Pregenerated sensors for PCNX4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034501Ensembl transcript IDs: ENSMUST00000044352.8
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | CTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTaGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACACTCT | + |
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Preference number: 2 (lower is better) Translates to: LTNSFADHMVFSQAF*GQRESLVKLQYSHS Trigger: AGAGTGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| 3UTR TCA 72 bp | ACACAGAGGACCTGTTGTCTGAGTCATTTGAACGGCTaGCAAACAGCTTTGCAGACCATATGGTTTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: TQRTCCLSHLNG*QTALQTIWFSL Trigger: GAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGACTCAGACAACAGGTCCTCTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCACTCAGCAGCAGTGGGTaGGCCTGGATGCTGTACCGT | + |
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Preference number: 4 (lower is better) Translates to: ADKQLCRPYGFLSGILGALSSSG*AWMLYR Trigger: ACGGTACAGCATCCAGGCTCACCCACTGCTGCTGAG...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | TTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCCATGGCGGTCTGCAGTaGCGCAGTCAGCCTGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: FERLTNSFADHMVFSQAFHGGLQ*RSQPGD Trigger: GTCCCCAGGCTGACTGCGGCACTGCAGACCGCCATG...GAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCACGGTGGCAGTGCTGGTaGGGCTTCTCCCGTATTTTC | + |
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Preference number: 4 (lower is better) Translates to: ADKQLCRPYGFLSGILGARWQCW*GFSRIF Trigger: GAAAATACGGGAGAAGCCTCACCAGCACTGCCACCG...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | TTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCGGCTGCAGTGCCCACTaGTCCTGGCCAGCTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: FERLTNSFADHMVFSQAFGCSAH*SWPALN Trigger: GTTCAGAGCTGGCCAGGAGCAGTGGGCACTGCAGCC...GAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | TCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCAGGTGCACACACAGGCTaGAGTGCCCACTGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SFERLTNSFADHMVFSQAGAHTG*SAHCSW Trigger: CCAGGAGCAGTGGGCACTGCAGCCTGTGTGTGCACC...TGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCATGGGCTTCAGCAGTGTaGCAGGATGTTTCCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ADKQLCRPYGFLSGILGAWASAV*QDVSCS Trigger: ACTGCAGGAAACATCCTGCCACACTGCTGAAGCCCA...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCACAGGAATCAGAAATTTaGCGGTCTCAGCACCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: ADKQLCRPYGFLSGILGAQESEI*RSQHQH Trigger: GTGCTGGTGCTGAGACCGTCAAATTTCTGATTCCTG...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACACTCTTAGAGAAGGGCGTCAGGTaGGGGCAGAGTCCCAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GILGAKRKSSEITILTLLEKGVR*GQSPKC Trigger: GCACTTGGGACTCTGCCCCCACCTGACGCCCTTCTC...TAAGAGTGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCAAAGATGGCCAGCTCTGAACTaGACGAGGAAACCCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: TNSFADHMVFSQAFLGQRWPALN*TRKPHQ Trigger: TTGGTGGGGTTTCCTCGTCCAGTTCAGAGCTGGCCA...TCTTTGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | CTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACAGTGCCGCAGTCAGCCTaGGGACCATCTGGTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LSGILGAKRKSSEITILTVPQSA*GPSGGR Trigger: TCTACCACCAGATGGTCCCCAGGCTGACTGCGGCAC...TGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | CTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACAGTTCCCACGAGAGGTTaGCCCACTGACCTCGAACGG | + |
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Preference number: 4 (lower is better) Translates to: LSGILGAKRKSSEITILTVPTRG*PTDLER Trigger: CCGTTCGAGGTCAGTGGGCCAACCTCTCGTGGGAAC...TGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCACCTCATCATCGTTGGTaGCATAAAGCAGTTCCCACG | + |
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Preference number: 4 (lower is better) Translates to: ADKQLCRPYGFLSGILGAPHHRW*HKAVPT Trigger: CGTGGGAACTGCTTTATGCCACCAACGATGATGAGG...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GAGTCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGTTCCTCAGCAGCAGTaGGTGAGCCTGGATGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ESFERLTNSFADHMVFSQVPQQQ*VSLDAV Trigger: TACAGCATCCAGGCTCACCCACTGCTGCTGAGGAAC...CTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | TTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCCACAGTAGCCTAGTTTaGGTCGAGGGCCTCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: FERLTNSFADHMVFSQAFHSSLV*VEGLQE Trigger: TTCTTGGAGGCCCTCGACTCAAACTAGGCTACTGTG...GAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | ACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCAAAGACTGGGTCTGGAATGTTaGTGTCTCTGTGGCGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: TNSFADHMVFSQAFLGQRLGLEC*CLCGGV Trigger: AACACCGCCACAGAGACAGCAACATTCCAGACCCAG...TCTTTGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCATTTGGGACCTGTGCCTaGAGAATGGTCATCTGGATT | + |
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Preference number: 4 (lower is better) Translates to: ADKQLCRPYGFLSGILGAFGTCA*RMVIWI Trigger: AATCCAGATGACCATTCTGCAGGCACAGGTCCCAAA...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | CTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACATCCACCAGCAGTCTGTaGTGGACACCATGTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LSGILGAKRKSSEITILTSTSSL*WTPCAL Trigger: CAGTGCACATGGTGTCCAGCACAGACTGCTGGTGGA...TGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCACAGGAGAATCAATTATaGCAGTCAGCACATTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ADKQLCRPYGFLSGILGAQENQL*QSAHSW Trigger: CCAGGAATGTGCTGACTGGCATAATTGATTCTCCTG...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | TCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCAATAACCGTAGGTGAGTaGACATGGATGAACCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SFERLTNSFADHMVFSQAITVGE*TWMNPQ Trigger: TTGGGGGTTCATCCATGTCCACTCACCTACGGTTAT...TGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GGTTTTCTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATAGAGACAGACACAGAGTaGAGCCCGTGTAAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GFLSGILGAKRKSSEITIETDTE*SPCKEL Trigger: CAGCTCCTTACACGGGCTCCACTCTGTGTCTGTCTC...TATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAGAAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACACTCTTAACCAGCAGTCTGTGCTaGACACCATGTGCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GILGAKRKSSEITILTLLTSSLC*TPCALL Trigger: CAGCAGTGCACATGGTGTCCAGCACAGACTGCTGGT...TAAGAGTGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | TCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCACCAAACTCTAAAACCTaGTCCACTGCCCAAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: SFERLTNSFADHMVFSQAPNSKT*STAQKR Trigger: TCTCTTTTGGGCAGTGGAGCAGGTTTTAGAGTTTGG...TGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | ACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCAAAGATCAGTTTTATTCTCCTaGGTGCTGGGCCTTTTAGAG | + |
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Preference number: 4 (lower is better) Translates to: TNSFADHMVFSQAFLGQRSVLFS*VLGLLE Trigger: CTCTAAAAGGCCCAGCACGCAGGAGAATAAAACTGA...TCTTTGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | ACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCAAAGACAAGGTTACTCGGTTTaGGAGCAAATACCATGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TNSFADHMVFSQAFLGQRQGYSV*EQIPCS Trigger: GGAACATGGTATTTGCTCCCAAACCGAGTAACCTTG...TCTTTGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | TCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCAAGGCAAAACTGTACATaGCGTCAAGACATTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: SFERLTNSFADHMVFSQARQNCT*RQDILQ Trigger: CTGGAGAATGTCTTGACGCCATGTACAGTTTTGCCT...TGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | AATACTCACACTCTTACTTTTCAGTTAGAGCCTCCTCTGATGTGCCTGCATTTGTTGGTACCAGTCTTCTaGAAACAAGGCGCTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: NTHTLTFQLEPPLMCLHLLVPVF*KQGAHL Trigger: GAGATGAGCGCCTTGTTTCCAGAAGACTGGTACCAA...CAAATGCAGGCACATCAGAGGAGGCTCTAACTGAAAAGTAAGAGTGTGAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | TTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTAGCAAAATCCATCTaGCAGCACCAATCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FERLTNSFADHMVFSQAFLAKSI*QHQSSG Trigger: TCCTGAAGATTGGTGCTGTCAGATGGATTTTGCTAA...GAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | GGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACACTCTTAAGAAAACAGGAAGTGTaGAGAGGGGCAGTAGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GILGAKRKSSEITILTLLRKQEV*RGAVEE Trigger: CTCCTCTACTGCCCCTCTTCACACTTCCTGTTTTCT...TAAGAGTGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | AATACTCACACTCTTACTTTTCAGTTAGAGCCTCCTCTGATGTGCCTGCATTTGTGTGGGTGTTCTCGCTaGAAAGCACTTTCAAACACT | + |
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Preference number: 4 (lower is better) Translates to: NTHTLTFQLEPPLMCLHLCGCSR*KALSNT Trigger: AGTGTTTGAAAGTGCTTTTCAGCGAGAACACCCACA...CAAATGCAGGCACATCAGAGGAGGCTCTAACTGAAAAGTAAGAGTGTGAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | CTAGTGAAATTACAATACTCACACTCTTACTTTTCAGTTAGAGCCTCCTCTGATCAGCTCTGGTTTTTCTaGGAGCCAATCCAAGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: LVKLQYSHSYFSVRASSDQLWFF*EPIQGA Trigger: GGCACCTTGGATTGGCTCTCAGAAAAACCAGAGCTG...ATCAGAGGAGGCTCTAACTGAAAAGTAAGAGTGTGAGTATTGTAATTTCACTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCATACAATAAACCTGTGTaGAAGGTCCACAGAAACAAA | + |
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Preference number: 4 (lower is better) Translates to: ADKQLCRPYGFLSGILGAYNKPV*KVHRNK Trigger: TTTGTTTCTGTGGACCTTGCACACAGGTTTATTGTA...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACACTCTTAGTAGGTGAGTGGACATaGATGAACCCCCAAGACCAA | + |
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Preference number: 4 (lower is better) Translates to: GILGAKRKSSEITILTLLVGEWT*MNPQDQ Trigger: TTGGTCTTGGGGGTTCATCCATGTCCACTCACCTAC...TAAGAGTGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | GAGTCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGGTGTTTACAATGAGTaGGTATTCTCCTATGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: ESFERLTNSFADHMVFSQGVYNE*VFSYAK Trigger: CTTTGCATAGGAGAATACTCACTCATTGTAAACACC...CTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | CTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACAATTGCTCTCTTCCACTaGTCTTCAGACACTAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LSGILGAKRKSSEITILTIALFH*SSDTKP Trigger: TGGCTTAGTGTCTGAAGAGCAGTGGAAGAGAGCAAT...TGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | CTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACACTCAGGATATCCAGTTaGTATAGAAGCGTTCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: LSGILGAKRKSSEITILTLRISS*YRSVPV Trigger: AACGGGAACGCTTCTATACCAACTGGATATCCTGAG...TGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCACAAGCCATCACTGTATaGACATACAAGTCTTTTAAA | + |
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Preference number: 4 (lower is better) Translates to: ADKQLCRPYGFLSGILGAQAITV*TYKSFK Trigger: TTTAAAAGACTTGTATGTCCATACAGTGATGGCTTG...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | GAGTCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGAAGATGTGCAAAATCTaGTTCATTTGCTCTAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: ESFERLTNSFADHMVFSQKMCKI*FICSRA Trigger: AGCTCTAGAGCAAATGAATCAGATTTTGCACATCTT...CTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | GGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACACTCTTAACCATCAGACCAGTCTaGATTTGCACTTTCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: GILGAKRKSSEITILTLLTIRPV*ICTFRV Trigger: GACTCTGAAAGTGCAAATTCAGACTGGTCTGATGGT...TAAGAGTGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR TCA 90 bp | CTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACAGTTTCAGTGTATACCTaGATGCTTTCCGAACTAGGT | + |
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Preference number: 4 (lower is better) Translates to: LSGILGAKRKSSEITILTVSVYT*MLSELG Trigger: ACCTAGTTCGGAAAGCATTCAGGTATACACTGAAAC...TGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | AATACTCACACTCTTACTTTTCAGTTAGAGCCTCCTCTGATGTGCCTGCATTTGGTGAGTATTCTCCTATaGAAAGTGTTATCCACCCAA | + |
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Preference number: 4 (lower is better) Translates to: NTHTLTFQLEPPLMCLHLVSILL*KVLSTQ Trigger: TTGGGTGGATAACACTTTGCATAGGAGAATACTCAC...CAAATGCAGGCACATCAGAGGAGGCTCTAACTGAAAAGTAAGAGTGTGAGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | GGTTTTCTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATAGCAGTTTCTGTATTCTaGCACACCATTCTGAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GFLSGILGAKRKSSEITIAVSVF*HTILKA Trigger: GGCTTTCAGAATGGTGTGGCAGAATACAGAAACTGC...TATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAGAAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR GCA 90 bp | AATACTCACACTCTTACTTTTCAGTTAGAGCCTCCTCTGATGTGCCTGCATTTGTTTTTCTGTCCACAATaGCAAAAGTACAGTCACAGC | + |
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Preference number: 4 (lower is better) Translates to: NTHTLTFQLEPPLMCLHLFFCPQ*QKYSHS Trigger: GCTGTGACTGTACTTTTGGCATTGTGGACAGAAAAA...CAAATGCAGGCACATCAGAGGAGGCTCTAACTGAAAAGTAAGAGTGTGAGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | CTAGTGAAATTACAATACTCACACTCTTACTTTTCAGTTAGAGCCTCCTCTGATTCCAAGAACAGTCTGTaGAAAGCGCTTCAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: LVKLQYSHSYFSVRASSDSKNSL*KALQQE Trigger: TTCCTGCTGAAGCGCTTTCCACAGACTGTTCTTGGA...ATCAGAGGAGGCTCTAACTGAAAAGTAAGAGTGTGAGTATTGTAATTTCACTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACACTCTTATGCAGAATGGTCATCTaGATTCTGAGAATCTACGGA | + |
|
Preference number: 4 (lower is better) Translates to: GILGAKRKSSEITILTLLCRMVI*ILRIYG Trigger: TCCGTAGATTCTCAGAATCCAGATGACCATTCTGCA...TAAGAGTGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| 3UTR CAA 72 bp | AGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTaGGGGCAAAGAGAAAGTCTAGTGAAATTACAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SFADHMVFSQAF*GQRESLVKLQY Trigger: GTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CCA 90 bp | GGTTTTCTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATATGTAAAGATCATTTTTaGGACCTGTGCCTGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFLSGILGAKRKSSEITICKDHF*DLCLQN Trigger: ATTCTGCAGGCACAGGTCCCAAAAATGATCTTTACA...TATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAGAAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | AGCCCACGACAGCCTGAGCGCCGCTTCTGGAGACCTGTGGGACGCTaGCATAGTGATGCAGCAGCCCAGCCTCCAGGAGAGCCATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPRQPERRFWRPVGR*HSDAAAQPPGEPCP Trigger: TGGGCATGGCTCTCCTGGAGGCTGGGCTGCTGCATCACTATGTCAGCGTCCCACAGGTCTCCAGAAGCGGCGCTCAGGCTGTCGTGGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 90 bp | GGGGACCATCTGGTGGTAGAACACACTGTCGGTGCACACACAGGCTaGAGTGCCCACTGCTCCTGGCCAGCTCTGAACTGGACGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GDHLVVEHTVGAHTG*SAHCSWPALNWTRK Trigger: TTTCCTCGTCCAGTTCAGAGCTGGCCAGGAGCAGTGGGCACTGCAGCCTGTGTGTGCACCGACAGTGTGTTCTACCACCAGATGGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | GATGCAGCAGCCCAGCCTCCAGGAGAGCCATGCCCAGCACAGCGATaGACAGAAAGCACTCCTTCCACGGGAACCAATGGCCTGAATTGC | + |
|
Preference number: 5 (lower is better) Translates to: DAAAQPPGEPCPAQR*TESTPSTGTNGLNC Trigger: GCAATTCAGGCCATTGGTTCCCGTGGAAGGAGTGCTTTCTGTTCATCGCTGTGCTGGGCATGGCTCTCCTGGAGGCTGGGCTGCTGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 90 bp | GTGGTAGAACACACTGTCGGTGCACACACAGGCTGCAGTGCCCACTaGTCCTGGCCAGCTCTGAACTGGACGAGGAAACCCCACCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VVEHTVGAHTGCSAH*SWPALNWTRKPHQE Trigger: TTCTTGGTGGGGTTTCCTCGTCCAGTTCAGAGCTGGCCAGGAGCAGTGGGCACTGCAGCCTGTGTGTGCACCGACAGTGTGTTCTACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | GAACACACTGTCGGTGCACACACAGGCTGCAGTGCCCACTGCTCCTaGCCAGCTCTGAACTGGACGAGGAAACCCCACCAAGAAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: EHTVGAHTGCSAHCS*PALNWTRKPHQENR Trigger: CCTGTTTTCTTGGTGGGGTTTCCTCGTCCAGTTCAGAGCTGGCCAGGAGCAGTGGGCACTGCAGCCTGTGTGTGCACCGACAGTGTGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | CAAGGGAGGGTCAGCGGCTTGTACAGTGAGGTTCCTCAGCAGCAGTaGGTGAGCCTGGATGCTGTACCGTTCCTCATCATCGTTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QGRVSGLYSEVPQQQ*VSLDAVPFLIIVGG Trigger: GCCACCAACGATGATGAGGAACGGTACAGCATCCAGGCTCACCCACTGCTGCTGAGGAACCTCACTGTACAAGCCGCTGACCCTCCCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | GCAGCAGTGGGTGAGCCTGGATGCTGTACCGTTCCTCATCATCGTTaGTGGCATAAAGCAGTTCCCACGAGAGGTTGGCCCACTGACCTC | + |
|
Preference number: 5 (lower is better) Translates to: AAVGEPGCCTVPHHR*WHKAVPTRGWPTDL Trigger: GAGGTCAGTGGGCCAACCTCTCGTGGGAACTGCTTTATGCCACCAACGATGATGAGGAACGGTACAGCATCCAGGCTCACCCACTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | CACAGCGATGAACAGAAAGCACTCCTTCCACGGGAACCAATGGCCTaGATTGCCTGGGCGAGCCTCATGACTGCTTCCTACCCTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HSDEQKALLPREPMA*IAWASLMTASYPVP Trigger: AGGCACAGGGTAGGAAGCAGTCATGAGGCTCGCCCAGGCAATTCAGGCCATTGGTTCCCGTGGAAGGAGTGCTTTCTGTTCATCGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | GTTCCTCATCATCGTTGGTGGCATAAAGCAGTTCCCACGAGAGGTTaGCCCACTGACCTCGAACGGCCTCAGCGTTCAGCTTCCCGATGT | + |
|
Preference number: 5 (lower is better) Translates to: VPHHRWWHKAVPTRG*PTDLERPQRSASRC Trigger: ACATCGGGAAGCTGAACGCTGAGGCCGTTCGAGGTCAGTGGGCCAACCTCTCGTGGGAACTGCTTTATGCCACCAACGATGATGAGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | GCAGTGGGTGAGCCTGGATGCTGTACCGTTCCTCATCATCGTTGGTaGCATAAAGCAGTTCCCACGAGAGGTTGGCCCACTGACCTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: AVGEPGCCTVPHHRW*HKAVPTRGWPTDLE Trigger: TTCGAGGTCAGTGGGCCAACCTCTCGTGGGAACTGCTTTATGCCACCAACGATGATGAGGAACGGTACAGCATCCAGGCTCACCCACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | AAGAGAAAATTGGGTATCCCAAGGGAGGGTCAGCGGCTTGTACAGTaGGGTTCCTCAGCAGCAGTGGGTGAGCCTGGATGCTGTACCGTT | + |
|
Preference number: 5 (lower is better) Translates to: KRKLGIPREGQRLVQ*GSSAAVGEPGCCTV Trigger: AACGGTACAGCATCCAGGCTCACCCACTGCTGCTGAGGAACCTCACTGTACAAGCCGCTGACCCTCCCTTGGGATACCCAATTTTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | ACCATTCTGAAAGCCCTGGTGAATCCAATGGAGACAGACACAGAGTaGAGCCCGTGTAAGGAGCTGTCCAGCGCAAGGAAGGCCACCATT | + |
|
Preference number: 5 (lower is better) Translates to: TILKALVNPMETDTE*SPCKELSSARKATI Trigger: AATGGTGGCCTTCCTTGCGCTGGACAGCTCCTTACACGGGCTCCACTCTGTGTCTGTCTCCATTGGATTCACCAGGGCTTTCAGAATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 90 bp | GTGTTATCCACCCAAACACAAAGAGCACAGCAGTCGCCCCAGGGCTaGCATACAGCAAGGTTACTCGGTTTGGGAGCAAATACCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLSTQTQRAQQSPQG*HTARLLGLGANTMF Trigger: GAACATGGTATTTGCTCCCAAACCGAGTAACCTTGCTGTATGGCAGCCCTGGGGCGACTGCTGTGCTCTTTGTGTTTGGGTGGATAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 90 bp | GAACTAGGTGGAACAGCTCTGGTTTTTCTGAGAGCCAATCCAAGGTaGCAGCCCAGGGTAAGCCACCATTGTAGACTCTTACTAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ELGGTALVFLRANPR*QPRVSHHCRLLLAD Trigger: GTCAGCTAGTAAGAGTCTACAATGGTGGCTTACCCTGGGCTGGCACCTTGGATTGGCTCTCAGAAAAACCAGAGCTGTTCCACCTAGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 90 bp | GTATCAAGGCTCCTGTTCCACCAGCAGTCTGTGCTGGACACCATGTaGACTGCTGATACAACCACAGTCTCCAGTAAAGCAGTTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSRLLFHQQSVLDTM*TADTTTVSSKAVSV Trigger: TACAGAAACTGCTTTACTGGAGACTGTGGTTGTATCAGCAGTGCACATGGTGTCCAGCACAGACTGCTGGTGGAACAGGAGCCTTGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | ACTGCTGCTCCAGCAGAAACGATGAACATGACCAATAACCGTAGGTaGGTGGACATGGATGAACCCCCAAGACCAAACTCTAAAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TAAPAETMNMTNNRR*VDMDEPPRPNSKTC Trigger: GCAGGTTTTAGAGTTTGGTCTTGGGGGTTCATCCATGTCCACTCACCTACGGTTATTGGTCATGTTCATCGTTTCTGCTGGAGCAGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCACCAGGAATCAGAAATTaGACGGTCTCAGCACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ADKQLCRPYGFLSGILGAPGIRN*TVSAPA Trigger: TGCTGGTGCTGAGACCGTCAAATTTCTGATTCCTGG...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | TTCTCCAGGTGCTCATTAAGGGAGCACACTTGTGGGTGTTCTCGCTaGAAAGCACTTTCAAACACTTCATCAACTCTCTGGGCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSRCSLREHTCGCSR*KALSNTSSTLWASA Trigger: TGCTGAAGCCCAGAGAGTTGATGAAGTGTTTGAAAGTGCTTTTCAGCGAGAACACCCACAAGTGTGCTCCCTTAATGAGCACCTGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 90 bp | ATCAGAAATTTGACGGTCTCAGCACCAGCACAACTTGTAAATTCGTaGTGGTCTTCCTCTGCTAAGATATCCCTGGTTCGCATCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IRNLTVSAPAQLVNS*WSSSAKISLVRILL Trigger: CAGGAGGATGCGAACCAGGGATATCTTAGCAGAGGAAGACCAGCACGAATTTACAAGTTGTGCTGGTGCTGAGACCGTCAAATTTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | TGGCGTCAAGACATTCTCCAGGTGCTCATTAAGGGAGCACACTTGTaGGTGTTCTCGCTGAAAAGCACTTTCAAACACTTCATCAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: WRQDILQVLIKGAHL*VFSLKSTFKHFINS Trigger: AGAGTTGATGAAGTGTTTGAAAGTGCTTTTCAGCGAGAACACCCACAAGTGTGCTCCCTTAATGAGCACCTGGAGAATGTCTTGACGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | CACATTCCTGGCATCAGAATACAGTTTCACAGGCAAAACTGTACATaGCGTCAAGACATTCTCCAGGTGCTCATTAAGGGAGCACACTTG | + |
|
Preference number: 5 (lower is better) Translates to: HIPGIRIQFHRQNCT*RQDILQVLIKGAHL Trigger: CAAGTGTGCTCCCTTAATGAGCACCTGGAGAATGTCTTGACGCCATGTACAGTTTTGCCTGTGAAACTGTATTCTGATGCCAGGAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | GGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACACTCTTATCTTCTCGCTGTCCCTaGTCAACAGCAGGGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GILGAKRKSSEITILTLLSSRCP*STAGSP Trigger: GGGACTCCCTGCTGTTGACAAGGGACAGCGAGAAGA...TAAGAGTGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | CTGGGTCTGGAATGTTGCTGTCTCTGTGGCGGTGTTTACAATGAGTaGGTATTCTCCTATGCAAAGTGTTATCCACCCAAACACAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGLECCCLCGGVYNE*VFSYAKCYPPKHKE Trigger: CTCTTTGTGTTTGGGTGGATAACACTTTGCATAGGAGAATACTCACTCATTGTAAACACCGCCACAGAGACAGCAACATTCCAGACCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 90 bp | TCCCAATATAACCGTCCTGTAAAGATCATTTTTGGGACCTGTGCCTaGAGAATGGTCATCTGGATTCTGAGAATCTACGGACCCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: SQYNRPVKIIFGTCA*RMVIWILRIYGPWN Trigger: ATTCCAGGGTCCGTAGATTCTCAGAATCCAGATGACCATTCTGCAGGCACAGGTCCCAAAAATGATCTTTACAGGACGGTTATATTGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | CCTTCAGGTTGTCAGGAGAATCAATTATGCCAGTCAGCACATTCCTaGCATCAGAATACAGTTTCACAGGCAAAACTGTACATGGCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGCQENQLCQSAHS*HQNTVSQAKLYMAS Trigger: TGACGCCATGTACAGTTTTGCCTGTGAAACTGTATTCTGATGCCAGGAATGTGCTGACTGGCATAATTGATTCTCCTGACAACCTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | GTGGAGTTAGACCTCCATTCCTCAGGTAAACTTAGCAAGCGAGACTaGGAACAACTAAACTCCACGAGAGGAATATATGCCACATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VELDLHSSGKLSKRD*EQLNSTRGIYATSS Trigger: AGAAGATGTGGCATATATTCCTCTCGTGGAGTTTAGTTGTTCCCAGTCTCGCTTGCTAAGTTTACCTGAGGAATGGAGGTCTAACTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | ACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCAAAGAGCAAGGTTACTCGGTTaGGGAGCAAATACCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNSFADHMVFSQAFLGQRARLLG*GANTMF Trigger: GAACATGGTATTTGCTCCCAAACCGAGTAACCTTGC...TCTTTGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | GAGTCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGGAGCGAATACAGTGTaGAGGACACACAAAGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESFERLTNSFADHMVFSQGANTV*RTHKVV Trigger: AACGACTTTGTGTGTCCTCAACACTGTATTCGCTCC...CTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | TATCCTGGGTCTGGAATGTTGCTGTCTCTGTGGCGGTGTTTACAATaGGTGAGTATTCTCCTATGCAAAGTGTTATCCACCCAAACACAA | + |
|
Preference number: 5 (lower is better) Translates to: YPGSGMLLSLWRCLQ*VSILLCKVLSTQTQ Trigger: TTGTGTTTGGGTGGATAACACTTTGCATAGGAGAATACTCACTCATTGTAAACACCGCCACAGAGACAGCAACATTCCAGACCCAGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 90 bp | AAAGCACTTTCAAACACTTCATCAACTCTCTGGGCTTCAGCAGTGTaGCAGGATGTTTCCTGCAGTTCTAACCCCTTAACATTAATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KALSNTSSTLWASAV*QDVSCSSNPLTLMQ Trigger: CTGCATTAATGTTAAGGGGTTAGAACTGCAGGAAACATCCTGCCACACTGCTGAAGCCCAGAGAGTTGATGAAGTGTTTGAAAGTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | GCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCATCAGTATCCACACTATaGAAAGTAACACCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ADKQLCRPYGFLSGILGASVSTL*KVTPSG Trigger: TCCTGATGGTGTTACTTTCAATAGTGTGGATACTGA...TGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | GAGTCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGGGCTAGGCACTCCATaGTCTATTCCAAATAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: ESFERLTNSFADHMVFSQGLGTP*SIPNKP Trigger: TGGTTTATTTGGAATAGACAATGGAGTGCCTAGCCC...CTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGACTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | ACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCAAAGAGGACACACAAAGTCGTaGTTGTTTTCCTATGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TNSFADHMVFSQAFLGQRGHTKS*LFSYAV Trigger: AACAGCATAGGAAAACAACAACGACTTTGTGTGTCC...TCTTTGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | CTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACAATTAAGGGAGCACACTaGTGGGTGTTCTCGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSGILGAKRKSSEITILTIKGAH*WVFSLK Trigger: TTTCAGCGAGAACACCCACAAGTGTGCTCCCTTAAT...TGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | ACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCTTGGGGCAAAGAGCTTTTCTTCTAGAATaGCTCTCTTCCACTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TNSFADHMVFSQAFLGQRAFLLE*LSSTAL Trigger: AAGAGCAGTGGAAGAGAGCAATTCTAGAAGAAAAGC...TCTTTGCCCCAAGAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | GAGTCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGCTTCAGGAGCTTGTTTaGCTTGTCATAGAATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESFERLTNSFADHMVFSQLQELV*LVIEYR Trigger: TCTGTATTCTATGACAAGCAAAACAAGCTCCTGAAG...CTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | CTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACTCACAGTTTTGAAGAGAAAATaGGGTATCCCAAGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSGILGAKRKSSEITILTVLKRK*GIPREG Trigger: ACCCTCCCTTGGGATACCCAATTTTCTCTTCAAAAC...TGTGAGTATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | AATGCCAAAAGTACAGTCACAGCAAACTGCAACTTAGTGATGAACTaGATCAAACGGTCTCGCATGATACCGATCAATAACAGCCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: NAKSTVTANCNLVMN*IKRSRMIPINNSLI Trigger: AATCAGGCTGTTATTGATCGGTATCATGCGAGACCGTTTGATTCAGTTCATCACTAAGTTGCAGTTTGCTGTGACTGTACTTTTGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | TTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGGCATTCAAAGATGTAGATGCTTaGAGTTTCTCTCAGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: FERLTNSFADHMVFSQAFKDVDA*SFSQYP Trigger: TGGATACTGAGAGAAACTCAAAGCATCTACATCTTT...GAATGCCTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | GAGTCATTTGAACGGCTGACAAACAGCTTTGCAGACCATATGGTTTTCTCTCAGCACACAAAGTCGTTGTaGTTTTCCTATGCTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ESFERLTNSFADHMVFSQHTKSL*FSYAVF Trigger: AAAAACAGCATAGGAAAACAACAACGACTTTGTGTG...CTGAGAGAAAACCATATGGTCTGCAAAGCTGTTTGTCAGCCGTTCAAATGACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | GGTTTTCTCTCAGGCATTCTTGGGGCAAAGAGAAAGTCTAGTGAAATTACAATACAGACCAGTCTGAATTaGCACTTTCAGAGTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GFLSGILGAKRKSSEITIQTSLN*HFQSLP Trigger: TGGAAGACTCTGAAAGTGCAAATTCAGACTGGTCTG...TATTGTAATTTCACTAGACTTTCTCTTTGCCCCAAGAATGCCTGAGAGAAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS-3UTR CAA 90 bp | AATACTCACACTCTTACTTTTCAGTTAGAGCCTCCTCTGATGTGCCTGCATTTGCTATTGGACCCAAACTaGCTTTATCAACCATTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NTHTLTFQLEPPLMCLHLLLDPN*LYQPLV Trigger: AACTAATGGTTGATAAAGCAAGTTTGGGTCCAATAG...CAAATGCAGGCACATCAGAGGAGGCTCTAACTGAAAAGTAAGAGTGTGAGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 90 bp | TTATCCTTTGCAATTTCCTCTAGAACACGTGACTTCTCTTCCGAGTaGAAGCATTCTAATTGCCTTAAAACAAATTGGTACCAGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSFAISSRTRDFSSE*KHSNCLKTNWYQSS Trigger: AGAAGACTGGTACCAATTTGTTTTAAGGCAATTAGAATGCTTTCACTCGGAAGAGAAGTCACGTGTTCTAGAGGAAATTGCAAAGGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | AGGAGGAGACCTAAACTTCCCGCCGCCATGGCGGTCTaGAGTGCCGCAGTCAGCCTGGGGACCATCTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRRPKLPAAMAV*SAAVSLGTIWW Trigger: CCACCAGATGGTCCCCAGGCTGACTGCGGCACTGCAGACCGCCATGGCGGCGGGAAGTTTAGGTCTCCTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | AGCCAGGTAGGAGGAGACCTAAACTTCCCGCCGCCATaGCGGTCTGCAGTGCCGCAGTCAGCCTGGGGACCA | + |
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Preference number: 6 (lower is better) Translates to: SQVGGDLNFPPP*RSAVPQSAWGP Trigger: TGGTCCCCAGGCTGACTGCGGCACTGCAGACCGCCATGGCGGCGGGAAGTTTAGGTCTCCTCCTACCTGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | CAGCCTGAGCGCCGCTTCTGGAGACCTGTGGGACGCTaGCATAGTGATGCAGCAGCCCAGCCTCCAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: QPERRFWRPVGR*HSDAAAQPPGE Trigger: CTCTCCTGGAGGCTGGGCTGCTGCATCACTATGTCAGCGTCCCACAGGTCTCCAGAAGCGGCGCTCAGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | CACACTGTCGGTGCACACACAGGCTGCAGTGCCCACTaGTCCTGGCCAGCTCTGAACTGGACGAGGAAACCC | + |
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Preference number: 6 (lower is better) Translates to: HTVGAHTGCSAH*SWPALNWTRKP Trigger: GGGTTTCCTCGTCCAGTTCAGAGCTGGCCAGGAGCAGTGGGCACTGCAGCCTGTGTGTGCACCGACAGTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | CTGGTGGTAGAACACACTGTCGGTGCACACACAGGCTaGAGTGCCCACTGCTCCTGGCCAGCTCTGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: LVVEHTVGAHTG*SAHCSWPALNW Trigger: CCAGTTCAGAGCTGGCCAGGAGCAGTGGGCACTGCAGCCTGTGTGTGCACCGACAGTGTGTTCTACCACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | TTGGGTATCCCAAGGGAGGGTCAGCGGCTTGTACAGTaGGGTTCCTCAGCAGCAGTGGGTGAGCCTGGATGC | + |
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Preference number: 6 (lower is better) Translates to: LGIPREGQRLVQ*GSSAAVGEPGC Trigger: GCATCCAGGCTCACCCACTGCTGCTGAGGAACCTCACTGTACAAGCCGCTGACCCTCCCTTGGGATACCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | ACACAGGCTGCAGTGCCCACTGCTCCTGGCCAGCTCTaGACTGGACGAGGAAACCCCACCAAGAAAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: TQAAVPTAPGQL*TGRGNPTKKTG Trigger: TCCTGTTTTCTTGGTGGGGTTTCCTCGTCCAGTTCAGAGCTGGCCAGGAGCAGTGGGCACTGCAGCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | CATCGTTGGTGGCATAAAGCAGTTCCCACGAGAGGTTaGCCCACTGACCTCGAACGGCCTCAGCGTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HRWWHKAVPTRG*PTDLERPQRSA Trigger: AGCTGAACGCTGAGGCCGTTCGAGGTCAGTGGGCCAACCTCTCGTGGGAACTGCTTTATGCCACCAACGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | GCGGCTTGTACAGTGAGGTTCCTCAGCAGCAGTGGGTaGGCCTGGATGCTGTACCGTTCCTCATCATCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AACTVRFLSSSG*AWMLYRSSSSL Trigger: CAACGATGATGAGGAACGGTACAGCATCCAGGCTCACCCACTGCTGCTGAGGAACCTCACTGTACAAGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | GAAAGCACTCCTTCCACGGGAACCAATGGCCTGAATTaGCTGGGCGAGCCTCATGACTGCTTCCTACCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ESTPSTGTNGLN*LGEPHDCFLPC Trigger: ACAGGGTAGGAAGCAGTCATGAGGCTCGCCCAGGCAATTCAGGCCATTGGTTCCCGTGGAAGGAGTGCTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | GGTGAGCCTGGATGCTGTACCGTTCCTCATCATCGTTaGTGGCATAAAGCAGTTCCCACGAGAGGTTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: GEPGCCTVPHHR*WHKAVPTRGWP Trigger: GGGCCAACCTCTCGTGGGAACTGCTTTATGCCACCAACGATGATGAGGAACGGTACAGCATCCAGGCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | GTCAGCGGCTTGTACAGTGAGGTTCCTCAGCAGCAGTaGGTGAGCCTGGATGCTGTACCGTTCCTCATCATC | + |
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Preference number: 6 (lower is better) Translates to: VSGLYSEVPQQQ*VSLDAVPFLII Trigger: GATGATGAGGAACGGTACAGCATCCAGGCTCACCCACTGCTGCTGAGGAACCTCACTGTACAAGCCGCTGAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 90 bp | GCACAGCAGTCGCCCCAGGGCTGCCATACAGCAAGGTTACTCGGTTaGGGAGCAAATACCATGTTCCAAGACCACACACTAGCCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AQQSPQGCHTARLLG*GANTMFQDHTLAQQ Trigger: TTGCTGGGCTAGTGTGTGGTCTTGGAACATGGTATTTGCTCCCAAACCGAGTAACCTTGCTGTATGGCAGCCCTGGGGCGACTGCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | CTTCCTCTGCTAAGATATCCCTGGTTCGCATCCTCCTaGCCACCACCGACTTGCTCCTGGCGTACACGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LPLLRYPWFASS*PPPTCSWRTRL Trigger: TAAGCGTGTACGCCAGGAGCAAGTCGGTGGTGGTCAGGAGGATGCGAACCAGGGATATCTTAGCAGAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | GAACAGAAAGCACTCCTTCCACGGGAACCAATGGCCTaGATTGCCTGGGCGAGCCTCATGACTGCTTCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: EQKALLPREPMA*IAWASLMTASY Trigger: GTAGGAAGCAGTCATGAGGCTCGCCCAGGCAATTCAGGCCATTGGTTCCCGTGGAAGGAGTGCTTTCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | GAGCCTGGATGCTGTACCGTTCCTCATCATCGTTGGTaGCATAAAGCAGTTCCCACGAGAGGTTGGCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: EPGCCTVPHHRW*HKAVPTRGWPT Trigger: AGTGGGCCAACCTCTCGTGGGAACTGCTTTATGCCACCAACGATGATGAGGAACGGTACAGCATCCAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 72 bp | AGAGAAAATTGGGTATCCCAAGGGAGGGTCAGCGGCTaGTACAGTGAGGTTCCTCAGCAGCAGTGGGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RENWVSQGRVSG*YSEVPQQQWVS Trigger: GCTCACCCACTGCTGCTGAGGAACCTCACTGTACAAGCCGCTGACCCTCCCTTGGGATACCCAATTTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | ACCCAAACACAAAGAGCACAGCAGTCGCCCCAGGGCTaGCATACAGCAAGGTTACTCGGTTTGGGAGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: TQTQRAQQSPQG*HTARLLGLGAN Trigger: ATTTGCTCCCAAACCGAGTAACCTTGCTGTATGGCAGCCCTGGGGCGACTGCTGTGCTCTTTGTGTTTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | TTCCTGTATCAAGGCTCCTGTTCCACCAGCAGTCTGTaGTGGACACCATGTGCACTGCTGATACAACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: FLYQGSCSTSSL*WTPCALLIQPQ Trigger: CTGTGGTTGTATCAGCAGTGCACATGGTGTCCAGCACAGACTGCTGGTGGAACAGGAGCCTTGATACAGGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | CTGTATCAAGGCTCCTGTTCCACCAGCAGTCTGTGCTaGACACCATGTGCACTGCTGATACAACCACAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LYQGSCSTSSLC*TPCALLIQPQS Trigger: AGACTGTGGTTGTATCAGCAGTGCACATGGTGTCCAGCACAGACTGCTGGTGGAACAGGAGCCTTGATACAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 72 bp | TCGCCCCAGGGCTGCCATACAGCAAGGTTACTCGGTTaGGGAGCAAATACCATGTTCCAAGACCACACACTA | + |
|
Preference number: 6 (lower is better) Translates to: SPQGCHTARLLG*GANTMFQDHTL Trigger: TAGTGTGTGGTCTTGGAACATGGTATTTGCTCCCAAACCGAGTAACCTTGCTGTATGGCAGCCCTGGGGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | GGCAAAACTGTACATGGCGTCAAGACATTCTCCAGGTaGTCATTAAGGGAGCACACTTGTGGGTGTTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GKTVHGVKTFSR*SLREHTCGCSR Trigger: GCGAGAACACCCACAAGTGTGCTCCCTTAATGAGCACCTGGAGAATGTCTTGACGCCATGTACAGTTTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | GGAACAGCTCTGGTTTTTCTGAGAGCCAATCCAAGGTaGCAGCCCAGGGTAAGCCACCATTGTAGACTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: GTALVFLRANPR*QPRVSHHCRLL Trigger: TAAGAGTCTACAATGGTGGCTTACCCTGGGCTGGCACCTTGGATTGGCTCTCAGAAAAACCAGAGCTGTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 72 bp | CAGTCTTCTGGAAACAAGGCGCTCATCTCTAGGATCTaGGAACGGGGTGTGGAGTTAGACCTCCATTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: QSSGNKALISRI*ERGVELDLHSS Trigger: TGAGGAATGGAGGTCTAACTCCACACCCCGTTCCAAGATCCTAGAGATGAGCGCCTTGTTTCCAGAAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | TTGACGGTCTCAGCACCAGCACAACTTGTAAATTCGTaGTGGTCTTCCTCTGCTAAGATATCCCTGGTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LTVSAPAQLVNS*WSSSAKISLVR Trigger: GCGAACCAGGGATATCTTAGCAGAGGAAGACCAGCACGAATTTACAAGTTGTGCTGGTGCTGAGACCGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 72 bp | ACGAGAGGAATATATGCCACATCTTCTCGCTGTCCCTaGTCAACAGCAGGGAGTCCCAATATAACCGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: TRGIYATSSRCP*STAGSPNITVL Trigger: CAGGACGGTTATATTGGGACTCCCTGCTGTTGACAAGGGACAGCGAGAAGATGTGGCATATATTCCTCTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | AGACTGGGAACAACTAAACTCCACGAGAGGAATATATaGCACATCTTCTCGCTGTCCCTTGTCAACAGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RLGTTKLHERNI*HIFSLSLVNSR Trigger: CCTGCTGTTGACAAGGGACAGCGAGAAGATGTGGCATATATTCCTCTCGTGGAGTTTAGTTGTTCCCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 90 bp | AATTGGTACCAGTCTTCTGGAAACAAGGCGCTCATCTCTAGGATCTaGGAACGGGGTGTGGAGTTAGACCTCCATTCCTCAGGTAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: NWYQSSGNKALISRI*ERGVELDLHSSGKL Trigger: AAGTTTACCTGAGGAATGGAGGTCTAACTCCACACCCCGTTCCAAGATCCTAGAGATGAGCGCCTTGTTTCCAGAAGACTGGTACCAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 90 bp | ACATGGCGTCAAGACATTCTCCAGGTGCTCATTAAGGGAGCACACTaGTGGGTGTTCTCGCTGAAAAGCACTTTCAAACACTTCATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: TWRQDILQVLIKGAH*WVFSLKSTFKHFIN Trigger: GTTGATGAAGTGTTTGAAAGTGCTTTTCAGCGAGAACACCCACAAGTGTGCTCCCTTAATGAGCACCTGGAGAATGTCTTGACGCCATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | TTGGGACCTGTGCCTGCAGAATGGTCATCTGGATTCTaGGAATCTACGGACCCTGGAATAGGTAACTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LGPVPAEWSSGF*ESTDPGIGNFV Trigger: TACAAAGTTACCTATTCCAGGGTCCGTAGATTCTCAGAATCCAGATGACCATTCTGCAGGCACAGGTCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | GACATTCTCCAGGTGCTCATTAAGGGAGCACACTTGTaGGTGTTCTCGCTGAAAAGCACTTTCAAACACTTC | + |
|
Preference number: 6 (lower is better) Translates to: DILQVLIKGAHL*VFSLKSTFKHF Trigger: GAAGTGTTTGAAAGTGCTTTTCAGCGAGAACACCCACAAGTGTGCTCCCTTAATGAGCACCTGGAGAATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | GACCTCCATTCCTCAGGTAAACTTAGCAAGCGAGACTaGGAACAACTAAACTCCACGAGAGGAATATATGCC | + |
|
Preference number: 6 (lower is better) Translates to: DLHSSGKLSKRD*EQLNSTRGIYA Trigger: GGCATATATTCCTCTCGTGGAGTTTAGTTGTTCCCAGTCTCGCTTGCTAAGTTTACCTGAGGAATGGAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 72 bp | CAAGACATTCTCCAGGTGCTCATTAAGGGAGCACACTaGTGGGTGTTCTCGCTGAAAAGCACTTTCAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: QDILQVLIKGAH*WVFSLKSTFKH Trigger: GTGTTTGAAAGTGCTTTTCAGCGAGAACACCCACAAGTGTGCTCCCTTAATGAGCACCTGGAGAATGTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 72 bp | ACCCCAGGCAGAACAAGCATGGCTTTTCTTCTAGAATaGCTCTCTTCCACTGCTCTTCAGACACTAAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: TPGRTSMAFLLE*LSSTALQTLSQ Trigger: TTGGCTTAGTGTCTGAAGAGCAGTGGAAGAGAGCAATTCTAGAAGAAAAGCCATGCTTGTTCTGCCTGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | TGCTCATTAAGGGAGCACACTTGTGGGTGTTCTCGCTaGAAAGCACTTTCAAACACTTCATCAACTCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CSLREHTCGCSR*KALSNTSSTLW Trigger: CCAGAGAGTTGATGAAGTGTTTGAAAGTGCTTTTCAGCGAGAACACCCACAAGTGTGCTCCCTTAATGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS GCA 72 bp | AACCGTCCTGTAAAGATCATTTTTGGGACCTGTGCCTaGAGAATGGTCATCTGGATTCTGAGAATCTACGGA | + |
|
Preference number: 6 (lower is better) Translates to: NRPVKIIFGTCA*RMVIWILRIYG Trigger: TCCGTAGATTCTCAGAATCCAGATGACCATTCTGCAGGCACAGGTCCCAAAAATGATCTTTACAGGACGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | TTATTCTCCTGCGTGCTGGGCCTTTTAGAGCAGTGCTaGATAAGCACCCACACAAGTACCTTAATAAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: LFSCVLGLLEQC*ISTHTSTLIRS Trigger: TGATCTTATTAAGGTACTTGTGTGGGTGCTTATTCAGCACTGCTCTAAAAGGCCCAGCACGCAGGAGAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | AGTTTCAGTGTATACCTGAATGCTTTCCGAACTAGGTaGAACAGCTCTGGTTTTTCTGAGAGCCAATCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SFSVYLNAFRTR*NSSGFSESQSK Trigger: CTTGGATTGGCTCTCAGAAAAACCAGAGCTGTTCCACCTAGTTCGGAAAGCATTCAGGTATACACTGAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 72 bp | CCAATGTACCAGTCTCTCTCGTACTCTCTGAGGCAGTaGGTCAGTTCTTTAAAGTCTTCTATTGGACCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PMYQSLSYSLRQ*VSSLKSSIGPK Trigger: TTTGGGTCCAATAGAAGACTTTAAAGAACTGACCAACTGCCTCAGAGAGTACGAGAGAGACTGGTACATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 90 bp | GACACTAAGCCAATGTACCAGTCTCTCTCGTACTCTCTGAGGCAGTaGGTCAGTTCTTTAAAGTCTTCTATTGGACCCAAACTTGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: DTKPMYQSLSYSLRQ*VSSLKSSIGPKLAL Trigger: TAAAGCAAGTTTGGGTCCAATAGAAGACTTTAAAGAACTGACCAACTGCCTCAGAGAGTACGAGAGAGACTGGTACATTGGCTTAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | GAATGTTGCTGTCTCTGTGGCGGTGTTTACAATGAGTaGGTATTCTCCTATGCAAAGTGTTATCCACCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: ECCCLCGGVYNE*VFSYAKCYPPK Trigger: TTTGGGTGGATAACACTTTGCATAGGAGAATACTCACTCATTGTAAACACCGCCACAGAGACAGCAACATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CCA 72 bp | TGTCAGGAGAATCAATTATGCCAGTCAGCACATTCCTaGCATCAGAATACAGTTTCACAGGCAAAACTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: CQENQLCQSAHS*HQNTVSQAKLY Trigger: GTACAGTTTTGCCTGTGAAACTGTATTCTGATGCCAGGAATGTGCTGACTGGCATAATTGATTCTCCTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | AGTACAGTCACAGCAAACTGCAACTTAGTGATGAACTaGATCAAACGGTCTCGCATGATACCGATCAATAAC | + |
|
Preference number: 6 (lower is better) Translates to: STVTANCNLVMN*IKRSRMIPINN Trigger: GTTATTGATCGGTATCATGCGAGACCGTTTGATTCAGTTCATCACTAAGTTGCAGTTTGCTGTGACTGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 72 bp | AATCCATCTGACAGCACCAATCTTCAGGAGCTTGTTTaGCTTGTCATAGAATACAGACACAGCGTGTATATC | + |
|
Preference number: 6 (lower is better) Translates to: NPSDSTNLQELV*LVIEYRHSVYI Trigger: GATATACACGCTGTGTCTGTATTCTATGACAAGCAAAACAAGCTCCTGAAGATTGGTGCTGTCAGATGGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 90 bp | ACCCACACAAGTACCTTAATAAGATCATCTTTAAATTCCTTCAGGTaGTCAGGAGAATCAATTATGCCAGTCAGCACATTCCTGGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: THTSTLIRSSLNSFR*SGESIMPVSTFLAS Trigger: TGATGCCAGGAATGTGCTGACTGGCATAATTGATTCTCCTGACAACCTGAAGGAATTTAAAGATGATCTTATTAAGGTACTTGTGTGGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 90 bp | AAGCCATCACTGTATGGACATACAAGTCTTTTAAAGCTTTATCCTTaGCAATTTCCTCTAGAACACGTGACTTCTCTTCCGAGTGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: KPSLYGHTSLLKLYP*QFPLEHVTSLPSES Trigger: GCTTTCACTCGGAAGAGAAGTCACGTGTTCTAGAGGAAATTGCAAAGGATAAAGCTTTAAAAGACTTGTATGTCCATACAGTGATGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS TCA 72 bp | GCAATTTCCTCTAGAACACGTGACTTCTCTTCCGAGTaGAAGCATTCTAATTGCCTTAAAACAAATTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AISSRTRDFSSE*KHSNCLKTNWY Trigger: GTACCAATTTGTTTTAAGGCAATTAGAATGCTTTCACTCGGAAGAGAAGTCACGTGTTCTAGAGGAAATTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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| CDS CAA 72 bp | AGTACCTTAATAAGATCATCTTTAAATTCCTTCAGGTaGTCAGGAGAATCAATTATGCCAGTCAGCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: STLIRSSLNSFR*SGESIMPVSTF Trigger: GAATGTGCTGACTGGCATAATTGATTCTCCTGACAACCTGAAGGAATTTAAAGATGATCTTATTAAGGTACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044352.8 |
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