Pregenerated sensors for PCMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019795Ensembl transcript IDs: ENSMUST00000159917.8, ENSMUST00000161123.8, ENSMUST00000161428.8, ENSMUST00000162606.8, ENSMUST00000162682.8, ENSMUST00000163085.8
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACACATATTTCAAATGACCATGCATCCTGGACTCCAGGGGGTCACTaGCAGGATTCCAAAGCAACAACCAGCAGCAAACCAAAGCTGGTT | + |
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Preference number: 1 (lower is better) Translates to: THISNDHASWTPGGH*QDSKATTSSKPKLV Trigger: AACCAGCTTTGGTTTGCTGCTGGTTGTTGCTTTGGAATCCTGTCAGTGACCCCCTGGAGTCCAGGATGCATGGTCATTTGAAATATGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR GCA 90 bp | ATGAGAGGTTTCATTTTGACACTGCCATCTTGTAGCTTGTCATACTaGTCCAACATTTGGTTTCCTCCTGCAGGACCGACTGGCAATATC | + |
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Preference number: 1 (lower is better) Translates to: MRGFILTLPSCSLSY*SNIWFPPAGPTGNI Trigger: GATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTATGACAAGCTACAAGATGGCAGTGTCAAAATGAAACCTCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161123.8 ENSMUST00000161428.8 |
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| 3UTR CCA 90 bp | ATTTTGACACTGCCATCTTGTAGCTTGTCATACTGCTCCAACATTTaGTTTCCTCCTGCAGGACCGACTGGCAATATCAATCTTCCACCA | + |
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Preference number: 1 (lower is better) Translates to: ILTLPSCSLSYCSNI*FPPAGPTGNINLPP Trigger: TGGTGGAAGATTGATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTATGACAAGCTACAAGATGGCAGTGTCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161123.8 ENSMUST00000161428.8 |
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| 3UTR TCA 90 bp | TCTCAACCACATTCTTCCTCATACTACATTCACCCAGTCACTCATTaGGCATTTACTACAGAGCTATTAAAAAGCAAGCCTTGGGCTAGG | + |
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Preference number: 1 (lower is better) Translates to: SQPHSSSYYIHPVTH*AFTTELLKSKPWAR Trigger: CCTAGCCCAAGGCTTGCTTTTTAATAGCTCTGTAGTAAATGCTCAATGAGTGACTGGGTGAATGTAGTATGAGGAAGAATGTGGTTGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR GCA 90 bp | TCAAAATTTCCAATCGGAACAGCTGAGTGTTTTTGGGACACCACCTaGCATCATCGTCGTCTCAAGTTTCAGTATTTACAAACACCTAGT | + |
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Preference number: 1 (lower is better) Translates to: SKFPIGTAECFWDTT*HHRRLKFQYLQTPS Trigger: ACTAGGTGTTTGTAAATACTGAAACTTGAGACGACGATGATGGCAGGTGGTGTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR CCA 90 bp | AGGAAATTTACATCAAAATTTCCAATCGGAACAGCTGAGTGTTTTTaGGACACCACCTGCCATCATCGTCGTCTCAAGTTTCAGTATTTA | + |
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Preference number: 1 (lower is better) Translates to: RKFTSKFPIGTAECF*DTTCHHRRLKFQYL Trigger: TAAATACTGAAACTTGAGACGACGATGATGGCAGGTGGTGTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGATGTAAATTTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR GCA 90 bp | TACGACGCTTCCCCAGGACTGTGGGCAGCATCTGGACCTAGCAGACCTGTGTCCTGCCTGGAAACCTGCTaGTCTGCCTCTGAAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: YDASPGLWAASGPSRPVSCLETC*SASEAV Trigger: AACTGCTTCAGAGGCAGAGCAGCAGGTTTCCAGGCA...GGACACAGGTCTGCTAGGTCCAGATGCTGCCCACAGTCCTGGGGAAGCGTCGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGAGCAGGTGCCTTCGGGGTTCAGAAGATCCCCAGGGCCTTCTTGCTGACCTTCAAAAGAAGACATaGCAGCTGGCCGACAGAATC | + |
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Preference number: 2 (lower is better) Translates to: GGSRCLRGSEDPQGLLADLQKKT*QLADRI Trigger: GATTCTGTCGGCCAGCTGCCATGTCTTCTTTTGAAG...GTCAGCAAGAAGGCCCTGGGGATCTTCTGAACCCCGAAGGCACCTGCTCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCTTTAACTGGTCTATTAATGCCTGGGGCACAACTGGGGCTGCAGCTCCCAGGGGCACTGATTGTTaGCTGGAAACCTGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PGFNWSINAWGTTGAAAPRGTDC*LETCCS Trigger: AGAGCAGCAGGTTTCCAGGCAACAATCAGTGCCCCT...GGGAGCTGCAGCCCCAGTTGTGCCCCAGGCATTAATAGACCAGTTAAAGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTTTTCAAGTCTGCGGGACCACAGTAATGCTAGTTTCCTGGGACTGAGACCTGGGCACAACTGGGGCTaGAGCTCCCACATGAATAGC | + |
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Preference number: 2 (lower is better) Translates to: RFSSLRDHSNASFLGLRPGHNWG*SSHMNS Trigger: GCTATTCATGTGGGAGCTGCAGCCCCAGTTGTGCCC...AGGTCTCAGTCCCAGGAAACTAGCATTACTGTGGTCCCGCAGACTTGAAAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR GCA 90 bp | CATAAGACTACGACGCTTCCCCAGGACTGTGGGCAGCATCTGGACCTAGCAGACCATTTGGTTTCCTCCTaGAGGACCGACTGGCAATAT | + |
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Preference number: 2 (lower is better) Translates to: HKTTTLPQDCGQHLDLADHLVSS*RTDWQY Trigger: ATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATG...GTCTGCTAGGTCCAGATGCTGCCCACAGTCCTGGGGAAGCGTCGTAGTCTTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGGCAGAGAGAAACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCTGCCTGGGGCACAACTaGGGCTGCAGCTCCCACATG | + |
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Preference number: 2 (lower is better) Translates to: RKAERNNEHRVSILKKCSCLGHN*GCSSHM Trigger: CATGTGGGAGCTGCAGCCCCAGTTGTGCCCCAGGCA...GCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTTTCTCTCTGCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR TCA 90 bp | TACCTCCTAGAATATCATAAGACTACGACGCTTCCCCAGGACTGTGGGCAGCATGTGCAAAACAGGCGGTaGGGATTCCACTTCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: YLLEYHKTTTLPQDCGQHVQNRR*GFHFQS Trigger: GCTCTGGAAGTGGAATCCTCACCGCCTGTTTTGCAC...ATGCTGCCCACAGTCCTGGGGAAGCGTCGTAGTCTTATGATATTCTAGGAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR GCA 90 bp | AGTCTGCGGGACCACAGTAATGCTAGTTTCCTGGGACTGAGACCTAAGCCAAGATTGGCAAAGCAGCGCTaGATAAACTGTGCAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: SLRDHSNASFLGLRPKPRLAKQR*INCAKT Trigger: TGTCTTTGCACAGTTTATGCAGCGCTGCTTTGCCAA...TCTTGGCTTAGGTCTCAGTCCCAGGAAACTAGCATTACTGTGGTCCCGCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR CCA 90 bp | TTTAAAGTGAAATGTGGGCATGTTAAAACAACACACGCAGTTAACGCTCTGCAGGTTTTCACTGAGCGGTaGGAGCAGGTGCCTTCGGGG | + |
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Preference number: 2 (lower is better) Translates to: FKVKCGHVKTTHAVNALQVFTER*EQVPSG Trigger: CCCCGAAGGCACCTGCTCCCACCGCTCAGTGAAAAC...CTGCAGAGCGTTAACTGCGTGTGTTGTTTTAACATGCCCACATTTCACTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGGCAGAGAGAAACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCGCACTGATTGTTGCCTaGAAACCTGCTGCTCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RKAERNNEHRVSILKKCSALIVA*KPAALP Trigger: AGGCAGAGCAGCAGGTTTCCAGGCAACAATCAGTGC...GCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTTTCTCTCTGCCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGCAAAGCAGCGCTGCATAAACTGTGCAAAGACACGACCGCTTACACAGAATACTGCTCCAACATTTaGTTTCCTCCTGCAGGACCG | + |
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Preference number: 2 (lower is better) Translates to: FGKAALHKLCKDTTAYTEYCSNI*FPPAGP Trigger: CGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTA...TTCTGTGTAAGCGGTCGTGTCTTTGCACAGTTTATGCAGCGCTGCTTTGCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR CAA 90 bp | AAAACAACACACGCAGTTAACGCTCTGCAGCCTTCCTCTATCAGTTaGGCTCCGCGCCGTTTGGAATTAGGAAATCCTACAAAACCACAC | + |
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Preference number: 2 (lower is better) Translates to: KTTHAVNALQPSSIS*APRRLELGNPTKPH Trigger: GTGTGGTTTTGTAGGATTTCCTAATTCCAAACGGCGCGGAGCCAAACTGATAGAGGAAGGCTGCAGAGCGTTAACTGCGTGTGTTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR CAA 90 bp | AGATGTGAAGAGTGGGGATGGGCTTCTCAGACACTAAGAGTCTTCTaGTCAGAATCATGTGCCCTTACACATAGAGGGAAGGCTTCGCTT | + |
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Preference number: 2 (lower is better) Translates to: RCEEWGWASQTLRVF*SESCALTHRGKASL Trigger: AAGCGAAGCCTTCCCTCTATGTGTAAGGGCACATGATTCTGACAAGAAGACTCTTAGTGTCTGAGAAGCCCATCCCCACTCTTCACATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCATTTACCGGGAGCTTCTAATCTTCTCTCAAGTTCTAGGATCTTCACAAACTCCAGGGGGTCACTaGCAGGATTCCAAAGCAACA | + |
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Preference number: 2 (lower is better) Translates to: SPIYRELLIFSQVLGSSQTPGGH*QDSKAT Trigger: TGTTGCTTTGGAATCCTGTCAGTGACCCCCTGGAGT...TTGTGAAGATCCTAGAACTTGAGAGAAGATTAGAAGCTCCCGGTAAATGGGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR TCA 90 bp | TTGACTTTACACATATTTCAAATGACCATGCATCCTGGACTCCAGGGGGTCACTGCATATGAGGGGCACTaGTTGTTGCCTGGAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: LTLHIFQMTMHPGLQGVTAYEGH*LLPGNL Trigger: CAGGTTTCCAGGCAACAATCAGTGCCCCTCATATGC...AGTGACCCCCTGGAGTCCAGGATGCATGGTCATTTGAAATATGTGTAAAGTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTTCAAGTCTGCGGGACCACAGTAATGCTAGTTTCCTGGGACTGAGACCTTTAAAAAGCAAGCCTTaGGCTAGGAAGGCAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RFSSLRDHSNASFLGLRPLKSKP*ARKAER Trigger: TCTCTCTGCCTTCCTAGCCCAAGGCTTGCTTTTTAA...AGGTCTCAGTCCCAGGAAACTAGCATTACTGTGGTCCCGCAGACTTGAAAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR TCA 90 bp | AACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCCACATAGAGTGGACGGGCAGAGAGAAACAATaGACACAGAGTCTCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: NNEHRVSILKKCSHIEWTGREKQ*TQSLHP Trigger: AGGATGGAGACTCTGTGTTCATTGTTTCTCTCTGCC...CGTCCACTCTATGTGGCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGAAATTTACATCAAAATTTCCAATCGGAACAGCTGAGTGTTTTTGGGACAGCGGTGGGAGCAGGTaGCTTCGGGGTTCAGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: ERKFTSKFPIGTAECFWDSGGSR*LRGSED Trigger: ATCTTCTGAACCCCGAAGGCACCTGCTCCCACCGCT...GTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGATGTAAATTTCCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGAATATCATAAGACTACGACGCTTCCCCAGGACTGTGGGCAGCATCTGGACGCATCTAACAGACATTaGCTACCAAAGAAGCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: LEYHKTTTLPQDCGQHLDASNRH*LPKKLN Trigger: GTTTAGCTTCTTTGGTAGCCAATGTCTGTTAGATGC...GTCCAGATGCTGCCCACAGTCCTGGGGAAGCGTCGTAGTCTTATGATATTCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGAATATCATAAGACTACGACGCTTCCCCAGGACTGTGGGCAGCATCTGGACAAGAAGCTAAACTTGTaGATGTGGTGTTATCTGATG | + |
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Preference number: 2 (lower is better) Translates to: LEYHKTTTLPQDCGQHLDKKLNL*MWCYLM Trigger: CATCAGATAACACCACATTCACAAGTTTAGCTTCTT...GTCCAGATGCTGCCCACAGTCCTGGGGAAGCGTCGTAGTCTTATGATATTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGTTTCATTTTGACACTGCCATCTTGTAGCTTGTCATACTGCTCCAACATTCACAGCCTTTCACCTTaGCTGTGTGGAGGAGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: RGFILTLPSCSLSYCSNIHSLSP*LCGGGK Trigger: CTTTCCTCCTCCACACAGTCAAGGTGAAAGGCTGTG...AATGTTGGAGCAGTATGACAAGCTACAAGATGGCAGTGTCAAAATGAAACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
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| 3UTR-3UTR GCA 90 bp | TTGACTTTACACATATTTCAAATGACCATGCATCCTGGACTCCAGGGGGTCACTACGCAGTTAACGCTCTaGAGCCTTCCTCTATCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LTLHIFQMTMHPGLQGVTTQLTL*SLPLSV Trigger: AACTGATAGAGGAAGGCTGCAGAGCGTTAACTGCGT...AGTGACCCCCTGGAGTCCAGGATGCATGGTCATTTGAAATATGTGTAAAGTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCCCATTTACCGGGAGCTTCTAATCTTCTCTCAAGTTCTAGGATCTTCACAAACGCAGTTAACGCTCTaGAGCCTTCCTCTATCAGTT | + |
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Preference number: 2 (lower is better) Translates to: SPIYRELLIFSQVLGSSQTQLTL*SLPLSV Trigger: AACTGATAGAGGAAGGCTGCAGAGCGTTAACTGCGT...TTGTGAAGATCCTAGAACTTGAGAGAAGATTAGAAGCTCCCGGTAAATGGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR GCA 90 bp | TACCTCCTAGAATATCATAAGACTACGACGCTTCCCCAGGACTGTGGGCAGCATACACAGAATGTTAGATaGAGATACATTACCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: YLLEYHKTTTLPQDCGQHTQNVR*RYITSS Trigger: GCTGCTGGTAATGTATCTGCATCTAACATTCTGTGT...ATGCTGCCCACAGTCCTGGGGAAGCGTCGTAGTCTTATGATATTCTAGGAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTGGCTCCGCGCCGTTTGGAATTAGGAAATCCTACAAAACCACACGTTTTTTGGCAAAGCAGCGCTaGATAAACTGTGCAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: QFGSAPFGIRKSYKTTRFLAKQR*INCAKT Trigger: TGTCTTTGCACAGTTTATGCAGCGCTGCTTTGCCAA...AAAACGTGTGGTTTTGTAGGATTTCCTAATTCCAAACGGCGCGGAGCCAAACTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTGCAGGACCGACTGGCAATATCAATCTTCCACCAGGCTTTAACTGGTCTTTCCACCTGGACCACTaGTTTTCTTTATCTGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: PPAGPTGNINLPPGFNWSFHLDH*FSLSVK Trigger: TTTAACAGATAAAGAAAAGCAGTGGTCCAGGTGGAA...AGACCAGTTAAAGCCTGGTGGAAGATTGATATTGCCAGTCGGTCCTGCAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCCTCCTAGCATTTTTAGAGAGAGGAAATTTACATCAAAATTTCCAATCGGCTTCCCCAGGACTGTaGGCAGCATCTGGACCTAGC | + |
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Preference number: 2 (lower is better) Translates to: TSLLAFLERGNLHQNFQSASPGL*AASGPS Trigger: GCTAGGTCCAGATGCTGCCCACAGTCCTGGGGAAGC...CGATTGGAAATTTTGATGTAAATTTCCTCTCTCTAAAAATGCTAGGAGGCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGCTGATTGTATCTACGACATGCTATCCTATGACGCCACATCAAAGGCTTGCACCTTCATGCAGCTaGTCAAACAGAAGTTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: QQLIVSTTCYPMTPHQRLAPSCS*SNRSSS Trigger: ACTAGAACTTCTGTTTGACCAGCTGCATGAAGGTGC...AAGCCTTTGATGTGGCGTCATAGGATAGCATGTCGTAGATACAATCAGCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGAAGAGTGGGGATGGGCTTCTCAGACACTAAGAGTCTTCTTGTCAGAATCATACACATATTTCAAATaGCCATGCATCCTGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: CEEWGWASQTLRVFLSESYTYFK*PCILDS Trigger: GGAGTCCAGGATGCATGGTCATTTGAAATATGTGTA...TGATTCTGACAAGAAGACTCTTAGTGTCTGAGAAGCCCATCCCCACTCTTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGAAATTTACATCAAAATTTCCAATCGGAACAGCTGAGTGTTTTTGGGACTGGTCTATTAATGCCTaGGGCACAACTGGGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ERKFTSKFPIGTAECFWDWSINA*GTTGAA Trigger: TGCAGCCCCAGTTGTGCCCCAGGCATTAATAGACCA...GTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGATGTAAATTTCCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCATTTACCGGGAGCTTCTAATCTTCTCTCAAGTTCTAGGATCTTCACAATACACATATTTCAAATaGCCATGCATCCTGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: SPIYRELLIFSQVLGSSQYTYFK*PCILDS Trigger: GGAGTCCAGGATGCATGGTCATTTGAAATATGTGTA...TTGTGAAGATCCTAGAACTTGAGAGAAGATTAGAAGCTCCCGGTAAATGGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGAAGAGTGGGGATGGGCTTCTCAGACACTAAGAGTCTTCTTGTCAGAATCAATTGTATCTACGACATaGTATCCTATGACGCCACAT | + |
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Preference number: 2 (lower is better) Translates to: CEEWGWASQTLRVFLSESIVSTT*YPMTPH Trigger: ATGTGGCGTCATAGGATAGCATGTCGTAGATACAAT...TGATTCTGACAAGAAGACTCTTAGTGTCTGAGAAGCCCATCCCCACTCTTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTCAAGCTCACGTTGCTTTCACAGTTCATCCCTGGACCACTGCTTTTCTTTATGTAGCTTGTCATACTaGTCCAACATTTGGTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: WSSSRCFHSSSLDHCFSLCSLSY*SNIWFP Trigger: AGGAAACCAAATGTTGGAGCAGTATGACAAGCTACA...TAAAGAAAAGCAGTGGTCCAGGGATGAACTGTGAAAGCAACGTGAGCTTGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAGGCAGAGAGAAACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCGCATCTAACAGACATTaGCTACCAAAGAAGCTAAAC | + |
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Preference number: 2 (lower is better) Translates to: RKAERNNEHRVSILKKCSASNRH*LPKKLN Trigger: GTTTAGCTTCTTTGGTAGCCAATGTCTGTTAGATGC...GCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTTTCTCTCTGCCTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR CCA 90 bp | CATTCACCCAGTCACTCATTGAGCATTTACTACAGAGCTATTAAAAAGCAAGCCACAGCTGAGTGTTTTTaGGACACCACCTGCCATCAT | + |
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Preference number: 2 (lower is better) Translates to: HSPSHSLSIYYRAIKKQATAECF*DTTCHH Trigger: ATGATGGCAGGTGGTGTCCCAAAAACACTCAGCTGT...GGCTTGCTTTTTAATAGCTCTGTAGTAAATGCTCAATGAGTGACTGGGTGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGAAGAGTGGGGATGGGCTTCTCAGACACTAAGAGTCTTCTTGTCAGAATCATTCACAGTTCATCCCTaGACCACTGCTTTTCTTTAT | + |
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Preference number: 2 (lower is better) Translates to: CEEWGWASQTLRVFLSESFTVHP*TTAFLY Trigger: ATAAAGAAAAGCAGTGGTCCAGGGATGAACTGTGAA...TGATTCTGACAAGAAGACTCTTAGTGTCTGAGAAGCCCATCCCCACTCTTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
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| 3UTR CAA 90 bp | TTATCTGTTAAAGGCACGTATATCACCCCCATGAGAGGTTTCATTTaGACACTGCCATCTTGTAGCTTGTCATACTGCTCCAACATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LSVKGTYITPMRGFI*TLPSCSLSYCSNIW Trigger: CCAAATGTTGGAGCAGTATGACAAGCTACAAGATGGCAGTGTCAAAATGAAACCTCTCATGGGGGTGATATACGTGCCTTTAACAGATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161123.8 ENSMUST00000161428.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGAAGAGTGGGGATGGGCTTCTCAGACACTAAGAGTCTTCTTGTCAGAATCAGCTTTAAAGCCTGAGTaGACATTTGACTTTACACAT | + |
|
Preference number: 2 (lower is better) Translates to: CEEWGWASQTLRVFLSESALKPE*TFDFTH Trigger: ATGTGTAAAGTCAAATGTTCACTCAGGCTTTAAAGC...TGATTCTGACAAGAAGACTCTTAGTGTCTGAGAAGCCCATCCCCACTCTTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGAGAGAAACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCCACATAATTGTATCTACGACATaGTATCCTATGACGCCACAT | + |
|
Preference number: 2 (lower is better) Translates to: AERNNEHRVSILKKCSHIIVSTT*YPMTPH Trigger: ATGTGGCGTCATAGGATAGCATGTCGTAGATACAAT...TATGTGGCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTTTCTCTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGATATTGAGCTACAAGCCTCCTAGCATTTTTAGAGAGAGGAAATTTACATCATGTTGCCTGGAAACCTaGTGCTCTGCCTCTGAAGCA | + |
|
Preference number: 2 (lower is better) Translates to: MILSYKPPSIFRERKFTSCCLET*CSASEA Trigger: TGCTTCAGAGGCAGAGCAGCAGGTTTCCAGGCAACA...TGATGTAAATTTCCTCTCTCTAAAAATGCTAGGAGGCTTGTAGCTCAATATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGAGAGAAACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCCACATAATAAGATCTTCAAAGTaGCATTGCCTTCACAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: AERNNEHRVSILKKCSHIIRSSK*HCLHRH Trigger: ATGTCTGTGAAGGCAATGGCACTTTGAAGATCTTAT...TATGTGGCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTTTCTCTCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR-3UTR GCA 90 bp | AAATTTACATCAAAATTTCCAATCGGAACAGCTGAGTGTTTTTGGGACACCACCGCTTTAGCACCTTCATaGAGCTGGTCAAACAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: KFTSKFPIGTAECFWDTTALAPS*SWSNRS Trigger: ACTTCTGTTTGACCAGCTGCATGAAGGTGCTAAAGC...GGTGGTGTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGATGTAAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGATATTGAGCTACAAGCCTCCTAGCATTTTTAGAGAGAGGAAATTTACATCACGAGGACAGGAGCATTaGGTCATCCTTTTTGACATT | + |
|
Preference number: 2 (lower is better) Translates to: MILSYKPPSIFRERKFTSRGQEH*VILFDI Trigger: AATGTCAAAAAGGATGACCCAATGCTCCTGTCCTCG...TGATGTAAATTTCCTCTCTCTAAAAATGCTAGGAGGCTTGTAGCTCAATATCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAGCCTCCTAGCATTTTTAGAGAGAGGAAATTTACATCAAAATTTCCAATCGGCATCTAACAGACATTaGCTACCAAAGAAGCTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TSLLAFLERGNLHQNFQSASNRH*LPKKLN Trigger: GTTTAGCTTCTTTGGTAGCCAATGTCTGTTAGATGC...CGATTGGAAATTTTGATGTAAATTTCCTCTCTCTAAAAATGCTAGGAGGCTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR-3UTR CAA 90 bp | TACGACGCTTCCCCAGGACTGTGGGCAGCATCTGGACCTAGCAGACCTGTGTCCCAAGCTGTGATGCTGTaGGTTCTCAAATGCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: YDASPGLWAASGPSRPVSQAVML*VLKCCK Trigger: CTTACAGCATTTGAGAACCAACAGCATCACAGCTTG...GGACACAGGTCTGCTAGGTCCAGATGCTGCCCACAGTCCTGGGGAAGCGTCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR TCA 72 bp | TTCCACTATTTCCAACCATCCGTGCAAAACAGGCGGTaGGGATTCCACTTCCAGAGCCCACGTCCAGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: FHYFQPSVQNRR*GFHFQSPRPGL Trigger: AAGCCCTGGACGTGGGCTCTGGAAGTGGAATCCTCACCGCCTGTTTTGCACGGATGGTTGGAAATAGTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| 3UTR-3UTR CAA 90 bp | TACGACGCTTCCCCAGGACTGTGGGCAGCATCTGGACCTAGCAGACCTGTGTCCACACTAAGAGTCTTCTaGTCAGAATCATGTGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: YDASPGLWAASGPSRPVSTLRVF*SESCAL Trigger: AAGGGCACATGATTCTGACAAGAAGACTCTTAGTGT...GGACACAGGTCTGCTAGGTCCAGATGCTGCCCACAGTCCTGGGGAAGCGTCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR GCA 72 bp | GGCCCACTGCGGTTTATAGACTGGTCAAGCTCACGTTaGTTTCACAGTTCATCCCTTGACTGTGTGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GPLRFIDWSSSR*FHSSSLDCVEE Trigger: CTCCTCCACACAGTCAAGGGATGAACTGTGAAAGCAACGTGAGCTTGACCAGTCTATAAACCGCAGTGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159917.8 |
||
| 3UTR GCA 72 bp | GTGGGCATGTTAAAACAACACACGCAGTTAACGCTCTaGAGCCTTCCTCTATCAGTTTGGCTCCGCGCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: VGMLKQHTQLTL*SLPLSVWLRAV Trigger: AACGGCGCGGAGCCAAACTGATAGAGGAAGGCTGCAGAGCGTTAACTGCGTGTGTTGTTTTAACATGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR GCA 72 bp | CTTCCAGAGCCCACGTCCAGGGCTTTAGCACCTTCATaGAGCTGGTCAAACAGAAGTTCTAGTGCATATGCG | + |
|
Preference number: 3 (lower is better) Translates to: LPEPTSRALAPS*SWSNRSSSAYA Trigger: CGCATATGCACTAGAACTTCTGTTTGACCAGCTGCATGAAGGTGCTAAAGCCCTGGACGTGGGCTCTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGGGGTCACTGACAGGATTCCAAAGCAACAACCAGCAGCAAACCAAAGCTATACTGCTCCAACATTaGGTTTCCTCCTGCAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: SRGSLTGFQSNNQQQTKAILLQH*VSSCRT Trigger: GGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTAT...AGCTTTGGTTTGCTGCTGGTTGTTGCTTTGGAATCCTGTCAGTGACCCCCTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| 3UTR GCA 72 bp | GGCCCACTGCGGTTTATAGACTGGTCAAGCTCACGTTaGTTTCACAGTTCATCCCTGGACCACTGCTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GPLRFIDWSSSR*FHSSSLDHCFS Trigger: AGAAAAGCAGTGGTCCAGGGATGAACTGTGAAAGCAACGTGAGCTTGACCAGTCTATAAACCGCAGTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| 3UTR CCA 72 bp | GAGCCCACGTCCAGGGCTTTAGCACCTTCATGCAGCTaGTCAAACAGAAGTTCTAGTGCATATGCGTGCATA | + |
|
Preference number: 3 (lower is better) Translates to: EPTSRALAPSCS*SNRSSSAYACI Trigger: TATGCACGCATATGCACTAGAACTTCTGTTTGACCAGCTGCATGAAGGTGCTAAAGCCCTGGACGTGGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| 3UTR CCA 72 bp | CCGACTGGCAATATCAATCTTCCACCAGGCTTTAACTaGTCTATTAATGCCTGGGGCACAACTGGGGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PTGNINLPPGFN*SINAWGTTGAA Trigger: TGCAGCCCCAGTTGTGCCCCAGGCATTAATAGACCAGTTAAAGCCTGGTGGAAGATTGATATTGCCAGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| 3UTR-3UTR CAA 90 bp | TACCTCCTAGAATATCATAAGACTACGACGCTTCCCCAGGACTGTGGGCAGCATTTCACAGTTCATCCCTaGACTGTGTGGAGGAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: YLLEYHKTTTLPQDCGQHFTVHP*TVWRRK Trigger: TTTCCTCCTCCACACAGTCAAGGGATGAACTGTGAA...ATGCTGCCCACAGTCCTGGGGAAGCGTCGTAGTCTTATGATATTCTAGGAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159917.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCAAGTCTGCGGGACCACAGTAATGCTAGTTTCCTGGGACTGAGACCTAAGCTGGTCAAGCTCACGTaGCTTTCACAGTTCATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FSSLRDHSNASFLGLRPKLVKLT*LSQFIP Trigger: AGGGATGAACTGTGAAAGCAACGTGAGCTTGACCAG...CTTAGGTCTCAGTCCCAGGAAACTAGCATTACTGTGGTCCCGCAGACTTGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTGCGGGACCACAGTAATGCTAGTTTCCTGGGACTGAGACCTAAGCCAAGAACACTAAGAGTCTTCTaGTCAGAATCATGTGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: SLRDHSNASFLGLRPKPRTLRVF*SESCAL Trigger: AAGGGCACATGATTCTGACAAGAAGACTCTTAGTGT...TCTTGGCTTAGGTCTCAGTCCCAGGAAACTAGCATTACTGTGGTCCCGCAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR CCA 72 bp | CTGCCATCTTGTAGCTTGTCATACTGCTCCAACATTTaGTTTCCTCCTGCAGGACCGACTGGCAATATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LPSCSLSYCSNI*FPPAGPTGNIN Trigger: ATTGATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTATGACAAGCTACAAGATGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161123.8 ENSMUST00000161428.8 |
||
| 3UTR GCA 72 bp | CCAATCGGAACAGCTGAGTGTTTTTGGGACACCACCTaGCATCATCGTCGTCTCAAGTTTCAGTATTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: PIGTAECFWDTT*HHRRLKFQYLQ Trigger: TTGTAAATACTGAAACTTGAGACGACGATGATGGCAGGTGGTGTCCCAAAAACACTCAGCTGTTCCGATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR GCA 72 bp | TTCATTTTGACACTGCCATCTTGTAGCTTGTCATACTaGTCCAACATTTGGTTTCCTCCTGCAGGACCGACT | + |
|
Preference number: 3 (lower is better) Translates to: FILTLPSCSLSY*SNIWFPPAGPT Trigger: AGTCGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTATGACAAGCTACAAGATGGCAGTGTCAAAATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161123.8 ENSMUST00000161428.8 |
||
| 3UTR CCA 72 bp | AGGATTCCAAAGCAACAACCAGCAGCAAACCAAAGCTaGTTAAGGTTTTCAAGTCTGCGGGACCACAGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: RIPKQQPAANQS*LRFSSLRDHSN Trigger: ATTACTGTGGTCCCGCAGACTTGAAAACCTTAACCAGCTTTGGTTTGCTGCTGGTTGTTGCTTTGGAATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTCACCCAGTCACTCATTGAGCATTTACTACAGAGCTATTAAAAAGCAAGCCCTGGTCAAGCTCACGTaGCTTTCACAGTTCATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HSPSHSLSIYYRAIKKQALVKLT*LSQFIP Trigger: AGGGATGAACTGTGAAAGCAACGTGAGCTTGACCAG...GGCTTGCTTTTTAATAGCTCTGTAGTAAATGCTCAATGAGTGACTGGGTGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCGAGTCAAACTGACCATGCAACACTTGTCACTCTTTAATGCCATGAGTTTCCACTCAAATCAGCTCTaGCAGGCTAAGGTCTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LRVKLTMQHLSLFNAMSFHSNQL*QAKVLK Trigger: CTTTAAGACCTTAGCCTGCAAGAGCTGATTTGAGTG...GAAACTCATGGCATTAAAGAGTGACAAGTGTTGCATGGTCAGTTTGACTCGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| 3UTR TCA 72 bp | GAGGAAATTTACATCAAAATTTCCAATCGGAACAGCTaGGTGTTTTTGGGACACCACCTGCCATCATCGTCG | + |
|
Preference number: 3 (lower is better) Translates to: EEIYIKISNRNS*VFLGHHLPSSS Trigger: CGACGATGATGGCAGGTGGTGTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGATGTAAATTTCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR GCA 72 bp | AGAAACAATGAACACAGAGTCTCCATCCTGAAGAAATaGAGCCACATAGAGTGGACGAATGCTATGCATATC | + |
|
Preference number: 3 (lower is better) Translates to: RNNEHRVSILKK*SHIEWTNAMHI Trigger: GATATGCATAGCATTCGTCCACTCTATGTGGCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR CCA 72 bp | AGAGTCTCCATCCTGAAGAAATGCAGCCACATAGAGTaGACGAATGCTATGCATATCTACCTCCTAGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: RVSILKKCSHIE*TNAMHIYLLEY Trigger: ATATTCTAGGAGGTAGATATGCATAGCATTCGTCCACTCTATGTGGCTGCATTTCTTCAGGATGGAGACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR GCA 72 bp | AAGAGCAGAAGAGAAAATCACTTCCACCTGGACCACTaGTTTTCTTTATCTGTTAAAGGCACGTATATCACC | + |
|
Preference number: 3 (lower is better) Translates to: KSRRENHFHLDH*FSLSVKGTYIT Trigger: GGTGATATACGTGCCTTTAACAGATAAAGAAAAGCAGTGGTCCAGGTGGAAGTGATTTTCTCTTCTGCTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATTGGCTACCAAAGAAGCTAAACTTGTGAATGTGGTGTTATCTGATGCACAACAAGCTGTGATGCTGTaGGTTCTCAAATGCTGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: TLATKEAKLVNVVLSDAQQAVML*VLKCCK Trigger: CTTACAGCATTTGAGAACCAACAGCATCACAGCTTG...TTGTGCATCAGATAACACCACATTCACAAGTTTAGCTTCTTTGGTAGCCAATGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR GCA 72 bp | TGTGCAAAGACACGACCGCTTACACAGAATGTTAGATaGAGATACATTACCAGCAGCAAACTAGAAACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CAKTRPLTQNVR*RYITSSKLETN Trigger: ATTTGTTTCTAGTTTGCTGCTGGTAATGTATCTGCATCTAACATTCTGTGTAAGCGGTCGTGTCTTTGCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| 3UTR TCA 72 bp | CATTCTTCCTCATACTACATTCACCCAGTCACTCATTaGGCATTTACTACAGAGCTATTAAAAAGCAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HSSSYYIHPVTH*AFTTELLKSKP Trigger: AGGCTTGCTTTTTAATAGCTCTGTAGTAAATGCTCAATGAGTGACTGGGTGAATGTAGTATGAGGAAGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAGCATCTGGACCTAGCAGACCTGTGTCCTTCTAGATTCAAAGGCCACCAAGTGCAAAACAGGCGGTaGGGATTCCACTTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQHLDLADLCPSRFKGHQVQNRR*GFHFQS Trigger: GCTCTGGAAGTGGAATCCTCACCGCCTGTTTTGCAC...TTGGTGGCCTTTGAATCTAGAAGGACACAGGTCTGCTAGGTCCAGATGCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAAATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTTTAGCTCCGAGTGGCTaGCGCCGCCGGATTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSNQLLQAKVLKPTAFHLLAPSG*RRRISR Trigger: CCTGGAAATCCGGCGGCGCCAGCCACTCGGAGCTAA...AAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATTTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR CCA 90 bp | TACGACGCTTCCCCAGGACTGTGGGCAGCATCTGGACCTAGCAGACCTGTGTCCGCACCTTCATGCAGCTaGTCAAACAGAAGTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YDASPGLWAASGPSRPVSAPSCS*SNRSSS Trigger: ACTAGAACTTCTGTTTGACCAGCTGCATGAAGGTGC...GGACACAGGTCTGCTAGGTCCAGATGCTGCCCACAGTCCTGGGGAAGCGTCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAAATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTTGCCTGGGGCACAACTaGGGCTGCAGCTCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: HSNQLLQAKVLKPTAFHLCLGHN*GCSSHM Trigger: CATGTGGGAGCTGCAGCCCCAGTTGTGCCCCAGGCA...AAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATTTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| CDS-3UTR TCA 90 bp | CATCTTGTAGCTTGTCATACTGCTCCAACATTTGGTTTCCTCCTGCAGGACCGACCTTCAGTGCTGGGATaGGAACAGACTGCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLVACHTAPTFGFLLQDRPSVLG*EQTAWG Trigger: GCCCCAGGCAGTCTGTTCTCATCCCAGCACTGAAGG...TCGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTATGACAAGCTACAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR CCA 90 bp | CGCTGCATAAACTGTGCAAAGACACGACCGCTTACACAGAATGTTAGATGCAGATTAGCTCCGAGTGGCTaGCGCCGCCGGATTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCINCAKTRPLTQNVRCRLAPSG*RRRISR Trigger: CCTGGAAATCCGGCGGCGCCAGCCACTCGGAGCTAA...TCTGCATCTAACATTCTGTGTAAGCGGTCGTGTCTTTGCACAGTTTATGCAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGGGTCACTGACAGGATTCCAAAGCAACAACCAGCAGCAAACCAAAGCTTCTTGCGGAGGTTGTaGATTAGCTCCGAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQGVTDRIPKQQPAANQSFLRRL*ISSEWL Trigger: CAGCCACTCGGAGCTAATCCACAACCTCCGCAAGAA...GCTTTGGTTTGCTGCTGGTTGTTGCTTTGGAATCCTGTCAGTGACCCCCTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | TTCCACCTGGACCACTGCTTTTCTTTATCTGTTAAAGGCACGTATATCACCCCCTGCCTGGGGCACAACTaGGGCTGCAGCTCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: FHLDHCFSLSVKGTYITPCLGHN*GCSSHM Trigger: CATGTGGGAGCTGCAGCCCCAGTTGTGCCCCAGGCA...GGGGGTGATATACGTGCCTTTAACAGATAAAGAAAAGCAGTGGTCCAGGTGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR CCA 90 bp | AACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCCACATAGAGTGGACGTGCCTGGGGCACAACTaGGGCTGCAGCTCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: NNEHRVSILKKCSHIEWTCLGHN*GCSSHM Trigger: CATGTGGGAGCTGCAGCCCCAGTTGTGCCCCAGGCA...CGTCCACTCTATGTGGCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGGGTCACTGACAGGATTCCAAAGCAACAACCAGCAGCAAACCAAAGCTGGTCTATTAATGCCTaGGGCACAACTGGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LQGVTDRIPKQQPAANQSWSINA*GTTGAA Trigger: TGCAGCCCCAGTTGTGCCCCAGGCATTAATAGACCA...GCTTTGGTTTGCTGCTGGTTGTTGCTTTGGAATCCTGTCAGTGACCCCCTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGAGAAACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCCACATATTAGCTCCGAGTGGCTaGCGCCGCCGGATTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AERNNEHRVSILKKCSHILAPSG*RRRISR Trigger: CCTGGAAATCCGGCGGCGCCAGCCACTCGGAGCTAA...TATGTGGCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTTTCTCTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGCAGGACCGACTGGCAATATCAATCTTCCACCAGGCTTTAACTGGTCTGGATGCCTTCAGTGCTaGGATGAGAACAGACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPAGPTGNINLPPGFNWSGCLQC*DENRLP Trigger: AGGCAGTCTGTTCTCATCCCAGCACTGAAGGCATCC...AGACCAGTTAAAGCCTGGTGGAAGATTGATATTGCCAGTCGGTCCTGCAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR TCA 90 bp | CTCTATCAGTTTGGCTCCGCGCCGTTTGGAATTAGGAAATCCTACAAAACCACACAGTTTCCCCAAGAGTaGGACCACCTCCCACACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LYQFGSAPFGIRKSYKTTQFPQE*DHLPHG Trigger: ACCGTGTGGGAGGTGGTCTCACTCTTGGGGAAACTG...TGTGGTTTTGTAGGATTTCCTAATTCCAAACGGCGCGGAGCCAAACTGATAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTTGGCTCCGCGCCGTTTGGAATTAGGAAATCCTACAAAACCACACGTTTTCAGTTTCCCCAAGAGTaGGACCACCTCCCACACGGT | + |
|
Preference number: 4 (lower is better) Translates to: QFGSAPFGIRKSYKTTRFQFPQE*DHLPHG Trigger: ACCGTGTGGGAGGTGGTCTCACTCTTGGGGAAACTG...AAAACGTGTGGTTTTGTAGGATTTCCTAATTCCAAACGGCGCGGAGCCAAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR TCA 90 bp | CATCTTGTAGCTTGTCATACTGCTCCAACATTTGGTTTCCTCCTGCAGGACCGAGTGCAAAACAGGCGGTaGGGATTCCACTTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLVACHTAPTFGFLLQDRVQNRR*GFHFQS Trigger: GCTCTGGAAGTGGAATCCTCACCGCCTGTTTTGCAC...TCGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTATGACAAGCTACAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR TCA 90 bp | AATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTGACTGTGTGCAAAACAGGCGGTaGGGATTCCACTTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NQLLQAKVLKPTAFHLDCVQNRR*GFHFQS Trigger: GCTCTGGAAGTGGAATCCTCACCGCCTGTTTTGCAC...ACAGTCAAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| 3UTR CAA 72 bp | CACGCAGTTAACGCTCTGCAGCCTTCCTCTATCAGTTaGGCTCCGCGCCGTTTGGAATTAGGAAATCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: HAVNALQPSSIS*APRRLELGNPT Trigger: TGTAGGATTTCCTAATTCCAAACGGCGCGGAGCCAAACTGATAGAGGAAGGCTGCAGAGCGTTAACTGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAAAGCTGCGAGTCAAACTGACCATGCAACACTTGTCACTCTTTAATGCCCAGTTTCCCCAAGAGTaGGACCACCTCCCACACGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLKLRVKLTMQHLSLFNAQFPQE*DHLPHG Trigger: ACCGTGTGGGAGGTGGTCTCACTCTTGGGGAAACTG...GGCATTAAAGAGTGACAAGTGTTGCATGGTCAGTTTGACTCGCAGCTTTAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTGGCAAAGCAGCGCTGCATAAACTGTGCAAAGACACGACCGCTTACACAGTGCAAAACAGGCGGTaGGGATTCCACTTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFGKAALHKLCKDTTAYTVQNRR*GFHFQS Trigger: GCTCTGGAAGTGGAATCCTCACCGCCTGTTTTGCAC...TGTGTAAGCGGTCGTGTCTTTGCACAGTTTATGCAGCGCTGCTTTGCCAAATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | GAGGACAGGAGCATTGGGTCATCCTTTTTGACATTAGTTATTGAGTCATCTACTTTAGCTCCGAGTGGCTaGCGCCGCCGGATTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDRSIGSSFLTLVIESSTLAPSG*RRRISR Trigger: CCTGGAAATCCGGCGGCGCCAGCCACTCGGAGCTAA...AGTAGATGACTCAATAACTAATGTCAAAAAGGATGACCCAATGCTCCTGTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGGGGTCACTGACAGGATTCCAAAGCAACAACCAGCAGCAAACCAAAGCGCACCTTCATGCAGCTaGTCAAACAGAAGTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQGVTDRIPKQQPAANQSAPSCS*SNRSSS Trigger: ACTAGAACTTCTGTTTGACCAGCTGCATGAAGGTGC...GCTTTGGTTTGCTGCTGGTTGTTGCTTTGGAATCCTGTCAGTGACCCCCTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | CACTCAAATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTTGGTCTATTAATGCCTaGGGCACAACTGGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSNQLLQAKVLKPTAFHLWSINA*GTTGAA Trigger: TGCAGCCCCAGTTGTGCCCCAGGCATTAATAGACCA...AAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATTTGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR CCA 90 bp | TACCTCCTAGAATATCATAAGACTACGACGCTTCCCCAGGACTGTGGGCAGCATTACTGCTCCAACATTTaGTTTCCTCCTGCAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: YLLEYHKTTTLPQDCGQHYCSNI*FPPAGP Trigger: CGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTA...ATGCTGCCCACAGTCCTGGGGAAGCGTCGTAGTCTTATGATATTCTAGGAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR TCA 90 bp | AATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTGACTGTGCATATGAGGGGCACTaGTTGTTGCCTGGAAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: NQLLQAKVLKPTAFHLDCAYEGH*LLPGNL Trigger: TAGGTTTCCAGGCAACAATCAGTGCCCCTCATATGC...ACAGTCAAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTGGCAAAGCAGCGCTGCATAAACTGTGCAAAGACACGACCGCTTACACATTCTTGCGGAGGTTGTaGATTAGCTCCGAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFGKAALHKLCKDTTAYTFLRRL*ISSEWL Trigger: CAGCCACTCGGAGCTAATCCACAACCTCCGCAAGAA...TGTGTAAGCGGTCGTGTCTTTGCACAGTTTATGCAGCGCTGCTTTGCCAAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTGACTGTGTGGAGGAGGCACCTTCATGCAGCTaGTCAAACAGAAGTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQAKVLKPTAFHLDCVEEAPSCS*SNRSSS Trigger: ACTAGAACTTCTGTTTGACCAGCTGCATGAAGGTGC...CTCCTCCACACAGTCAAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGCTGATTGTATCTACGACATGCTATCCTATGACGCCACATCAAAGGCTTGGTCTATTAATGCCTaGGGCACAACTGGGGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TAADCIYDMLSYDATSKAWSINA*GTTGAA Trigger: TGCAGCCCCAGTTGTGCCCCAGGCATTAATAGACCA...AGCCTTTGATGTGGCGTCATAGGATAGCATGTCGTAGATACAATCAGCTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| 3UTR CAA 72 bp | CTGCAGCCTTCCTCTATCAGTTTGGCTCCGCGCCGTTaGGAATTAGGAAATCCTACAAAACCACACGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQPSSISLAPRR*ELGNPTKPHVF Trigger: GAAAACGTGTGGTTTTGTAGGATTTCCTAATTCCAAACGGCGCGGAGCCAAACTGATAGAGGAAGGCTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR GCA 90 bp | CACTCAAATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTCATTTGGTTTCCTCCTaGAGGACCGACTGGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: HSNQLLQAKVLKPTAFHLHLVSS*RTDWQY Trigger: ATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATG...AAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATTTGAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGGAAATTTACATCAAAATTTCCAATCGGAACAGCTGAGTGTTTTTGGGACTGGATTAGCTCCGAGTaGCTGGCGCCGCCGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ERKFTSKFPIGTAECFWDWISSE*LAPPDF Trigger: GAAATCCGGCGGCGCCAGCCACTCGGAGCTAATCCA...GTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGATGTAAATTTCCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGAGAAACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCCACATATTCTTGCGGAGGTTGTaGATTAGCTCCGAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AERNNEHRVSILKKCSHIFLRRL*ISSEWL Trigger: CAGCCACTCGGAGCTAATCCACAACCTCCGCAAGAA...TATGTGGCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTTTCTCTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAAAGCTGCGAGTCAAACTGACCATGCAACACTTGTCACTCTTTAATGCCTTCTTGCGGAGGTTGTaGATTAGCTCCGAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLKLRVKLTMQHLSLFNAFLRRL*ISSEWL Trigger: CAGCCACTCGGAGCTAATCCACAACCTCCGCAAGAA...GGCATTAAAGAGTGACAAGTGTTGCATGGTCAGTTTGACTCGCAGCTTTAGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTGACTGTGTGGAGGAGGCACTGATTGTTGCCTaGAAACCTATTGATTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQAKVLKPTAFHLDCVEEALIVA*KPIDCG Trigger: TCCACAATCAATAGGTTTCCAGGCAACAATCAGTGC...CTCCTCCACACAGTCAAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| CDS-3UTR CCA 90 bp | CGCTGCATAAACTGTGCAAAGACACGACCGCTTACACAGAATGTTAGATGCAGATACTGCTCCAACATTTaGTTTCCTCCTGCAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: RCINCAKTRPLTQNVRCRYCSNI*FPPAGP Trigger: CGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTA...TCTGCATCTAACATTCTGTGTAAGCGGTCGTGTCTTTGCACAGTTTATGCAGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTAAAGCTGCGAGTCAAACTGACCATGCAACACTTGTCACTCTTTAATGCCGCATATGAGGGGCACTaGTTGTTGCCTGGAAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLKLRVKLTMQHLSLFNAAYEGH*LLPGNL Trigger: TAGGTTTCCAGGCAACAATCAGTGCCCCTCATATGC...GGCATTAAAGAGTGACAAGTGTTGCATGGTCAGTTTGACTCGCAGCTTTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| CDS-3UTR TCA 90 bp | ATCTTCCACCAGGCTTTAACTGGTCTATTAATGCCTGGGGCACAACTGGGGCTGCTCAGCAAAACCTATTaGTTGTGGAGAATCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: IFHQALTGLLMPGAQLGLLSKTY*LWRIHV Trigger: TACATGGATTCTCCACAATCAATAGGTTTTGCTGAG...CAGCCCCAGTTGTGCCCCAGGCATTAATAGACCAGTTAAAGCCTGGTGGAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| CDS-3UTR GCA 90 bp | CACTCAAATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTGCTTTAGCACCTTCATaGAGCTGGTCAAACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSNQLLQAKVLKPTAFHLALAPS*SWSNRS Trigger: ACTTCTGTTTGACCAGCTGCATGAAGGTGCTAAAGC...AAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATTTGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| CDS-3UTR GCA 90 bp | AAATTTACATCAAAATTTCCAATCGGAACAGCTGAGTGTTTTTGGGACACCACCGGGCACAACTGGGGCTaGAGCTCCCACATGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: KFTSKFPIGTAECFWDTTGHNWG*SSHMNS Trigger: GCTATTCATGTGGGAGCTGCAGCCCCAGTTGTGCCC...GGTGGTGTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGATGTAAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR GCA 90 bp | AACAATGAACACAGAGTCTCCATCCTGAAGAAATGCAGCCACATAGAGTGGACGCATTTGGTTTCCTCCTaGAGGACCGACTGGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: NNEHRVSILKKCSHIEWTHLVSS*RTDWQY Trigger: ATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATG...CGTCCACTCTATGTGGCTGCATTTCTTCAGGATGGAGACTCTGTGTTCATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGGGGTCACTGACAGGATTCCAAAGCAACAACCAGCAGCAAACCAAAGCTTGTAGCTTGTCATACTaGTCCAACATTTGGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGSLTGFQSNNQQQTKACSLSY*SNIWFP Trigger: AGGAAACCAAATGTTGGAGCAGTATGACAAGCTACA...AGCTTTGGTTTGCTGCTGGTTGTTGCTTTGGAATCCTGTCAGTGACCCCCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | AATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTGACTGTCGAGGACAGGAGCATTaGGTCATCCTTTTTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: NQLLQAKVLKPTAFHLDCRGQEH*VILFDI Trigger: AATGTCAAAAAGGATGACCCAATGCTCCTGTCCTCG...ACAGTCAAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| CDS-3UTR CCA 90 bp | ATGATATTGAGCTACAAGCCTCCTAGCATTTTTAGAGAGAGGAAATTTACATCATGCCTGGGGCACAACTaGGGCTGCAGCTCCCACATG | + |
|
Preference number: 4 (lower is better) Translates to: MILSYKPPSIFRERKFTSCLGHN*GCSSHM Trigger: CATGTGGGAGCTGCAGCCCCAGTTGTGCCCCAGGCA...TGATGTAAATTTCCTCTCTCTAAAAATGCTAGGAGGCTTGTAGCTCAATATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | TTCCTAAAGCTGCGAGTCAAACTGACCATGCAACACTTGTCACTCTTTAATGCCTACTGCTCCAACATTTaGTTTCCTCCTGCAGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: FLKLRVKLTMQHLSLFNAYCSNI*FPPAGP Trigger: CGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTA...GGCATTAAAGAGTGACAAGTGTTGCATGGTCAGTTTGACTCGCAGCTTTAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAGCTGATTGTATCTACGACATGCTATCCTATGACGCCACATCAAAGGCTTGCTTTAGCACCTTCATaGAGCTGGTCAAACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QQLIVSTTCYPMTPHQRLALAPS*SWSNRS Trigger: ACTTCTGTTTGACCAGCTGCATGAAGGTGCTAAAGC...AAGCCTTTGATGTGGCGTCATAGGATAGCATGTCGTAGATACAATCAGCTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR GCA 90 bp | ATACTGCTCCAACATTTGGTTTCCTCCTGCAGGACCGACTGGCAATATCAATCTGCTTTAGCACCTTCATaGAGCTGGTCAAACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLQHLVSSCRTDWQYQSALAPS*SWSNRS Trigger: ACTTCTGTTTGACCAGCTGCATGAAGGTGCTAAAGC...AGATTGATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR GCA 90 bp | CGCTGCATAAACTGTGCAAAGACACGACCGCTTACACAGAATGTTAGATGCAGAGCTTTAGCACCTTCATaGAGCTGGTCAAACAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCINCAKTRPLTQNVRCRALAPS*SWSNRS Trigger: ACTTCTGTTTGACCAGCTGCATGAAGGTGCTAAAGC...TCTGCATCTAACATTCTGTGTAAGCGGTCGTGTCTTTGCACAGTTTATGCAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGAGCAGAAGAGAAAATCACTTCCACCTGGACCACTGCTTTTCTTTATCTGACTGGATGCCTTCAGTaGTGGGATGAGAACAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ERAEEKITSTWTTAFLYLTGCLQ*WDENRL Trigger: CAGTCTGTTCTCATCCCAGCACTGAAGGCATCCAGT...CAGATAAAGAAAAGCAGTGGTCCAGGTGGAAGTGATTTTCTCTTCTGCTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR CCA 90 bp | TCCAACATTTGGTTTCCTCCTGCAGGACCGACTGGCAATATCAATCTTCCACCAGCACTGATTGTTGCCTaGAAACCTATTGATTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNIWFPPAGPTGNINLPPALIVA*KPIDCG Trigger: TCCACAATCAATAGGTTTCCAGGCAACAATCAGTGC...TGGTGGAAGATTGATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATGTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTTCATTTTGACACTGCCATCTTGTAGCTTGTCATACTGCTCCAACATTGAGCAGGGCTGCATGTaGAGGTTAAACTGGATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGFILTLPSCSLSYCSNIEQGCM*RLNWMP Trigger: AGGCATCCAGTTTAACCTCCACATGCAGCCCTGCTC...AATGTTGGAGCAGTATGACAAGCTACAAGATGGCAGTGTCAAAATGAAACCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| 3UTR CAA 72 bp | AAAGGCACGTATATCACCCCCATGAGAGGTTTCATTTaGACACTGCCATCTTGTAGCTTGTCATACTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGTYITPMRGFI*TLPSCSLSYCS Trigger: GGAGCAGTATGACAAGCTACAAGATGGCAGTGTCAAAATGAAACCTCTCATGGGGGTGATATACGTGCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161123.8 ENSMUST00000161428.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTTGGCTCCGCGCCGTTTGGAATTAGGAAATCCTACAAAACCACACGTTTTTGCCTGGAAACCTATTaGTTGTGGAGAATCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QFGSAPFGIRKSYKTTRFCLETY*LWRIHV Trigger: TACATGGATTCTCCACAATCAATAGGTTTCCAGGCA...AAAACGTGTGGTTTTGTAGGATTTCCTAATTCCAAACGGCGCGGAGCCAAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR TCA 90 bp | ATACTGCTCCAACATTTGGTTTCCTCCTGCAGGACCGACTGGCAATATCAATCTTGCCTGGAAACCTATTaGTTGTGGAGAATCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: ILLQHLVSSCRTDWQYQSCLETY*LWRIHV Trigger: TACATGGATTCTCCACAATCAATAGGTTTCCAGGCA...AGATTGATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR GCA 90 bp | TTTTCAAGTCTGCGGGACCACAGTAATGCTAGTTTCCTGGGACTGAGACCTAAGTGTAGCTTGTCATACTaGTCCAACATTTGGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSSLRDHSNASFLGLRPKCSLSY*SNIWFP Trigger: AGGAAACCAAATGTTGGAGCAGTATGACAAGCTACA...CTTAGGTCTCAGTCCCAGGAAACTAGCATTACTGTGGTCCCGCAGACTTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR GCA 90 bp | AATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTGACTGTTGTAGCTTGTCATACTaGTCCAACATTTGGTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NQLLQAKVLKPTAFHLDCCSLSY*SNIWFP Trigger: AGGAAACCAAATGTTGGAGCAGTATGACAAGCTACA...ACAGTCAAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTCAAGTCTGCGGGACCACAGTAATGCTAGTTTCCTGGGACTGAGACCTTTCCACCTGGACCACTaGTTTTCTTTATCTGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFSSLRDHSNASFLGLRPFHLDH*FSLSVK Trigger: TTTAACAGATAAAGAAAAGCAGTGGTCCAGGTGGAA...AGGTCTCAGTCCCAGGAAACTAGCATTACTGTGGTCCCGCAGACTTGAAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159917.8 |
||
| CDS-3UTR CCA 90 bp | CGCTGCATAAACTGTGCAAAGACACGACCGCTTACACAGAATGTTAGATGCAGAGCACTGATTGTTGCCTaGAAACCTATTGATTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RCINCAKTRPLTQNVRCRALIVA*KPIDCG Trigger: TCCACAATCAATAGGTTTCCAGGCAACAATCAGTGC...TCTGCATCTAACATTCTGTGTAAGCGGTCGTGTCTTTGCACAGTTTATGCAGCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | TTATTTGGCAAAGCAGCGCTGCATAAACTGTGCAAAGACACGACCGCTTACACAGCACTGATTGTTGCCTaGAAACCTATTGATTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFGKAALHKLCKDTTAYTALIVA*KPIDCG Trigger: TCCACAATCAATAGGTTTCCAGGCAACAATCAGTGC...TGTGTAAGCGGTCGTGTCTTTGCACAGTTTATGCAGCGCTGCTTTGCCAAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
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| CDS-3UTR CCA 90 bp | CTGCGAGTCAAACTGACCATGCAACACTTGTCACTCTTTAATGCCATGAGTTTCGCACCTTCATGCAGCTaGTCAAACAGAAGTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRVKLTMQHLSLFNAMSFAPSCS*SNRSSS Trigger: ACTAGAACTTCTGTTTGACCAGCTGCATGAAGGTGC...GAAACTCATGGCATTAAAGAGTGACAAGTGTTGCATGGTCAGTTTGACTCGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| 3UTR CAA 72 bp | ACTCGCCCCGAGGACAGGAGCATTGGGTCATCCTTTTaGACATTAGTTATTGAGTCATCTACTAGTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TRPEDRSIGSSF*TLVIESSTSSL Trigger: TAAAGAACTAGTAGATGACTCAATAACTAATGTCAAAAAGGATGACCCAATGCTCCTGTCCTCGGGGCGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161123.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCTACCAAAGAAGCTAAACTTGTGAATGTGGTGTTATCTGATGCACAAAATGCATATGAGGGGCACTaGTTGTTGCCTGGAAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: LATKEAKLVNVVLSDAQNAYEGH*LLPGNL Trigger: TAGGTTTCCAGGCAACAATCAGTGCCCCTCATATGC...ATTTTGTGCATCAGATAACACCACATTCACAAGTTTAGCTTCTTTGGTAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR GCA 90 bp | ACATTGGCTACCAAAGAAGCTAAACTTGTGAATGTGGTGTTATCTGATGCACAACATTTGGTTTCCTCCTaGAGGACCGACTGGCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TLATKEAKLVNVVLSDAQHLVSS*RTDWQY Trigger: ATATTGCCAGTCGGTCCTGCAGGAGGAAACCAAATG...TTGTGCATCAGATAACACCACATTCACAAGTTTAGCTTCTTTGGTAGCCAATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGTTTCATTTTGACACTGCCATCTTGTAGCTTGTCATACTGCTCCAACATTCGAGGACAGGAGCATTaGGTCATCCTTTTTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: RGFILTLPSCSLSYCSNIRGQEH*VILFDI Trigger: AATGTCAAAAAGGATGACCCAATGCTCCTGTCCTCG...AATGTTGGAGCAGTATGACAAGCTACAAGATGGCAGTGTCAAAATGAAACCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTCCACCAGGCTTTAACTGGTCTATTAACAACAAGTAAGTGCTATCCGATTATGTGGAGGTTAAACTaGATGCCTTCAGTGCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IFHQALTGLLTTSKCYPIMWRLN*MPSVLG Trigger: TCCCAGCACTGAAGGCATCCAGTTTAACCTCCACAT...AATCGGATAGCACTTACTTGTTGTTAATAGACCAGTTAAAGCCTGGTGGAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGCCTCCTAGCATTTTTAGAGAGAGGAAATTTACATCAAAATTTCCAATCGGCATATGAGGGGCACTaGTTGTTGCCTGGAAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: TSLLAFLERGNLHQNFQSAYEGH*LLPGNL Trigger: TAGGTTTCCAGGCAACAATCAGTGCCCCTCATATGC...CGATTGGAAATTTTGATGTAAATTTCCTCTCTCTAAAAATGCTAGGAGGCTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR GCA 90 bp | CTGCGAGTCAAACTGACCATGCAACACTTGTCACTCTTTAATGCCATGAGTTTCTTCCACCTGGACCACTaGTTTTCTTTATCTGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRVKLTMQHLSLFNAMSFFHLDH*FSLSVK Trigger: TTTAACAGATAAAGAAAAGCAGTGGTCCAGGTGGAA...GAAACTCATGGCATTAAAGAGTGACAAGTGTTGCATGGTCAGTTTGACTCGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR CCA 90 bp | AAATTTACATCAAAATTTCCAATCGGAACAGCTGAGTGTTTTTGGGACACCACCCGAGGACAGGAGCATTaGGTCATCCTTTTTGACATT | + |
|
Preference number: 4 (lower is better) Translates to: KFTSKFPIGTAECFWDTTRGQEH*VILFDI Trigger: AATGTCAAAAAGGATGACCCAATGCTCCTGTCCTCG...GGTGGTGTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGATGTAAATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| 3UTR CAA 72 bp | ACATTCTTCCTCATACTACATTCACCCAGTCACTCATaGAGCATTTACTACAGAGCTATTAAAAAGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TFFLILHSPSHS*SIYYRAIKKQA Trigger: GGCTTGCTTTTTAATAGCTCTGTAGTAAATGCTCAATGAGTGACTGGGTGAATGTAGTATGAGGAAGAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS CCA 90 bp | GTCTTGATGATTCCATTCTTGCGGAGGTTGTGGATTAGCTCCGAGTaGCTGGCGCCGCCGGATTTCCAGGCCATCGCGAAGCACACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VLMIPFLRRLWISSE*LAPPDFQAIAKHTR Trigger: CCGGGTGTGCTTCGCGATGGCCTGGAAATCCGGCGGCGCCAGCCACTCGGAGCTAATCCACAACCTCCGCAAGAATGGAATCATCAAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 ENSMUST00000163085.8 |
||
| CDS-3UTR CAA 90 bp | TTTTCAAGTCTGCGGGACCACAGTAATGCTAGTTTCCTGGGACTGAGACCTAAGCCATTCTTGCGGAGGTaGTGGATTAGCTCCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSSLRDHSNASFLGLRPKPFLRR*WISSEW Trigger: CCACTCGGAGCTAATCCACAACCTCCGCAAGAATGG...CTTAGGTCTCAGTCCCAGGAAACTAGCATTACTGTGGTCCCGCAGACTTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCATCTGGACCTAGCAGACCTGTGTCCTTCTAGATTCAAAGGCCACCAACTGCCATCTTGTAGCTaGTCATACTGCTCCAACATT | + |
|
Preference number: 5 (lower is better) Translates to: GQHLDLADLCPSRFKGHQLPSCS*SYCSNI Trigger: AATGTTGGAGCAGTATGACAAGCTACAAGATGGCAG...TTGGTGGCCTTTGAATCTAGAAGGACACAGGTCTGCTAGGTCCAGATGCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAAGCTGCGAGTCAAACTGACCATGCAACACTTGTCACTCTTTAATGCCCCATTCTTGCGGAGGTaGTGGATTAGCTCCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLKLRVKLTMQHLSLFNAPFLRR*WISSEW Trigger: CCACTCGGAGCTAATCCACAACCTCCGCAAGAATGG...GGCATTAAAGAGTGACAAGTGTTGCATGGTCAGTTTGACTCGCAGCTTTAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR CAA 90 bp | CACTCAAATCAGCTCTTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTATACTGCTCCAACATTaGGTTTCCTCCTGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: HSNQLLQAKVLKPTAFHLILLQH*VSSCRT Trigger: GGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTAT...AAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAAGAGCTGATTTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGGGTCACTGACAGGATTCCAAAGCAACAACCAGCAGCAAACCAAAGCTCTGCCATCTTGTAGCTaGTCATACTGCTCCAACATT | + |
|
Preference number: 5 (lower is better) Translates to: SRGSLTGFQSNNQQQTKALPSCS*SYCSNI Trigger: AATGTTGGAGCAGTATGACAAGCTACAAGATGGCAG...AGCTTTGGTTTGCTGCTGGTTGTTGCTTTGGAATCCTGTCAGTGACCCCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTGACTGTGTGGAGGAGTTGCCTGGAAACCTATaGATTGTGGAGAATCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LQAKVLKPTAFHLDCVEELPGNL*IVENPC Trigger: ACATGGATTCTCCACAATCAATAGGTTTCCAGGCAA...CTCCTCCACACAGTCAAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161428.8 ENSMUST00000163085.8 |
||
| CDS-3UTR CAA 90 bp | CAGCAGCTGATTGTATCTACGACATGCTATCCTATGACGCCACATCAAAGGCTTATACTGCTCCAACATTaGGTTTCCTCCTGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: QQLIVSTTCYPMTPHQRLILLQH*VSSCRT Trigger: GGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTAT...AAGCCTTTGATGTGGCGTCATAGGATAGCATGTCGTAGATACAATCAGCTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAGGCTAAGGTCTTAAAGCCCACAGCCTTTCACCTTGACTGTGTGGAGGAGATGAGAGGTTTCATTTaGACACTGCCATCTTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: LQAKVLKPTAFHLDCVEEMRGFI*TLPSCS Trigger: GCTACAAGATGGCAGTGTCAAAATGAAACCTCTCAT...CTCCTCCACACAGTCAAGGTGAAAGGCTGTGGGCTTTAAGACCTTAGCCTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR CAA 90 bp | ACATTGGCTACCAAAGAAGCTAAACTTGTGAATGTGGTGTTATCTGATGCACAACCATTCTTGCGGAGGTaGTGGATTAGCTCCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLATKEAKLVNVVLSDAQPFLRR*WISSEW Trigger: CCACTCGGAGCTAATCCACAACCTCCGCAAGAATGG...TTGTGCATCAGATAACACCACATTCACAAGTTTAGCTTCTTTGGTAGCCAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CAA 90 bp | TTCCTAAAGCTGCGAGTCAAACTGACCATGCAACACTTGTCACTCTTTAATGCCCTGCCATCTTGTAGCTaGTCATACTGCTCCAACATT | + |
|
Preference number: 5 (lower is better) Translates to: FLKLRVKLTMQHLSLFNALPSCS*SYCSNI Trigger: AATGTTGGAGCAGTATGACAAGCTACAAGATGGCAG...GGCATTAAAGAGTGACAAGTGTTGCATGGTCAGTTTGACTCGCAGCTTTAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163085.8 |
||
| CDS-3UTR CAA 90 bp | ATGATATTGAGCTACAAGCCTCCTAGCATTTTTAGAGAGAGGAAATTTACATCACCATTCTTGCGGAGGTaGTGGATTAGCTCCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MILSYKPPSIFRERKFTSPFLRR*WISSEW Trigger: CCACTCGGAGCTAATCCACAACCTCCGCAAGAATGG...TGATGTAAATTTCCTCTCTCTAAAAATGCTAGGAGGCTTGTAGCTCAATATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
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| CDS-3UTR CAA 90 bp | CTGGACCACTGCTTTTCTTTATCTGTTAAAGGCACGTATATCACCCCCATGAGATTGCCTGGAAACCTATaGATTGTGGAGAATCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LDHCFSLSVKGTYITPMRLPGNL*IVENPC Trigger: ACATGGATTCTCCACAATCAATAGGTTTCCAGGCAA...TCTCATGGGGGTGATATACGTGCCTTTAACAGATAAAGAAAAGCAGTGGTCCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161428.8 |
||
| CDS-3UTR CAA 90 bp | TTGACTTTACACATATTTCAAATGACCATGCATCCTGGACTCCAGGGGGTCACTTTGCCTGGAAACCTATaGATTGTGGAGAATCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LTLHIFQMTMHPGLQGVTLPGNL*IVENPC Trigger: ACATGGATTCTCCACAATCAATAGGTTTCCAGGCAA...AGTGACCCCCTGGAGTCCAGGATGCATGGTCATTTGAAATATGTGTAAAGTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
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| CDS-3UTR CAA 90 bp | GAGAGGAAATTTACATCAAAATTTCCAATCGGAACAGCTGAGTGTTTTTGGGACATACTGCTCCAACATTaGGTTTCCTCCTGCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: ERKFTSKFPIGTAECFWDILLQH*VSSCRT Trigger: GGTCCTGCAGGAGGAAACCAAATGTTGGAGCAGTAT...GTCCCAAAAACACTCAGCTGTTCCGATTGGAAATTTTGATGTAAATTTCCTCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CAA 90 bp | CATTCACCCAGTCACTCATTGAGCATTTACTACAGAGCTATTAAAAAGCAAGCCTTGCCTGGAAACCTATaGATTGTGGAGAATCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: HSPSHSLSIYYRAIKKQALPGNL*IVENPC Trigger: ACATGGATTCTCCACAATCAATAGGTTTCCAGGCAA...GGCTTGCTTTTTAATAGCTCTGTAGTAAATGCTCAATGAGTGACTGGGTGAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CAA 90 bp | ACATTGGCTACCAAAGAAGCTAAACTTGTGAATGTGGTGTTATCTGATGCACAAATGAGAGGTTTCATTTaGACACTGCCATCTTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLATKEAKLVNVVLSDAQMRGFI*TLPSCS Trigger: GCTACAAGATGGCAGTGTCAAAATGAAACCTCTCAT...TTGTGCATCAGATAACACCACATTCACAAGTTTAGCTTCTTTGGTAGCCAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CAA 90 bp | ACATTGGCTACCAAAGAAGCTAAACTTGTGAATGTGGTGTTATCTGATGCACAAAATACTTTATCTGTCTaGATGATTCCATTCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLATKEAKLVNVVLSDAQNTLSV*MIPFLR Trigger: CCGCAAGAATGGAATCATCAAGACAGATAAAGTATT...TTGTGCATCAGATAACACCACATTCACAAGTTTAGCTTCTTTGGTAGCCAATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 |
||
| CDS-3UTR CAA 90 bp | ATGATATTGAGCTACAAGCCTCCTAGCATTTTTAGAGAGAGGAAATTTACATCAATGAGAGGTTTCATTTaGACACTGCCATCTTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: MILSYKPPSIFRERKFTSMRGFI*TLPSCS Trigger: GCTACAAGATGGCAGTGTCAAAATGAAACCTCTCAT...TGATGTAAATTTCCTCTCTCTAAAAATGCTAGGAGGCTTGTAGCTCAATATCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS GCA 72 bp | CCCCGCTGGTGTCCCCGCTCGAGCGGCCGCTGTTACTaGCGTCGCTGCCACTGCCGCCAATGCGCGCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: PRWCPRSSGRCY*RRCHCRQCALP Trigger: CGGGAGCGCGCATTGGCGGCAGTGGCAGCGACGGCAGTAACAGCGGCCGCTCGAGCGGGGACACCAGCGGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS CCA 72 bp | AGAGTGAGACCACCTCCCACACGGTCACCGCCCCGCTaGTGTCCCCGCTCGAGCGGCCGCTGTTACTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RVRPPPTRSPPR*CPRSSGRCYCR Trigger: ACGGCAGTAACAGCGGCCGCTCGAGCGGGGACACCAGCGGGGCGGTGACCGTGTGGGAGGTGGTCTCACTCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159917.8 ENSMUST00000162606.8 |
||
| CDS CCA 72 bp | CATTCTTGCGGAGGTTGTGGATTAGCTCCGAGTGGCTaGCGCCGCCGGATTTCCAGGCCATCGCGAAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: HSCGGCGLAPSG*RRRISRPSRST Trigger: TGTGCTTCGCGATGGCCTGGAAATCCGGCGGCGCCAGCCACTCGGAGCTAATCCACAACCTCCGCAAGAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 ENSMUST00000163085.8 |
||
| CDS CCA 72 bp | ATTCCATTCTTGCGGAGGTTGTGGATTAGCTCCGAGTaGCTGGCGCCGCCGGATTTCCAGGCCATCGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IPFLRRLWISSE*LAPPDFQAIAK Trigger: CTTCGCGATGGCCTGGAAATCCGGCGGCGCCAGCCACTCGGAGCTAATCCACAACCTCCGCAAGAATGGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 ENSMUST00000163085.8 |
||
| CDS CCA 72 bp | TTATCTGTCTTGATGATTCCATTCTTGCGGAGGTTGTaGATTAGCTCCGAGTGGCTGGCGCCGCCGGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSVLMIPFLRRL*ISSEWLAPPDF Trigger: GAAATCCGGCGGCGCCAGCCACTCGGAGCTAATCCACAACCTCCGCAAGAATGGAATCATCAAGACAGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000159917.8 ENSMUST00000161123.8 ENSMUST00000162606.8 ENSMUST00000163085.8 |
||
| CDS TCA 72 bp | GAAGTTCTAGTGCATATGCGTGCATATGAGGGGCACTaGTTGTTGCCTGGAAACCTATTGATTGTGGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: EVLVHMRAYEGH*LLPGNLLIVEN Trigger: ATTCTCCACAATCAATAGGTTTCCAGGCAACAATCAGTGCCCCTCATATGCACGCATATGCACTAGAACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000159917.8 ENSMUST00000161428.8 ENSMUST00000162606.8 ENSMUST00000162682.8 ENSMUST00000163085.8 |
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