Pregenerated sensors for PCMTD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027589Ensembl transcript IDs: ENSMUST00000029116.14, ENSMUST00000108754.8, ENSMUST00000124346.2, ENSMUST00000139434.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCGCAATACCCTCTGACGAAGGAAGTTCACTGGTGGCTCAGGCTTaGTCTCCTGTAAGGTCCTCTCTGCCACTTCCCGCCGATCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GAIPSDEGSSLVAQA*SPVRSSLPLPADPP Trigger: AGGAGGATCGGCGGGAAGTGGCAGAGAGGACCTTACAGGAGACCAAGCCTGAGCCACCAGTGAACTTCCTTCGTCAGAGGGTATTGCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR CCA 90 bp | TCCTCTCTGCCACTTCCCGCCGATCCTCCTCTGCATCCTCACAGCTaGTGTCATCAGAGGGGTTGGAAATTCGACTGGCAAAAACCTCTT | + |
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Preference number: 1 (lower is better) Translates to: SSLPLPADPPLHPHS*CHQRGWKFDWQKPL Trigger: AAGAGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAGGATGCAGAGGAGGATCGGCGGGAAGTGGCAGAGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR CCA 90 bp | CTTTTCCCTGTAATACAGCAGGTAGTACTTCAGGGGATCAGGCAATaGGAGGCGCAATACCCTCTGACGAAGGAAGTTCACTGGTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: LFPVIQQVVLQGIRQ*EAQYPLTKEVHWWL Trigger: GAGCCACCAGTGAACTTCCTTCGTCAGAGGGTATTGCGCCTCCCATTGCCTGATCCCCTGAAGTACTACCTGCTGTATTACAGGGAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR GCA 90 bp | AAAGGCAAAAGTCAGAGGCCAGCAATAGAACCATCACATGAAATTTaGGTGGTGGTGTGTCACACCTTTACAGACTTGCCCCTTGCCTCA | + |
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Preference number: 1 (lower is better) Translates to: KGKSQRPAIEPSHEI*VVVCHTFTDLPLAS Trigger: TGAGGCAAGGGGCAAGTCTGTAAAGGTGTGACACACCACCACGCAAATTTCATGTGATGGTTCTATTGCTGGCCTCTGACTTTTGCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR TCA 90 bp | GTGAAAGCTTGCCTCTATAAGGAGCAGACATCATGCAGTTCCCAATaGGTTCAAGTTACAGTAGAGCCAAAAAGATGCACATCCCACCCC | + |
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Preference number: 1 (lower is better) Translates to: VKACLYKEQTSCSSQ*VQVTVEPKRCTSHP Trigger: GGGGTGGGATGTGCATCTTTTTGGCTCTACTGTAACTTGAACTCATTGGGAACTGCATGATGTCTGCTCCTTATAGAGGCAAGCTTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR TCA 90 bp | GGTTCCTATAAAGCATCAGAAGGAATCAGGGGAGGATCGACTGCTTaGAAGTCTTTGGAAAATCCTGAAGGATATCTGGCATTTCTATAC | + |
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Preference number: 1 (lower is better) Translates to: GSYKASEGIRGGSTA*KSLENPEGYLAFLY Trigger: GTATAGAAATGCCAGATATCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCGATCCTCCCCTGATTCCTTCTGATGCTTTATAGGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCTCTGCCACTTCCCGCCGATCCTCCTCTGCATCCTCACAGCTGGTGTCATGTCCAAAAAGACAATaGTCTCCATTCTGCGGCGAC | + |
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Preference number: 2 (lower is better) Translates to: VLSATSRRSSSASSQLVSCPKRQ*SPFCGD Trigger: GTCGCCGCAGAATGGAGACCATTGTCTTTTTGGACA...TGACACCAGCTGTGAGGATGCAGAGGAGGATCGGCGGGAAGTGGCAGAGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTAATACAGCAGGTAGTACTTCAGGGGATCAGGCAATGGGAGGCGCAATACCTGCATCCTCACAGCTaGTGTCATCAGAGGGGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PVIQQVVLQGIRQWEAQYLHPHS*CHQRGW Trigger: CCAACCCCTCTGATGACACCAGCTGTGAGGATGCAG...GTATTGCGCCTCCCATTGCCTGATCCCCTGAAGTACTACCTGCTGTATTACAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCTGCATCCTCACAGCTGGTGTCATCAGAGGGGTTGGAAATTCGACTGGCTGTCCAAAAAGACAATaGTCTCCATTCTGCGGCGAC | + |
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Preference number: 2 (lower is better) Translates to: LLCILTAGVIRGVGNSTGCPKRQ*SPFCGD Trigger: GTCGCCGCAGAATGGAGACCATTGTCTTTTTGGACA...GCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAGGATGCAGAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGGATCGACTGCTTGAAAGTCTTTGGAAAATCCTGAAGGATATCTGGCATGTAGAGCCAAAAAGATaGACATCCCACCCCACCCCC | + |
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Preference number: 2 (lower is better) Translates to: GEDRLLESLWKILKDIWHVEPKR*TSHPTP Trigger: GGGGGTGGGGTGGGATGTGCATCTTTTTGGCTCTAC...ATGCCAGATATCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCGATCCTCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCCTGCAAGTCACGTGAGGCTAAACTAAAAGTCAATCATAAGATCTCAGTAAGTGCGGGCGTTCTGTaGCACTGCAGTCTCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: SPCKSREAKLKVNHKISVSAGVL*HCSLST Trigger: GGTGGAGAGACTGCAGTGTCACAGAACGCCCGCACT...TACTGAGATCTTATGATTGACTTTTAGTTTAGCCTCACGTGACTTGCAGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR GCA 90 bp | AAGAGCCAGCTTTTGGAATCAGCAATGCAACTTCAAGTCTTTCCCTCTGACAGCTACAGACTTGCCCCTTaGCTCACACAGGATCCAATC | + |
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Preference number: 2 (lower is better) Translates to: KSQLLESAMQLQVFPSDSYRLAP*LTQDPI Trigger: GATTGGATCCTGTGTGAGGCAAGGGGCAAGTCTGTA...GCTGTCAGAGGGAAAGACTTGAAGTTGCATTGCTGATTCCAAAAGCTGGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGGATCGACTGCTTGAAAGTCTTTGGAAAATCCTGAAGGATATCTGGCATACACCTTTACAGACTTaGCCCTTGCCTCACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: GEDRLLESLWKILKDIWHTPLQT*PLPHTG Trigger: TCCTGTGTGAGGCAAGGGGCAAGTCTGTAAAGGTGT...ATGCCAGATATCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCGATCCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCCTGCAAGTCACGTGAGGCTAAACTAAAAGTCAATCATAAGATCTCAGTAAGGCGCAATACCCTCTaGCGAAGGAAGTTCACTGGT | + |
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Preference number: 2 (lower is better) Translates to: SPCKSREAKLKVNHKISVRRNTL*RRKFTG Trigger: ACCAGTGAACTTCCTTCGTCAGAGGGTATTGCGCCT...TACTGAGATCTTATGATTGACTTTTAGTTTAGCCTCACGTGACTTGCAGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCAGCTTTTGGAATCAGCAATGCAACTTCAAGTCTTTCCCTCTGACAGCCATGAATCACTGCGATaGTTCAGGAAAAACTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: KSQLLESAMQLQVFPSDSHESLR*FRKNFS Trigger: GGAAAAGTTTTTCCTGAACCATCGCAGTGATTCATG...GCTGTCAGAGGGAAAGACTTGAAGTTGCATTGCTGATTCCAAAAGCTGGCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCAGCTTTTGGAATCAGCAATGCAACTTCAAGTCTTTCCCTCTGACAGCAGTTCTCAACACCTATaGCCTGGAGATAACAGATTT | + |
|
Preference number: 2 (lower is better) Translates to: KSQLLESAMQLQVFPSDSSSQHL*PGDNRF Trigger: AAATCTGTTATCTCCAGGCCATAGGTGTTGAGAACT...GCTGTCAGAGGGAAAGACTTGAAGTTGCATTGCTGATTCCAAAAGCTGGCTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAATGTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCTACAGACTTGCCCCTTaGCTCACACAGGATCCAATC | + |
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Preference number: 2 (lower is better) Translates to: QNVGYYCIYHWYILNSGSYRLAP*LTQDPI Trigger: GATTGGATCCTGTGTGAGGCAAGGGGCAAGTCTGTA...GCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCACATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTCTCAGAAAAAGAGATCACTTGATGGTGGTTCCTATAAAGCATCAGAAGCAGGGGAGGATCGACTaGTTGAAAGTCTTTGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: FPLRKRDHLMVVPIKHQKQGRID*LKVFGK Trigger: TTTTCCAAAGACTTTCAAGCAGTCGATCCTCCCCTG...CTTCTGATGCTTTATAGGAACCACCATCAAGTGATCTCTTTTTCTGAGAGGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAATGTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCGAAAAGACATGTACCTaGCCAGCAGTTTCCTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QNVGYYCIYHWYILNSGSEKTCT*PAVSSG Trigger: CCCAGAGGAAACTGCTGGCCAGGTACATGTCTTTTC...GCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCACATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGAATAGAACCATCACATaGAATTTGCGTGGTGGTGTG | + |
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Preference number: 2 (lower is better) Translates to: VGYYCIYHWYILNSGSKVNRTIT*NLRGGV Trigger: CACACCACCACGCAAATTTCATGTGATGGTTCTATT...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGTTTTGGAATCAGCAATaGAACTTCAAGTCTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: VGYYCIYHWYILNSGSKVFWNQQ*NFKSFP Trigger: AGGGAAAGACTTGAAGTTGCATTGCTGATTCCAAAA...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR CCA 72 bp | CCCTCTGACGAAGGAAGTTCACTGGTGGCTCAGGCTTaGTCTCCTGTAAGGTCCTCTCTGCCACTTCCCGCC | + |
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Preference number: 3 (lower is better) Translates to: PSDEGSSLVAQA*SPVRSSLPLPA Trigger: GGCGGGAAGTGGCAGAGAGGACCTTACAGGAGACCAAGCCTGAGCCACCAGTGAACTTCCTTCGTCAGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR TCA 72 bp | TTCAGGGGATCAGGCAATGGGAGGCGCAATACCCTCTaGCGAAGGAAGTTCACTGGTGGCTCAGGCTTGGTC | + |
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Preference number: 3 (lower is better) Translates to: FRGSGNGRRNTL*RRKFTGGSGLV Trigger: GACCAAGCCTGAGCCACCAGTGAACTTCCTTCGTCAGAGGGTATTGCGCCTCCCATTGCCTGATCCCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR CCA 72 bp | CCACTTCCCGCCGATCCTCCTCTGCATCCTCACAGCTaGTGTCATCAGAGGGGTTGGAAATTCGACTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: PLPADPPLHPHS*CHQRGWKFDWQ Trigger: TTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAGGATGCAGAGGAGGATCGGCGGGAAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR CCA 72 bp | AAGGGAAAAGACATGTACCTGGCCAGCAGTTTCCTCTaGGTATCCTGGTCCCACTCTCCCACAGCTCACTTT | + |
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Preference number: 3 (lower is better) Translates to: KGKDMYLASSFL*VSWSHSPTAHF Trigger: AAAGTGAGCTGTGGGAGAGTGGGACCAGGATACCCAGAGGAAACTGCTGGCCAGGTACATGTCTTTTCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
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| 3UTR CCA 72 bp | GTAATACAGCAGGTAGTACTTCAGGGGATCAGGCAATaGGAGGCGCAATACCCTCTGACGAAGGAAGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: VIQQVVLQGIRQ*EAQYPLTKEVH Trigger: GTGAACTTCCTTCGTCAGAGGGTATTGCGCCTCCCATTGCCTGATCCCCTGAAGTACTACCTGCTGTATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR GCA 72 bp | ACCTGGTACTCTAATATGACCAAAGAAGTCAAGAAGTaGGGGCGTTCTGTGACACTGCAGTCTCTCCACCTG | + |
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Preference number: 3 (lower is better) Translates to: TWYSNMTKEVKK*GRSVTLQSLHL Trigger: CAGGTGGAGAGACTGCAGTGTCACAGAACGCCCGCACTTCTTGACTTCTTTGGTCATATTAGAGTACCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR CCA 72 bp | CCTCTGCATCCTCACAGCTGGTGTCATCAGAGGGGTTaGAAATTCGACTGGCAAAAACCTCTTTGTCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: PLHPHSWCHQRG*KFDWQKPLCPK Trigger: TTTTGGACAAAGAGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAGGATGCAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| 3UTR TCA 72 bp | AGGCAAAAGTCAGAGGCCAGCAATAGAACCATCACATaGAATTTGCGTGGTGGTGTGTCACACCTTTACAGA | + |
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Preference number: 3 (lower is better) Translates to: RQKSEASNRTIT*NLRGGVSHLYR Trigger: TCTGTAAAGGTGTGACACACCACCACGCAAATTTCATGTGATGGTTCTATTGCTGGCCTCTGACTTTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR TCA 72 bp | AAAGCATCAGAAGGAATCAGGGGAGGATCGACTGCTTaGAAGTCTTTGGAAAATCCTGAAGGATATCTGGCA | + |
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Preference number: 3 (lower is better) Translates to: KASEGIRGGSTA*KSLENPEGYLA Trigger: TGCCAGATATCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCGATCCTCCCCTGATTCCTTCTGATGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCCTCTCAGAAAAAGAGATCACTTGATGGTGGTTCCTATAAAGCATCAGAAGTTACAGACTTGCCCCTaGCCTCACACAGGATCCAAT | + |
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Preference number: 3 (lower is better) Translates to: FPLRKRDHLMVVPIKHQKLQTCP*PHTGSN Trigger: ATTGGATCCTGTGTGAGGCAAGGGGCAAGTCTGTAA...CTTCTGATGCTTTATAGGAACCACCATCAAGTGATCTCTTTTTCTGAGAGGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAATGTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCCACACCTTTACAGACTaGCCCCTTGCCTCACACAGG | + |
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Preference number: 3 (lower is better) Translates to: QNVGYYCIYHWYILNSGSHTFTD*PLASHR Trigger: CCTGTGTGAGGCAAGGGGCAAGTCTGTAAAGGTGTG...GCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCACATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR TCA 72 bp | GGGAGGATCGACTGCTTGAAAGTCTTTGGAAAATCCTaGAGGATATCTGGCATTTCTATACATTATTCCTCC | + |
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Preference number: 3 (lower is better) Translates to: GRIDCLKVFGKS*RISGISIHYSS Trigger: GGAGGAATAATGTATAGAAATGCCAGATATCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCGATCCTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR TCA 72 bp | CACAGGATCCAATCAAATTTAATTCAAGTCTCAATGTaGAAGCTTGCCTCTATAAGGAGCAGACATCATGCA | + |
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Preference number: 3 (lower is better) Translates to: HRIQSNLIQVSM*KLASIRSRHHA Trigger: TGCATGATGTCTGCTCCTTATAGAGGCAAGCTTTCACATTGAGACTTGAATTAAATTTGATTGGATCCTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR GCA 72 bp | AAGATGGAGAAATCGCAAAACTATCAAATTTCTCCCTaGAAGTCACGTGAGGCTAAACTAAAAGTCAATCAT | + |
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Preference number: 3 (lower is better) Translates to: KMEKSQNYQISP*KSREAKLKVNH Trigger: ATGATTGACTTTTAGTTTAGCCTCACGTGACTTGCAGGGAGAAATTTGATAGTTTTGCGATTTCTCCATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGGCCACTGTCAATATTTaGTTTACAATACAGATCCTG | + |
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Preference number: 3 (lower is better) Translates to: VGYYCIYHWYILNSGSKVATVNI*FTIQIL Trigger: CAGGATCTGTATTGTAAACAAAATATTGACAGTGGC...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR CCA 72 bp | CCCTTTATTTTTAAACTTGATAGTTCTCAACACCTATaGCCTGGAGATAACAGATTTCACATGTCACTAAGT | + |
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Preference number: 3 (lower is better) Translates to: PFIFKLDSSQHL*PGDNRFHMSLS Trigger: ACTTAGTGACATGTGAAATCTGTTATCTCCAGGCCATAGGTGTTGAGAACTATCAAGTTTAAAAATAAAGGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR GCA 90 bp | TCTCCTGTAAGGTCCTCTCTGCCACTTCCCGCCGATCCTCCTCTGCATCCTCACCCAGGTCCTGTAGGCTaGGCACGGCTGGTGGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SPVRSSLPLPADPPLHPHPGPVG*ARLVVV Trigger: TACCACCACCAGCCGTGCGCAGCCTACAGGACCTGG...GTGAGGATGCAGAGGAGGATCGGCGGGAAGTGGCAGAGAGGACCTTACAGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
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| CDS-3UTR CCA 90 bp | TCTCCTGTAAGGTCCTCTCTGCCACTTCCCGCCGATCCTCCTCTGCATCCTCACTCCGAACGGCAAGGCTaGACCAGAGGGGCAAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SPVRSSLPLPADPPLHPHSERQG*TRGAKE Trigger: TTCCTTTGCCCCTCTGGTCCAGCCTTGCCGTTCGGA...GTGAGGATGCAGAGGAGGATCGGCGGGAAGTGGCAGAGAGGACCTTACAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS-3UTR CCA 90 bp | GTCCTCTCTGCCACTTCCCGCCGATCCTCCTCTGCATCCTCACAGCTGGTGTCAGTAGCTGGACAAGTCTaGACTGTCCTGATTCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: VLSATSRRSSSASSQLVSVAGQV*TVLIPN Trigger: GTTCGGAATCAGGACAGTCCAGACTTGTCCAGCTAC...TGACACCAGCTGTGAGGATGCAGAGGAGGATCGGCGGGAAGTGGCAGAGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS-3UTR TCA 90 bp | CCTCACAGCTGGTGTCATCAGAGGGGTTGGAAATTCGACTGGCAAAAACCTCTTGCCCCACCATGGAGCTaGGGTAGCCAGTACCACTGC | + |
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Preference number: 4 (lower is better) Translates to: PHSWCHQRGWKFDWQKPLAPPWS*GSQYHC Trigger: GCAGTGGTACTGGCTACCTCAGCTCCATGGTGGGGC...AAGAGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
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| CDS-3UTR GCA 90 bp | CAGGGGATCAGGCAATGGGAGGCGCAATACCCTCTGACGAAGGAAGTTCACTGGTCACCTCCGAGTAGATaGACGGGGCTGAGAGATGAA | + |
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Preference number: 4 (lower is better) Translates to: QGIRQWEAQYPLTKEVHWSPPSR*TGLRDE Trigger: TTCATCTCTCAGCCCCGTGCATCTACTCGGAGGTGA...CCAGTGAACTTCCTTCGTCAGAGGGTATTGCGCCTCCCATTGCCTGATCCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
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| CDS-3UTR CCA 90 bp | CCCGCCGATCCTCCTCTGCATCCTCACAGCTGGTGTCATCAGAGGGGTTGGAAACTGTGCGTGTTATCTTaGTCAACTTCTCTTCCAAGG | + |
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Preference number: 4 (lower is better) Translates to: PADPPLHPHSWCHQRGWKLCVLS*STSLPR Trigger: CCTTGGAAGAGAAGTTGACCAAGATAACACGCACAG...TTTCCAACCCCTCTGATGACACCAGCTGTGAGGATGCAGAGGAGGATCGGCGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124346.2 |
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| CDS-3UTR GCA 90 bp | GGGGAGGATCGACTGCTTGAAAGTCTTTGGAAAATCCTGAAGGATATCTGGCATCCGCCGATCCTCCTCTaGATCCTCACAGCTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: GEDRLLESLWKILKDIWHPPILL*ILTAGV Trigger: GACACCAGCTGTGAGGATGCAGAGGAGGATCGGCGG...ATGCCAGATATCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCGATCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
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| CDS-3UTR CCA 90 bp | TCACAGCTGGTGTCATCAGAGGGGTTGGAAATTCGACTGGCAAAAACCTCTTTGTCCGAACGGCAAGGCTaGACCAGAGGGGCAAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SQLVSSEGLEIRLAKTSLSERQG*TRGAKE Trigger: TTCCTTTGCCCCTCTGGTCCAGCCTTGCCGTTCGGA...CAAAGAGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS-3UTR CCA 90 bp | GGAACCAAGAAAGGGAAAAGACATGTACCTGGCCAGCAGTTTCCTCTGGGTATCCTGCATCCTCACAGCTaGTGTCATCAGAGGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTKKGKRHVPGQQFPLGILHPHS*CHQRGW Trigger: CCAACCCCTCTGATGACACCAGCTGTGAGGATGCAG...GATACCCAGAGGAAACTGCTGGCCAGGTACATGTCTTTTCCCTTTCTTGGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
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| CDS-3UTR TCA 90 bp | GTAATACAGCAGGTAGTACTTCAGGGGATCAGGCAATGGGAGGCGCAATACCCTTCTCTTCCAAGGGCATaGCAAGGATGCCTCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: VIQQVVLQGIRQWEAQYPSLPRA*QGCLQL Trigger: AAGTTGGAGGCATCCTTGTCATGCCCTTGGAAGAGA...AGGGTATTGCGCCTCCCATTGCCTGATCCCCTGAAGTACTACCTGCTGTATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
||
| CDS-3UTR TCA 90 bp | AACCTCTTTGTCCAAAAAGACAATGGTCTCCATTCTGCGGCGACGGACTCGCCTTCTCTTCCAAGGGCATaGCAAGGATGCCTCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NLFVQKDNGLHSAATDSPSLPRA*QGCLQL Trigger: AAGTTGGAGGCATCCTTGTCATGCCCTTGGAAGAGA...AGGCGAGTCCGTCGCCGCAGAATGGAGACCATTGTCTTTTTGGACAAAGAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS-3UTR CCA 90 bp | AACCTCTTTGTCCAAAAAGACAATGGTCTCCATTCTGCGGCGACGGACTCGCCTGTAGCTGGACAAGTCTaGACTGTCCTGATTCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NLFVQKDNGLHSAATDSPVAGQV*TVLIPN Trigger: GTTCGGAATCAGGACAGTCCAGACTTGTCCAGCTAC...AGGCGAGTCCGTCGCCGCAGAATGGAGACCATTGTCTTTTTGGACAAAGAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCAGCTTTTGGAATCAGCAATGCAACTTCAAGTCTTTCCCTCTGACAGCAAGTCTGGACTGTCCTaGTTCCGAACGGCAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSQLLESAMQLQVFPSDSKSGLS*FRTARL Trigger: CAGCCTTGCCGTTCGGAATCAGGACAGTCCAGACTT...GCTGTCAGAGGGAAAGACTTGAAGTTGCATTGCTGATTCCAAAAGCTGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCTCAGAAAAAGAGATCACTTGATGGTGGTTCCTATAAAGCATCAGAAGGCCCCACCATGGAGCTaGGGTAGCCAGTACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPLRKRDHLMVVPIKHQKAPPWS*GSQYHC Trigger: GCAGTGGTACTGGCTACCTCAGCTCCATGGTGGGGC...CTTCTGATGCTTTATAGGAACCACCATCAAGTGATCTCTTTTTCTGAGAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR TCA 90 bp | CTCACTTTTCCCTGTAATACAGCAGGTAGTACTTCAGGGGATCAGGCAATGGGAGCTTCGCGTACTCAGTaGCATCTGAATGAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTFPCNTAGSTSGDQAMGASRTQ*HLNEAP Trigger: TGGAGCTTCATTCAGATGTCACTGAGTACGCGAAGC...TCCCATTGCCTGATCCCCTGAAGTACTACCTGCTGTATTACAGGGAAAAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
||
| CDS-3UTR TCA 90 bp | GGTGTCATCAGAGGGGTTGGAAATTCGACTGGCAAAAACCTCTTTGTCCAAAAAAAGTCTGGACTGTCCTaGTTCCGAACGGCAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVIRGVGNSTGKNLFVQKKSGLS*FRTARL Trigger: CAGCCTTGCCGTTCGGAATCAGGACAGTCCAGACTT...TTTTTGGACAAAGAGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACC 49% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
||
| CDS-3UTR TCA 90 bp | GGGTTGGAAATTCGACTGGCAAAAACCTCTTTGTCCAAAAAGACAATGGTCTCCAAGTCTGGACTGTCCTaGTTCCGAACGGCAAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLEIRLAKTSLSKKTMVSKSGLS*FRTARL Trigger: CAGCCTTGCCGTTCGGAATCAGGACAGTCCAGACTT...GGAGACCATTGTCTTTTTGGACAAAGAGGTTTTTGCCAGTCGAATTTCCAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
||
| CDS-3UTR TCA 90 bp | ACCTGGTACTCTAATATGACCAAAGAAGTCAAGAAGTGCGGGCGTTCTGTGACAAGGCGCAATACCCTCTaGCGAAGGAAGTTCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWYSNMTKEVKKCGRSVTRRNTL*RRKFTG Trigger: ACCAGTGAACTTCCTTCGTCAGAGGGTATTGCGCCT...TGTCACAGAACGCCCGCACTTCTTGACTTCTTTGGTCATATTAGAGTACCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCAGCTTTTGGAATCAGCAATGCAACTTCAAGTCTTTCCCTCTGACAGCTCACCTCCGAGTAGATaGACGGGGCTGAGAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSQLLESAMQLQVFPSDSSPPSR*TGLRDE Trigger: TTCATCTCTCAGCCCCGTGCATCTACTCGGAGGTGA...GCTGTCAGAGGGAAAGACTTGAAGTTGCATTGCTGATTCCAAAAGCTGGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCTCTGCATCCTCACAGCTGGTGTCATCAGAGGGGTTGGAAATTCGACTGGATACTGACAACAATCTaGAGCAATCTCCAGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: PPLHPHSWCHQRGWKFDWILTTI*SNLQAI Trigger: AATTGCCTGGAGATTGCTCCAGATTGTTGTCAGTAT...CCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAGGATGCAGAGGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
||
| CDS-3UTR TCA 90 bp | CTCACTTTTCCCTGTAATACAGCAGGTAGTACTTCAGGGGATCAGGCAATGGGAGTAGATGCACGGGGCTaGGAGATGAATATTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTFPCNTAGSTSGDQAMGVDARG*EMNISM Trigger: CATGGAAATATTCATCTCTCAGCCCCGTGCATCTAC...TCCCATTGCCTGATCCCCTGAAGTACTACCTGCTGTATTACAGGGAAAAGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
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| CDS-3UTR TCA 90 bp | TCAAGTCTCAATGTGAAAGCTTGCCTCTATAAGGAGCAGACATCATGCAGTTCCGTACTCAGTGACATCTaGATGAAGCTCCACCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLNVKACLYKEQTSCSSVLSDI*MKLHPV Trigger: CACGGGGTGGAGCTTCATTCAGATGTCACTGAGTAC...GGAACTGCATGATGTCTGCTCCTTATAGAGGCAAGCTTTCACATTGAGACTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
||
| CDS-3UTR TCA 90 bp | GGGGAGGATCGACTGCTTGAAAGTCTTTGGAAAATCCTGAAGGATATCTGGCATGCTTCGCGTACTCAGTaGCATCTGAATGAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEDRLLESLWKILKDIWHASRTQ*HLNEAP Trigger: TGGAGCTTCATTCAGATGTCACTGAGTACGCGAAGC...ATGCCAGATATCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCGATCCTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR CCA 90 bp | TCTCCCTGCAAGTCACGTGAGGCTAAACTAAAAGTCAATCATAAGATCTCAGTATCCGAACGGCAAGGCTaGACCAGAGGGGCAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPCKSREAKLKVNHKISVSERQG*TRGAKE Trigger: TTCCTTTGCCCCTCTGGTCCAGCCTTGCCGTTCGGA...TACTGAGATCTTATGATTGACTTTTAGTTTAGCCTCACGTGACTTGCAGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
||
| CDS-3UTR GCA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGCCAGGTCCTGTAGGCTaGGCACGGCTGGTGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VGYYCIYHWYILNSGSKVPGPVG*ARLVVV Trigger: TACCACCACCAGCCGTGCGCAGCCTACAGGACCTGG...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR TCA 90 bp | ATCCTCACAGCTGGTGTCATCAGAGGGGTTGGAAATTCGACTGGCAAAAACCTCGGATGCCTCCAACTTTaGGAAGATTTTTCATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ILTAGVIRGVGNSTGKNLGCLQL*EDFSCT Trigger: AGTACATGAAAAATCTTCTCAAAGTTGGAGGCATCC...GAGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
||
| CDS-3UTR GCA 90 bp | GGGGAGGATCGACTGCTTGAAAGTCTTTGGAAAATCCTGAAGGATATCTGGCATAAGCAGAAGGACCTGTaGGTGTTATCTTGGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GEDRLLESLWKILKDIWHKQKDL*VLSWST Trigger: AGTTGACCAAGATAACACGCACAGGTCCTTCTGCTT...ATGCCAGATATCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCGATCCTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| 3UTR CAA 72 bp | GAAATTTGCGTGGTGGTGTGTCACACCTTTACAGACTaGCCCCTTGCCTCACACAGGATCCAATCAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: EICVVVCHTFTD*PLASHRIQSNL Trigger: TAAATTTGATTGGATCCTGTGTGAGGCAAGGGGCAAGTCTGTAAAGGTGTGACACACCACCACGCAAATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGCAAAAACCTCTTTGTCCAAAAAGACAATGGTCTCCATTCTGCGGCGACGATACTGACAACAATCTaGAGCAATCTCCAGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: TGKNLFVQKDNGLHSAATILTTI*SNLQAI Trigger: AATTGCCTGGAGATTGCTCCAGATTGTTGTCAGTAT...CGTCGCCGCAGAATGGAGACCATTGTCTTTTTGGACAAAGAGGTTTTTGCCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTCTCAATGTGAAAGCTTGCCTCTATAAGGAGCAGACATCATGCAGTTCCGGTAGCCAGTACCACTaGCCAAATTCAGAAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLNVKACLYKEQTSCSSGSQYH*PNSEMK Trigger: TTTCATTTCTGAATTTGGGCAGTGGTACTGGCTACC...GGAACTGCATGATGTCTGCTCCTTATAGAGGCAAGCTTTCACATTGAGACTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR CCA 90 bp | TCAAGTCTCAATGTGAAAGCTTGCCTCTATAAGGAGCAGACATCATGCAGTTCCATACTGACAACAATCTaGAGCAATCTCCAGGCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSLNVKACLYKEQTSCSSILTTI*SNLQAI Trigger: AATTGCCTGGAGATTGCTCCAGATTGTTGTCAGTAT...GGAACTGCATGATGTCTGCTCCTTATAGAGGCAAGCTTTCACATTGAGACTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR CCA 90 bp | TTTCCTCTCAGAAAAAGAGATCACTTGATGGTGGTTCCTATAAAGCATCAGAAGTGTCCAAAAAGACAATaGTCTCCATTCTGCGGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: FPLRKRDHLMVVPIKHQKCPKRQ*SPFCGD Trigger: GTCGCCGCAGAATGGAGACCATTGTCTTTTTGGACA...CTTCTGATGCTTTATAGGAACCACCATCAAGTGATCTCTTTTTCTGAGAGGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
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| CDS-3UTR CCA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGAAGGAAGTTCACTGGTaGCTCAGGCTTGGTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGYYCIYHWYILNSGSKVKEVHW*LRLGLL Trigger: CAGGAGACCAAGCCTGAGCCACCAGTGAACTTCCTT...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
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| CDS-3UTR TCA 90 bp | CAGAATGTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCTCTCTTCCAAGGGCATaGCAAGGATGCCTCCAACTT | + |
|
Preference number: 4 (lower is better) Translates to: QNVGYYCIYHWYILNSGSSLPRA*QGCLQL Trigger: AAGTTGGAGGCATCCTTGTCATGCCCTTGGAAGAGA...GCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCACATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR CCA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGGTAGCTGGACAAGTCTaGACTGTCCTGATTCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGYYCIYHWYILNSGSKVVAGQV*TVLIPN Trigger: GTTCGGAATCAGGACAGTCCAGACTTGTCCAGCTAC...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR TCA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGGTAGATGCACGGGGCTaGGAGATGAATATTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VGYYCIYHWYILNSGSKVVDARG*EMNISM Trigger: CATGGAAATATTCATCTCTCAGCCCCGTGCATCTAC...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR TCA 90 bp | TCTCCCTGCAAGTCACGTGAGGCTAAACTAAAAGTCAATCATAAGATCTCAGTAGGATGCCTCCAACTTTaGGAAGATTTTTCATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SPCKSREAKLKVNHKISVGCLQL*EDFSCT Trigger: AGTACATGAAAAATCTTCTCAAAGTTGGAGGCATCC...TACTGAGATCTTATGATTGACTTTTAGTTTAGCCTCACGTGACTTGCAGGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR CCA 90 bp | TTTCCTCTCAGAAAAAGAGATCACTTGATGGTGGTTCCTATAAAGCATCAGAAGTGTCATCAGAGGGGTTaGAAATTCGACTGGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FPLRKRDHLMVVPIKHQKCHQRG*KFDWQK Trigger: TTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACA...CTTCTGATGCTTTATAGGAACCACCATCAAGTGATCTCTTTTTCTGAGAGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
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| CDS-3UTR CCA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGCTGTGCGTGTTATCTTaGTCAACTTCTCTTCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VGYYCIYHWYILNSGSKVLCVLS*STSLPR Trigger: CCTTGGAAGAGAAGTTGACCAAGATAACACGCACAG...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
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| CDS-3UTR GCA 90 bp | CAGAATGTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCGGTAGCCAGTACCACTaGCCAAATTCAGAAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNVGYYCIYHWYILNSGSGSQYH*PNSEMK Trigger: TTTCATTTCTGAATTTGGGCAGTGGTACTGGCTACC...GCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCACATTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGGGATGCCTCCAACTTTaGGAAGATTTTTCATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: VGYYCIYHWYILNSGSKVGCLQL*EDFSCT Trigger: AGTACATGAAAAATCTTCTCAAAGTTGGAGGCATCC...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
||
| CDS CCA 90 bp | GGTCCTGTAGGCTGCGCACGGCTGGTGGTGGTAGCTGGACAAGTCTaGACTGTCCTGATTCCGAACGGCAAGGCTGGACCAGAGGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GPVGCARLVVVAGQV*TVLIPNGKAGPEGQ Trigger: TTGCCCCTCTGGTCCAGCCTTGCCGTTCGGAATCAGGACAGTCCAGACTTGTCCAGCTACCACCACCAGCCGTGCGCAGCCTACAGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTCTCTGCCACTTCCCGCCGATCCTCCTCTGCATCCTCACAGCTGGTGTCACAGCCAGAATCTTTTTaGTCTCCCAAGCAGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VLSATSRRSSSASSQLVSQPESF*SPKQKD Trigger: GTCCTTCTGCTTGGGAGACAAAAAAGATTCTGGCTG...TGACACCAGCTGTGAGGATGCAGAGGAGGATCGGCGGGAAGTGGCAGAGAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS-3UTR CAA 90 bp | CCCGCCGATCCTCCTCTGCATCCTCACAGCTGGTGTCATCAGAGGGGTTGGAAACAGCCAGAATCTTTTTaGTCTCCCAAGCAGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PADPPLHPHSWCHQRGWKQPESF*SPKQKD Trigger: GTCCTTCTGCTTGGGAGACAAAAAAGATTCTGGCTG...TTTCCAACCCCTCTGATGACACCAGCTGTGAGGATGCAGAGGAGGATCGGCGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
||
| CDS GCA 90 bp | AAAGCCCAGGCTGCAGATCCAGAGCCTCCATCACCTCCGAGTAGATaGACGGGGCTGAGAGATGAATATTTCCATGTTTCCATGCCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KAQAADPEPPSPPSR*TGLRDEYFHVSMPS Trigger: ACTTGGCATGGAAACATGGAAATATTCATCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAGGCTCTGGATCTGCAGCCTGGGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000139434.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGGCAATGGGAGGCGCAATACCCTCTGACGAAGGAAGTTCACTGGTGGCTCCCTGTGCGTGTTATCTaGGTCAACTTCTCTTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IRQWEAQYPLTKEVHWWLPVRVI*VNFSSK Trigger: CTTGGAAGAGAAGTTGACCAAGATAACACGCACAGG...GAGCCACCAGTGAACTTCCTTCGTCAGAGGGTATTGCGCCTCCCATTGCCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124346.2 |
||
| CDS TCA 90 bp | ATGAAGACATCCAGTTTCTGCTTCGCGTACTCAGTGACATCTGAATaGAGCTCCACCCCGTGGTTCACGCCGAAAGGACCTAGAATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MKTSSFCFAYSVTSE*SSTPWFTPKGPRMS Trigger: GCTCATTCTAGGTCCTTTCGGCGTGAACCACGGGGTGGAGCTTCATTCAGATGTCACTGAGTACGCGAAGCAGAAACTGGATGTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000139434.2 |
||
| CDS CCA 90 bp | TCAATAGCGCGGAAAGCCTGCTCTACTAAGTCCGTCCGGATGTACTaGGCTTCCTTCAAGTTATCAATGAGCTCATCGTTGTCCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SIARKACSTKSVRMY*ASFKLSMSSSLSSP Trigger: TGGGGAGGACAACGATGAGCTCATTGATAACTTGAAGGAAGCCCAGTACATCCGGACGGACTTAGTAGAGCAGGCTTTCCGCGCTATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000139434.2 |
||
| CDS-3UTR CAA 90 bp | CTCACAGCTGGTGTCATCAGAGGGGTTGGAAATTCGACTGGCAAAAACCTCTTTTCAATGAGCTCATCGTaGTCCTCCCCAGCACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LTAGVIRGVGNSTGKNLFSMSSS*SSPALT Trigger: TGTGAGTGCTGGGGAGGACAACGATGAGCTCATTGA...AAAGAGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
||
| CDS-3UTR CAA 90 bp | GGGGAGGATCGACTGCTTGAAAGTCTTTGGAAAATCCTGAAGGATATCTGGCATTCAATGAGCTCATCGTaGTCCTCCCCAGCACTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GEDRLLESLWKILKDIWHSMSSS*SSPALT Trigger: TGTGAGTGCTGGGGAGGACAACGATGAGCTCATTGA...ATGCCAGATATCCTTCAGGATTTTCCAAAGACTTTCAAGCAGTCGATCCTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
||
| CDS-3UTR CAA 90 bp | GATCAGGCAATGGGAGGCGCAATACCCTCTGACGAAGGAAGTTCACTGGTGGCTAGGATGCCTCCAACTTaGAGAAGATTTTTCATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DQAMGGAIPSDEGSSLVARMPPT*RRFFMY Trigger: GTACATGAAAAATCTTCTCAAAGTTGGAGGCATCCT...AGCCACCAGTGAACTTCCTTCGTCAGAGGGTATTGCGCCTCCCATTGCCTGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
||
| CDS-3UTR CAA 90 bp | TCTCCCTGCAAGTCACGTGAGGCTAAACTAAAAGTCAATCATAAGATCTCAGTAACTGGTGGCTCAGGCTaGGTCTCCTGTAAGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPCKSREAKLKVNHKISVTGGSG*VSCKVL Trigger: GAGGACCTTACAGGAGACCAAGCCTGAGCCACCAGT...TACTGAGATCTTATGATTGACTTTTAGTTTAGCCTCACGTGACTTGCAGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
||
| CDS-3UTR CAA 90 bp | GGAACCAAGAAAGGGAAAAGACATGTACCTGGCCAGCAGTTTCCTCTGGGTATCCCTGTGCGTGTTATCTaGGTCAACTATCTTCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: GTKKGKRHVPGQQFPLGIPVRVI*VNYLLF Trigger: GAAGAGAAGATAGTTGACCAAGATAACACGCACAGG...GATACCCAGAGGAAACTGCTGGCCAGGTACATGTCTTTTCCCTTTCTTGGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
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| CDS-3UTR CAA 90 bp | GGAACCAAGAAAGGGAAAAGACATGTACCTGGCCAGCAGTTTCCTCTGGGTATCTCACAGAAGTCAAATTaGTCAAAGCTGTCGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: GTKKGKRHVPGQQFPLGISQKSN*SKLSLV Trigger: AACCAGCGACAGCTTTGACAAATTTGACTTCTGTGA...GATACCCAGAGGAAACTGCTGGCCAGGTACATGTCTTTTCCCTTTCTTGGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR CAA 90 bp | CTCACAGCTGGTGTCATCAGAGGGGTTGGAAATTCGACTGGCAAAAACCTCTTTTCACAGAAGTCAAATTaGTCAAAGCTGTCGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: LTAGVIRGVGNSTGKNLFSQKSN*SKLSLV Trigger: AACCAGCGACAGCTTTGACAAATTTGACTTCTGTGA...AAAGAGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS-3UTR CAA 90 bp | GGAACCAAGAAAGGGAAAAGACATGTACCTGGCCAGCAGTTTCCTCTGGGTATCAGGATGCCTCCAACTTaGAGAAGATTTTTCATGTAC | + |
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Preference number: 5 (lower is better) Translates to: GTKKGKRHVPGQQFPLGIRMPPT*RRFFMY Trigger: GTACATGAAAAATCTTCTCAAAGTTGGAGGCATCCT...GATACCCAGAGGAAACTGCTGGCCAGGTACATGTCTTTTCCCTTTCTTGGTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR CAA 90 bp | CATCCTCACAGCTGGTGTCATCAGAGGGGTTGGAAATTCGACTGGCAAAAACCTAGGATGCCTCCAACTTaGAGAAGATTTTTCATGTAC | + |
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Preference number: 5 (lower is better) Translates to: HPHSWCHQRGWKFDWQKPRMPPT*RRFFMY Trigger: GTACATGAAAAATCTTCTCAAAGTTGGAGGCATCCT...AGGTTTTTGCCAGTCGAATTTCCAACCCCTCTGATGACACCAGCTGTGAGGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTCTCAATGTGAAAGCTTGCCTCTATAAGGAGCAGACATCATGCAGTTCCCAGCCAGAATCTTTTTaGTCTCCCAAGCAGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SSLNVKACLYKEQTSCSSQPESF*SPKQKD Trigger: GTCCTTCTGCTTGGGAGACAAAAAAGATTCTGGCTG...GGAACTGCATGATGTCTGCTCCTTATAGAGGCAAGCTTTCACATTGAGACTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS-3UTR CAA 90 bp | GTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCAAAGTGCCTGTGCGTGTTATCTaGGTCAACTTCTCTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: VGYYCIYHWYILNSGSKVPVRVI*VNFSSK Trigger: CTTGGAAGAGAAGTTGACCAAGATAACACGCACAGG...CACTTTGCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
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| CDS-3UTR CAA 90 bp | CAGAATGTGGGATATTATTGTATATACCATTGGTATATACTGAATTCTGGCAGCTCACAGAAGTCAAATTaGTCAAAGCTGTCGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: QNVGYYCIYHWYILNSGSSQKSN*SKLSLV Trigger: AACCAGCGACAGCTTTGACAAATTTGACTTCTGTGA...GCTGCCAGAATTCAGTATATACCAATGGTATATACAATAATATCCCACATTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS CCA 72 bp | GGCTGCGCACGGCTGGTGGTGGTAGCTGGACAAGTCTaGACTGTCCTGATTCCGAACGGCAAGGCTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: GCARLVVVAGQV*TVLIPNGKAGP Trigger: TGGTCCAGCCTTGCCGTTCGGAATCAGGACAGTCCAGACTTGTCCAGCTACCACCACCAGCCGTGCGCAGCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 |
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| CDS CCA 72 bp | GCGCACGGCTGGTGGTGTCACGTAGCTGGACAAGTCTaGACTGTCCTGATTCCGAACGGCAAGGCTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: AHGWWCHVAGQV*TVLIPNGKAGP Trigger: TGGTCCAGCCTTGCCGTTCGGAATCAGGACAGTCCAGACTTGTCCAGCTACGTGACACCACCAGCCGTGCGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124346.2 |
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| CDS TCA 72 bp | TCCAGTTTCTGCTTCGCGTACTCAGTGACATCTGAATaGAGCTCCACCCCGTGGTTCACGCCGAAAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: SSFCFAYSVTSE*SSTPWFTPKGP Trigger: AGGTCCTTTCGGCGTGAACCACGGGGTGGAGCTTCATTCAGATGTCACTGAGTACGCGAAGCAGAAACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000139434.2 |
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| CDS TCA 72 bp | GACATCCAGTTTCTGCTTCGCGTACTCAGTGACATCTaGATGAAGCTCCACCCCGTGGTTCACGCCGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: DIQFLLRVLSDI*MKLHPVVHAER Trigger: CCTTTCGGCGTGAACCACGGGGTGGAGCTTCATTCAGATGTCACTGAGTACGCGAAGCAGAAACTGGATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000139434.2 |
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| CDS GCA 72 bp | GCTGCAGATCCAGAGCCTCCATCACCTCCGAGTAGATaGACGGGGCTGAGAGATGAATATTTCCATGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: AADPEPPSPPSR*TGLRDEYFHVS Trigger: GGAAACATGGAAATATTCATCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAGGCTCTGGATCTGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000139434.2 |
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| CDS CAA 90 bp | GGCAAGGCTGGACCAGAGGGGCAAAGGAAACAGCCAGAATCTTTTTaGTCTCCCAAGCAGAAGGACCTGTGCGTGTTATCTTGGTCAACT | + |
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Preference number: 6 (lower is better) Translates to: GKAGPEGQRKQPESF*SPKQKDLCVLSWST Trigger: AGTTGACCAAGATAACACGCACAGGTCCTTCTGCTTGGGAGACAAAAAAGATTCTGGCTGTTTCCTTTGCCCCTCTGGTCCAGCCTTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS TCA 72 bp | CAGAGCCTCCATCACCTCCGAGTAGATGCACGGGGCTaGGAGATGAATATTTCCATGTTTCCATGCCAAGTC | + |
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Preference number: 6 (lower is better) Translates to: QSLHHLRVDARG*EMNISMFPCQV Trigger: GACTTGGCATGGAAACATGGAAATATTCATCTCTCAGCCCCGTGCATCTACTCGGAGGTGATGGAGGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000139434.2 |
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| CDS CCA 72 bp | CGGAAAGCCTGCTCTACTAAGTCCGTCCGGATGTACTaGGCTTCCTTCAAGTTATCAATGAGCTCATCGTTG | + |
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Preference number: 6 (lower is better) Translates to: RKACSTKSVRMY*ASFKLSMSSSL Trigger: CAACGATGAGCTCATTGATAACTTGAAGGAAGCCCAGTACATCCGGACGGACTTAGTAGAGCAGGCTTTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000139434.2 |
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| CDS CAA 72 bp | GGACCAGAGGGGCAAAGGAAACAGCCAGAATCTTTTTaGTCTCCCAAGCAGAAGGACCTGTGCGTGTTATCT | + |
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Preference number: 6 (lower is better) Translates to: GPEGQRKQPESF*SPKQKDLCVLS Trigger: AGATAACACGCACAGGTCCTTCTGCTTGGGAGACAAAAAAGATTCTGGCTGTTTCCTTTGCCCCTCTGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000124346.2 |
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| CDS CCA 72 bp | TTCGACTGGCAAAAACCTCTTTGTCCAAAAAGACAATaGTCTCCATTCTGCGGCGACGGACTCGCCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FDWQKPLCPKRQ*SPFCGDGLAFF Trigger: AAAGAAGGCGAGTCCGTCGCCGCAGAATGGAGACCATTGTCTTTTTGGACAAAGAGGTTTTTGCCAGTCGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029116.14 |
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| CDS CCA 72 bp | TTGTCTCCCAAGCAGAAGGACCTGTGCGTGTTATCTTaGTCAACTATCTTCTCTTCCAAGGGCATGACAAGG | + |
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Preference number: 6 (lower is better) Translates to: LSPKQKDLCVLS*STIFSSKGMTR Trigger: CCTTGTCATGCCCTTGGAAGAGAAGATAGTTGACCAAGATAACACGCACAGGTCCTTCTGCTTGGGAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
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| CDS CAA 72 bp | TTTGTCTCCCAAGCAGAAGGACCTGTGCGTGTTATCTaGGTCAACTATCTTCTCTTCCAAGGGCATGACAAG | + |
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Preference number: 6 (lower is better) Translates to: FVSQAEGPVRVI*VNYLLFQGHDK Trigger: CTTGTCATGCCCTTGGAAGAGAAGATAGTTGACCAAGATAACACGCACAGGTCCTTCTGCTTGGGAGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108754.8 |
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| CDS CAA 72 bp | TTTCCAGTTACAAAGGAAGGTTCACAGAAGTCAAATTaGTCAAAGCTGTCGCTGGTTCTGATGAAGACATCC | + |
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Preference number: 6 (lower is better) Translates to: FPVTKEGSQKSN*SKLSLVLMKTS Trigger: GGATGTCTTCATCAGAACCAGCGACAGCTTTGACAAATTTGACTTCTGTGAACCTTCCTTTGTAACTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029116.14 ENSMUST00000108754.8 ENSMUST00000124346.2 ENSMUST00000139434.2 |
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