCGGCGATGGCAGAGGCAGCTTCTaGCCCTCCGGGGATCTCCGCCGCCCATTCATTAAC | + |
|
Preference number: 6 (lower is better) Translates to: IPQFFGDGRGSF*PSGDLRRPFIN Trigger: GTTAATGAATGGGCGGCGGAGATCCCCGGAGGGCAAGAAGCTGCCTCTGCCATCGCCGAAGAACTGGGGTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 72 bp | GGGGTGCTGAAGCCGAGGTGCCTGTGTGGGTCTCTGTaGAGTCATTGTGCAGGTCAGCGCTTGTTATTCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GVLKPRCLCGSL*SHCAGQRLLFA Trigger: AGCGAATAACAAGCGCTGACCTGCACAATGACTGCACAGAGACCCACACAGGCACCTCGGCTTCAGCACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 72 bp | GAAGCCGAGGTGCCTGTGTGGGTCTCTGTGCAGTCATaGTGCAGGTCAGCGCTTGTTATTCGCTGGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: EAEVPVWVSVQS*CRSALVIRWSV Trigger: CACAGACCAGCGAATAACAAGCGCTGACCTGCACAATGACTGCACAGAGACCCACACAGGCACCTCGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 90 bp | ACCTGCTCATCCCTTCTACCCTCCACATTGCTGCTGCTGGAGTTTTaGGGTACCAGGAGATTGCCATTCAGGCTCTTTTGTGTGGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TCSSLLPSTLLLLEF*GTRRLPFRLFCVGR Trigger: GCGGCCCACACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 72 bp | AGTCGCAGCATGGCCTTTGAAGGAGTTCCTTGTACCTaGTCATCCCTTCTACCCTCCACATTGCTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRSMAFEGVPCT*SSLLPSTLLLL Trigger: CAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGGTACAAGGAACTCCTTCAAAGGCCATGCTGCGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 72 bp | GCCGAGGTGCCTGTGTGGGTCTCTGTGCAGTCATTGTaGAGGTCAGCGCTTGTCTGTTTGACACCATATTCA | + |
|
Preference number: 6 (lower is better) Translates to: AEVPVWVSVQSL*RSALVCLTPYS Trigger: TGAATATGGTGTCAAACAGACAAGCGCTGACCTGCACAATGACTGCACAGAGACCCACACAGGCACCTCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222727.2 |
||
| CDS CCA 72 bp | CCTGCTCATCCCTTCTACCCTCCACATTGCTGCTGCTaGAGTTTTTGGGTACCAGGAGATTGCCATTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PAHPFYPPHCCC*SFWVPGDCHSG Trigger: GCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 72 bp | GAAGCCGAGGTGCCTGTGTGGGTCTCTGTGCAGTCATaGTGCAGGTCAGCGCTTGTCTGTTTGACACCATAT | + |
|
Preference number: 6 (lower is better) Translates to: EAEVPVWVSVQS*CRSALVCLTPY Trigger: ATATGGTGTCAAACAGACAAGCGCTGACCTGCACAATGACTGCACAGAGACCCACACAGGCACCTCGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222727.2 |
||
| CDS GCA 72 bp | CATTGCTGCTGCTGGAGTTTTTGGGTACCAGGAGATTaGCATTCAGGCTCTTTTGTGTGGGCCGCTTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HCCCWSFWVPGD*HSGSFVWAASP Trigger: TGGAGAAGCGGCCCACACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CCA 72 bp | TGCCCCATTCTTTTTCCAACCTGGGTTACTGGCCAATaGGTCGTACTCAGAGGTCCAGACAACCAGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CPILFPTWVTGQ*VVLRGPDNQML Trigger: CAGCATCTGGTTGTCTGGACCTCTGAGTACGACCCATTGGCCAGTAACCCAGGTTGGAAAAAGAATGGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS CCA 72 bp | TCAAGCCTGCCCCATTCTTTTTCCAACCTGGGTTACTaGCCAATGGGTCGTACTCAGAGGTCCAGACAACCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLPHSFSNLGY*PMGRTQRSRQP Trigger: TGGTTGTCTGGACCTCTGAGTACGACCCATTGGCCAGTAACCCAGGTTGGAAAAAGAATGGGGCAGGCTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS CCA 72 bp | GTTCACCATCAAGCCTGCCCCATTCTTTTTCCAACCTaGGTTACTGGCCAATGGGTCGTACTCAGAGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VHHQACPILFPT*VTGQWVVLRGP Trigger: TGGACCTCTGAGTACGACCCATTGGCCAGTAACCCAGGTTGGAAAAAGAATGGGGCAGGCTTGATGGTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS CAA 72 bp | ACATTGCTGCTGCTGGAGTTTTTGGGTACCAGGAGATaGCCATTCAGGCTCTTTTGTGTGGGCCGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLLLLEFLGTRR*PFRLFCVGRFS Trigger: GGAGAAGCGGCCCACACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 90 bp | CTACCCTCCACATTGCTGCTGCTGGAGTTTTTGGGTACCAGGAGATaGCCATTCAGGCTCTTTTGTGTGGGCCGCTTCTCCACAACATTC | + |
|
Preference number: 6 (lower is better) Translates to: LPSTLLLLEFLGTRR*PFRLFCVGRFSTTF Trigger: GAATGTTGTGGAGAAGCGGCCCACACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 72 bp | GTACCTGCTCATCCCTTCTACCCTCCACATTGCTGCTaGTGGAGTTTTTGGGTACCAGGAGATTGCCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: VPAHPFYPPHCC*WSFWVPGDCHS Trigger: TGAATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGGTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 72 bp | CTTGTACCTGCTCATCCCTTCTACCCTCCACATTGCTaGTGCTGGAGTTTTTGGGTACCAGGAGATTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LVPAHPFYPPHC*CWSFWVPGDCH Trigger: ATGGCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGGTACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 72 bp | TTCCTTGTACCTGCTCATCCCTTCTACCCTCCACATTaGTGCTGCTGGAGTTTTTGGGTACCAGGAGATTGC | + |
|
Preference number: 6 (lower is better) Translates to: FLVPAHPFYPPH*CCWSFWVPGDC Trigger: GCAATCTCCTGGTACCCAAAAACTCCAGCAGCAGCAATGTGGAGGGTAGAAGGGATGAGCAGGTACAAGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 72 bp | TGTGGGTCTCTGTGCAGTCATTGTGCAGGTCAGCGCTaGTTATTCGCTGGTCTGTGTAATCACCACTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGSLCSHCAGQR*LFAGLCNHHCC Trigger: ACAGCAGTGGTGATTACACAGACCAGCGAATAACAAGCGCTGACCTGCACAATGACTGCACAGAGACCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CCA 72 bp | CATGAAGGTCCAGCTTGGGCAGAGCTGCAGTCATTCTaGTATCTTGCAAGTACCACTGCTGATTCCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: HEGPAWAELQSF*YLASTTADSTL Trigger: CAATGTGGAATCAGCAGTGGTACTTGCAAGATACCAGAATGACTGCAGCTCTGCCCAAGCTGGACCTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CCA 72 bp | TGGGTACCAGGAGATTGCCATTCAGGCTCTTTTGTGTaGGCCGCTTCTCCACAACATTCACCATCTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WVPGDCHSGSFV*AASPQHSPSFP Trigger: TGGAAAAGATGGTGAATGTTGTGGAGAAGCGGCCCACACAAAAGAGCCTGAATGGCAATCTCCTGGTACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 90 bp | GGCACATTTCTCCAGGTCCTAGGATCAGCCAAATCCACCAGAGCTTaGGCATTTAGCAAGCCAAATCCAAATCGGCTGTTCACCATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTFLQVLGSAKSTRA*AFSKPNPNRLFTIK Trigger: CTTGATGGTGAACAGCCGATTTGGATTTGGCTTGCTAAATGCCAAAGCTCTGGTGGATTTGGCTGATCCTAGGACCTGGAGAAATGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS CAA 72 bp | CAGACAAAGATGGAGCCTTTCCCTTGTCTCCCCTGTTaGACACCATATTCAAATGCCTTCTGGGCTAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QTKMEPFPCLPC*TPYSNAFWASL Trigger: CAGACTAGCCCAGAAGGCATTTGAATATGGTGTCAAACAGGGGAGACAAGGGAAAGGCTCCATCTTTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 72 bp | GATGTGTACACACGAGGCTGCTTCATGTGCTCTGGTTaGGAAGATGTCCCATGCAAAATCAACTTCCAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: DVYTRGCFMCSG*EDVPCKINFQF Trigger: GAACTGGAAGTTGATTTTGCATGGGACATCTTCTCAACCAGAGCACATGAAGCAGCCTCGTGTGTACACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 72 bp | GGATGTGTACACACGAGGCTGCTTCATGTGCTCTGGTaGAGAAGATGTCCCATGCAAAATCAACTTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: GCVHTRLLHVLW*RRCPMQNQLPV Trigger: AACTGGAAGTTGATTTTGCATGGGACATCTTCTCAACCAGAGCACATGAAGCAGCCTCGTGTGTACACATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 90 bp | TGTATTGTAGGATGTGTACACACGAGGCTGCTTCATGTGCTCTGGTaGAGAAGATGTCCCATGCAAAATCAACTTCCAGTTCACAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: CIVGCVHTRLLHVLW*RRCPMQNQLPVHNP Trigger: AGGATTGTGAACTGGAAGTTGATTTTGCATGGGACATCTTCTCAACCAGAGCACATGAAGCAGCCTCGTGTGTACACATCCTACAATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 72 bp | GCTGCAGTCATTCTGGTATCTTGCAAGTACCACTGCTaGTTCCACATTGGATCATTGAAGAGATCCAATGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAVILVSCKYHC*FHIGSLKRSNA Trigger: AGCATTGGATCTCTTCAATGATCCAATGTGGAATCAGCAGTGGTACTTGCAAGATACCAGAATGACTGCAGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 72 bp | ACAGTGCTGGTTCCAACAGCAGAAGTGAGTGTGACATaGAGGTCTCCTCTACGAGAATATTCAATTGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TVLVPTAEVSVT*RSPLREYSIVA Trigger: AGCAACAATTGAATATTCTCGTAGAGGAGACCTTCATGTCACACTCACTTCTGCTGTTGGAACCAGCACTGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 72 bp | AATGTCCAGGTGCCTACAGGATTCTCTCCCCATGTATaGACAGACATGAAGTCCCAATTCTTAAAGCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: NVQVPTGFSPHV*TDMKSQFLKPL Trigger: CAATGGCTTTAAGAATTGGGACTTCATGTCTGTTCATACATGGGGAGAGAATCCTGTAGGCACCTGGACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 72 bp | ACTGTAAATATCCACATGGCCAGGGTTGAATCCAATTaGACTAGCCTCAATGGCATCAGTTACAATGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: TVNIHMARVESN*TSLNGISYNAI Trigger: GATGGCATTGTAACTGATGCCATTGAGGCTAGTTCAATTGGATTCAACCCTGGCCATGTGGATATTTACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022075.6 ENSMUST00000222727.2 |
||
| CDS CAA 72 bp | ATATGCAACTCCAACCCCACACTTGTGATTATTTGCTaGCATGGCAATTTCACCTGCACATCTTGTTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: ICNSNPTLVIIC*HGNFTCTSCSM Trigger: CATGGAACAAGATGTGCAGGTGAAATTGCCATGCAAGCAAATAATCACAAGTGTGGGGTTGGAGTTGCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 72 bp | CTTGCAAGTACCACTGCTGATTCCACATTGGATCATTaGAGAGATCCAATGCTGAGTCTTTTTGAACTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LASTTADSTLDH*RDPMLSLFELN Trigger: GTTCAGTTCAAAAAGACTCAGCATTGGATCTCTTCAATGATCCAATGTGGAATCAGCAGTGGTACTTGCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 72 bp | ATTATATGCAACTCCAACCCCACACTTGTGATTATTTaGTTGCATGGCAATTTCACCTGCACATCTTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IICNSNPTLVII*LHGNFTCTSCS Trigger: GGAACAAGATGTGCAGGTGAAATTGCCATGCAAGCAAATAATCACAAGTGTGGGGTTGGAGTTGCATATAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 90 bp | CAACTTTGGAATTATATGCAACTCCAACCCCACACTTGTGATTATTaGCTTGCATGGCAATTTCACCTGCACATCTTGTTCCATGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: QLWNYMQLQPHTCDY*LAWQFHLHILFHVC Trigger: ACAAACATGGAACAAGATGTGCAGGTGAAATTGCCATGCAAGCAAATAATCACAAGTGTGGGGTTGGAGTTGCATATAATTCCAAAGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 72 bp | ACTTTGGAATTATATGCAACTCCAACCCCACACTTGTaGTTATTTGCTTGCATGGCAATTTCACCTGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: TLELYATPTPHL*LFACMAISPAH Trigger: ATGTGCAGGTGAAATTGCCATGCAAGCAAATAATCACAAGTGTGGGGTTGGAGTTGCATATAATTCCAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 72 bp | AATTATATGCAACTCCAACCCCACACTTGTGATTATTaGCTTGCATGGCAATTTCACCTGCACATCTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: NYMQLQPHTCDY*LAWQFHLHILF Trigger: GAACAAGATGTGCAGGTGAAATTGCCATGCAAGCAAATAATCACAAGTGTGGGGTTGGAGTTGCATATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 90 bp | GACATGAAGGTCTCCTCTACGAGAATATTCAATTGTTGCTTCAAATaGCACATGTTCCAGAGACTTGATAGCATTTTCTTGTCCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: DMKVSSTRIFNCCFK*HMFQRLDSIFLSFT Trigger: TGTGAAGGACAAGAAAATGCTATCAAGTCTCTGGAACATGTGCAATTTGAAGCAACAATTGAATATTCTCGTAGAGGAGACCTTCATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 90 bp | CGAGAATATTCAATTGTTGCTTCAAATTGCACATGTTCCAGAGACTaGATAGCATTTTCTTGTCCTTCACAAGCTCTTGTTGGGATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: REYSIVASNCTCSRD*IAFSCPSQALVGIS Trigger: TGAAATCCCAACAAGAGCTTGTGAAGGACAAGAAAATGCTATCAAGTCTCTGGAACATGTGCAATTTGAAGCAACAATTGAATATTCTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 72 bp | AAATTGCACATGTTCCAGAGACTTGATAGCATTTTCTaGTCCTTCACAAGCTCTTGTTGGGATTTCAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: KLHMFQRLDSIF*SFTSSCWDFNN Trigger: ATTGTTGAAATCCCAACAAGAGCTTGTGAAGGACAAGAAAATGCTATCAAGTCTCTGGAACATGTGCAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 72 bp | TCAATTGTTGCTTCAAATTGCACATGTTCCAGAGACTaGATAGCATTTTCTTGTCCTTCACAAGCTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SIVASNCTCSRD*IAFSCPSQALV Trigger: AACAAGAGCTTGTGAAGGACAAGAAAATGCTATCAAGTCTCTGGAACATGTGCAATTTGAAGCAACAATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS CAA 72 bp | GTCTCCTCTACGAGAATATTCAATTGTTGCTTCAAATaGCACATGTTCCAGAGACTTGATAGCATTTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSSTRIFNCCFK*HMFQRLDSIFL Trigger: CAAGAAAATGCTATCAAGTCTCTGGAACATGTGCAATTTGAAGCAACAATTGAATATTCTCGTAGAGGAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS GCA 72 bp | TCTCCTCTACGAGAATATTCAATTGTTGCTTCAAATTaGACATGTTCCAGAGACTTGATAGCATTTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPLREYSIVASN*TCSRDLIAFSC Trigger: ACAAGAAAATGCTATCAAGTCTCTGGAACATGTGCAATTTGAAGCAACAATTGAATATTCTCGTAGAGGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||
| CDS TCA 72 bp | ATTGGATCATTGAAGAGATCCAATGCTGAGTCTTTTTaGACTGAACGTTTACTTCTCTCTTTTTCATACTGT | + |
|
Preference number: 6 (lower is better) Translates to: IGSLKRSNAESF*TERLLLSFSYC Trigger: ACAGTATGAAAAAGAGAGAAGTAAACGTTCAGTTCAAAAAGACTCAGCATTGGATCTCTTCAATGATCCAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022075.6 |
||