Pregenerated sensors for PCOLCE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015354Ensembl transcript IDs: ENSMUST00000015498.9
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGATGTCGGAGCTCGCTGCTCTTCCCCATCAGGCACTGGGTGGGTaGGTTCGCAGATGTTGGAGATCACAGCGCAGGCGCAGACCTTCC | + |
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Preference number: 1 (lower is better) Translates to: QMSELAALPHQALGG*VRRCWRSQRRRRPS Trigger: GGAAGGTCTGCGCCTGCGCTGTGATCTCCAACATCTGCGAACTCACCCACCCAGTGCCTGATGGGGAAGAGCAGCGAGCTCCGACATCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CCA 90 bp | AGATCACAGCGCAGGCGCAGACCTTCCACCAGTGAACTGGGGGCGTaGCTCACACATCCATCGCGTGAGGAGTTACTCAGCTCCATCTCT | + |
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Preference number: 1 (lower is better) Translates to: RSQRRRRPSTSELGA*LTHPSREELLSSIS Trigger: AGAGATGGAGCTGAGTAACTCCTCACGCGATGGATGTGTGAGCCACGCCCCCAGTTCACTGGTGGAAGGTCTGCGCCTGCGCTGTGATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CCA 90 bp | GATGTTGGAGATCACAGCGCAGGCGCAGACCTTCCACCAGTGAACTaGGGGCGTGGCTCACACATCCATCGCGTGAGGAGTTACTCAGCT | + |
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Preference number: 1 (lower is better) Translates to: DVGDHSAGADLPPVN*GRGSHIHRVRSYSA Trigger: AGCTGAGTAACTCCTCACGCGATGGATGTGTGAGCCACGCCCCCAGTTCACTGGTGGAAGGTCTGCGCCTGCGCTGTGATCTCCAACATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR GCA 90 bp | TCCACTGAGAGACAACAGCCTGTGCTCATTCCGACGTCCCTACAGTaGATTCTTGACAGGATTCCATTAACAGGTCTGACTGTCTACAGG | + |
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Preference number: 1 (lower is better) Translates to: STERQQPVLIPTSLQ*ILDRIPLTGLTVYR Trigger: CCTGTAGACAGTCAGACCTGTTAATGGAATCCTGTCAAGAATGCACTGTAGGGACGTCGGAATGAGCACAGGCTGTTGTCTCTCAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR GCA 90 bp | CTGTCAATGGAACGGATAGCTTGGATTACTGTTCTTGGTTTTTCCTaGAGGGTGACTCCAGACCCCACTGGTAACACAGGAGACACTGTG | + |
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Preference number: 1 (lower is better) Translates to: LSMERIAWITVLGFS*RVTPDPTGNTGDTV Trigger: CACAGTGTCTCCTGTGTTACCAGTGGGGTCTGGAGTCACCCTGCAGGAAAAACCAAGAACAGTAATCCAAGCTATCCGTTCCATTGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR TCA 90 bp | CACAAACAAGCTGTCCATAATAATTCATCAGTAAGATGTTTCCACTaGGAGACAACAGCCTGTGCTCATTCCGACGTCCCTACAGTGCAT | + |
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Preference number: 1 (lower is better) Translates to: HKQAVHNNSSVRCFH*ETTACAHSDVPTVH Trigger: ATGCACTGTAGGGACGTCGGAATGAGCACAGGCTGTTGTCTCTCAGTGGAAACATCTTACTGATGAATTATTATGGACAGCTTGTTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR GCA 90 bp | AGCGACATTGTGACCTTGGGTTTGAAATTAGGACTCTTAGAAGATTaGACTGCCTTTGCTGAGAAGTGTACTCTGGGGAATTCCCTTGTA | + |
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Preference number: 1 (lower is better) Translates to: SDIVTLGLKLGLLED*TAFAEKCTLGNSLV Trigger: TACAAGGGAATTCCCCAGAGTACACTTCTCAGCAAAGGCAGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR TCA 90 bp | CTTGGGTTTGAAATTAGGACTCTTAGAAGATTGCACTGCCTTTGCTaGGAAGTGTACTCTGGGGAATTCCCTTGTATATACCTGAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: LGFEIRTLRRLHCLC*EVYSGEFPCIYLSL Trigger: CAAGCTCAGGTATATACAAGGGAATTCCCCAGAGTACACTTCTCAGCAAAGGCAGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR TCA 90 bp | GTAGTCTTACCACCTGGCTGGACTACCTGTTTTAAACAACTGAGTTaGAAGATGAGCCAGTGTCATGAATTATTAACCACAGTCCCCTTA | + |
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Preference number: 1 (lower is better) Translates to: VVLPPGWTTCFKQLS*KMSQCHELLTTVPL Trigger: TAAGGGGACTGTGGTTAATAATTCATGACACTGGCTCATCTTTCAACTCAGTTGTTTAAAACAGGTAGTCCAGCCAGGTGGTAAGACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTACAGGGTGTCACTGCCCAGAGAAGCCACCGCCCAGCTGGTGCAGGATGCTGTACACCTGACCAGCTaGCAGGACAGCTGTTCAACT | + |
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Preference number: 2 (lower is better) Translates to: VYRVSLPREATAQLVQDAVHLTS*QDSCST Trigger: AGTTGAACAGCTGTCCTGCCAGCTGGTCAGGTGTAC...AGCATCCTGCACCAGCTGGGCGGTGGCTTCTCTGGGCAGTGACACCCTGTAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGCACCTTTCACAGCCCCTGGCCAGCAATCTCCTAGGAGGCAGACACTGTCACTTCCACCAGTGAACTaGGGGCGTGGCTCACACATC | + |
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Preference number: 2 (lower is better) Translates to: KAPFTAPGQQSPRRQTLSLPPVN*GRGSHI Trigger: GATGTGTGAGCCACGCCCCCAGTTCACTGGTGGAAG...TGACAGTGTCTGCCTCCTAGGAGATTGCTGGCCAGGGGCTGTGAAAGGTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR TCA 90 bp | GAATATCCTCCTACAGAGATGTATGTTCAAGCTTCCAGATGTCGGAGCTCGCTGCAGACCTTCCACCAGTaGACTGGGGGCGTGGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: EYPPTEMYVQASRCRSSLQTFHQ*TGGVAH Trigger: GTGAGCCACGCCCCCAGTTCACTGGTGGAAGGTCTG...CAGCGAGCTCCGACATCTGGAAGCTTGAACATACATCTCTGTAGGAGGATATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGCACCTTTCACAGCCCCTGGCCAGCAATCTCCTAGGAGGCAGACACTGTCATTGCACTGCCTTTGCTaGGAAGTGTACTCTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: KAPFTAPGQQSPRRQTLSLHCLC*EVYSGE Trigger: TTCCCCAGAGTACACTTCTCAGCAAAGGCAGTGCAA...TGACAGTGTCTGCCTCCTAGGAGATTGCTGGCCAGGGGCTGTGAAAGGTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CCA 90 bp | AGAAGCCACCGCCCAGCTGGTGCAGGATGCTCTAACCCATCCGTTCCTTTAGCTACTAAATGCTTCAAGTaGGAAGGTGCCTTCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RSHRPAGAGCSNPSVPLATKCFK*EGAFLL Trigger: CAGGAGGAAGGCACCTTCCCACTTGAAGCATTTAGT...AGCTAAAGGAACGGATGGGTTAGAGCATCCTGCACCAGCTGGGCGGTGGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR GCA 90 bp | GTCTACAGGGTGTCACTGCCCAGAGAAGCCACCGCCCAGCTGGTGCAGGATGCTACACCTCAGAGCAAATaGTTGAAGGTAACCAAATAT | + |
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Preference number: 2 (lower is better) Translates to: VYRVSLPREATAQLVQDATPQSK*LKVTKY Trigger: ATATTTGGTTACCTTCAAGCATTTGCTCTGAGGTGT...AGCATCCTGCACCAGCTGGGCGGTGGCTTCTCTGGGCAGTGACACCCTGTAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR TCA 90 bp | ATTATAGTGCTGCTGCACATAGTTGTTTTCTGGGTGCTGGGGAGCCAAACTCAGGTTTTTCCTGCAGGGTaGCTCCAGACCCCACTGGTA | + |
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Preference number: 2 (lower is better) Translates to: IIVLLHIVVFWVLGSQTQVFPAG*LQTPLV Trigger: TACCAGTGGGGTCTGGAGTCACCCTGCAGGAAAAAC...CTGAGTTTGGCTCCCCAGCACCCAGAAAACAACTATGTGCAGCAGCACTATAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR GCA 90 bp | ATTATAGTGCTGCTGCACATAGTTGTTTTCTGGGTGCTGGGGAGCCAAACTCAGGGAGTCTGGACTGGATaGCAGAGGGACACCTTTCTG | + |
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Preference number: 2 (lower is better) Translates to: IIVLLHIVVFWVLGSQTQGVWTG*QRDTFL Trigger: CAGAAAGGTGTCCCTCTGGCATCCAGTCCAGACTCC...CTGAGTTTGGCTCCCCAGCACCCAGAAAACAACTATGTGCAGCAGCACTATAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR GCA 90 bp | CATAGTTGTTTTCTGGGTGCTGGGGAGCCAAACTCAGGTCCTAAAGTTTGGGGGTTAGCCGTTGTCTTGTaGCAGAGCTGTCAATGGAAC | + |
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Preference number: 2 (lower is better) Translates to: HSCFLGAGEPNSGPKVWGLAVVL*QSCQWN Trigger: GTTCCATTGACAGCTCTGGCACAAGACAACGGCTAA...CCCCCAAACTTTAGGACCTGAGTTTGGCTCCCCAGCACCCAGAAAACAACTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CAA 90 bp | CCTGGGGCTTCGAGAGCCTTCTCTAGCGACATTGTGACCTTGGGTTaGAAATTAGGACTCTTAGAAGATTGCACTGCCTTTGCTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: PGASRAFSSDIVTLG*KLGLLEDCTAFAEK Trigger: CTTCTCAGCAAAGGCAGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCTAGAGAAGGCTCTCGAAGCCCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CAA 90 bp | CTTCCTCCTGGGGCTTCGAGAGCCTTCTCTAGCGACATTGTGACCTaGGGTTTGAAATTAGGACTCTTAGAAGATTGCACTGCCTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LPPGASRAFSSDIVT*GLKLGLLEDCTAFA Trigger: AGCAAAGGCAGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCTAGAGAAGGCTCTCGAAGCCCCAGGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR TCA 90 bp | TGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAACTGGAGTTAAGTTCAGAGACAAAATaGAGGAGTCTGGACTGGATG | + |
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Preference number: 2 (lower is better) Translates to: CNAQRDQKRVSDPLELELSSETK*RSLDWM Trigger: CATCCAGTCCAGACTCCTTCATTTTGTCTCTGAACT...TAACTCCAGTTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR TCA 90 bp | TCATATGCATGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAAGTAAGATGTTTCCACTaGGAGACAACAGCCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SYACNAQRDQKRVSDPLEVRCFH*ETTACA Trigger: AGCACAGGCTGTTGTCTCTCAGTGGAAACATCTTAC...TTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCATGCATATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAACTGGAGTTAGGACTCTTAGAAGATTaGACTGCCTTTGCTGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: CNAQRDQKRVSDPLELELGLLED*TAFAEK Trigger: CTTCTCAGCAAAGGCAGTGCAATCTTCTAAGAGTCC...TAACTCCAGTTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CCA 90 bp | TCATATGCATGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAATCATCTCCTGCATGCTaGGATCAAAGCTCTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SYACNAQRDQKRVSDPLESSPAC*DQSSLS Trigger: AGAGAGAGAGCTTTGATCCCAGCATGCAGGAGATGA...TTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCATGCATATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CCA 90 bp | AACTGGGAATTGCCATTTCCAACCAAAATAAGCGTTCCCCTTAGTTCTACAACTAAGGTGCCTTCCTCCTaGGGCTTCGAGAGCCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: NWELPFPTKISVPLSSTTKVPSS*GFESLL Trigger: GAGAAGGCTCTCGAAGCCCCAGGAGGAAGGCACCTT...AGTTGTAGAACTAAGGGGAACGCTTATTTTGGTTGGAAATGGCAATTCCCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAACTGGAGTTAATGTATTTCTCCCCCTaGATGTGTGTTATGTATGCA | + |
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Preference number: 2 (lower is better) Translates to: CNAQRDQKRVSDPLELELMYFSP*MCVMYA Trigger: TGCATACATAACACACATGCAGGGGGAGAAATACAT...TAACTCCAGTTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CAA 90 bp | TTGGAACTGGAGTTACAAATGCTTGTGAGTCACCACGAATGGGAATaGAACTGGGGTTCATCTGGAAGAGCAGTCAGTGCTTTTAAACCC | + |
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Preference number: 2 (lower is better) Translates to: LELELQMLVSHHEWE*NWGSSGRAVSAFKP Trigger: GGGTTTAAAAGCACTGACTGCTCTTCCAGATGAACCCCAGTTCAATTCCCATTCGTGGTGACTCACAAGCATTTGTAACTCCAGTTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR GCA 90 bp | TCTAGCGACATTGTGACCTTGGGTTTGAAATTAGGACTCTTAGAAGATTGCACTACACCTTTCTGTTCTTaGAGACAGAGACTACAGTCC | + |
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Preference number: 2 (lower is better) Translates to: SSDIVTLGLKLGLLEDCTTPFCS*RQRLQS Trigger: GGACTGTAGTCTCTGTCTGCAAGAACAGAAAGGTGT...AGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CAA 90 bp | ATATCTTGCTGTCACGTAAGTGTTTGTCAGCTCAAGAACTGGGAATaGCCATTTCCAACCAAAATAAGCGTTCCCCTTAGTTCTACAACT | + |
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Preference number: 2 (lower is better) Translates to: ISCCHVSVCQLKNWE*PFPTKISVPLSSTT Trigger: AGTTGTAGAACTAAGGGGAACGCTTATTTTGGTTGGAAATGGCAATTCCCAGTTCTTGAGCTGACAAACACTTACGTGACAGCAAGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CCA 72 bp | CGCAGGCGCAGACCTTCCACCAGTGAACTGGGGGCGTaGCTCACACATCCATCGCGTGAGGAGTTACTCAGC | + |
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Preference number: 3 (lower is better) Translates to: RRRRPSTSELGA*LTHPSREELLS Trigger: GCTGAGTAACTCCTCACGCGATGGATGTGTGAGCCACGCCCCCAGTTCACTGGTGGAAGGTCTGCGCCTGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CCA 72 bp | GATCACAGCGCAGGCGCAGACCTTCCACCAGTGAACTaGGGGCGTGGCTCACACATCCATCGCGTGAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: DHSAGADLPPVN*GRGSHIHRVRS Trigger: ACTCCTCACGCGATGGATGTGTGAGCCACGCCCCCAGTTCACTGGTGGAAGGTCTGCGCCTGCGCTGTGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CCA 72 bp | GTCGGAGCTCGCTGCTCTTCCCCATCAGGCACTGGGTaGGTGAGTTCGCAGATGTTGGAGATCACAGCGCAG | + |
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Preference number: 3 (lower is better) Translates to: VGARCSSPSGTG*VSSQMLEITAQ Trigger: CTGCGCTGTGATCTCCAACATCTGCGAACTCACCCACCCAGTGCCTGATGGGGAAGAGCAGCGAGCTCCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CCA 72 bp | AGATGTCGGAGCTCGCTGCTCTTCCCCATCAGGCACTaGGTGGGTGAGTTCGCAGATGTTGGAGATCACAGC | + |
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Preference number: 3 (lower is better) Translates to: RCRSSLLFPIRH*VGEFADVGDHS Trigger: GCTGTGATCTCCAACATCTGCGAACTCACCCACCCAGTGCCTGATGGGGAAGAGCAGCGAGCTCCGACATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CAA 90 bp | GTCTACAGGGTGTCACTGCCCAGAGAAGCCACCGCCCAGCTGGTGCAGGATGCTAGCGACATTGTGACCTaGGGTTTGAAATTAGGACTC | + |
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Preference number: 3 (lower is better) Translates to: VYRVSLPREATAQLVQDASDIVT*GLKLGL Trigger: GAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCT...AGCATCCTGCACCAGCTGGGCGGTGGCTTCTCTGGGCAGTGACACCCTGTAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR GCA 72 bp | AGATGTATGTTCAAGCTTCCAGATGTCGGAGCTCGCTaGTCTTCCCCATCAGGCACTGGGTGGGTGAGTTCG | + |
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Preference number: 3 (lower is better) Translates to: RCMFKLPDVGAR*SSPSGTGWVSS Trigger: CGAACTCACCCACCCAGTGCCTGATGGGGAAGAGCAGCGAGCTCCGACATCTGGAAGCTTGAACATACATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR GCA 72 bp | GGAGGCAGACACTGTCATACCCATTGCAGGTCTAGCTaGCGCTCGAGCAGTCCATCTCAACTGATACAGTCT | + |
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Preference number: 3 (lower is better) Translates to: GGRHCHTHCRSS*RSSSPSQLIQS Trigger: AGACTGTATCAGTTGAGATGGACTGCTCGAGCGGCAGCTAGACCTGCAATGGGTATGACAGTGTCTGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CCA 72 bp | CGTTGTCTATCTAGGGTTCCTCGTACCATCTTTCGATaGAGACAAGGCACCTTTCACAGCCCCTGGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: RCLSRVPRTIFR*RQGTFHSPWPA Trigger: TGCTGGCCAGGGGCTGTGAAAGGTGCCTTGTCTCCATCGAAAGATGGTACGAGGAACCCTAGATAGACAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CCA 72 bp | CTGGGTGCTGGGGAGCCAAACTCAGGTCCTAAAGTTTaGGGGGCAGCTAATTTAATGGCAGTCCTCCATGCA | + |
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Preference number: 3 (lower is better) Translates to: LGAGEPNSGPKV*GAANLMAVLHA Trigger: TGCATGGAGGACTGCCATTAAATTAGCTGCCCCCCAAACTTTAGGACCTGAGTTTGGCTCCCCAGCACCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR GCA 72 bp | CCGACCTTTCAGGGTTGTTTGCAACTGGCAGAGATCTaGCTGTCTTCATCTCCTGCATGCTGGGATCAAAGC | + |
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Preference number: 3 (lower is better) Translates to: PTFQGCLQLAEI*LSSSPACWDQS Trigger: GCTTTGATCCCAGCATGCAGGAGATGAAGACAGGCAGATCTCTGCCAGTTGCAAACAACCCTGAAAGGTCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CAA 90 bp | CATAGTTGTTTTCTGGGTGCTGGGGAGCCAAACTCAGGTCCTAAAGTTTGGGGGCATCCCAGGAGGAGTTaGAACCTTTTCTGTCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: HSCFLGAGEPNSGPKVWGHPRRS*NLFCPF Trigger: GAAGGGACAGAAAAGGTTCAAACTCCTCCTGGGATG...CCCCCAAACTTTAGGACCTGAGTTTGGCTCCCCAGCACCCAGAAAACAACTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CAA 90 bp | CATAGTTGTTTTCTGGGTGCTGGGGAGCCAAACTCAGGTCCTAAAGTTTGGGGGATCCTACATATAGGCTaGGTCAGTGGATACAGGTGC | + |
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Preference number: 3 (lower is better) Translates to: HSCFLGAGEPNSGPKVWGILHIG*VSGYRC Trigger: GCACCTGTATCCACTGACCAAGCCTATATGTAGGAT...CCCCCAAACTTTAGGACCTGAGTTTGGCTCCCCAGCACCCAGAAAACAACTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR TCA 72 bp | GCCTGTGCTCATTCCGACGTCCCTACAGTGCATTCTTaGCAGGATTCCATTAACAGGTCTGACTGTCTACAG | + |
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Preference number: 3 (lower is better) Translates to: ACAHSDVPTVHS*QDSINRSDCLQ Trigger: CTGTAGACAGTCAGACCTGTTAATGGAATCCTGTCAAGAATGCACTGTAGGGACGTCGGAATGAGCACAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR GCA 72 bp | GCAGTTCAGAGACAAAATGAAGGAGTCTGGACTGGATaGCAGAGGGACACCTTTCTGTTCTTGCAGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: AVQRQNEGVWTG*QRDTFLFLQTE Trigger: CTCTGTCTGCAAGAACAGAAAGGTGTCCCTCTGGCATCCAGTCCAGACTCCTTCATTTTGTCTCTGAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR CCA 72 bp | CCTGAGCTTGCAGTTCAGAGACAAAATGAAGGAGTCTaGACTGGATGCCAGAGGGACACCTTTCTGTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: PELAVQRQNEGV*TGCQRDTFLFL Trigger: CAAGAACAGAAAGGTGTCCCTCTGGCATCCAGTCCAGACTCCTTCATTTTGTCTCTGAACTGCAAGCTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CAA 90 bp | AGTAAGATGTTTCCACTGAGAGACAACAGCCTGTGCTCATTCCGACGTCCCTACCTGTCACGTAAGTGTTaGTCAGCTCAAGAACTGGGA | + |
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Preference number: 3 (lower is better) Translates to: SKMFPLRDNSLCSFRRPYLSRKC*SAQELG Trigger: TCCCAGTTCTTGAGCTGACAAACACTTACGTGACAG...GTAGGGACGTCGGAATGAGCACAGGCTGTTGTCTCTCAGTGGAAACATCTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR-3UTR CAA 90 bp | GAGGGACACCTTTCTGTTCTTGCAGACAGAGACTACAGTCCACTGACGTCACTGCCTCAGAGCAAATGCTaGAAGGTAACCAAATATCAT | + |
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Preference number: 3 (lower is better) Translates to: EGHLSVLADRDYSPLTSLPQSKC*KVTKYH Trigger: ATGATATTTGGTTACCTTCAAGCATTTGCTCTGAGG...CAGTGACGTCAGTGGACTGTAGTCTCTGTCTGCAAGAACAGAAAGGTGTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR TCA 72 bp | ACCTTTCTGTTCTTGCAGACAGAGACTACAGTCCACTaGCGTCACTGCATCAGTCTTAACCCTGGAACTCTT | + |
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Preference number: 3 (lower is better) Translates to: TFLFLQTETTVH*RHCISLNPGTL Trigger: AAGAGTTCCAGGGTTAAGACTGATGCAGTGACGTCAGTGGACTGTAGTCTCTGTCTGCAAGAACAGAAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| 3UTR GCA 72 bp | ATCAGTAAGATGTTTCCACTGAGAGACAACAGCCTGTaGTCATTCCGACGTCCCTACAGTGCATTCTTGACA | + |
|
Preference number: 3 (lower is better) Translates to: ISKMFPLRDNSL*SFRRPYSAFLT Trigger: TGTCAAGAATGCACTGTAGGGACGTCGGAATGAGCACAGGCTGTTGTCTCTCAGTGGAAACATCTTACTGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CCA 72 bp | TGTCTTGTGCCAGAGCTGTCAATGGAACGGATAGCTTaGATTACTGTTCTTGGTTTTTCCTGCAGGGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: CLVPELSMERIA*ITVLGFSCRVT Trigger: AGTCACCCTGCAGGAAAAACCAAGAACAGTAATCCAAGCTATCCGTTCCATTGACAGCTCTGGCACAAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR-3UTR CAA 90 bp | TCATATGCATGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAATGTATATACCTGAGCTaGCAGTTCAGAGACAAAATG | + |
|
Preference number: 3 (lower is better) Translates to: SYACNAQRDQKRVSDPLECIYLS*QFRDKM Trigger: CATTTTGTCTCTGAACTGCAAGCTCAGGTATATACA...TTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCATGCATATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAGATGTTTCCACTGAGAGACAACAGCCTGTGCTCATTCCGACGTCCCTACCTCAAGAACTGGGAATaGCCATTTCCAACCAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: SKMFPLRDNSLCSFRRPYLKNWE*PFPTKI Trigger: TATTTTGGTTGGAAATGGCAATTCCCAGTTCTTGAG...GTAGGGACGTCGGAATGAGCACAGGCTGTTGTCTCTCAGTGGAAACATCTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR TCA 72 bp | GCTGTCCATAATAATTCATCAGTAAGATGTTTCCACTaGGAGACAACAGCCTGTGCTCATTCCGACGTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: AVHNNSSVRCFH*ETTACAHSDVP Trigger: AGGGACGTCGGAATGAGCACAGGCTGTTGTCTCTCAGTGGAAACATCTTACTGATGAATTATTATGGACAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CCA 72 bp | AGTCCATCTCAACTGATACAGTCTGATTCAGTACAATaGGTACAAACAGCGAAGAGTACTTGGAGCTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SPSQLIQSDSVQ*VQTAKSTWSSL Trigger: CAGTGAGCTCCAAGTACTCTTCGCTGTTTGTACCCATTGTACTGAATCAGACTGTATCAGTTGAGATGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CCA 72 bp | TCTTGCTGTCACGTAAGTGTTTGTCAGCTCAAGAACTaGGAATTGCCATTTCCAACCAAAATAAGCGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SCCHVSVCQLKN*ELPFPTKISVP Trigger: GGGAACGCTTATTTTGGTTGGAAATGGCAATTCCCAGTTCTTGAGCTGACAAACACTTACGTGACAGCAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CCA 72 bp | CAAATGCTTGTGAGTCACCACGAATGGGAATTGAACTaGGGTTCATCTGGAAGAGCAGTCAGTGCTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QMLVSHHEWELN*GSSGRAVSAFK Trigger: TTTAAAAGCACTGACTGCTCTTCCAGATGAACCCCAGTTCAATTCCCATTCGTGGTGACTCACAAGCATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR GCA 72 bp | TACATGTGTTTTAACTACATCTGTGCATCATATGCATaGAATGCCCAGAGAGACCAGAAGAGGGTGTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: YMCFNYICASYA*NAQRDQKRVSD Trigger: ATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCATGCATATGATGCACAGATGTAGTTAAAACACATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR-3UTR CAA 90 bp | AACTGGGAATTGCCATTTCCAACCAAAATAAGCGTTCCCCTTAGTTCTACAACTAACAGCGAAGAGTACTaGGAGCTCACTGCTGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: NWELPFPTKISVPLSSTTNSEEY*ELTAEF Trigger: AAATTCAGCAGTGAGCTCCAAGTACTCTTCGCTGTT...AGTTGTAGAACTAAGGGGAACGCTTATTTTGGTTGGAAATGGCAATTCCCAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR TCA 72 bp | GAAATTAGGACTCTTAGAAGATTGCACTGCCTTTGCTaGGAAGTGTACTCTGGGGAATTCCCTTGTATATAC | + |
|
Preference number: 3 (lower is better) Translates to: EIRTLRRLHCLC*EVYSGEFPCIY Trigger: GTATATACAAGGGAATTCCCCAGAGTACACTTCTCAGCAAAGGCAGTGCAATCTTCTAAGAGTCCTAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR TCA 72 bp | CCACCTGGCTGGACTACCTGTTTTAAACAACTGAGTTaGAAGATGAGCCAGTGTCATGAATTATTAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: PPGWTTCFKQLS*KMSQCHELLTT Trigger: TGTGGTTAATAATTCATGACACTGGCTCATCTTTCAACTCAGTTGTTTAAAACAGGTAGTCCAGCCAGGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR TCA 72 bp | TATGTGTATATGTGTGTAGAGGCCAGAAATCCACGATaGGTGTCTTCCTCACTTATTCTCCACTGCATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: YVYMCVEARNPR*VSSSLILHCIF Trigger: AAAAATGCAGTGGAGAATAAGTGAGGAAGACACTCATCGTGGATTTCTGGCCTCTACACACATATACACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR GCA 90 bp | GGCGCAGACCTTCCACCAGTGAACTGGGGGCGTGGCTCACACATCCATCGCGTGCTGAGAAGGGGGCACTaGCTGCACACCACAGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GADLPPVNWGRGSHIHRVLRRGH*LHTTVS Trigger: GCTCACTGTGGTGTGCAGGCAGTGCCCCCTTCTCAG...CACGCGATGGATGTGTGAGCCACGCCCCCAGTTCACTGGTGGAAGGTCTGCGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCTCCATGGCCTGCATGACTCAGTTTCCCCAGTCTCCCTAGTTAGAAGTATCGAGACTGTGGCGTaGAAGCTCCCACCTCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLHGLHDSVSPVSLVRSIETVA*KLPPRV Trigger: CACTCGAGGTGGGAGCTTGCACGCCACAGTCTCGAT...ACTTCTAACTAGGGAGACTGGGGAAACTGAGTCATGCAGGCCATGGAGCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR CCA 90 bp | AGCCAGCTCCATGGCCTGCATGACTCAGTTTCCCCAGTCTCCCTAGTTAGAAGTCGCTGGCCATTGGCGTaGCCATTGTACACATCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SQLHGLHDSVSPVSLVRSRWPLA*PLYTST Trigger: CGTGGATGTGTACAATGGCCACGCCAATGGCCAGCG...ACTTCTAACTAGGGAGACTGGGGAAACTGAGTCATGCAGGCCATGGAGCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCACCTTTCACAGCCCCTGGCCAGCAATCTCCTAGGAGGCAGACACTGTCACGATACGCTGGCCATTaGCGTGGCCATTGTACACAT | + |
|
Preference number: 4 (lower is better) Translates to: KAPFTAPGQQSPRRQTLSRYAGH*RGHCTH Trigger: ATGTGTACAATGGCCACGCCAATGGCCAGCGTATCG...TGACAGTGTCTGCCTCCTAGGAGATTGCTGGCCAGGGGCTGTGAAAGGTGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | CACCTCGAGCACCGTTTCACGGGACTGGCTCCACAGTaGTATTTTCTGGGAGAACAAGGTTATCTGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLEHRFTGLAPQ*YFLGEQGYLAA Trigger: GGCAGCCAGATAACCTTGTTCTCCCAGAAAATACAACTGTGGAGCCAGTCCCGTGAAACGGTGCTCGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | GGCAGTCCTCCATGCAATCCTCCCGACCTTTCAGGGTaGTTTGCAACTGGCAGAGATCTGCCTGTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSPPCNPPDLSG*FATGRDLPVFI Trigger: GATGAAGACAGGCAGATCTCTGCCAGTTGCAAACAACCCTGAAAGGTCGGGAGGATTGCATGGAGGACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR TCA 90 bp | CATAGTTGTTTTCTGGGTGCTGGGGAGCCAAACTCAGGTCCTAAAGTTTGGGGGGAATGCCGCCACATGTaGAAACAGGTCTCTCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSCFLGAGEPNSGPKVWGECRHM*KQVSLA Trigger: CGCCAGAGAGACCTGTTTTCACATGTGGCGGCATTC...CCCCCAAACTTTAGGACCTGAGTTTGGCTCCCCAGCACCCAGAAAACAACTATG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR TCA 90 bp | GGGACTGGCTCCACAGTTGTATTTTCTGGGAGAACAAGGTTATCTGGCTGCCTTCAGAGTACGTTGCCATaGAGCCACTTCCCGCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGSTVVFSGRTRLSGCLQSTLP*SHFPRC Trigger: ACACCGCGGGAAGTGGCTTCATGGCAACGTACTCTG...AAGGCAGCCAGATAACCTTGTTCTCCCAGAAAATACAACTGTGGAGCCAGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR TCA 90 bp | ATTATAGTGCTGCTGCACATAGTTGTTTTCTGGGTGCTGGGGAGCCAAACTCAGCGTCTACACTTCTGCTaGCACAGGGCCACAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IIVLLHIVVFWVLGSQTQRLHFC*HRATVG Trigger: GCCCACTGTGGCCCTGTGTCAGCAGAAGTGTAGACG...CTGAGTTTGGCTCCCCAGCACCCAGAAAACAACTATGTGCAGCAGCACTATAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR CCA 90 bp | TGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAACTGGAGTTACACGATCGGCACAGGTaGACTGTCCCCACAGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: CNAQRDQKRVSDPLELELHDRHR*TVPTVL Trigger: AAGTACTGTGGGGACAGTCCACCTGTGCCGATCGTG...TAACTCCAGTTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR TCA 90 bp | GAGGGACACCTTTCTGTTCTTGCAGACAGAGACTACAGTCCACTGACGTCACTGCAAAGCTGTTTGGCATaGTTTTGCCACGCCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EGHLSVLADRDYSPLTSLQSCLA*FCHAHL Trigger: AAGATGGGCGTGGCAAAATCATGCCAAACAGCTTTG...CAGTGACGTCAGTGGACTGTAGTCTCTGTCTGCAAGAACAGAAAGGTGTCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | AATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTaGGAACTGGAGTTACAAATGCTTGTGAGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: NAQRDQKRVSDP*ELELQMLVSHH Trigger: GTGGTGACTCACAAGCATTTGTAACTCCAGTTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR CCA 90 bp | TGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAACTGGAGTTATTTGACAAAGCTGTTTaGCATGATTTTGCCACGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CNAQRDQKRVSDPLELELFDKAV*HDFATP Trigger: GGGCGTGGCAAAATCATGCCAAACAGCTTTGTCAAA...TAACTCCAGTTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR TCA 90 bp | TCTAGCGACATTGTGACCTTGGGTTTGAAATTAGGACTCTTAGAAGATTGCACTTTCTTGCCAGCCTGCTaGATGGCCAGGTTGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSDIVTLGLKLGLLEDCTFLPAC*MARLPS Trigger: GGAAGGCAACCTGGCCATTCAGCAGGCTGGCAAGAA...AGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR GCA 90 bp | TGGGCATCCCAGGAGGAGTTTGAACCTTTTCTGTCCCTTCCAACTGACTCCTGTCGGCTAACACGAAGTTaGTTGAACAGTAATTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: WASQEEFEPFLSLPTDSCRLTRS*LNSNCS Trigger: AGAGCAATTACTGTTCAAGCAACTTCGTGTTAGCCG...ACAGGAGTCAGTTGGAAGGGACAGAAAAGGTTCAAACTCCTCCTGGGATGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | GGGGCTTCGAGAGCCTTCTCTAGCGACATTGTGACCTaGGGTTTGAAATTAGGACTCTTAGAAGATTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GASRAFSSDIVT*GLKLGLLEDCT Trigger: AGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCTAGAGAAGGCTCTCGAAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | TTGTCTTGTGCCAGAGCTGTCAATGGAACGGATAGCTaGGATTACTGTTCTTGGTTTTTCCTGCAGGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSCARAVNGTDS*DYCSWFFLQGD Trigger: GTCACCCTGCAGGAAAAACCAAGAACAGTAATCCAAGCTATCCGTTCCATTGACAGCTCTGGCACAAGACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | GAGTTACAAATGCTTGTGAGTCACCACGAATGGGAATaGAACTGGGGTTCATCTGGAAGAGCAGTCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELQMLVSHHEWE*NWGSSGRAVSA Trigger: AGCACTGACTGCTCTTCCAGATGAACCCCAGTTCAATTCCCATTCGTGGTGACTCACAAGCATTTGTAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR GCA 90 bp | TGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAACTGGAGTTATTTTCCAAGTACATTTaGTATTCGGAGGGTACATTC | + |
|
Preference number: 4 (lower is better) Translates to: CNAQRDQKRVSDPLELELFSKYI*YSEGTF Trigger: GAATGTACCCTCCGAATAGCAAATGTACTTGGAAAA...TAACTCCAGTTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | GTGTACTCTGGGGAATTCCCTTGTATATACCTGAGCTaGCAGTTCAGAGACAAAATGAAGGAGTCTGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VYSGEFPCIYLS*QFRDKMKESGL Trigger: CAGTCCAGACTCCTTCATTTTGTCTCTGAACTGCAAGCTCAGGTATATACAAGGGAATTCCCCAGAGTACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | AGCTGGCAGGACAGCTGTTCAACTTACCTTAATATCTaGCTGTCACGTAAGTGTTTGTCAGCTCAAGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SWQDSCSTYLNI*LSRKCLSAQEL Trigger: CAGTTCTTGAGCTGACAAACACTTACGTGACAGCAAGATATTAAGGTAAGTTGAACAGCTGTCCTGCCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR GCA 90 bp | AACTGGGAATTGCCATTTCCAACCAAAATAAGCGTTCCCCTTAGTTCTACAACTTGCTTGAACAGTAATTaGTCTCCAGAGTCCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NWELPFPTKISVPLSSTTCLNSN*SPESPS Trigger: GGATGGGGACTCTGGAGAGCAATTACTGTTCAAGCA...AGTTGTAGAACTAAGGGGAACGCTTATTTTGGTTGGAAATGGCAATTCCCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | TGTCACGTAAGTGTTTGTCAGCTCAAGAACTGGGAATaGCCATTTCCAACCAAAATAAGCGTTCCCCTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CHVSVCQLKNWE*PFPTKISVPLS Trigger: ACTAAGGGGAACGCTTATTTTGGTTGGAAATGGCAATTCCCAGTTCTTGAGCTGACAAACACTTACGTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR TCA 90 bp | TCTAGCGACATTGTGACCTTGGGTTTGAAATTAGGACTCTTAGAAGATTGCACTTGCCCTCAGGAACTGTaGTTTTCCAAGTACATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSDIVTLGLKLGLLEDCTCPQEL*FSKYIC Trigger: GCAAATGTACTTGGAAAATCACAGTTCCTGAGGGCA...AGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| 3UTR CAA 72 bp | TCAACTTACCTTAATATCTTGCTGTCACGTAAGTGTTaGTCAGCTCAAGAACTGGGAATTGCCATTTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: STYLNILLSRKC*SAQELGIAISN Trigger: GTTGGAAATGGCAATTCCCAGTTCTTGAGCTGACAAACACTTACGTGACAGCAAGATATTAAGGTAAGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR CCA 90 bp | AACTGGGAATTGCCATTTCCAACCAAAATAAGCGTTCCCCTTAGTTCTACAACTTTTAACTCTATAAGCTaGTTCTTCGGAGCTATGATG | + |
|
Preference number: 4 (lower is better) Translates to: NWELPFPTKISVPLSSTTFNSIS*FFGAMM Trigger: CATCATAGCTCCGAAGAACCAGCTTATAGAGTTAAA...AGTTGTAGAACTAAGGGGAACGCTTATTTTGGTTGGAAATGGCAATTCCCAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS GCA 90 bp | CCGGTAAGAATGCCGCCACATGTGAAAACAGGTCTCTCTGGCGTCTaGGGCCGGGCCATCCGCGCGGTGGCCAGAAGCAGGCAGAGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PVRMPPHVKTGLSGV*GRAIRAVARSRQSG Trigger: CCCGCTCTGCCTGCTTCTGGCCACCGCGCGGATGGCCCGGCCGCAGACGCCAGAGAGACCTGTTTTCACATGTGGCGGCATTCTTACCGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS CCA 90 bp | AGACTCTCCGGTAAGAATGCCGCCACATGTGAAAACAGGTCTCTCTaGCGTCTGCGGCCGGGCCATCCGCGCGGTGGCCAGAAGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLSGKNAATCENRSL*RLRPGHPRGGQKQA Trigger: TGCCTGCTTCTGGCCACCGCGCGGATGGCCCGGCCGCAGACGCCAGAGAGACCTGTTTTCACATGTGGCGGCATTCTTACCGGAGAGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR CAA 90 bp | GGCGCAGACCTTCCACCAGTGAACTGGGGGCGTGGCTCACACATCCATCGCGTGCCGATACGCTGGCCATaGGCGTGGCCATTGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: GADLPPVNWGRGSHIHRVPIRWP*AWPLYT Trigger: TGTGTACAATGGCCACGCCAATGGCCAGCGTATCGG...CACGCGATGGATGTGTGAGCCACGCCCCCAGTTCACTGGTGGAAGGTCTGCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS GCA 90 bp | CCGTCATCTTGTTGCCGCTGGCTACGAGCGATCCAGGTCGGAATGTaGCACAGAAGCGCCCGATACGCTGGCCATTGGCGTGGCCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSCCRWLRAIQVGM*HRSARYAGHWRGHC Trigger: ACAATGGCCACGCCAATGGCCAGCGTATCGGGCGCTTCTGTGGCACATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS TCA 90 bp | ACCGGTCTCCTTTTCCATCTGGCGCAGCGGCAGAGTACGTTGCCATaGAGCCACTTCCCGCGGTGTTGGCGTCAGAAATCATTTGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: TGLLFHLAQRQSTLP*SHFPRCWRQKSFVP Trigger: CGGTACAAATGATTTCTGACGCCAACACCGCGGGAAGTGGCTTCATGGCAACGTACTCTGCCGCTGCGCCAGATGGAAAAGGAGACCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS CCA 90 bp | ATCCAGGTCGGAATGTGCCACAGAAGCGCCCGATACGCTGGCCATTaGCGTGGCCATTGTACACATCCACGAAGTCATAGCGACACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: IQVGMCHRSARYAGH*RGHCTHPRSHSDTG Trigger: ACCTGTGTCGCTATGACTTCGTGGATGTGTACAATGGCCACGCCAATGGCCAGCGTATCGGGCGCTTCTGTGGCACATTCCGACCTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS CCA 90 bp | CGGTGTTGGCGTCAGAAATCATTTGTACCGTCATCTTGTTGCCGCTaGCTACGAGCGATCCAGGTCGGAATGTGCCACAGAAGCGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RCWRQKSFVPSSCCR*LRAIQVGMCHRSAR Trigger: TCGGGCGCTTCTGTGGCACATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR CAA 90 bp | GGCGCAGACCTTCCACCAGTGAACTGGGGGCGTGGCTCACACATCCATCGCGTGTACTTCCCAATTCTTTaGGCGTCATTGACTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GADLPPVNWGRGSHIHRVYFPIL*ASLTSP Trigger: TGGGGAAGTCAATGACGCCAAAAGAATTGGGAAGTA...CACGCGATGGATGTGTGAGCCACGCCCCCAGTTCACTGGTGGAAGGTCTGCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS GCA 90 bp | TTCCCGCGGTGTTGGCGTCAGAAATCATTTGTACCGTCATCTTGTTaGCGCTGGCTACGAGCGATCCAGGTCGGAATGTGCCACAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: FPRCWRQKSFVPSSC*RWLRAIQVGMCHRS Trigger: GCTTCTGTGGCACATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACACCGCGGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGCCACCGCCCAGCTGGTGCAGGATGCTCTAACCCATCCGTTCCTTTAGCTTCTCGGTCTGGCCAGTaGGGAGTTTTAAAGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: RSHRPAGAGCSNPSVPLASRSGQ*GVLKVP Trigger: CGGTACCTTTAAAACTCCCAACTGGCCAGACCGAGA...AGCTAAAGGAACGGATGGGTTAGAGCATCCTGCACCAGCTGGGCGGTGGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS-3UTR CAA 90 bp | AGAAGCCACCGCCCAGCTGGTGCAGGATGCTCTAACCCATCCGTTCCTTTAGCTCTGTTTGGCATGATTTaGCCACGCCCATCTTCACCC | + |
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Preference number: 5 (lower is better) Translates to: RSHRPAGAGCSNPSVPLALFGMI*PRPSSP Trigger: GGGTGAAGATGGGCGTGGCAAAATCATGCCAAACAG...AGCTAAAGGAACGGATGGGTTAGAGCATCCTGCACCAGCTGGGCGGTGGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS GCA 90 bp | ACAATACCGGTCTCCTTTTCCATCTGGCGCAGCGGCAGAGTACGTTaGCATGAAGCCACTTCCCGCGGTGTTGGCGTCAGAAATCATTTG | + |
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Preference number: 5 (lower is better) Translates to: TIPVSFSIWRSGRVR*HEATSRGVGVRNHL Trigger: CAAATGATTTCTGACGCCAACACCGCGGGAAGTGGCTTCATGGCAACGTACTCTGCCGCTGCGCCAGATGGAAAAGGAGACCGGTATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS-3UTR CAA 90 bp | GAATATCCTCCTACAGAGATGTATGTTCAAGCTTCCAGATGTCGGAGCTCGCTGCGGGCGTGGTGGTGGTaGTGGGAAACTTTTTCGGCC | + |
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Preference number: 5 (lower is better) Translates to: EYPPTEMYVQASRCRSSLRAWWW*WETFSA Trigger: GGCCGAAAAAGTTTCCCACAACCACCACCACGCCCG...CAGCGAGCTCCGACATCTGGAAGCTTGAACATACATCTCTGTAGGAGGATATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS-3UTR CAA 90 bp | TGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAACTGGAGTTACACACCACAGTGAGCTaGACACTCATGTTCTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: CNAQRDQKRVSDPLELELHTTVS*TLMFLP Trigger: TGGCAAGAACATGAGTGTCAAGCTCACTGTGGTGTG...TAACTCCAGTTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CCA 90 bp | GAACTGAATAAGAAGTTCATTTCTCTCAGACACGATCGGCACAGGTaGACTGTCCCCACAGTACTTCCCAATTCTTTTGGCGTCATTGAC | + |
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Preference number: 5 (lower is better) Translates to: ELNKKFISLRHDRHR*TVPTVLPNSFGVID Trigger: GTCAATGACGCCAAAAGAATTGGGAAGTACTGTGGGGACAGTCCACCTGTGCCGATCGTGTCTGAGAGAAATGAACTTCTTATTCAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS-3UTR CAA 90 bp | TCATATGCATGCAATGCCCAGAGAGACCAGAAGAGGGTGTCAGATCCCTTGGAACTAACACGAAGTTGCTaGAACAGTAATTGCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SYACNAQRDQKRVSDPLELTRSC*NSNCSP Trigger: TGGAGAGCAATTACTGTTCAAGCAACTTCGTGTTAG...TTCCAAGGGATCTGACACCCTCTTCTGGTCTCTCTGGGCATTGCATGCATATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS-3UTR CAA 90 bp | TGGGCATCCCAGGAGGAGTTTGAACCTTTTCTGTCCCTTCCAACTGACTCCTGTATTTTCCAAGTACATTaGCTATTCGGAGGGTACATT | + |
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Preference number: 5 (lower is better) Translates to: WASQEEFEPFLSLPTDSCIFQVH*LFGGYI Trigger: AATGTACCCTCCGAATAGCAAATGTACTTGGAAAAT...ACAGGAGTCAGTTGGAAGGGACAGAAAAGGTTCAAACTCCTCCTGGGATGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS-3UTR CAA 90 bp | TCTAGCGACATTGTGACCTTGGGTTTGAAATTAGGACTCTTAGAAGATTGCACTCCATTGGCGTGGCCATaGTACACATCCACGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SSDIVTLGLKLGLLEDCTPLAWP*YTSTKS Trigger: TGACTTCGTGGATGTGTACAATGGCCACGCCAATGG...AGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS-3UTR CAA 90 bp | TCTAGCGACATTGTGACCTTGGGTTTGAAATTAGGACTCTTAGAAGATTGCACTGGCGTCAGAAATCATTaGTACCGTCATCTTGTTGCC | + |
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Preference number: 5 (lower is better) Translates to: SSDIVTLGLKLGLLEDCTGVRNH*YRHLVA Trigger: GGCAACAAGATGACGGTACAAATGATTTCTGACGCC...AGTGCAATCTTCTAAGAGTCCTAATTTCAAACCCAAGGTCACAATGTCGCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS GCA 72 bp | ATGCCGCCACATGTGAAAACAGGTCTCTCTGGCGTCTaGGGCCGGGCCATCCGCGCGGTGGCCAGAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: MPPHVKTGLSGV*GRAIRAVARSR Trigger: CCTGCTTCTGGCCACCGCGCGGATGGCCCGGCCGCAGACGCCAGAGAGACCTGTTTTCACATGTGGCGGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CCA 72 bp | GGTAAGAATGCCGCCACATGTGAAAACAGGTCTCTCTaGCGTCTGCGGCCGGGCCATCCGCGCGGTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: GKNAATCENRSL*RLRPGHPRGGQ Trigger: CTGGCCACCGCGCGGATGGCCCGGCCGCAGACGCCAGAGAGACCTGTTTTCACATGTGGCGGCATTCTTACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS GCA 72 bp | TGTTGCCGCTGGCTACGAGCGATCCAGGTCGGAATGTaGCACAGAAGCGCCCGATACGCTGGCCATTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: CCRWLRAIQVGM*HRSARYAGHWR Trigger: ACGCCAATGGCCAGCGTATCGGGCGCTTCTGTGGCACATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CCA 72 bp | CCAGGTCGGAATGTGCCACAGAAGCGCCCGATACGCTaGCCATTGGCGTGGCCATTGTACACATCCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: PGRNVPQKRPIR*PLAWPLYTSTK Trigger: CTTCGTGGATGTGTACAATGGCCACGCCAATGGCCAGCGTATCGGGCGCTTCTGTGGCACATTCCGACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 90 bp | GGCGCAGCGGCAGAGTACGTTGCCATGAAGCCACTTCCCGCGGTGTaGGCGTCAGAAATCATTTGTACCGTCATCTTGTTGCCGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GAAAEYVAMKPLPAV*ASEIICTVILLPLA Trigger: AGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACACCGCGGGAAGTGGCTTCATGGCAACGTACTCTGCCGCTGCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 90 bp | CCACTTCCCGCGGTGTTGGCGTCAGAAATCATTTGTACCGTCATCTaGTTGCCGCTGGCTACGAGCGATCCAGGTCGGAATGTGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: PLPAVLASEIICTVI*LPLATSDPGRNVPQ Trigger: CTGTGGCACATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACACCGCGGGAAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 90 bp | CGTTGCCATGAAGCCACTTCCCGCGGTGTTGGCGTCAGAAATCATTaGTACCGTCATCTTGTTGCCGCTGGCTACGAGCGATCCAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: RCHEATSRGVGVRNH*YRHLVAAGYERSRS Trigger: CGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACACCGCGGGAAGTGGCTTCATGGCAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS TCA 72 bp | CTTTTCCATCTGGCGCAGCGGCAGAGTACGTTGCCATaGAGCCACTTCCCGCGGTGTTGGCGTCAGAAATCA | + |
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Preference number: 6 (lower is better) Translates to: LFHLAQRQSTLP*SHFPRCWRQKS Trigger: TGATTTCTGACGCCAACACCGCGGGAAGTGGCTTCATGGCAACGTACTCTGCCGCTGCGCCAGATGGAAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CCA 72 bp | GGAATGTGCCACAGAAGCGCCCGATACGCTGGCCATTaGCGTGGCCATTGTACACATCCACGAAGTCATAGC | + |
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Preference number: 6 (lower is better) Translates to: GMCHRSARYAGH*RGHCTHPRSHS Trigger: GCTATGACTTCGTGGATGTGTACAATGGCCACGCCAATGGCCAGCGTATCGGGCGCTTCTGTGGCACATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CCA 72 bp | AAGGCGTCCTCCACAATACCGGTCTCCTTTTCCATCTaGCGCAGCGGCAGAGTACGTTGCCATGAAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: KASSTIPVSFSI*RSGRVRCHEAT Trigger: AGTGGCTTCATGGCAACGTACTCTGCCGCTGCGCCAGATGGAAAAGGAGACCGGTATTGTGGAGGACGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 90 bp | CTTCCCGCGGTGTTGGCGTCAGAAATCATTTGTACCGTCATCTTGTaGCCGCTGGCTACGAGCGATCCAGGTCGGAATGTGCCACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LPAVLASEIICTVIL*PLATSDPGRNVPQK Trigger: CTTCTGTGGCACATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACACCGCGGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 72 bp | GAAGCCACTTCCCGCGGTGTTGGCGTCAGAAATCATTaGTACCGTCATCTTGTTGCCGCTGGCTACGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: EATSRGVGVRNH*YRHLVAAGYER Trigger: TCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACACCGCGGGAAGTGGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS TCA 72 bp | TTGCTCTCCAGAGTCCCCATCCGTCTACACTTCTGCTaGCACAGGGCCACAGTGGGCTTTAGACCTGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: LLSRVPIRLHFC*HRATVGFRPVV Trigger: AACTACAGGTCTAAAGCCCACTGTGGCCCTGTGTCAGCAGAAGTGTAGACGGATGGGGACTCTGGAGAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 72 bp | GCGGTGTTGGCGTCAGAAATCATTTGTACCGTCATCTaGTTGCCGCTGGCTACGAGCGATCCAGGTCGGAAT | + |
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Preference number: 6 (lower is better) Translates to: AVLASEIICTVI*LPLATSDPGRN Trigger: ATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACACCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS GCA 72 bp | TGTTGGCGTCAGAAATCATTTGTACCGTCATCTTGTTaGCGCTGGCTACGAGCGATCCAGGTCGGAATGTGC | + |
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Preference number: 6 (lower is better) Translates to: CWRQKSFVPSSC*RWLRAIQVGMC Trigger: GCACATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CCA 72 bp | CGTCAGAAATCATTTGTACCGTCATCTTGTTGCCGCTaGCTACGAGCGATCCAGGTCGGAATGTGCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: RQKSFVPSSCCR*LRAIQVGMCHR Trigger: TCTGTGGCACATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 72 bp | GTGTTGGCGTCAGAAATCATTTGTACCGTCATCTTGTaGCCGCTGGCTACGAGCGATCCAGGTCGGAATGTG | + |
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Preference number: 6 (lower is better) Translates to: VLASEIICTVIL*PLATSDPGRNV Trigger: CACATTCCGACCTGGATCGCTCGTAGCCAGCGGCAACAAGATGACGGTACAAATGATTTCTGACGCCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS GCA 72 bp | CTGTGCCGGCTAACACGAAGTTGCTTGAACAGTAATTaGTCTCCAGAGTCCCCATCCGTCTACACTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LCRLTRSCLNSN*SPESPSVYTSA Trigger: AGCAGAAGTGTAGACGGATGGGGACTCTGGAGAGCAATTACTGTTCAAGCAACTTCGTGTTAGCCGGCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CCA 72 bp | CCACACACAAGTAACTCCCACGGGGTAATCTCGGTCTaGCCAGTTGGGAGTTTTAAAGGTACCGGAAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: PHTSNSHGVISV*PVGSFKGTGRF Trigger: AAACCTTCCGGTACCTTTAAAACTCCCAACTGGCCAGACCGAGATTACCCCGTGGGAGTTACTTGTGTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 72 bp | GCAGAGTACGTTGCCATGAAGCCACTTCCCGCGGTGTaGGCGTCAGAAATCATTTGTACCGTCATCTTGTTG | + |
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Preference number: 6 (lower is better) Translates to: AEYVAMKPLPAV*ASEIICTVILL Trigger: CAACAAGATGACGGTACAAATGATTTCTGACGCCAACACCGCGGGAAGTGGCTTCATGGCAACGTACTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 72 bp | ACAGGTGGACTGTCCCCACAGTACTTCCCAATTCTTTaGGCGTCATTGACTTCCCCACCGTTAAACACAGCC | + |
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Preference number: 6 (lower is better) Translates to: TGGLSPQYFPIL*ASLTSPPLNTA Trigger: GGCTGTGTTTAACGGTGGGGAAGTCAATGACGCCAAAAGAATTGGGAAGTACTGTGGGGACAGTCCACCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CCA 72 bp | AAGAAGTTCATTTCTCTCAGACACGATCGGCACAGGTaGACTGTCCCCACAGTACTTCCCAATTCTTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: KKFISLRHDRHR*TVPTVLPNSFG Trigger: GCCAAAAGAATTGGGAAGTACTGTGGGGACAGTCCACCTGTGCCGATCGTGTCTGAGAGAAATGAACTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS TCA 72 bp | AGTCATAGCGACACAGGTTGTCATTCTCCAGGTCTATaGATCGAAAATTCAAGACGACCACTTTGCCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SHSDTGCHSPGL*IENSRRPLCPQ Trigger: CTGAGGGCAAAGTGGTCGTCTTGAATTTTCGATTCATAGACCTGGAGAATGACAACCTGTGTCGCTATGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 90 bp | AAGACGACCACTTTGCCCTCAGGAACTGTGATTTTCCAAGTACATTaGCTATTCGGAGGGTACATTCCAGGAAAACCTTCACTGCCAATA | + |
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Preference number: 6 (lower is better) Translates to: KTTTLPSGTVIFQVH*LFGGYIPGKPSLPI Trigger: TATTGGCAGTGAAGGTTTTCCTGGAATGTACCCTCCGAATAGCAAATGTACTTGGAAAATCACAGTTCCTGAGGGCAAAGTGGTCGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 72 bp | ACTTTGCCCTCAGGAACTGTGATTTTCCAAGTACATTaGCTATTCGGAGGGTACATTCCAGGAAAACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TLPSGTVIFQVH*LFGGYIPGKPS Trigger: TGAAGGTTTTCCTGGAATGTACCCTCCGAATAGCAAATGTACTTGGAAAATCACAGTTCCTGAGGGCAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 72 bp | TCCAGGTCTATGAATCGAAAATTCAAGACGACCACTTaGCCCTCAGGAACTGTGATTTTCCAAGTACATTTG | + |
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Preference number: 6 (lower is better) Translates to: SRSMNRKFKTTT*PSGTVIFQVHL Trigger: CAAATGTACTTGGAAAATCACAGTTCCTGAGGGCAAAGTGGTCGTCTTGAATTTTCGATTCATAGACCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS CAA 72 bp | TTCTTGAACATTTTGACAAAGCTGTTTGGCATGATTTaGCCACGCCCATCTTCACCCACTTGTCCCATAATA | + |
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Preference number: 6 (lower is better) Translates to: FLNILTKLFGMI*PRPSSPTCPII Trigger: TATTATGGGACAAGTGGGTGAAGATGGGCGTGGCAAAATCATGCCAAACAGCTTTGTCAAAATGTTCAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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| CDS TCA 72 bp | AAACCATCCGCTGTTAAACTTAAGTCTGATAAGAACTaGATAAGAAGTTCATTTCTCTCAGACACGATCGGC | + |
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Preference number: 6 (lower is better) Translates to: KPSAVKLKSDKN*IRSSFLSDTIG Trigger: GCCGATCGTGTCTGAGAGAAATGAACTTCTTATTCAGTTCTTATCAGACTTAAGTTTAACAGCGGATGGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015498.9 |
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