RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PCLO (Mus musculus)

Ensembl gene IDs: ENSMUSG00000061601

Ensembl transcript IDs: ENSMUST00000030691.17, ENSMUST00000182407.8, ENSMUST00000182915.2

Found 1844 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATaGGGAGGACGCCTGCTATGCTGTGCCTGTGCTGCTTCCTGGCAT +
Preference number: 1 (lower is better)
Translates to: CHWLVEADYQTEFFE*GGRLLCCACAASWH
Trigger: ATGCCAGGAAGCAGCACAGGCACAGCATAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 90 bp TTTGAATGGGGAGGACGCCTGCTATGCTGTGCCTGTGCTGCTTCCTaGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCAGTGT +
Preference number: 1 (lower is better)
Translates to: FEWGGRLLCCACAAS*HDYTDRFYVLLWQC
Trigger: ACACTGCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGGCACAGCATAGCAGGCGTCCTCCCCATTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 90 bp TCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTaGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCA +
Preference number: 1 (lower is better)
Translates to: SGLTGPSDITFLRAS*LWSWLPLAGGGRLS
Trigger: TGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 90 bp GTGCCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTaGTGCTGTGGCAGTGTGGGTGAAATGGAAACCCAGAGTGTATCC +
Preference number: 1 (lower is better)
Translates to: VPVLLPGMITLTAFM*CCGSVGEMETQSVS
Trigger: GGATACACTCTGGGTTTCCATTTCACCCACACTGCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 90 bp TGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTaGTATGCTGTGCCTGTGCTGCTTCCTGGCATGATTACACTGACC +
Preference number: 1 (lower is better)
Translates to: WRQIIRLSSLNGEDA*YAVPVLLPGMITLT
Trigger: GGTCAGTGTAATCATGCCAGGAAGCAGCACAGGCACAGCATAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR TCA 90 bp GGGATGAGAGCTTTAAATTTGGGGGCACGTTCTTGCTGTGTGCTTTaGACAGGGCCTTTCTGCTCACCTCCTTCTGGTTTGACTGGTCCA +
Preference number: 1 (lower is better)
Translates to: GMRALNLGARSCCVL*TGPFCSPPSGLTGP
Trigger: TGGACCAGTCAAACCAGAAGGAGGTGAGCAGAAAGGCCCTGTTCAAAGCACACAGCAAGAACGTGCCCCCAAATTTAAAGCTCTCATCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTaGTGTGGCAGTGTGGGTGAAATGGAAACCCAGAGTGTATCCTCA +
Preference number: 1 (lower is better)
Translates to: PVLLPGMITLTAFMC*CGSVGEMETQSVSS
Trigger: TGAGGATACACTCTGGGTTTCCATTTCACCCACACTGCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 90 bp GCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATaGTGTGCCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTT +
Preference number: 1 (lower is better)
Translates to: ADYQTEFFEWGGRLL*CACAASWHDYTDRF
Trigger: AAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGGCACAGCATAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR TCA 90 bp CACTGCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATaGGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAG +
Preference number: 1 (lower is better)
Translates to: HCFACKLHGHGYQIL*ARLDGWWKQRRNSQ
Trigger: CTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 90 bp CTGCAAACTTGGCACACTGGCAGCATCTTTGTTTCTCAAGGGGAATaGTGGCGCATGATCACAAGCTCCAACAATGACTTCCTTGATTGG +
Preference number: 1 (lower is better)
Translates to: LQTWHTGSIFVSQGE*WRMITSSNNDFLDW
Trigger: CCAATCAAGGAAGTCATTGTTGGAGCTTGTGATCATGCGCCAGCATTCCCCTTGAGAAACAAAGATGCTGCCAGTGTGCCAAGTTTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 90 bp TCTAGTTACAACCTAGGAGTTTCGTCAGCTGCAAACTTGGCACACTaGCAGCATCTTTGTTTCTCAAGGGGAATGCTGGCGCATGATCAC +
Preference number: 1 (lower is better)
Translates to: SSYNLGVSSAANLAH*QHLCFSRGMLAHDH
Trigger: GTGATCATGCGCCAGCATTCCCCTTGAGAAACAAAGATGCTGCCAGTGTGCCAAGTTTGCAGCTGACGAAACTCCTAGGTTGTAACTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR TCA 90 bp GGCACACTGGCAGCATCTTTGTTTCTCAAGGGGAATGCTGGCGCATaGTCACAAGCTCCAACAATGACTTCCTTGATTGGTCTGATTGAT +
Preference number: 1 (lower is better)
Translates to: GTLAASLFLKGNAGA*SQAPTMTSLIGLID
Trigger: ATCAATCAGACCAATCAAGGAAGTCATTGTTGGAGCTTGTGATCATGCGCCAGCATTCCCCTTGAGAAACAAAGATGCTGCCAGTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 90 bp CAAACTTGGCACACTGGCAGCATCTTTGTTTCTCAAGGGGAATGCTaGCGCATGATCACAAGCTCCAACAATGACTTCCTTGATTGGTCT +
Preference number: 1 (lower is better)
Translates to: QTWHTGSIFVSQGEC*RMITSSNNDFLDWS
Trigger: AGACCAATCAAGGAAGTCATTGTTGGAGCTTGTGATCATGCGCCAGCATTCCCCTTGAGAAACAAAGATGCTGCCAGTGTGCCAAGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 90 bp CCCTCCATTGTGCTGAGTTATAGGCTTCTCCAAGCATTTGTCTGCTaGAAACATCCATGGAAAGCACCAGCAGATCGAGTAGTCTCTAAA +
Preference number: 1 (lower is better)
Translates to: PSIVLSYRLLQAFVC*KHPWKAPADRVVSK
Trigger: TTTAGAGACTACTCGATCTGCTGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACTCAGCACAATGGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 90 bp CCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTaGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTATTGCA +
Preference number: 1 (lower is better)
Translates to: PANFTDTATKYYEPG*MDGGNKGETASFIA
Trigger: TGCAATAAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 90 bp CAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGATaGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTATTGCAGTCT +
Preference number: 1 (lower is better)
Translates to: QTSRTRLPNTMSQVG*MVETKEKQPVLLQS
Trigger: AGACTGCAATAAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR TCA 90 bp AATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTaGACTTTTAAAGTCTCTTTGTATCCCACAGTCATGCCATCCACT +
Preference number: 1 (lower is better)
Translates to: NPVSLAYFHRFAFNM*TFKVSLYPTVMPST
Trigger: AGTGGATGGCATGACTGTGGGATACAAAGAGACTTTAAAAGTTCACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 90 bp CTGAGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATaGAAAGCACCAGCAGATCGAGTAGTCTCTAAAACTAAAATGGTA +
Preference number: 1 (lower is better)
Translates to: LSYRLLQAFVCWKHP*KAPADRVVSKTKMV
Trigger: TACCATTTTAGTTTTAGAGACTACTCGATCTGCTGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR TCA 90 bp AAAATGACACACTATCTCCATGACCTGGCCGACGCCTCTTGGAATTaGCAATGTGCCTGTAGCCAGGTTTTTATAGAATTATATCAGAAA +
Preference number: 1 (lower is better)
Translates to: KMTHYLHDLADASWN*QCACSQVFIELYQK
Trigger: TTTCTGATATAATTCTATAAAAACCTGGCTACAGGCACATTGTCAATTCCAAGAGGCGTCGGCCAGGTCATGGAGATAGTGTGTCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR TCA 90 bp ACAGATGTGTTATTAGCACACACATTAATCAGTATTGGGAGCACCTaGGCACATCACGAAACAGATATACGGACACAGTCGAATGATAAT +
Preference number: 1 (lower is better)
Translates to: TDVLLAHTLISIGST*AHHETDIRTQSNDN
Trigger: ATTATCATTCGACTGTGTCCGTATATCTGTTTCGTGATGTGCTCAGGTGCTCCCAATACTGATTAATGTGTGTGCTAATAACACATCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR GCA 90 bp AACCCAGAGTGTATCCTCAGATGGAACCAGCTTAAATGTTATTCATaGAAACAGAAGTGTGCTTTTGCTCTCTTTAAACTGTGTTGTCAG +
Preference number: 1 (lower is better)
Translates to: NPECILRWNQLKCYS*KQKCAFALFKLCCQ
Trigger: CTGACAACACAGTTTAAAGAGAGCAAAAGCACACTTCTGTTTGCATGAATAACATTTAAGCTGGTTCCATCTGAGGATACACTCTGGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 90 bp ACCATTTTAAACAGATGTGTTATTAGCACACACATTAATCAGTATTaGGAGCACCTGAGCACATCACGAAACAGATATACGGACACAGTC +
Preference number: 1 (lower is better)
Translates to: TILNRCVISTHINQY*EHLSTSRNRYTDTV
Trigger: GACTGTGTCCGTATATCTGTTTCGTGATGTGCTCAGGTGCTCCCAATACTGATTAATGTGTGTGCTAATAACACATCTGTTTAAAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 90 bp GTAAACTTCTGTACAAAGTGTGATCTAACAGAGTGGACCAGACAATaGTCCTCACTGAGATTACATTGCCTTAAAACATCAGCGAATATG +
Preference number: 1 (lower is better)
Translates to: VNFCTKCDLTEWTRQ*SSLRLHCLKTSANM
Trigger: CATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGAGGACCATTGTCTGGTCCACTCTGTTAGATCACACTTTGTACAGAAGTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 90 bp TCTTCACTCTTCACTATTGTAAATTACAGCAAAACTGATGTGCTTTaGCACGTAGAATTCAGACCTACTGTTGTACAGCTTTCTAACACA +
Preference number: 1 (lower is better)
Translates to: SSLFTIVNYSKTDVL*HVEFRPTVVQLSNT
Trigger: TGTGTTAGAAAGCTGTACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATTTACAATAGTGAAGAGTGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGAGGACGCCTGCTATaGTGTGCCTGTGCTGCTTCC +
Preference number: 2 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGGRLL*CACAAS
Trigger: GGAAGCAGCACAGGCACAGCATAGCAGGCGTCCTCC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGACGCCTCTTGGAATTaGCAATGTGCCTGTAGCCAG +
Preference number: 2 (lower is better)
Translates to: SPPSGLTGPSDITFLRASDASWN*QCACSQ
Trigger: CTGGCTACAGGCACATTGTCAATTCCAAGAGGCGTC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTaGTTGCCATTGGCTGGTGGA +
Preference number: 2 (lower is better)
Translates to: CSPPSGLTGPSDITFLRASWLWS*LPLAGG
Trigger: TCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CAA 90 bp TTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTaGAATGGGGAGGACGCCTGCTATGCTGTGCCTGTGCTGCTTCCT +
Preference number: 2 (lower is better)
Translates to: LVAIGWWRQIIRLSS*NGEDACYAVPVLLP
Trigger: AGGAAGCAGCACAGGCACAGCATAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGCTACCAAATACTATaGGCCAGGTTGGATGGATGG +
Preference number: 2 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGYQIL*ARLDGW
Trigger: CCATCCATCCAACCTGGCTCATAGTATTTGGTAGCC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCCACATGCACAGCACTaGAGGGGATTAAAACTGGCT +
Preference number: 2 (lower is better)
Translates to: SPPSGLTGPSDITFLRASPHAQH*RGLKLA
Trigger: AGCCAGTTTTAATCCCCTTCAGTGCTGTGCATGTGG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGTCTTGGTTGCCATTaGCTGGTGGAGGCAGATTAT +
Preference number: 2 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGLGCH*LVEADY
Trigger: ATAATCTGCCTCCACCAGCCAATGGCAACCAAGACC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCACACAACACTGCTTTaGCTGCAAACTTCACGGACA +
Preference number: 2 (lower is better)
Translates to: SDITFLRASWLWSWLPLAHTTLL*LQTSRT
Trigger: TGTCCGTGAAGTTTGCAGGCAAAGCAGTGTTGTGTG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGCAGTGTGGGTGAAATaGAAACCCAGAGTGTATCCT +
Preference number: 2 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAAVWVK*KPRVYP
Trigger: AGGATACACTCTGGGTTTCCATTTCACCCACACTGC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CAA 90 bp AGGGATGAGAGCTTTAAATTTGGGGGCACGTTCTTGCTGTGTGCTTaGAACAGGGCCTTTCTGCTCACCTCCTTCTGGTTTGACTGGTCC +
Preference number: 2 (lower is better)
Translates to: RDESFKFGGTFLLCA*NRAFLLTSFWFDWS
Trigger: GGACCAGTCAAACCAGAAGGAGGTGAGCAGAAAGGCCCTGTTCAAAGCACACAGCAAGAACGTGCCCCCAAATTTAAAGCTCTCATCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTGTCAGATGCCAAAATaGTACCACATGCACAGCACT +
Preference number: 2 (lower is better)
Translates to: SDITFLRASWLWSWLPLACQMPK*YHMHST
Trigger: AGTGCTGTGCATGTGGTATCATTTTGGCATCTGACA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCTTCTGTACAAAGTGTaGTCTAACAGAGTGGACCAG +
Preference number: 2 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLLYKV*SNRVDQ
Trigger: CTGGTCCACTCTGTTAGATCACACTTTGTACAGAAG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGCAGTGTGGGTGAAATaGAAACCCAGAGTGTATCCT +
Preference number: 2 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLAVWVK*KPRVYP
Trigger: AGGATACACTCTGGGTTTCCATTTCACCCACACTGC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAACTGTGTTGTCAGATaGCAAAATGATACCACATGC +
Preference number: 2 (lower is better)
Translates to: CSPPSGLTGPSDITFLRANCVVR*QNDTTC
Trigger: GCATGTGGTATCATTTTGGCATCTGACAACACAGTT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGGAGGGACCAAAAGATaGAGGGAAGAGAGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSGGTKR*REESGG
Trigger: ACCACCACTCTCTTCCCTCCATCTTTTGGTCCCTCC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CAA 90 bp TCTCTAAGTATTAGGGATGAGAGCTTTAAATTTGGGGGCACGTTCTaGCTGTGTGCTTTGAACAGGGCCTTTCTGCTCACCTCCTTCTGG +
Preference number: 2 (lower is better)
Translates to: SLSIRDESFKFGGTF*LCALNRAFLLTSFW
Trigger: CCAGAAGGAGGTGAGCAGAAAGGCCCTGTTCAAAGCACACAGCAAGAACGTGCCCCCAAATTTAAAGCTCTCATCCCTAATACTTAGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCACTGTCTTCCCATGCTaGTGCTCACCAATGCTTTGC +
Preference number: 2 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSTVFPC*CSPMLC
Trigger: GCAAAGCATTGGTGAGCATCAGCATGGGAAGACAGT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGTCTCACTAAGCATCTaGTCAAATGTTGAATGTTTC +
Preference number: 2 (lower is better)
Translates to: SPPSGLTGPSDITFLRASVSLSI*SNVECF
Trigger: GAAACATTCAACATTTGAGCAGATGCTTAGTGAGAC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTTCAGGAGAAACACATaGAAAGCTCCTTTTTGCACG +
Preference number: 2 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSFRRNT*KAPFCT
Trigger: CGTGCAAAAAGGAGCTTTCCATGTGTTTCTCCTGAA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGAGGAAGGCAACAGATaGACATTAAGCTGCCATGCT +
Preference number: 2 (lower is better)
Translates to: YYEPGWMDGGNKGETASFEEGNR*TLSCHA
Trigger: AGCATGGCAGCTTAATGTTCATCTGTTGCCTTCCTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACGGACATCACCTTCCTaGGGGCTAGCTGGCTTTGGT +
Preference number: 2 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLRTSPS*GLAGFG
Trigger: ACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATGTATCCCACAGTCATaGCATCCACTTGCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPCIPQS*HPLASW
Trigger: CCAAGAAGCAAGTGGATGGCATGACTGTGGGATACA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGTGTTACTTTCTTTATaGGCATTGGCGGTTGATGGG +
Preference number: 2 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSVLLSL*ALAVDG
Trigger: CCCATCAACCGCCAATGCCCATAAAGAAAGTAACAC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAATGGGGAGGACGCCTaGTATGCTGTGCCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWNGEDA*YAVPVL
Trigger: CAGCACAGGCACAGCATAGCAGGCGTCCTCCCCATT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCAAGCATTTGTCTGCTaGAAACATCCATGGAAAGCA +
Preference number: 2 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSQAFVC*KHPWKA
Trigger: TGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGGTAGGGTTTGGGAATaGGGTTATAACCATGTACTT +
Preference number: 2 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPGRVWE*GYNHVL
Trigger: AAGTACATGGTTATAACCCCATTCCCAAACCCTACC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGACGCCTCTTGGAATTaGCAATGTGCCTGTAGCCAG +
Preference number: 2 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWDASWN*QCACSQ
Trigger: CTGGCTACAGGCACATTGTCAATTCCAAGAGGCGTC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAGGGCTAGCTGGCTTTaGTCTTGGTTGCCATTGGCT +
Preference number: 2 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWRASWL*SWLPLA
Trigger: AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTCTCTTCACAGCTATaGGCAATCCAGTGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQFSSQL*AIQCLW
Trigger: CCAGAGACACTGGATTGCTCATAGCTGTGAAGAGAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGTCATGCCATCCACTTaGTTCTTGGTTTTGACCTCA +
Preference number: 2 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVVMPST*FLVLTS
Trigger: TGAGGTCAAAACCAAGAAGCAAGTGGATGGCATGAC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTCTGACAGTACATTATaGAAGAGAAAGGAAATAAGC +
Preference number: 2 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSSDSTL*KRKEIS
Trigger: GCTTATTTCCTTTCTCTTGCATAATGTACTGTCAGA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACACGTTCTTGCTGTGTaGTTTGAACAGGGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLHVLAV*FEQGLS
Trigger: AGAAAGGCCCTGTTCAAAGCACACAGCAAGAACGTG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAATGAGCCAGGTTGGATaGATGGTGGAAACAAAGGAG +
Preference number: 2 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKMSQVG*MVETKE
Trigger: CTCCTTTGTTTCCACCATCCATCCAACCTGGCTCAT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCACACAACACTGCTTTaGCTGCAAACTTCACGGACA +
Preference number: 2 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTHTTLL*LQTSRT
Trigger: TGTCCGTGAAGTTTGCAGGCAAAGCAGTGTTGTGTG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGCCAGGTTGGATGGATaGTGGAAACAAAGGAGAAAC +
Preference number: 2 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWARLDG*WKQRRN
Trigger: GTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGATGAGCCAGGTTGGATaGATGGTGGAAACAAAGGAG +
Preference number: 2 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTMSQVG*MVETKE
Trigger: CTCCTTTGTTTCCACCATCCATCCAACCTGGCTCAT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTGTCAGATGCCAAAATaGTACCACATGCACAGCACT +
Preference number: 2 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWCQMPK*YHMHST
Trigger: AGTGCTGTGCATGTGGTATCATTTTGGCATCTGACA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAAAGACACACAACACTaGTTTGCCTGCAAACTTCAC +
Preference number: 2 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLKDTQH*FACKLH
Trigger: GTGAAGTTTGCAGGCAAAGCAGTGTTGTGTGTCTTT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTGCCCGGCAAATATTaGCTTTTTACATTCCTTTCT +
Preference number: 2 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLPGKY*LFTFLS
Trigger: AGAAAGGAATGTAAAAAGTCAATATTTGCCGGGCAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAATCTCATTGCTAACCTaGTGTAAATGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLISLLT*CKCVCV
Trigger: CACACACACACATTTACATCAGGTTAGCAATGAGAT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGACAATGGTCCTCACTaGGATTACATTGCCTTAAAA +
Preference number: 2 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKDNGPH*DYIALK
Trigger: TTTTAAGGCAATGTAATCTCAGTGAGGACCATTGTC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAAAGACACACAACACTaGTTTGCCTGCAAACTTCAC +
Preference number: 2 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWKDTQH*FACKLH
Trigger: GTGAAGTTTGCAGGCAAAGCAGTGTTGTGTGTCTTT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTACTATGAGCCAGGTTaGATGGATGGTGGAAACAAA +
Preference number: 2 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTYYEPG*MDGGNK
Trigger: TTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTTCAGGAGAAACACATaGAAAGCTCCTTTTTGCACG +
Preference number: 2 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWFRRNT*KAPFCT
Trigger: CGTGCAAAAAGGAGCTTTCCATGTGTTTCTCCTGAA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCTTGTTGTGTACAATTaGGAACACCTTGACTTGATG +
Preference number: 2 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLVVYN*EHLDLM
Trigger: CATCAAGTCAAGGTGTTCTCAATTGTACACAACAAG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAACTGTGTTGTCAGATaGCAAAATGATACCACATGC +
Preference number: 2 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWNCVVR*QNDTTC
Trigger: GCATGTGGTATCATTTTGGCATCTGACAACACAGTT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGTCTCACTAAGCATCTaGTCAAATGTTGAATGTTTC +
Preference number: 2 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTVSLSI*SNVECF
Trigger: GAAACATTCAACATTTGAGCAGATGCTTAGTGAGAC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 72 bp ACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTaGCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGC +
Preference number: 3 (lower is better)
Translates to: TGPSDITFLRAS*LWSWLPLAGGG
Trigger: GCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 72 bp CCATCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTaGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTA +
Preference number: 3 (lower is better)
Translates to: PSDITFLRASWL*SWLPLAGGGRL
Trigger: TAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 72 bp TGTAGACCAGGCTGGCCTCGAACTCAGAAATTTGCCTaGCTTTGCCTCCCAAGTGCTGGGATTAAAGGCGTG +
Preference number: 3 (lower is better)
Translates to: CRPGWPRTQKFA*LCLPSAGIKGV
Trigger: CACGCCTTTAATCCCAGCACTTGGGAGGCAAAGGCAGGCAAATTTCTGAGTTCGAGGCCAGCCTGGTCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 72 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATaGGGAGGACGCCTGCTATGCTGTGCCTGTGCTGCT +
Preference number: 3 (lower is better)
Translates to: LVEADYQTEFFE*GGRLLCCACAA
Trigger: AGCAGCACAGGCACAGCATAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 72 bp GACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTaGTTGCCATTGGCTGGTGGAGGCAGATTATCAGAC +
Preference number: 3 (lower is better)
Translates to: DITFLRASWLWS*LPLAGGGRLSD
Trigger: GTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 72 bp CAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATaGTGTGCCTGTGCTGCTTCCTGGCATGATTACACT +
Preference number: 3 (lower is better)
Translates to: QTEFFEWGGRLL*CACAASWHDYT
Trigger: AGTGTAATCATGCCAGGAAGCAGCACAGGCACAGCATAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR TCA 72 bp CCTTGGAGTACCAGTGCTGCGGAACAGAATCAGGGATaGACCAGAGCCTACTGTGAAAAGCAAATGGCAGAG +
Preference number: 3 (lower is better)
Translates to: PWSTSAAEQNQG*TRAYCEKQMAE
Trigger: CTCTGCCATTTGCTTTTCACAGTAGGCTCTGGTTCATCCCTGATTCTGTTCCGCAGCACTGGTACTCCAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR GCA 72 bp ATACAACCTTTCAGGGAACCCTTGGAGTACCAGTGCTaGGGAACAGAATCAGGGATGAACCAGAGCCTACTG +
Preference number: 3 (lower is better)
Translates to: IQPFREPLEYQC*GTESGMNQSLL
Trigger: CAGTAGGCTCTGGTTCATCCCTGATTCTGTTCCGCAGCACTGGTACTCCAAGGGTTCCCTGAAAGGTTGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR GCA 72 bp GCTATACAACCTTTCAGGGAACCCTTGGAGTACCAGTaGTGCGGAACAGAATCAGGGATGAACCAGAGCCTA +
Preference number: 3 (lower is better)
Translates to: AIQPFREPLEYQ*CGTESGMNQSL
Trigger: TAGGCTCTGGTTCATCCCTGATTCTGTTCCGCAGCACTGGTACTCCAAGGGTTCCCTGAAAGGTTGTATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 72 bp AACCTAGGAGTTTCGTCAGCTGCAAACTTGGCACACTaGCAGCATCTTTGTTTCTCAAGGGGAATGCTGGCG +
Preference number: 3 (lower is better)
Translates to: NLGVSSAANLAH*QHLCFSRGMLA
Trigger: CGCCAGCATTCCCCTTGAGAAACAAAGATGCTGCCAGTGTGCCAAGTTTGCAGCTGACGAAACTCCTAGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR GCA 72 bp TGGCACACTGGCAGCATCTTTGTTTCTCAAGGGGAATaGTGGCGCATGATCACAAGCTCCAACAATGACTTC +
Preference number: 3 (lower is better)
Translates to: WHTGSIFVSQGE*WRMITSSNNDF
Trigger: GAAGTCATTGTTGGAGCTTGTGATCATGCGCCAGCATTCCCCTTGAGAAACAAAGATGCTGCCAGTGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR GCA 72 bp CTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTaGTGTGGCAGTGTGGGTGAAATGGAAACCCAGAGT +
Preference number: 3 (lower is better)
Translates to: LPGMITLTAFMC*CGSVGEMETQS
Trigger: ACTCTGGGTTTCCATTTCACCCACACTGCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 72 bp ATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTaGTATGCTGTGCCTGTGCTGCTTCCTGGCATGATT +
Preference number: 3 (lower is better)
Translates to: IIRLSSLNGEDA*YAVPVLLPGMI
Trigger: AATCATGCCAGGAAGCAGCACAGGCACAGCATAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGAAATTTGCCTGCCTTaGCCTCCCAAGTGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSEICLP*PPKCWD
Trigger: ATCCCAGCACTTGGGAGGCAAAGGCAGGCAAATTTC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 72 bp CACACTGGCAGCATCTTTGTTTCTCAAGGGGAATGCTaGCGCATGATCACAAGCTCCAACAATGACTTCCTT +
Preference number: 3 (lower is better)
Translates to: HTGSIFVSQGEC*RMITSSNNDFL
Trigger: AAGGAAGTCATTGTTGGAGCTTGTGATCATGCGCCAGCATTCCCCTTGAGAAACAAAGATGCTGCCAGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 72 bp TTCACGGACACGGCTACCAAATACTATGAGCCAGGTTaGATGGATGGTGGAAACAAAGGAGAAACAGCCAGT +
Preference number: 3 (lower is better)
Translates to: FTDTATKYYEPG*MDGGNKGETAS
Trigger: ACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTCGAACTCAGAAATTaGCCTGCCTTTGCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLELRN*PAFASQ
Trigger: TTGGGAGGCAAAGGCAGGCAAATTTCTGAGTTCGAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR TCA 72 bp GCAGCATCTTTGTTTCTCAAGGGGAATGCTGGCGCATaGTCACAAGCTCCAACAATGACTTCCTTGATTGGT +
Preference number: 3 (lower is better)
Translates to: AASLFLKGNAGA*SQAPTMTSLIG
Trigger: ACCAATCAAGGAAGTCATTGTTGGAGCTTGTGATCATGCGCCAGCATTCCCCTTGAGAAACAAAGATGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 72 bp CGGACACGGCTACCAAATACTATGAGCCAGGTTGGATaGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTA +
Preference number: 3 (lower is better)
Translates to: RTRLPNTMSQVG*MVETKEKQPVL
Trigger: TAAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR TCA 72 bp CACTATCTCCATGACCTGGCCGACGCCTCTTGGAATTaGCAATGTGCCTGTAGCCAGGTTTTTATAGAATTA +
Preference number: 3 (lower is better)
Translates to: HYLHDLADASWN*QCACSQVFIEL
Trigger: TAATTCTATAAAAACCTGGCTACAGGCACATTGTCAATTCCAAGAGGCGTCGGCCAGGTCATGGAGATAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR GCA 72 bp ATTGTGCTGAGTTATAGGCTTCTCCAAGCATTTGTCTaGTGGAAACATCCATGGAAAGCACCAGCAGATCGA +
Preference number: 3 (lower is better)
Translates to: IVLSYRLLQAFV*WKHPWKAPADR
Trigger: TCGATCTGCTGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACTCAGCACAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 72 bp AGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATaGAAAGCACCAGCAGATCGAGTAGTCTCTAAAACT +
Preference number: 3 (lower is better)
Translates to: RLLQAFVCWKHP*KAPADRVVSKT
Trigger: AGTTTTAGAGACTACTCGATCTGCTGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACCATCCACTTGCTTCTaGGTTTTGACCTCATTTGCT +
Preference number: 3 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPPSTCF*VLTSFA
Trigger: AGCAAATGAGGTCAAAACCAAGAAGCAAGTGGATGG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR GCA 72 bp AGTGTGCTTTTGCTCTCTTTAAACTGTGTTGTCAGATaGCAAAATGATACCACATGCACAGCACTGAAGGGG +
Preference number: 3 (lower is better)
Translates to: SVLLLSLNCVVR*QNDTTCTALKG
Trigger: CCCCTTCAGTGCTGTGCATGTGGTATCATTTTGGCATCTGACAACACAGTTTAAAGAGAGCAAAAGCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 72 bp CTGATTGATCTAACCCCAATCGCCAGCTTTTTAGAATaGAAGGGAAGCGGTATTAGGAAGCCTTCCATTCTT +
Preference number: 3 (lower is better)
Translates to: LIDLTPIASFLE*KGSGIRKPSIL
Trigger: AAGAATGGAAGGCTTCCTAATACCGCTTCCCTTCCATTCTAAAAAGCTGGCGATTGGGGTTAGATCAATCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAATCAGACTGAGTTCTTaGAATGGGGAGGACGCCTGC +
Preference number: 3 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLIRLSS*NGEDAC
Trigger: GCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGAT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR TCA 72 bp TTATTAGCACACACATTAATCAGTATTGGGAGCACCTaGGCACATCACGAAACAGATATACGGACACAGTCG +
Preference number: 3 (lower is better)
Translates to: LLAHTLISIGST*AHHETDIRTQS
Trigger: CGACTGTGTCCGTATATCTGTTTCGTGATGTGCTCAGGTGCTCCCAATACTGATTAATGTGTGTGCTAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR GCA 72 bp AAAGTCTCTTTGTATCCCACAGTCATGCCATCCACTTaGTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGC +
Preference number: 3 (lower is better)
Translates to: KVSLYPTVMPST*FLVLTSFASES
Trigger: GCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCAAGTGGATGGCATGACTGTGGGATACAAAGAGACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR TCA 72 bp TCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTaGACTTTTAAAGTCTCTTTGTATCCCACAGTCATG +
Preference number: 3 (lower is better)
Translates to: SLAYFHRFAFNM*TFKVSLYPTVM
Trigger: CATGACTGTGGGATACAAAGAGACTTTAAAAGTTCACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR TCA 72 bp TTGACTGTTGGTCTCACTAAGCATCTGCTCAAATGTTaGATGTTTCCAAGTCCAAGTATCTCATTGCTAACC +
Preference number: 3 (lower is better)
Translates to: LTVGLTKHLLKC*MFPSPSISLLT
Trigger: GGTTAGCAATGAGATACTTGGACTTGGAAACATTCAACATTTGAGCAGATGCTTAGTGAGACCAACAGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 72 bp TTCCCACAATTTCTGTGTTACTTTCTTTATGGGCATTaGCGGTTGATGGGAAAGAGAATGCTTCATCTTGAT +
Preference number: 3 (lower is better)
Translates to: FPQFLCYFLYGH*RLMGKRMLHLD
Trigger: ATCAAGATGAAGCATTCTCTTTCCCATCAACCGCCAATGCCCATAAAGAAAGTAACACAGAAATTGTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CCA 72 bp TGTACAAAGTGTGATCTAACAGAGTGGACCAGACAATaGTCCTCACTGAGATTACATTGCCTTAAAACATCA +
Preference number: 3 (lower is better)
Translates to: CTKCDLTEWTRQ*SSLRLHCLKTS
Trigger: TGATGTTTTAAGGCAATGTAATCTCAGTGAGGACCATTGTCTGGTCCACTCTGTTAGATCACACTTTGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CCA 72 bp TTTGTAAACTTCTGTACAAAGTGTGATCTAACAGAGTaGACCAGACAATGGTCCTCACTGAGATTACATTGC +
Preference number: 3 (lower is better)
Translates to: FVNFCTKCDLTE*TRQWSSLRLHC
Trigger: GCAATGTAATCTCAGTGAGGACCATTGTCTGGTCCACTCTGTTAGATCACACTTTGTACAGAAGTTTACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGACTTGCTTCTTGGTTTaGACCTCATTTGCTTCTGAA +
Preference number: 3 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQTCFLV*TSFASE
Trigger: TTCAGAAGCAAATGAGGTCAAAACCAAGAAGCAAGT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGGTGTGTATAAGCAATaGCTTTCACACTACCTTTCA +
Preference number: 3 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQGVYKQ*LSHYLS
Trigger: TGAAAGGTAGTGTGAAAGCAATTGCTTATACACACC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR TCA 72 bp AATTTCTGTGTTACTTTCTTTATGGGCATTGGCGGTTaGTGGGAAAGAGAATGCTTCATCTTGATGATTCAT +
Preference number: 3 (lower is better)
Translates to: NFCVTFFMGIGG*WERECFILMIH
Trigger: ATGAATCATCAAGATGAAGCATTCTCTTTCCCATCAACCGCCAATGCCCATAAAGAAAGTAACACAGAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR GCA 72 bp TTCACTATTGTAAATTACAGCAAAACTGATGTGCTTTaGCACGTAGAATTCAGACCTACTGTTGTACAGCTT +
Preference number: 3 (lower is better)
Translates to: FTIVNYSKTDVL*HVEFRPTVVQL
Trigger: AAGCTGTACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATTTACAATAGTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR GCA 72 bp TCCCTGATGACTCAATGGACTAGTAGGGAAATGAAATaGTTCTCAAGGTTTGAGTGTTTCAAGATTACTTAT +
Preference number: 3 (lower is better)
Translates to: SLMTQWTSREMK*FSRFECFKITY
Trigger: ATAAGTAATCTTGAAACACTCAAACCTTGAGAAGCATTTCATTTCCCTACTAGTCCATTGAGTCATCAGGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAACAGAAGTGTGCTTTaGCTCTCTTTAAACTGTGTT +
Preference number: 3 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLNRSVL*LSLNCV
Trigger: AACACAGTTTAAAGAGAGCAAAAGCACACTTCTGTT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAACAGAAGTGTGCTTTaGCTCTCTTTAAACTGTGTT +
Preference number: 3 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWNRSVL*LSLNCV
Trigger: AACACAGTTTAAAGAGAGCAAAAGCACACTTCTGTT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCGGGGACGCTTCCCTTaGGCAGCCCCTGCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGRGRFP*AAPAPL
Trigger: CAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGGAGGGGCTTGCTTTaGTGGGGCAGCTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGRGLL*WGSWPS
Trigger: ACTGGGCCAGCTGCCCCATCAAAGCAAGCCCCTCCC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCAGCCCCTGCGCCCTTaGCATGACAGCAGCGATCTG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAQPLRP*HDSSDL
Trigger: CAGATCGCTGCTGTCATGTCAAGGGCGCAGGGGCTG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGCTGGAGTTGGGTGTTaGGGCTGGGGCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAAGVGC*GWGFAG
Trigger: CCCAGCAAAGCCCCAGCCTCAACACCCAACTCCAGC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGAAGGTGACCCTGGCTaGCCGGGGCTGGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAEGDPG*PGLGTE
Trigger: TTCTGTTCCCAGCCCCGGGCAGCCAGGGTCACCTTC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGCTATGGCCGCCCCTaGATCTTCCAGGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAGYGRP*IFQVGL
Trigger: CAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAGGCTGGGGCTTTGCTaGGGTGGGCTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASRLGLC*GGLLRL
Trigger: CAGCCTCAACAGCCCACCCCAGCAAAGCCCCAGCCT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCCTGCGCCCTTGACATaGCAGCAGCGATCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAPAPLT*QQRSVS
Trigger: GGAGACAGATCGCTGCTGTCATGTCAAGGGCGCAGG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGCTGGAGTTGGGTGTTaGGGCTGGGGCTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASAGVGC*GWGFAG
Trigger: TCCAGCAAAGCCCCAGCCTCAACACCCAACTCCAGC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGCTGGGGTGGGCTGTTaGGGCTGGGGCTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLAGVGC*GWGFAG
Trigger: TCCAGCAAAGCCCCAGCCTCAACAGCCCACCCCAGC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGACTTGGGTGGTCCCTaGGCAGCCAGAGTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLADLGGP*AARVWD
Trigger: ATCCCAGACTCTGGCTGCTCAGGGACCACCCAAGTC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCCCTTGGGCAGCCCCTaGGCCCTTGACATGACAGCA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGPLGSP*ALDMTA
Trigger: TGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGGGCCATGGGACCTGTaGCGAGCTTTGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWGPWDL*RALRCC
Trigger: GCAGCAGCGCAAAGCTCGGCACAGGTCCCATGGCCC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTTGTTTCCTGTGCATaGAGGGCGACTCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALVSCA*RATPQR
Trigger: CCGCTGCGGAGTCGCCCTCCATGCACAGGAAACAAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGCTGGCCCTGGTTGCTaGACTGTGGCCTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASAGPGC*TVAFAG
Trigger: ACCTGCAAAGGCCACAGTCCAGCAACCAGGGCCAGC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGCACGGGGGATGCTTTaGGTCCTGAGGATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAARGML*VLRMQV
Trigger: CACCTGCATCCTCAGGACCCAAAGCATCCCCCGTGC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTGTCCTGTCTTTGCTaGGCTCCCCTCGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALSCLC*APLGLP
Trigger: AGGAAGGCCGAGGGGAGCCCAGCAAAGACAGGACAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCTGCCGCCAGCTGCTTaGGATCCACGCCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLPPAA*DPRLET
Trigger: AGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTGCCGATGTGGGACCTaGGTGAGCATGAGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRACRCGT*VSMSPF
Trigger: AAAGGGGCTCATGCTCACTCAGGTCCCACATCGGCA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTGAGGCTGGGGCTTTaGTGGAATGGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASLRLGL*WNGLLR
Trigger: CCTCAGCAGCCCATTCCAGCAAAGCCCCAGCCTCAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACTGAGGCTGGGGCTTTaGTGGGGCTGGCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLLRLGL*WGWLLR
Trigger: CCTCAACAGCCAGCCCCAGCAAAGCCCCAGCCTCAG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCTGAGGCTGGGGCTTTaGTGGAGTTGGGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASLRLGL*WSWVLR
Trigger: CCTCAACACCCAACTCCAGCAAAGCCCCAGCCTCAG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTGTGCTGGCGCCTGTaGTGCAGAAGTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRALCWRL*CRSWWC
Trigger: GCACCACCAACTTCTGCAGCACAGGCGCCAGCACAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGGGTAGTTGCAGGCTaGTGTGCTGTGCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRARVVAG*CAVQLR
Trigger: ACGGAGCTGCACAGCACAGCAGCCTGCAACTACCCT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGACTTTCTGCAGCTCTaGCGCCAGCTGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASDFLQL*RQLLGI
Trigger: GATCCCAAGCAGCTGGCGGCAGAGCTGCAGAAAGTC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGGCTATGGCCGCCCCTaGATCTTCCAGGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLGYGRP*IFQVGL
Trigger: CAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCGGGGACGCTTCCCTTaGGCAGCCCCTGCGCCCTTG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVRGRFP*AAPAPL
Trigger: CAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCCAGCCTGTTGAGCTaGGGGCTTGGCTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWASLLS*GLGCHW
Trigger: CCAGTGACAGCCAAGCCCCCAGCTCAACAGGCTGGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAGGTTTTCCCAGGCCTaGCTGTTGAGGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASRFSQA*LLRLGL
Trigger: AAGCCCCAGCCTCAACAGCCAGGCCTGGGAAAACCT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCGGACCTGTGGACTTaGGTGGTCCCTGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWADLWT*VVPEQP
Trigger: TGGCTGCTCAGGGACCACCCAAGTCCACAGGTCCGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCATGGGTGCGGACCTGTaGACTTGGGTGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGMGADL*TWVVPE
Trigger: CTCAGGGACCACCCAAGTCCACAGGTCCGCACCCAT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGCTGGTTCTAAGGCGTaGCCTGGGGAAAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAAGSKA*PGESGE
Trigger: CTCACCACTTTCCCCAGGCCACGCCTTAGAACCAGC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCGCTCAATGCCGTGCTaGCTTTCTACTCGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASRSMPC*LSTRLG
Trigger: ACCCAGCCGAGTAGAAAGCCAGCACGGCATTGAGCG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCTGCCGCCAGCTGCTTaGGATCCACGCCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLPPAA*DPRLET
Trigger: AGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCCCCCAGATTCAAACTaGACCGTCTTGACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAPPDSN*TVLTAP
Trigger: CGGAGCAGTCAAGACGGTTCAGTTTGAATCTGGGGG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGCTGTTGGTGTTTTCTaGGGTGGGGGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGAVGVF*GGGSAG
Trigger: CCCTGCAGAACCCCCACCTCAGAAAACACCAACAGC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGGAGTTGGGGTAGGTTaGGCCTGGGGTGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWGVGVG*AWGVKD
Trigger: GTCCTTCACACCCCAGGCTCAACCTACCCCAACTCC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTGGGGACTGCTGGAGTaGGACTTTCTGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGWGLLE*DFLQLC
Trigger: GCAGAGCTGCAGAAAGTCTCACTCCAGCAGTCCCCA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCTGCTGGGAAGGTTTTaGTGTGCCAGGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLLGRF*CARGLW
Trigger: CCACAAGCCCCTGGCACAGCAAAACCTTCCCAGCAG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTTTAGAGAGGCCTTGTaGTGGCGCCTGTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAFREAL*WRLCCR
Trigger: TCTGCAGCACAGGCGCCAGCACAAGGCCTCTCTAAA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGCAGGTGCTGATGGGTaGGGACCTGTGGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLAGADG*GPVDLG
Trigger: ACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGGCCTGGTGTCTGGCTaGTGCTCTCCTTCACAAGCC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWGLVSG*CSPSQA
Trigger: GGCTTGTGAAGGAGAGCAGCAGCCAGACACCAGGCC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGGCCTTCCTTTGCAGTaGCTTCTGCCTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGGLPLQ*LLPEAV
Trigger: CACAGCCTCAGGCAGAAGGCACTGCAAAGGAAGGCC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTTTCTGTCCTGTCTTTaGTGGGCTCCCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAFLSCL*WAPLGL
Trigger: AAGGCCGAGGGGAGCCCAGCAAAGACAGGACAGAAA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTACCTGTGCCGAGCTTTaGGCTGCTGCTTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRATCAEL*AAACFL
Trigger: GAGAAAGCAAGCAGCAGCGCAAAGCTCGGCACAGGT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCGGCAAAGGTCCAGCTaGAGCCCTGGCCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWRQRSS*SPGHSH
Trigger: ATGGGAATGGCCAGGGCTGCAGCTGGACCTTTGCCG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGGGCTTGGCTGTCACTaGAGGTTGTGCTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGGLGCH*RLCWGL
Trigger: AAGTCCCCAGCACAACCTCCAGTGACAGCCAAGCCC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTTGTGGGCTGTGATTTaGGGGCATCAGCGATACCCC +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALWAVI*GHQRYP
Trigger: GGGGTATCGCTGATGCCCCCAAATCACAGCCCACAA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCACCTGTGGACTTGGGTaGTCCCTGAGCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGTCGLG*SLSSQS
Trigger: ACTCTGGCTGCTCAGGGACCACCCAAGTCCACAGGT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTAAGTCTGAGGGGCTaGAAGGGCTGCTTTCTTGCG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALSLRG*KGCFLA
Trigger: CGCAAGAAAGCAGCCCTTCCAGCCCCTCAGACTTAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGCGCAATTCTTCTGTaGGAGACGCATCCTCGATGG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGAILL*ETHPRW
Trigger: CCATCGAGGATGCGTCTCCCACAGAAGAATTGCGCC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGGATGGCTGTGGAGTTaGGGTAGGTTGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWGWLWS*GRLSLG
Trigger: CCCCAGGCTCAACCTACCCCAACTCCACAGCCATCC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGTGGCAACAGGTTGTTaGGGCTGGGGCTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWVATGC*GWGFAG
Trigger: TCCAGCAAAGCCCCAGCCTCAACAACCTGTTGCCAC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGCTGGGGTGGGCTGTTaGGGCTGGGGCTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSAGVGC*GWGFAG
Trigger: TCCAGCAAAGCCCCAGCCTCAACAGCCCACCCCAGC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAGAAGGTTGTTGAGCTaGAGGTTTTCCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASRRLLS*RFSQAW
Trigger: CCAGGCCTGGGAAAACCTTCAGCTCAACAACCTTCT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGCTCCTCCTTCTTCTaGACTGGATCCTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGSSFF*TGSLLS
Trigger: TGAGAGCAAGGATCCAGTTCAGAAGAAGGAGGAGCC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGGCTTCGGGGGCTGCTaGGACTGGGGTGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPGFGGC*DWGVAW
Trigger: CCAAGCCACACCCCAGTCTCAGCAGCCCCCGAAGCC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGGATGCTTTGGGTCCTaGGGATGCAGGTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASGCFGS*GCRWHF
Trigger: AAAATGCCACCTGCATCCTCAGGACCCAAAGCATCC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGCAGTGCCTTCTGCCTaGGGCTGTGTTACGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLAVPSA*GCVTSL
Trigger: CAGAGACGTAACACAGCCTCAGGCAGAAGGCACTGC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTCTTCCCCCGAGCCTTaGCTGTCTTCCTGCTTATAC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRASSPEP*LSSCLY
Trigger: GTATAAGCAGGAAGACAGTCAAGGCTCGGGGGAAGA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTGTTCCTCAAGCTGCTaGTGGAGCTGTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRACSSSC*WSCCCS
Trigger: GCTGCAACAACAGCTCCATCAGCAGCTTGAGGAACA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGTTGAGCCTGGGGTGTaGAGGACATGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSVEPGV*RTWWPQ
Trigger: CTGTGGCCACCATGTCCTTCACACCCCAGGCTCAAC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCTGAGGGGTCTAGAGTaGACCAGTCTTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRALRGLE*TSLSGS
Trigger: ACTGCCAGAAAGACTGGTTCACTCTAGACCCCTCAG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTGAGGGGTCTAGAGTaGACCAGTCTTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALRGLE*TSLSGS
Trigger: ACTGCCAGAAAGACTGGTTCACTCTAGACCCCTCAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCCCAGGTACCTTAGCTaGAGTCTGTGGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSPRYLS*SLWARL
Trigger: CAGCCTGGCCCACAGACTGCAGCTAAGGTACCTGGG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTTGAGGCTGGGGCTTTaGTGGAGTTGGGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLRLGL*WSWVLR
Trigger: CCTCAACACCCAACTCCAGCAAAGCCCCAGCCTCAA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAAGTGGTGGCGCTTCTaGAGCAGGTGGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASKWWRF*SRWLLF
Trigger: GAAAAGAAGCCACCTGCTGCAGAAGCGCCACCACTT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCCAGTGAAGCCACTTTaGCTATGGGTCCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASPVKPL*LWVLLR
Trigger: CCGAAGAAGGACCCATAGGCAAAGTGGCTTCACTGG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCTCTTCCTCTGCTGCTaGTCCAGTTCTCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRALFLCC*SSSLCF
Trigger: GAAGCAGAGAGAACTGGAGCAGCAGCAGAGGAAGAG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTATGACCAGTGGGGACTaGTGGAGTGAGACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAMTSGD*WSETFC
Trigger: GCAGAAAGTCTCACTCCAGCAGTCCCCACTGGTCAT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGGGCGACACTGGTTTTaGTTTGACTGCGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASGRHWF*FDCEMV
Trigger: GACCATCTCGCAGTCAAAGCAAAACCAGTGTCGCCC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGGCGACACTGGTTTTaGTTTGACTGCGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGRHWF*FDCEMV
Trigger: GACCATCTCGCAGTCAAAGCAAAACCAGTGTCGCCC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTACCAGGCTGCTGAGCTaGTGTTTTTCCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLATRLLS*CFSRSR
Trigger: TCTGGACCTGGAAAAACACCAGCTCAGCAGCCTGGT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAGGCCGGTTTGGGTTTaGTGGTCTTGTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASRPVWV*WSCLAS
Trigger: AGAAGCCAGACAAGACCACCAAACCCAAACCGGCCT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCGCGTGGGCAGCTGTTaGTGTTTTCTGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSRVGSC*CFLRWG
Trigger: CCCCCACCTCAGAAAACACCAACAGCTGCCCACGCG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTTCAGGCCTGGTGTCTaGCTGCTGCTCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGFRPGV*LLLSFT
Trigger: TGTGAAGGAGAGCAGCAGCCAGACACCAGGCCTGAA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGGTAAAAGAGGGCCATaGGACCTGTGCCGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGGKRGP*DLCRAL
Trigger: CAAAGCTCGGCACAGGTCCCATGGCCCTCTTTTACC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTACTGGGTGGCGTCTTTaGTCTTTCTCTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLATGWRL*SFSPPL
Trigger: CAGAGGAGGAGAGAAAGACCAAAGACGCCACCCAGT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTTGAGAAGAAGGTGTTaGGGCCAACCCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALRRRC*GQPSLR
Trigger: CCTGAGACTGGGTTGGCCCCAACACCTTCTTCTCAA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTGGTGGCATCTTCAGTaGCCCAAAACTGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAWWHLQ*PKTDCP
Trigger: AGGGCAGTCAGTTTTGGGCCACTGAAGATGCCACCA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGCGTTTCTTGTCTTTaGGTGGAGATGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAGVSCL*VEMWHP
Trigger: TGGGTGCCACATCTCCACCCAAAGACAAGAAACGCC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCTGAGGAGCTGTTCTTaGCCGCTCAATGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLRSCS*PLNAVL
Trigger: CAGCACGGCATTGAGCGGCCAAGAACAGCTCCTCAG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGCCATTCCCATTGGCTaGCCAACAGGACTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASAIPIG*PTGLSG
Trigger: TCCACTAAGTCCTGTTGGCCAGCCAATGGGAATGGC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTGGATCCTGCCGATGTaGGACCTGAGTGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGWILPM*DLSEHE
Trigger: CTCATGCTCACTCAGGTCCCACATCGGCAGGATCCA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACCTGCATCTTCCAGGTaGGTCTGGGCGACACTGGTT +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLPASSR*VWATLV
Trigger: AACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCTTCAGCTGCGGCTATaGCCGCCCCTGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSLQLRL*PPLHLP
Trigger: TGGAAGATGCAGGGGCGGCCATAGCCGCAGCTGAAG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAAGATGGGCTATCTGTaGGTGTCTCTGTCGTCTTCG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAKMGYL*VSLSSS
Trigger: CGAAGACGACAGAGACACTCACAGATAGCCCATCTT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTTCATCCTCAGAGCCTaGAGCATCCTCATCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGFILRA*SILISA
Trigger: AGCGCTGATGAGGATGCTTCAGGCTCTGAGGATGAA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGTCACACCGTCAGACTaGACCGTGTACCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWVTPSD*TVYHPW
Trigger: CCAAGGATGGTACACGGTTCAGTCTGACGGTGTGAC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTGGGTCTGGTACTGCTaGCCTCACTGTCAGACATAT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASWVWYC*PHCQTY
Trigger: ATATGTCTGACAGTGAGGTCAGCAGTACCAGACCCA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATGGCTGAATTCAGTCTaGGGAGCTGTTCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLWLNSV*GAVLGR
Trigger: GCGGCCAAGAACAGCTCCTCAGACTGAATTCAGCCA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGAGAGACCAGCAAGGTaGTCTAAGCTCTCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLERPAR*SKLSVP
Trigger: GGGCACAGAGAGCTTAGATCACCTTGCTGGTCTCTC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTGCCGATGTGGGACCTaGGTGAGCATGAGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSCRCGT*VSMSPF
Trigger: AAAGGGGCTCATGCTCACTCAGGTCCCACATCGGCA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCATTCTGGACAACCATaGCTTGACCTCGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAHSGQP*LDLVLE
Trigger: TTCCAGGACGAGGTCAAGTCATGGTTGTCCAGAATG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTTTGCTGGCCCTGGTTaGTGGACTGTGGCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWFAGPG*WTVAFA
Trigger: TGCAAAGGCCACAGTCCAGCAACCAGGGCCAGCAAA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCACGGTACAGGTGATTTaGTGGCTGTTGCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASTVQVI*WLLLAV
Trigger: TACAGCCAGCAACAGCCAGCAAATCACCTGTACCGT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTGCCGAGCTTTGCGCTaGTGCTTGCTTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASCRALR*CLLSPF
Trigger: AAAAGGAGAAAGCAAGCAGCAGCGCAAAGCTCGGCA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGAGTTGCAGGCTGCTGTaGTGTGCAGCTCCGTCCAAA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWSCRLL*CAAPSK
Trigger: TTTGGACGGAGCTGCACAGCACAGCAGCCTGCAACT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTATTCCGTGGATCATCTaGCATGCTTTCCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAIPWII*HAFPHL
Trigger: GAGATGGGGGAAAGCATGGCAGATGATCCACGGAAT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGTCTGGAGGAAGTCTaGAAAGGCGCTAGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRASLEEV*KGARKS
Trigger: AGACTTCCTAGCGCCTTTGCAGACTTCCTCCAGACT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTGGTATTTCCTAACGTaGCCAGTCCTGACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAWYFLT*PVLTQV
Trigger: CACTTGGGTCAGGACTGGGCACGTTAGGAAATACCA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTGGACCTGCTCCCACTaGTGTATGGCTTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASWTCSH*CMAYLL
Trigger: AAGCAGATAAGCCATACAGCAGTGGGAGCAGGTCCA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCGCCGTGCTTCTTTTTaGTTACTGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRARRASF*LLKVTL
Trigger: CAGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCACTGCCAACGCTGCTaGCCGAGGAGCCAGTGGACA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSHCQRC*PRSQWT
Trigger: TGTCCACTGGCTCCTCGGGCAGCAGCGTTGGCAGTG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATGGGCTGGACTCTGCTaGGAAGGTTTTGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLWAGLC*EGFAVP
Trigger: TGGCACAGCAAAACCTTCCCAGCAGAGTCCAGCCCA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGGGCTTTGCTGGAGTTaGGTGTTGAGGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSGLCWS*VLRLGL
Trigger: AAGCCCCAGCCTCAACACCCAACTCCAGCAAAGCCC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGAGGACAGGCCGGTTTaGGTTTGGTGGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLEDRPV*VWWSCL
Trigger: CAGACAAGACCACCAAACCCAAACCGGCCTGTCCTC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCTTCTTTTCTTCAAGTaGTGGCGCTTCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASLLFFK*WRFCSR
Trigger: CCTGCTGCAGAAGCGCCACCACTTGAAGAAAAGAAG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGTCACTCAGGCCTTGTaGGCTCTTGGGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWVTQAL*ALGLLR
Trigger: TCTCAGCAACCCAAGAGCCCACAAGGCCTGAGTGAC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCAGGTGTGTCAGAAGGTaGGACAGACGTAGCACTCTC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGRCVRR*DRRSTL
Trigger: GAGAGTGCTACGTCTGTCCCACCTTCTGACACACCT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCCTGGGAGCAACACTTaGGACTGCACTACTCACTGC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWPGSNT*DCTTHC
Trigger: GCAGTGAGTAGTGCAGTCCCAAGTGTTGCTCCCAGG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACTGCGGTCCAGGAGGTaGAGTCATTCTTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLLRSRR*SHSCCG
Trigger: TCCACAGCAAGAATGACTCCACCTCCTGGACCGCAG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTGCCTGTTCAGTGGTaGTTTGTGGAGAAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRALPVQW*FVEKQS
Trigger: GGACTGCTTCTCCACAAACCACCACTGAACAGGCAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGCTCAAGATGCCAGGTaGGGCAATGTACTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGAQDAR*GNVLSH
Trigger: GTGACTCAGTACATTGCCCCACCTGGCATCTTGAGC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTCTCGGTCTATGTCCTaGAGAATTTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRASRSMS*RILARA
Trigger: GGCTCGAGCCAAAATTCTCCAGGACATAGACCGAGA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCATAGCTATGCAGTCTaGAGGAAGTCTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASHSYAV*RKSAKA
Trigger: CGCCTTTGCAGACTTCCTCCAGACTGCATAGCTATG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGCTCCCACTGCTGTATaGCTTATCTGCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASAPTAV*LICFIL
Trigger: CAGGATGAAGCAGATAAGCCATACAGCAGTGGGAGC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCCAACCGAGACTCCCTaGGTTTATCAAACCAATCCG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAPTETP*VYQTNP
Trigger: CGGATTGGTTTGATAAACCCAGGGAGTCTCGGTTGG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTCCGATCCAGACCATaGCCATTTTCCAACCGAGAC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAFRSRP*PFSNRD
Trigger: GTCTCGGTTGGAAAATGGCCATGGTCTGGATCGGAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTGGATCCTGCCGATGTaGGACCTGAGTGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWWILPM*DLSEHE
Trigger: CTCATGCTCACTCAGGTCCCACATCGGCAGGATCCA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGGGTCTGGGCGACACTaGTTTTGCTTTGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLGSGRH*FCFDCE
Trigger: CTCGCAGTCAAAGCAAAACCAGTGTCGCCCAGACCC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CAA 72 bp ATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTaGAATGGGGAGGACGCCTGCTATGCTGTGCCTGTG +
Preference number: 4 (lower is better)
Translates to: IGWWRQIIRLSS*NGEDACYAVPV
Trigger: CACAGGCACAGCATAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACAGCCCCTGCGCCCTTaGCATGACAGCAGCGATCTG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPQPLRP*HDSSDL
Trigger: CAGATCGCTGCTGTCATGTCAAGGGCGCAGGGGCTG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAACAGGTTTTGCTTGCTaGGCTGGTGTTTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLTGFAC*AGVWAG
Trigger: TCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACCTGTCCCTGCTGGTTaGGCTGGGGACTTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPPVPAG*AGDFAG
Trigger: GCCAGCAAAGTCCCCAGCTCAACCAGCAGGGACAGG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGCTGGAGTTGGGTGTTaGGGCTGGGGCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPAGVGC*GWGFAG
Trigger: CCCAGCAAAGCCCCAGCCTCAACACCCAACTCCAGC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGGGACGTGCCAGGAGTaGAGCTGGATGCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSGTCQE*SWMHGD
Trigger: GTCTCCATGCATCCAGCTTCACTCCTGGCACGTCCC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGAGGGTAGTGACAGGTaGGGAGCTATCTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLEGSDR*GAICGT
Trigger: TGTACCACAGATAGCTCCTCACCTGTCACTACCCTC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCAGATCTTTTGGGGGTaGTCCCAAGGGCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWQIFWG*SQGPTC
Trigger: ACAAGTTGGCCCTTGGGATCACCCCCAAAAGATCTG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTGTTCCTCAAGCTGCTaGTGGAGCTGTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWCSSSC*WSCCCS
Trigger: GCTGCAACAACAGCTCCATCAGCAGCTTGAGGAACA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCCACAACTGATGACATaGCCAGTGGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSPQLMT*PVGTAG
Trigger: TCCAGCAGTCCCCACTGGTCATGTCATCAGTTGTGG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCATTCTGGACAACCATaGCTTGACCTCGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGHSGQP*LDLVLE
Trigger: TTCCAGGACGAGGTCAAGTCATGGTTGTCCAGAATG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACCCTTGGGCAGCCCCTaGGCCCTTGACATGACAGCA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPPLGSP*ALDMTA
Trigger: TGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGAACTCTTGTTTCCTGTaGATGGAGGGCGACTCCGCA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWNSCFL*MEGDSA
Trigger: TGCGGAGTCGCCCTCCATGCACAGGAAACAAGAGTT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGTTTGGGCTGGACTCTaGTGGGAAGGTTTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLVWAGL*WEGFAV
Trigger: CACAGCAAAACCTTCCCAGCAGAGTCCAGCCCAAAC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTGGGCTACAGGTTTTaGTTGCTGAGCTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASLGYRF*LLSWCL
Trigger: CAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTGGACTGTGGCCTTTaGAGGTCCAGGCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLDCGL*RSRLLG
Trigger: GCCCAACAGCCTGGACCTGCAAAGGCCACAGTCCAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGACTTTGGCCCAGGCTaGTGCAATGAGGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWDFGPG*CNEVFS
Trigger: AGAGAAGACCTCATTGCAGCAGCCTGGGCCAAAGTC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGCCTTTTCTGGAGTATaGAACAGAAGCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAAFSGV*NRSSVV
Trigger: CACCACTGAGCTTCTGTTGCATACTCCAGAAAAGGC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGTCACCTTGGTTTGTaGTTTCTTAGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGHLGL*FLRLLL
Trigger: AAGGAGGAGCCTAAGAAAGCACAAACCAAGGTGACC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTCACTGTTGGAGCTTaGACAGGTTTGGCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASFTVGA*TGLASK
Trigger: CTTAGAGGCCAAACCTGTGCAAGCTCCAACAGTGAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGAGCTCCTCCATTTCTaGTGCCTGGCGCAATTCTTC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWELLHF*CLAQFF
Trigger: GAAGAATTGCGCCAGGCAGCAGAAATGGAGGAGCTC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGGCTGTCTTAGGGCTTaGCGGGGGAACTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSGCLRA*RGNFSH
Trigger: ATGGCTAAAGTTCCCCCGGCAAGCCCTAAGACAGCC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAAGCAGTGCCCATGGTaGTGTAAGTTGACTGTGTTC +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASKQCPW*CKLTVF
Trigger: GAACACAGTCAACTTACAGCACCATGGGCACTGCTT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGACTGGAGTGAGACTTaGCATGCTCAATGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLADWSET*HAQCFQ
Trigger: CTGAAAGCATTGAGCATGGCAAGTCTCACTCCAGTC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGGCTATGGCCGCCCCTaGATCTTCCAGGTGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPGYGRP*IFQVGL
Trigger: CAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTTGTTTCCTGTGCATaGAGGGCGACTCCGCAGCGG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLVSCA*RATPQR
Trigger: CCGCTGCGGAGTCGCCCTCCATGCACAGGAAACAAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGCCAGCCTGTTGAGCTaGGGGCTTGGCTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPASLLS*GLGCHW
Trigger: CCAGTGACAGCCAAGCCCCCAGCTCAACAGGCTGGC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTTAGCTGCAGTCTGTaGGCCAGGCTGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLSCSL*ARLLGW
Trigger: CCAGCCCAACAGCCTGGCCCACAGACTGCAGCTAAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTGGCTGTTGAGGCTGTaGCTTTGCTGGGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSWLLRL*LCWGGL
Trigger: CAGCCCACCCCAGCAAAGCCACAGCCTCAACAGCCA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTTCTTGAGGAGTTGTaGGCTGTGATTTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAFLEEL*AVIWGH
Trigger: ATGCCCCCAAATCACAGCCCACAACTCCTCAAGAAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTTCTGTGTAGTCACTaGAATCTCAGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAFLCSH*NLRDCW
Trigger: CCAGCAGTCCCTGAGATTCCAGTGACTACACAGAAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGATTTATTCGAGTGTaGGGAAAGTGGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGFIRV*GKWRGR
Trigger: CCTACCTCTCCACTTTCCCCACACTCGAATAAATCC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATGTCTCATCATGAACTaGGCCTGCCGCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLCLIMN*ACRSSS
Trigger: AGAGGAAGAGCGGCAGGCCCAGTTCATGATGAGACA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCCATCCTTGGCTCTGTaGTATTTCAATGGCTACCAC +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAPSLAL*YFNGYH
Trigger: GTGGTAGCCATTGAAATACCACAGAGCCAAGGATGG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTACTGAAAAGGAGCCCTaGAACTTTCGTCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRATEKEP*NFRLLL
Trigger: CAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTCGAGCCATGGTATTaGTTCTGCACATTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALEPWY*FCTFFS
Trigger: GGAGAAGAATGTGCAGAACCAATACCATGGCTCGAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTGTCCTGGAGAATTTTaGCTCGAGCCATGGTATTGG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASCPGEF*LEPWYW
Trigger: CCAATACCATGGCTCGAGCCAAAATTCTCCAGGACA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTATGGGGTCGGGGCTTaGGTGGGAAGAGCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVYGVGA*VGRAGD
Trigger: ATCACCCGCTCTTCCCACCCAAGCCCCGACCCCATA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTTGATAGGATGGCTGTaGAGTTGGGGTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLIGWL*SWGRLS
Trigger: GCTCAACCTACCCCAACTCCACAGCCATCCTATCAA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCCATTCCCATTGGCTaGCCAACAGGACTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWAIPIG*PTGLSG
Trigger: TCCACTAAGTCCTGTTGGCCAGCCAATGGGAATGGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTAGCCATTGTTGTCTCTaGGGACCAGGTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLASHCCL*GPGFLL
Trigger: AAGCAAGAAACCTGGTCCCCAGAGACAACAATGGCT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGCTGGCTGTTTTGACTaGAGTGAGACTTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGAGCFD*SETCHA
Trigger: AGCATGGCAAGTCTCACTCCAGTCAAAACAGCCAGC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGATCACAGAGGGCTTTaGGGACTGCTGGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLDHRGL*GLLAVL
Trigger: CAAAACAGCCAGCAGTCCCCAAAGCCCTCTGTGATC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCTACCAGGACTACTGTaGGATTTCTCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASLPGLL*DFSMVG
Trigger: TCCCACCATTGAGAAATCCCACAGTAGTCCTGGTAG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTCTTCCAGGTGGGTCTaGGCGACACTGGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWSSRWV*ATLVLL
Trigger: AAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATGCCCGAGGAGCCAGTaGACACGGAGGTCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPCPRSQ*TRRSLQ
Trigger: CTGCAGAGACCTCCGTGTCCACTGGCTCCTCGGGCA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGTGGCAACAGGTTGTTaGGGCTGGGGCTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVVATGC*GWGFAG
Trigger: TCCAGCAAAGCCCCAGCCTCAACAACCTGTTGCCAC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGCTGGAGTTGGCTGTTaGGGCTGTGGCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPAGVGC*GCGFAG
Trigger: CCCAGCAAAGCCACAGCCTCAACAGCCAACTCCAGC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCAAACAAAGCCATTCTTaGATCTCAGTCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGKQSHS*ISVRWG
Trigger: GCCCCACCTGACTGAGATTCAAGAATGGCTTTGTTT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTATCTCCAAGTTGTCCTaGTATTGCTCTCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAISKLS*YCSLCL
Trigger: CAGACACAGAGAGCAATATCAGGACAACTTGGAGAT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGCAGTGCCTTCTGCCTaGGGCTGTGTTACGTCTCTG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVAVPSA*GCVTSL
Trigger: CAGAGACGTAACACAGCCTCAGGCAGAAGGCACTGC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAAATCCTTCTGGGTCTaGTTCTATGCTAGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAKSFWV*FYARRV
Trigger: TACTCGCCTAGCATAGAATCAGACCCAGAAGGATTT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCAGGCTGCCATCTACTaGTCCATTGTATGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWQAAIY*SIVCVL
Trigger: GAGGACACATACAATGGATCAGTAGATGGCAGCCTG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGGCATTGGCTGGCTTTaGTGCAGGGCTGATAATGAA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWGIGWL*CRADNE
Trigger: TTCATTATCAGCCCTGCATCAAAGCCAGCCAATGCC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTATATCCCACTCATCCTaGTCTTCGTCATCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAISHSS*SSSSVW
Trigger: CCAAACTGATGACGAAGATCAGGATGAGTGGGATAT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTGGGTCTGGTACTGCTaGCCTCACTGTCAGACATAT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWWVWYC*PHCQTY
Trigger: ATATGTCTGACAGTGAGGTCAGCAGTACCAGACCCA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGTCGGAGGAACTAGCTaGGCTTCTGTTTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGVGGTS*ASVCVC
Trigger: ACAAACACAAACAGAAGCTCAGCTAGTTCCTCCGAC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTTGAGCCTGGGGTGTaGAGGACATGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFVEPGV*RTWWPQ
Trigger: CTGTGGCCACCATGTCCTTCACACCCCAGGCTCAAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGTCTGCAGATATGCTTaGTATTGGACTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASVCRYA*YWTACH
Trigger: ATGGCAAGCAGTCCAATATCAAGCATATCTGCAGAC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAAAGTCTGTCACTTCTTaGGACCTCCGTGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLKSVTS*DLRVSV
Trigger: CACTGAGACACGGAGGTCTCAAGAAGTGACAGACTT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTAGCATGGTAATAATGTaGGAGACCAGCAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLASMVIM*ETSKVI
Trigger: GATCACCTTGCTGGTCTCTCACATTATTACCATGCT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGTTCTGGCAGAAGATaGAGAATGGCCAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRASSGRR*RMAKRD
Trigger: GTCTCTTTTGGCCATTCTTCATCTTCTGCCAGAACT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTGGACTTTCTTCTTCTaGATTCTGGGCCACAATTGG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAWTFFF*ILGHNW
Trigger: CCAATTGTGGCCCAGAATTCAGAAGAAGAAAGTCCA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTCTATAAGTTTCCCTaGGTGTTCTGCACTTCCACC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAFYKFP*VFCTST
Trigger: GGTGGAAGTGCAGAACACTCAGGGAAACTTATAGAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGCTTCCCCACTTTGCTaGTTAATGATGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAASPLC*LMMLCT
Trigger: AGTACAGAGCATCATTAATCAGCAAAGTGGGGAAGC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTGGGGACTGCTGGAGTaGGACTTTCTGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSWGLLE*DFLQLC
Trigger: GCAGAGCTGCAGAAAGTCTCACTCCAGCAGTCCCCA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTGCCGATGTGGGACCTaGGTGAGCATGAGCCCCTTT +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSCRCGT*VSMSPF
Trigger: AAAGGGGCTCATGCTCACTCAGGTCCCACATCGGCA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTTGAGGCTGGGGCTTTaGTGGAATGGGCTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLRLGL*WNGLLR
Trigger: CCTCAGCAGCCCATTCCAGCAAAGCCCCAGCCTCAA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTTCTTGTCTTTCTCTaGCTTCTTCACTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALLVFL*LLHCWS
Trigger: GCTCCAACAGTGAAGAAGGCAGAGAAAGACAAGAAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTCATTCGCTGTGGTCTaGCTTTTCACATCCATTGCA +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLASFAVV*LFTSIA
Trigger: TGCAATGGATGTGAAAAGGCAGACCACAGCGAATGA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAGGGTAGTTGCAGGCTaGTGTGCTGTGCAGCTCCGT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVRVVAG*CAVQLR
Trigger: ACGGAGCTGCACAGCACAGCAGCCTGCAACTACCCT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTGCGACTGTTTGAACTaGTACACTGGAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASCDCLN*YTGDFG
Trigger: TCCAAAGTCTCCAGTGTAGCAGTTCAAACAGTCGCA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCCTGGAACTTTCGTCTaGTGTTGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWPGTFV*CWTQRL
Trigger: AAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATGGTATTTCCTAACGTaGCCAGTCCTGACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLWYFLT*PVLTQV
Trigger: CACTTGGGTCAGGACTGGGCACGTTAGGAAATACCA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTATGACCAGTGGGGACTaGTGGAGTGAGACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSMTSGD*WSETFC
Trigger: GCAGAAAGTCTCACTCCAGCAGTCCCCACTGGTCAT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTGGTTTTGCTTTGACTaGGAGATGGTCCATGAGATC +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASWFCFD*EMVHEI
Trigger: GATCTCATGGACCATCTCGCAGTCAAAGCAAAACCA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACCACGCTATACCCACTaGCAACGCTGCTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLPRYTH*QRCCPR
Trigger: CCTCGGGCAGCAGCGTTGGCAGTGGGTATAGCGTGG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTAGCTGGTGTTTGGGCTaGACTCTGCTGGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSSWCLG*TLLGRF
Trigger: AAACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGGGCTTTGCTGGAGTTaGGTGTTGAGGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVGLCWS*VLRLGL
Trigger: AAGCCCCAGCCTCAACACCCAACTCCAGCAAAGCCC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAGGCTGGGGCTTTGCTaGAGTTGGCTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVRLGLC*SWLLRL
Trigger: CAGCCTCAACAGCCAACTCCAGCAAAGCCCCAGCCT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGCAACAGAAGCTCAGTaGTGTTGCAAAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGATEAQ*CCKEDR
Trigger: TCTGTCCTCTTTGCAACACCACTGAGCTTCTGTTGC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGTACAGGTGATTTGCTaGCTGTTGCTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLVQVIC*LLLAVL
Trigger: CAGTACAGCCAGCAACAGCCAGCAAATCACCTGTAC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGTGGCGGTGGCTTTTTaGACTCCGGTGCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPVAVAF*TPVLWG
Trigger: GCCCCAAAGCACCGGAGTCCAAAAAGCCACCGCCAC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTGGCGGTGGCTTTTTaGACTCCGGTGCTTTGGGGC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFVAVAF*TPVLWG
Trigger: GCCCCAAAGCACCGGAGTCCAAAAAGCCACCGCCAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGACCTGTGGACTTGGGTaGTCCCTGAGCAGCCAGAGT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVTCGLG*SLSSQS
Trigger: ACTCTGGCTGCTCAGGGACCACCCAAGTCCACAGGT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTCTTGTCTGGCTTCTaGGCGAGGACGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFVLSGF*ARTAFS
Trigger: CGAGAAGGCCGTCCTCGCCCAGAAGCCAGACAAGAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCGCTTCTGCAGCAGGTaGCTTCTTTTCCTTTTTGTC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGRFCSR*LLFLFV
Trigger: GACAAAAAGGAAAAGAAGCCACCTGCTGCAGAAGCG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGCAGATCTTCAGGCCTaGTGTCTGGCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVADLQA*CLAAAL
Trigger: GAGAGCAGCAGCCAGACACCAGGCCTGAAGATCTGC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTCTGTGTTTCCCTGCTaGGCTTTTTCCTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGSVFPC*AFSFPL
Trigger: AAGGGGAAAGGAAAAAGCCCAGCAGGGAAACACAGA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTAGAGAGATTACTGGGTaGCGTCTTTGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAREITG*RLWSFS
Trigger: AGAGAAAGACCAAAGACGCCACCCAGTAATCTCTCT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCTTAGGAGAAGTTGCTaGAGGCAACGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVLRRSC*RQRWGW
Trigger: CCACCCCCACCGTTGCCTCCAGCAACTTCTCCTAAG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAAACCTCATTCGCTGTaGTCTGCCTTTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASKPHSL*SAFSHP
Trigger: TGGATGTGAAAAGGCAGACCACAGCGAATGAGGTTT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTACCGTGTACCATCCTTaGCTCTGTGGTATTTCAATG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRATVYHP*LCGISM
Trigger: CATTGAAATACCACAGAGCCAAGGATGGTACACGGT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCTTTGGGTGGAGATGTaGCACCCATATATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSLWVEM*HPYMEG
Trigger: GCCCTCCATATATGGGTGCCACATCTCCACCCAAAG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGGAAAGTGGTGAGATaGGTGAGTAAAGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAGKVVR*VSKGLL
Trigger: CAAAAGTCCTTTACTCACCCATCTCACCACTTTCCC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCTGAGGAGCTGTTCTTaGCCGCTCAATGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVLRSCS*PLNAVL
Trigger: CAGCACGGCATTGAGCGGCCAAGAACAGCTCCTCAG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTATGGGGTCGGGGCTTaGGTGGGAAGAGCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFYGVGA*VGRAGD
Trigger: ATCACCCGCTCTTCCCACCCAAGCCCCGACCCCATA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACATAGCTATGCAGTCTaGAGGAAGTCTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLHSYAV*RKSAKA
Trigger: CGCCTTTGCAGACTTCCTCCAGACTGCATAGCTATG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCAGCCATTGTTGTCTCTaGGGACCAGGTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGSHCCL*GPGFLL
Trigger: AAGCAAGAAACCTGGTCCCCAGAGACAACAATGGCT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGTACACCTTCACAAATaGGTCCGAGTAGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAVHLHK*VRVAIV
Trigger: AACAATGGCTACTCGGACCCATTTGTGAAGGTGTAC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGTACACCTTCACAAATaGGTCCGAGTAGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAVHLHK*VRVAIV
Trigger: AACAATGGCTACTCGGACCCATTTGTGAAGGTGTAC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGATCACAGAGGGCTTTaGGGACTGCTGGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSDHRGL*GLLAVL
Trigger: CAAAACAGCCAGCAGTCCCCAAAGCCCTCTGTGATC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGGGATTTCTCAATGGTaGGAACCTGCATATCCTTGG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGGISQW*EPAYPW
Trigger: CCAAGGATATGCAGGTTCCCACCATTGAGAAATCCC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCTTTGACTGCGAGATaGTCCATGAGATCGGAGATG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWALTAR*SMRSEM
Trigger: CATCTCCGATCTCATGGACCATCTCGCAGTCAAAGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCCTGCATCTTCCAGGTaGGTCTGGGCGACACTGGTT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVPASSR*VWATLV
Trigger: AACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTTCAGCTGCGGCTATaGCCGCCCCTGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFLQLRL*PPLHLP
Trigger: TGGAAGATGCAGGGGCGGCCATAGCCGCAGCTGAAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACCTGCGCCCTTGACATaGCAGCAGCGATCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLPAPLT*QQRSVS
Trigger: GGAGACAGATCGCTGCTGTCATGTCAAGGGCGCAGG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCTACACACGGTGCTTTaGCACTCAGTACATGTGTTA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLHTVL*HSVHVL
Trigger: TAACACATGTACTGAGTGTCAAAGCACCGTGTGTAG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGTTGCTGGCTGTACTaGGGCAGCCTTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFCCWLY*GSLWGW
Trigger: CCAACCCCAAAGGCTGCCTCAGTACAGCCAGCAACA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCCTGTGCCTGCACTTaGGAGCTCAGAATAGCAGGC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFACACT*ELRIAG
Trigger: GCCTGCTATTCTGAGCTCTCAAGTGCAGGCACAGGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGGCTTCGGGGGCTGCTaGGACTGGGGTGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLGFGGC*DWGVAW
Trigger: CCAAGCCACACCCCAGTCTCAGCAGCCCCCGAAGCC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCCCCCAGATTCAAACTaGACCGTCTTGACTGCTCCG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSPPDSN*TVLTAP
Trigger: CGGAGCAGTCAAGACGGTTCAGTTTGAATCTGGGGG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGGAGGGGCTTGCTTTaGTGGGGCAGCTGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGRGLL*WGSWPS
Trigger: ACTGGGCCAGCTGCCCCATCAAAGCAAGCCCCTCCC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCGGGGTTTTCTCAATTaGTGGTGTTTCTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGRGFLN*WCFFLW
Trigger: CCAGAGAAAGAAACACCATCAATTGAGAAAACCCCG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATCCTTGGGTAACGTCTaGGGTGTGGCGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLSLGNV*GVAPGR
Trigger: TCTGCCAGGCGCCACACCTCAGACGTTACCCAAGGA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTCTGTTGCCGCTTCATaGGTTCTTCATAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGSVAAS*VLHKQH
Trigger: ATGCTGCTTATGAAGAACTCATGAAGCGGCAACAGA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTGGCTGAATTCAGTCTaGGGAGCTGTTCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVWLNSV*GAVLGR
Trigger: GCGGCCAAGAACAGCTCCTCAGACTGAATTCAGCCA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTGAGTCTGATAAGGTaGCACTTGCTGATGGTACAA +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASLSLIR*HLLMVQ
Trigger: TTGTACCATCAGCAAGTGTCACCTTATCAGACTCAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGTTGAGCCTGGGGTGTaGAGGACATGGTGGCCACAG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLVEPGV*RTWWPQ
Trigger: CTGTGGCCACCATGTCCTTCACACCCCAGGCTCAAC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGGAGTTGGGGTAGGTTaGGCCTGGGGTGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLGVGVG*AWGVKD
Trigger: GTCCTTCACACCCCAGGCTCAACCTACCCCAACTCC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCAGTTCTGGCAGAAGATaGAGAATGGCCAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGSSGRR*RMAKRD
Trigger: GTCTCTTTTGGCCATTCTTCATCTTCTGCCAGAACT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTGCGAGATGGTCCATaGGATCGGAGATGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLRDGP*DRRWPS
Trigger: TGAAGGCCATCTCCGATCTCATGGACCATCTCGCAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACGTCTTTTACTTGGTTaGATGCGGAGTTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLRLLLG*MRSCCT
Trigger: TGTGCAGCAACTCCGCATTCAACCAAGTAAAAGACG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCGTCTTTTACTTGGTTaGATGCGGAGTTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWRLLLG*MRSCCT
Trigger: TGTGCAGCAACTCCGCATTCAACCAAGTAAAAGACG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTTTGGCCCAGGCTGCTaGAATGAGGTCTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSFGPGC*NEVFSK
Trigger: CTTAGAGAAGACCTCATTGCAGCAGCCTGGGCCAAA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACCCAGGTACCTTAGCTaGAGTCTGTGGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLPRYLS*SLWARL
Trigger: CAGCCTGGCCCACAGACTGCAGCTAAGGTACCTGGG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTGAGGCTGGGGCTTTaGTGGAGTTGGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPLRLGL*WSWVLR
Trigger: CCTCAGCACCCAACTCCAGCAAAGCCCCAGCCTCAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCTTTGGTTCAACATCTaGAACAGGGGCCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLWFNI*NRGLCL
Trigger: CAAGCAAAGGCCCCTGTTGCAGATGTTGAACCAAAG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGCTGTGTTACGTCTCTaGTTTCCTTCTGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLAVLRL*FPSVCP
Trigger: AGGACAGACAGAAGGAAAGCAGAGACGTAACACAGC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTCAGGATTCTCTTTGTaGTCCTTCCTGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASSGFSL*SFLEGK
Trigger: TTTTCCTTCCAGGAAGGAGCACAAAGAGAATCCTGA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTTTGTGACTTGGGCTaGTGTCACTGTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAFCDLG*CHCLHQ
Trigger: TTGATGAAGACAGTGACAGCAGCCCAAGTCACAAAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTGGAGCCACTGGAGCTaGAGCTGCCAACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSWSHWS*SCQLSF
Trigger: AAAAGAAAGTTGGCAGCTGCAGCTCCAGTGGCTCCA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTGGAATCTCAGGGACTaGTGGCTTGGGGGCAATTGG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSWNLRD*WLGGNW
Trigger: CCAATTGCCCCCAAGCCAGCAGTCCCTGAGATTCCA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCTTGCTGTGGAATACTaGGGGGTACTAATCCCAACT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLAVEY*GVLIPT
Trigger: AGTTGGGATTAGTACCCCGCAGTATTCCACAGCAAG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTAGGTGGAGTCATTCTTaGTGTGGAATACTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSRWSHS*CGILRG
Trigger: ACCCCGCAGTATTCCACAGCAAGAATGACTCCACCT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCGCTCCAAGTCAAGTTaGTGTTGTTGTTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASRSKSS*CCCLSS
Trigger: TGAAGACAAACAACAACAGCAACTTGACTTGGAGCG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTGCAGCTGTTGGATCTaGTCAAGTTGTAACTGTTGT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLACSCWI*SSCNCC
Trigger: ACAACAGTTACAACTTGAGCAGATCCAACAGCTGCA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTGCGACTGTTTGAACTaGTACACTGGAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGCDCLN*YTGDFG
Trigger: TCCAAAGTCTCCAGTGTAGCAGTTCAAACAGTCGCA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTGCACAGATATCTCTaGGACTGTTTGAACTGCTAC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRALHRYL*DCLNCY
Trigger: GTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTAGGAGTCTGCAGATATaGTTGATATTGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLARSLQI*LILDCL
Trigger: CAAGCAGTCCAATATCAAGCATATCTGCAGACTCCT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTCATGGAGACTAAATaGAGAGCTCAAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASFMETK*RAQSCC
Trigger: ACAGCAGCTTTGAGCTCTGCATTTAGTCTCCATGAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGATCTAAGCTCTCTGTaGCCCTACGGAATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWDLSSL*PYGILA
Trigger: AGCAAGAATTCCGTAGGGGCACAGAGAGCTTAGATC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACGGCAAAGGTCCAGCTaGAGCCCTGGCCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLRQRSS*SPGHSH
Trigger: ATGGGAATGGCCAGGGCTGCAGCTGGACCTTTGCCG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCGCCGTGCTTCTTTTTaGTTACTGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSRRASF*LLKVTL
Trigger: CAGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGGCTTGCTGCCGCCGTaGTTCTTTTTGCTTACTGAA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSGLLPP*FFLLTE
Trigger: TTCAGTAAGCAAAAAGAAGCACGGCGGCAGCAAGCC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGACTGGAGTGAGACTTaGCATGCTCAATGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWDWSET*HAQCFQ
Trigger: CTGAAAGCATTGAGCATGGCAAGTCTCACTCCAGTC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGGGCTTGGCTGTCACTaGAGGTTGTGCTGGGGACTT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPGLGCH*RLCWGL
Trigger: AAGTCCCCAGCACAACCTCCAGTGACAGCCAAGCCC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGGGCTTTGCTGGAGTTaGCTGTTGAGGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVGLCWS*LLRLWL
Trigger: AAGCCACAGCCTCAACAGCCAACTCCAGCAAAGCCC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCTCCTTCTTCTGAACTaGATCCTTGCTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLLLLN*ILALRS
Trigger: ACTTCTGAGAGCAAGGATCCAGTTCAGAAGAAGGAG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGAGTCAGGTGGGGCGTTaGGTTAAATCCACAGAGATT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWSQVGR*VKSTEI
Trigger: AATCTCTGTGGATTTAACCCAACGCCCCACCTGACT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGCACGGGGGATGCTTTaGGTCCTGAGGATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLARGML*VLRMQV
Trigger: CACCTGCATCCTCAGGACCCAAAGCATCCCCCGTGC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTGGGTTGCTGAGAACTaGAAGTGTCTGATTTGTCCT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGWVAEN*KCLICP
Trigger: AGGACAAATCAGACACTTCCAGTTCTCAGCAACCCA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTCAGGAGAAACCTTCTaGGGCTGTGTTTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRASGETF*GCVFFS
Trigger: AGAAAAGAAAACACAGCCCCAGAAGGTTTCTCCTGA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCATCATCGTCGAAGCTaGTACTACTCTTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGHHRRS*YYSFES
Trigger: TGACTCGAAAGAGTAGTACCAGCTTCGACGATGATG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAGTTCCTCACTCTCCTaGCTTTTAGTTTCTCGGAAT +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASSSSLS*LLVSRN
Trigger: ATTCCGAGAAACTAAAAGCCAGGAGAGTGAGGAACT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGGCGCAATTCTTCTGTaGGAGACGCATCCTCGATGG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSGAILL*ETHPRW
Trigger: CCATCGAGGATGCGTCTCCCACAGAAGAATTGCGCC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGAACAAGAGGACCTATaGAGCTCCTCCATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWEQEDL*SSSISA
Trigger: AGCAGAAATGGAGGAGCTCCATAGGTCCTCTTGTTC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCCTGGGAGCAACACTTaGGACTGCACTACTCACTGC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVPGSNT*DCTTHC
Trigger: GCAGTGAGTAGTGCAGTCCCAAGTGTTGCTCCCAGG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGGATCTGTTTCTGTTTaGCATCCTAAACTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLGSVSV*HPKLPP
Trigger: AGGGGGCAGTTTAGGATGCCAAACAGAAACAGATCC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCTCAGGAGGGGGATTTaGCAGTGTTCTCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLRRGI*QCSLHF
Trigger: AAAGTGAAGAGAACACTGCCAAATCCCCCTCCTGAG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCTCGAGCCATGGTATTaGTTCTGCACATTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLEPWY*FCTFFS
Trigger: GGAGAAGAATGTGCAGAACCAATACCATGGCTCGAG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTCTCGGTCTATGTCCTaGAGAATTTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSSRSMS*RILARA
Trigger: GGCTCGAGCCAAAATTCTCCAGGACATAGACCGAGA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACGCTCAATGCCGTGCTaGCTTTCTACTCGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPRSMPC*LSTRLG
Trigger: ACCCAGCCGAGTAGAAAGCCAGCACGGCATTGAGCG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGATAGGATGGCTGTaGAGTTGGGGTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSLIGWL*SWGRLS
Trigger: GCTCAACCTACCCCAACTCCACAGCCATCCTATCAA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGAGACGATCTGTTTTaGACAGATCCTTTTCATGGA +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAGDDLF*TDPFHG
Trigger: TCCATGAAAAGGATCTGTCCAAAACAGATCGTCTCC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGCAGAAGATGAAGAATaGCCAAAAGAGACATCCAGA +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAAEDEE*PKETSR
Trigger: TCTGGATGTCTCTTTTGGCCATTCTTCATCTTCTGC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGTATCTGCAGATATaGGCGGCAAAGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSLYLQI*AAKVQL
Trigger: CAGCTGGACCTTTGCCGCCCATATCTGCAGATACAA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTTATCCACAACTTTTaGTGGCTCATGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALIHNF*WLMKFQ
Trigger: CTGGAACTTCATGAGCCACCAAAAGTTGTGGATAAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGACCAGTGGGGACTGCTaGAGTGAGACTTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVTSGDC*SETFCS
Trigger: GCTGCAGAAAGTCTCACTCCAGCAGTCCCCACTGGT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCAATCTCTCCTGTAATTaGGTGAGAGGCAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGNLSCN*VRGSLG
Trigger: TCCAAGACTGCCTCTCACCCAATTACAGGAGAGATT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGGGTCTGGGCGACACTaGTTTTGCTTTGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSGSGRH*FCFDCE
Trigger: CTCGCAGTCAAAGCAAAACCAGTGTCGCCCAGACCC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTTGCGTCTTTTACTTaGTTGAATGCGGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAFASFT*LNAELL
Trigger: CAGCAACTCCGCATTCAACCAAGTAAAAGACGCAAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTCCCTTGGTCCTTCTaGGCAACTTTTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAFPWSF*ATFCFF
Trigger: AAAGAAACAAAAAGTTGCTCAGAAGGACCAAGGGAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCACAGGTTTTGCTTGCTaGGCTGGTGTTTGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSTGFAC*AGVWAG
Trigger: TCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAATGGGCTGCTGAGGTaGAGGCTTTGTTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFNGLLR*RLCWTR
Trigger: CCTGGTCCAACAAAGCCTTCACCTCAGCAGCCCATT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAAGAGCTCTTTGCATCTaGCAGTTTAAACAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLRALCI*QFKQSH
Trigger: GTGGCTCTGTTTAAACTGTCAGATGCAAAGAGCTCT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTATTGCTCTCTGTGTCTaGCAGTTTAAACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAIALCV*QFKQSH
Trigger: ATGGCTTTGTTTAAACTGTCAGACACAGAGAGCAAT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTTCATCTTGCCTGGTaGGCAGGCTGCCATCTACTG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFVHLAW*AGCHLL
Trigger: CAGTAGATGGCAGCCTGCTCACCAGGCAAGATGAAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGAGGGTAGTGACAGGTaGGGAGCTATCTGTGGTACA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSEGSDR*GAICGT
Trigger: TGTACCACAGATAGCTCCTCACCTGTCACTACCCTC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCAGATCTTTTGGGGGTaGTCCCAAGGGCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVQIFWG*SQGPTC
Trigger: ACAAGTTGGCCCTTGGGATCACCCCCAAAAGATCTG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCCATCAGTGATCCCCTaGGATATGGTGCTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVPSVIP*DMVLSV
Trigger: GACTGACAGCACCATATCTCAGGGGATCACTGATGG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGTAACCATATGGCCCTaGTCTATCATATTGATAGTG +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAVTIWP*SIILIV
Trigger: CACTATCAATATGATAGATCAGGGCCATATGGTTAC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCCTGTAGTCTTGCTTaGATAATCCATTACCTCACC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWACSLA*IIHYLT
Trigger: GGTGAGGTAATGGATTATTCAAGCAAGACTACAGGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTTGAGTCTGATAAGGTaGCACTTGCTGATGGTACAA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLSLIR*HLLMVQ
Trigger: TTGTACCATCAGCAAGTGTCACCTTATCAGACTCAA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGCTTCCCCACTTTGCTaGTTAATGATGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLASPLC*LMMLCT
Trigger: AGTACAGAGCATCATTAATCAGCAAAGTGGGGAAGC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACCACAACTGATGACATaGCCAGTGGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPPQLMT*PVGTAG
Trigger: TCCAGCAGTCCCCACTGGTCATGTCATCAGTTGTGG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTAAGGAAGTCGTTGGATaGGAATCTATCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAKEVVG*ESIIIP
Trigger: TGGGATTATGATAGATTCTCATCCAACGACTTCCTT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCGTGGCTTCTGCTTTTaGTCACAGAGGGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFRGFCF*SQRALG
Trigger: CCCCAAAGCCCTCTGTGATCAAAAGCAGAAGCCACG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTGCGAGATGGTCCATaGGATCGGAGATGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFLRDGP*DRRWPS
Trigger: TGAAGGCCATCTCCGATCTCATGGACCATCTCGCAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTTGCTGGCCCTGGTTaGTGGACTGTGGCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPFAGPG*WTVAFA
Trigger: TGCAAAGGCCACAGTCCAGCAACCAGGGCCAGCAAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGACTTTGGCCCAGGCTaGTGCAATGAGGTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVDFGPG*CNEVFS
Trigger: AGAGAAGACCTCATTGCAGCAGCCTGGGCCAAAGTC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTGAGGCTGGGGCTTTaGTGGAGTTGGCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFLRLGL*WSWLLR
Trigger: CCTCAACAGCCAACTCCAGCAAAGCCCCAGCCTCAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTGTGCTGGCGCCTGTaGTGCAGAAGTTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLCWRL*CRSWWC
Trigger: GCACCACCAACTTCTGCAGCACAGGCGCCAGCACAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTCTGAACTGGATCCTTaGTCTCAGAAGTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSSELDP*SQKWAQ
Trigger: CTGGGCCCACTTCTGAGAGCAAGGATCCAGTTCAGA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCCAGTGAAGCCACTTTaGCTATGGGTCCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSPVKPL*LWVLLR
Trigger: CCGAAGAAGGACCCATAGGCAAAGTGGCTTCACTGG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGGCCTGGTGTCTGGCTaGTGCTCTCCTTCACAAGCC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSGLVSG*CSPSQA
Trigger: GGCTTGTGAAGGAGAGCAGCAGCCAGACACCAGGCC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGGGCCATGGGACCTGTaGCGAGCTTTGCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQGPWDL*RALRCC
Trigger: GCAGCAGCGCAAAGCTCGGCACAGGTCCCATGGCCC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCTCTTCCTCTGCTGCTaGTCCAGTTCTCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVLFLCC*SSSLCF
Trigger: GAAGCAGAGAGAACTGGAGCAGCAGCAGAGGAAGAG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGGAATCTCAGGGACTaGTGGCTTGGGGGCAATTGG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFWNLRD*WLGGNW
Trigger: CCAATTGCCCCCAAGCCAGCAGTCCCTGAGATTCCA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAGTTGCAGGCTGCTGTaGTGTGCAGCTCCGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSCRLL*CAAPSK
Trigger: TTTGGACGGAGCTGCACAGCACAGCAGCCTGCAACT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTTGCACAGATATCTCTaGGACTGTTTGAACTGCTAC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLHRYL*DCLNCY
Trigger: GTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTCATCAAGTTCTGCTTaGTTCTTTCTAAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLASSSSA*FFLSLA
Trigger: TGCCAAGCTTAGAAAGAAGCAAGCAGAACTTGATGA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGTCATCCATGATGAATaGTATATCACGGTCATAACC +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAVIHDE*YITVIT
Trigger: GGTTATGACCGTGATATAGCATTCATCATGGATGAC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACTTTGCTGGCCCTGGTaGAACCTTTCCCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLCWPW*NLSLTR
Trigger: CCTGGTCAGGGAAAGGTTCCACCAGGGCCAGCAAAG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGCTGTCCTGTTTGGATaGAAGTTCCTTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSAVLFG*KFLLWG
Trigger: TCCCCAAAGAAGGAACTTCCATCCAAACAGGACAGC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAGGTCCATGAAGGGTTaGCTGTTTCACCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPRSMKG*LFHQWR
Trigger: CCGCCACTGGTGAAACAGCCAACCCTTCATGGACCT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTGCCACTGGAGGCTGTaGGGCTGTAGCCGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQCHWRL*GCSRGR
Trigger: CCTACCCCGGCTACAGCCCCACAGCCTCCAGTGGCA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGGATCCTTTTGGTACTaGCTTTGTATCTGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGGSFWY*LCIWFR
Trigger: CCTAAACCAGATACAAAGCCAGTACCAAAAGGATCC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTGTGCCAGACGGTGTTaGGGATCCTTTTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSCARRC*GSFWYW
Trigger: CCAGTACCAAAAGGATCCCCAACACCGTCTGGCACA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAAGCTGGCCCAGTCTGTaGATGAGGTGCTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLSWPSL*MRCLLT
Trigger: GGTCAGCAAGCACCTCATCCACAGACTGGGCCAGCT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTATGGGTGCGGACCTGTaGACTTGGGTGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSMGADL*TWVVPE
Trigger: CTCAGGGACCACCCAAGTCCACAGGTCCGCACCCAT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGTCTTGTCTGGCTTCTaGGCGAGGACGGCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSVLSGF*ARTAFS
Trigger: CGAGAAGGCCGTCCTCGCCCAGAAGCCAGACAAGAC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTCAGGCCTGGTGTCTaGCTGCTGCTCTCCTTCACA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPFRPGV*LLLSFT
Trigger: TGTGAAGGAGAGCAGCAGCCAGACACCAGGCCTGAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCTGTCCTGTCTTTGCTaGGCTCCCCTCGGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSLSCLC*APLGLP
Trigger: AGGAAGGCCGAGGGGAGCCCAGCAAAGACAGGACAG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAGGTGTGTCAGAAGGTaGGACAGACGTAGCACTCTC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVRCVRR*DRRSTL
Trigger: GAGAGTGCTACGTCTGTCCCACCTTCTGACACACCT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTAATCGTGTCAGCTTGTaGCCTCTCAGGTTTAGTTGC +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSNRVSL*PLRFSC
Trigger: GCAACTAAACCTGAGAGGCCACAAGCTGACACGATT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTGAGAAGAAGGTGTTaGGGCCAACCCAGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVLRRRC*GQPSLR
Trigger: CCTGAGACTGGGTTGGCCCCAACACCTTCTTCTCAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTGGGTGAGATTTGGATaGATGGGTAGAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWWVRFG*MGRNRK
Trigger: CTTCCTGTTTCTACCCATCCATCCAAATCTCACCCA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACAGGGACTGCTGGCTTaGGGGCAATTGGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLQGLLA*GQLEVC
Trigger: GCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACTGCGGTCCAGGAGGTaGAGTCATTCTTGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPLRSRR*SHSCCG
Trigger: TCCACAGCAAGAATGACTCCACCTCCTGGACCGCAG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGCTCAAGATGCCAGGTaGGGCAATGTACTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSAQDAR*GNVLSH
Trigger: GTGACTCAGTACATTGCCCCACCTGGCATCTTGAGC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTCTTATGGTTCCCAATaGCTCAGTTTGCACAGATAT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLASYGSQ*LSLHRY
Trigger: ATATCTGTGCAAACTGAGCCATTGGGAACCATAAGA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCATGGAGTACTTTCTGTaGACTTATGTCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGMEYFL*TYVIRE
Trigger: CTCCCTGATGACATAAGTCCACAGAAAGTACTCCAT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGACTTTCGTCTGCTGTTaGACTCAGAGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVTFVCC*TQRLGV
Trigger: GACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCTCAGGAGGGGGATTTaGCAGTGTTCTCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSLRRGI*QCSLHF
Trigger: AAAGTGAAGAGAACACTGCCAAATCCCCCTCCTGAG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATTTTGGCTCGAGCCATaGTATTGGTTCTGCACATTC +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLFWLEP*YWFCTF
Trigger: GAATGTGCAGAACCAATACCATGGCTCGAGCCAAAA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTGTCCTGGAGAATTTTaGCTCGAGCCATGGTATTGG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSCPGEF*LEPWYW
Trigger: CCAATACCATGGCTCGAGCCAAAATTCTCCAGGACA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGCTCCAAATACAATGTaGTTTGCCGAGGCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGAPNTM*FAEAFV
Trigger: AACAAAAGCCTCGGCAAACCACATTGTATTTGGAGC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGATTCTTCCTCTACTCTaGCTGATTGGTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWILPLL*LIGKLV
Trigger: CACCAGCTTACCAATCAGCCAGAGTAGAGGAAGAAT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTACCAGTGGGGACTGCTaGAGTGAGACTTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFTSGDC*SETFCS
Trigger: GCTGCAGAAAGTCTCACTCCAGCAGTCCCCACTGGT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGATCACAGAGGGCTTTaGGGACTGCTGGCTGTTTTG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSDHRGL*GLLAVL
Trigger: CAAAACAGCCAGCAGTCCCCAAAGCCCTCTGTGATC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTCTTCCAGGTGGGTCTaGGCGACACTGGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVSSRWV*ATLVLL
Trigger: AAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCAAGTGATAGGCTTTaGGGACCAAGGAAACATCAT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWASDRL*GPRKHH
Trigger: ATGATGTTTCCTTGGTCCCCAAAGCCTATCACTTGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
3UTR CAA 72 bp ATTAGGGATGAGAGCTTTAAATTTGGGGGCACGTTCTaGCTGTGTGCTTTGAACAGGGCCTTTCTGCTCACC +
Preference number: 4 (lower is better)
Translates to: IRDESFKFGGTF*LCALNRAFLLT
Trigger: GGTGAGCAGAAAGGCCCTGTTCAAAGCACACAGCAAGAACGTGCCCCCAAATTTAAAGCTCTCATCCCTAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGACTGCCTCGGAGTCTaGTATCAAATCAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSDCLGV*YQIKRV
Trigger: AACCCTTTTGATTTGATATCAGACTCCGAGGCAGTC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGCTGGAGTTGGGTGTTaGGGCTGGGGCTTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVAGVGC*GWGFAG
Trigger: TCCAGCAAAGCCCCAGCCTCAACACCCAACTCCAGC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAGAAGGTTGTTGAGCTaGAGGTTTTCCCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPRRLLS*RFSQAW
Trigger: CCAGGCCTGGGAAAACCTTCAGCTCAACAACCTTCT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGATTTAGAAGGTTGTTaGGCTGAAGGTTTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSDLEGC*AEGFPR
Trigger: CCTGGGAAAACCTTCAGCTCAACAACCTTCTAAATC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAAACAGAGCCACTCTTTaGTCTCAGTTAAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLNRATL*SQLSED
Trigger: ATCCTCACTTAACTGAGATCAAAGAGTGGCTCTGTT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTGTTGCTGGCTGTACTaGGGCAGCCTTTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSCCWLY*GSLWGW
Trigger: CCAACCCCAAAGGCTGCCTCAGTACAGCCAGCAACA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCAAGATGGGCTATCTGTaGGTGTCTCTGTCGTCTTCG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSKMGYL*VSLSSS
Trigger: CGAAGACGACAGAGACACTCACAGATAGCCCATCTT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCATTCTGTGCAGGTGTTaGAGTTGGGAGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSILCRC*SWEDPE
Trigger: CTCAGGATCCTCCCAACTTCAACACCTGCACAGAAT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGCTGTTGGTGTTTTCTaGGGTGGGGGTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSAVGVF*GGGSAG
Trigger: CCCTGCAGAACCCCCACCTCAGAAAACACCAACAGC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATCGGGAATTTGTACGTaGGCTTTAAGTAGATCACGT +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLSGICT*ALSRSR
Trigger: ACGTGATCTACTTAAAGCTCACGTACAAATTCCCGA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCAGGCTGCCATCTACTaGTCCATTGTATGTGTCCTC +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSQAAIY*SIVCVL
Trigger: GAGGACACATACAATGGATCAGTAGATGGCAGCCTG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCATTGCATCTGTTGTATaGATGCCAGATAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGIASVV*MPDKSL
Trigger: CAGGGATTTATCTGGCATTCATACAACAGATGCAAT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGGCATTGGCTGGCTTTaGTGCAGGGCTGATAATGAA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSGIGWL*CRADNE
Trigger: TTCATTATCAGCCCTGCATCAAAGCCAGCCAATGCC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGAGAGCTTCAGCCTCTTaGGCTTTCAATCTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWRASAS*AFNLSD
Trigger: ATCACTAAGATTGAAAGCTCAAGAGGCTGAAGCTCT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTTACCTGAAACTGTGTaGTCCTTAGAGTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLPETV*SLESLV
Trigger: AACCAGAGACTCTAAGGATCACACAGTTTCAGGTAA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCAGTCTGACAACATATTaGGGTCCAGTCTTACACATA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGSLTTY*GPVLHI
Trigger: TATGTGTAAGACTGGACCTCAATATGTTGTCAGACT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACGTGGCTTCTGCTTTTaGTCACAGAGGGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLRGFCF*SQRALG
Trigger: CCCCAAAGCCCTCTGTGATCAAAAGCAGAAGCCACG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTTTGGCCCAGGCTGCTaGAATGAGGTCTTCTCTAAG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSFGPGC*NEVFSK
Trigger: CTTAGAGAAGACCTCATTGCAGCAGCCTGGGCCAAA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTGAGGCTGGGGCTTTaGTGGGGCTGGCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLRLGL*WGWLLR
Trigger: CCTCAACAGCCAGCCCCAGCAAAGCCCCAGCCTCAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTGAGGCTGGGGCTTTaGTGGAGTTGGCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLRLGL*WSWLLR
Trigger: CCTCAACAGCCAACTCCAGCAAAGCCCCAGCCTCAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTGCTGGCGCCTGTGCTaGAGAAGTTGGTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSCWRLC*RSWWCL
Trigger: CAAGCACCACCAACTTCTGCAGCACAGGCGCCAGCA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGCCTTTGGGGTTGGCTaGGGTGAGGATGGGATTGCT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSAFGVG*GEDGIA
Trigger: AGCAATCCCATCCTCACCGCAGCCAACCCCAAAGGC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTCTGAACTGGATCCTTaGTCTCAGAAGTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFSELDP*SQKWAQ
Trigger: CTGGGCCCACTTCTGAGAGCAAGGATCCAGTTCAGA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAACCTGTGCCGAGCTTTaGGCTGCTGCTTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLTCAEL*AAACFL
Trigger: GAGAAAGCAAGCAGCAGCGCAAAGCTCGGCACAGGT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTTCGTCTCGTTCATTTaGAGCTGGAAAAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAFVSFI*SWKSFI
Trigger: TATAAAGCTTTTCCAGCTGCAAATGAACGAGACGAA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCCCCAGTTTCTTTCTTaGCTTTTATCAACTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAPQFLS*LLSTPF
Trigger: AAAAGGAGTTGATAAAAGGCAAGAAAGAAACTGGGG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAGGTGGAGTCATTCTTaGTGTGGAATACTGCGGGGT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVRWSHS*CGILRG
Trigger: ACCCCGCAGTATTCCACAGCAAGAATGACTCCACCT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTCAGCAAAGCGTTGTTaGTTAATTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGSAKRC*LIFSSS
Trigger: GGAACTGGAGAAAATTAAGCAACAACGCTTTGCTGA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCCCATCTCGTCATACTaGCCCCGAACTTTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFPISSY*PRTLAP
Trigger: TGGAGCTAAAGTTCGGGGGCAGTATGACGAGATGGG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGGCTGTCTTAGGGCTTaGCGGGGGAACTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLGCLRA*RGNFSH
Trigger: ATGGCTAAAGTTCCCCCGGCAAGCCCTAAGACAGCC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTGGTATTTCCTAACGTaGCCAGTCCTGACCCAAGTG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVWYFLT*PVLTQV
Trigger: CACTTGGGTCAGGACTGGGCACGTTAGGAAATACCA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAATGACCAGTGGGGACTaGTGGAGTGAGACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPMTSGD*WSETFC
Trigger: GCAGAAAGTCTCACTCCAGCAGTCCCCACTGGTCAT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGAAGGTGACCCTGGCTaGCCGGGGCTGGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQEGDPG*PGLGTE
Trigger: TTCTGTTCCCAGCCCCGGGCAGCCAGGGTCACCTTC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCGCCGTGCTTCTTTTTaGTTACTGAAGGTGACCCTG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSRRASF*LLKVTL
Trigger: CAGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGGGGACCAGGTTTCTTaGTTGAAGAATATGTATTAT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLAGDQVS*LKNMYY
Trigger: ATAATACATATTCTTCAAGCAAGAAACCTGGTCCCC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCTTGTACTCAACACTTaGATTCTGGACAACCATGAC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLVLNT*ILDNHD
Trigger: GTCATGGTTGTCCAGAATGCAAGTGTTGAGTACAAG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATGGGCTGGACTCTGCTaGGAAGGTTTTGCTGTGCCA +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLWAGLC*EGFAVP
Trigger: TGGCACAGCAAAACCTTCCCAGCAGAGTCCAGCCCA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTTTTGCTTGCTGAGCTaGTGTTTGGGCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSFCLLS*CLGWTL
Trigger: CAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTGTGGGCCAGGCTGTTaGGCTGGGAGTTTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSCGPGC*AGSLAV
Trigger: GACAGCTAAACTCCCAGCCCAACAGCCTGGCCCACA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAGGCTGTGGCTTTGCTaGGGTGGGCTGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQRLWLC*GGLLRL
Trigger: CAGCCTCAGCAGCCCACCCCAGCAAAGCCACAGCCT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGGCTGTGGCTTTGCTaGGGTGGGCTGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRLWLC*GGLLRL
Trigger: CAGCCTCAGCAGCCCACCCCAGCAAAGCCACAGCCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGTACAGGTGATTTGCTaGCTGTTGCTGGCTGTACTG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSVQVIC*LLLAVL
Trigger: CAGTACAGCCAGCAACAGCCAGCAAATCACCTGTAC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTGCCACTGGAGGCTGTaGGGCTGTAGCCGGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTCHWRL*GCSRGR
Trigger: CCTACCCCGGCTACAGCCCCACAGCCTCCAGTGGCA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGCGGACCTGTGGACTTaGGTGGTCCCTGAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQADLWT*VVPEQP
Trigger: TGGCTGCTCAGGGACCACCCAAGTCCACAGGTCCGC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACTAAGTCTGAGGGGCTaGAAGGGCTGCTTTCTTGCG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLSLRG*KGCFLA
Trigger: CGCAAGAAAGCAGCCCTTCCAGCCCCTCAGACTTAG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACCTGAGCTTCCAAAATaGACAGTACTGTACTTTCCA +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLPELPK*TVLYFP
Trigger: TGGAAAGTACAGTACTGTCCATTTTGGAAGCTCAGG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTGTCAAAGTCCAGAGTaGACTCAGCCATGTCATCCC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVCQSPE*TQPCHP
Trigger: GGGATGACATGGCTGAGTCCACTCTGGACTTTGACA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACAACTTGTAATGGCTTaGGCAGCAGAAGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLQLVMA*AAEESV
Trigger: AACAGATTCTTCTGCTGCCCAAGCCATTACAAGTTG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAGGCTCTGGAGGAATTaGTATGGAAACACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVRLWRN*YGNTPG
Trigger: CCCAGGAGTGTTTCCATACCAATTCCTCCAGAGCCT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGACTTGGCGTGTTTCTaGGTATGGGCCTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSDLACF*VWACSL
Trigger: AAGACTACAGGCCCATACCCAGAAACACGCCAAGTC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCATACGATCTAGGCATTaGCTGGCTTTGATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSIRSRH*LALMQG
Trigger: GCCCTGCATCAAAGCCAGCCAATGCCTAGATCGTAT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATGTCTCATCATGAACTaGGCCTGCCGCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPCLIMN*ACRSSS
Trigger: AGAGGAAGAGCGGCAGGCCCAGTTCATGATGAGACA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTGTTGTTGCAGCTGTTaGATCTGCTCAAGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWCCCSC*ICSSCN
Trigger: GTTACAACTTGAGCAGATCCAACAGCTGCAACAACA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCTCAAGATGCCAGGTaGGGCAATGTACTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFAQDAR*GNVLSH
Trigger: GTGACTCAGTACATTGCCCCACCTGGCATCTTGAGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTCTTCGTCATCAGTTTaGACACTGGTATCAACGCTC +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSSSSSV*TLVSTL
Trigger: GAGCGTTGATACCAGTGTCCAAACTGATGACGAAGA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTCTTATGGTTCCCAATaGCTCAGTTTGCACAGATAT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGSYGSQ*LSLHRY
Trigger: ATATCTGTGCAAACTGAGCCATTGGGAACCATAAGA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGGAGACGATCTGTTTTaGACAGATCCTTTTCATGGA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWGDDLF*TDPFHG
Trigger: TCCATGAAAAGGATCTGTCCAAAACAGATCGTCTCC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTAGAGCCGACCGGATaGTATTTCCTAACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFVEPTG*YFLTCP
Trigger: TGGGCACGTTAGGAAATACCATCCGGTCGGCTCTAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAATTCTGGGCCACAATTaGTATTCTTCCTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLILGHN*YSSSTL
Trigger: CAGAGTAGAGGAAGAATACCAATTGTGGCCCAGAAT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTTGTATCTGCAGATATaGGCGGCAAAGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLYLQI*AAKVQL
Trigger: CAGCTGGACCTTTGCCGCCCATATCTGCAGATACAA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTCAGACATAGCATGTTaGAAGTCATCCATGATGAAT +
Preference number: 4 (lower is better)
Translates to: CSPPSGLTGPSDITFLRASDIAC*KSSMMN
Trigger: ATTCATCATGGATGACTTCCAACATGCTATGTCTGA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCCAACCGAGACTCCCTaGGTTTATCAAACCAATCCG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSPTETP*VYQTNP
Trigger: CGGATTGGTTTGATAAACCCAGGGAGTCTCGGTTGG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTGCCGCCAGCTGCTTaGGATCCACGCCTGGAGACT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLPPAA*DPRLET
Trigger: AGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATGGATCCTGCCGATGTaGGACCTGAGTGAGCATGAG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLWILPM*DLSEHE
Trigger: CTCATGCTCACTCAGGTCCCACATCGGCAGGATCCA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACTGGCTGCCCGGGGCTaGGAACAGAACTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKLAARG*EQNWIL
Trigger: CAGGATCCAGTTCTGTTCCCAGCCCCGGGCAGCCAG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTCCAAGGAAGTCGTTaGATGAGAATCTATCATAAT +
Preference number: 4 (lower is better)
Translates to: SDITFLRASWLWSWLPLALQGSR*MRIYHN
Trigger: ATTATGATAGATTCTCATCCAACGACTTCCTTGGAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTGTGGGATTTCTCAATaGTGGGAACCTGCATATCCT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSCGISQ*WEPAYP
Trigger: AGGATATGCAGGTTCCCACCATTGAGAAATCCCACA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGTCTCTGCAGGCCGGTaGTTGGTAGGCTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLVSAGR*LVGFVG
Trigger: ACCAACAAAGCCTACCAACCACCGGCCTGCAGAGAC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTTTGCGTCTTTTACTTaGTTGAATGCGGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWFASFT*LNAELL
Trigger: CAGCAACTCCGCATTCAACCAAGTAAAAGACGCAAA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGGTTGCTGTGGAGCCTaGCTACTATCCAACTCTTGT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPGCCGA*LLSNSC
Trigger: ACAAGAGTTGGATAGTAGTCAGGCTCCACAGCAACC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAAGGCAGCTTCTGCTCTaGCCTAAACGTGTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLRQLLL*PKRVRS
Trigger: ACTACGGACACGTTTAGGTCAGAGCAGAAGCTGCCT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCCTGTCCCTGCTGGTTaGGCTGGGGACTTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWPVPAG*AGDFAG
Trigger: GCCAGCAAAGTCCCCAGCTCAACCAGCAGGGACAGG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTACCGTTTGGCTTATTaGTTTAGAAGGTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWYRLAY*FRRLLS
Trigger: GCTCAACAACCTTCTAAATCAATAAGCCAAACGGTA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGCCTGTGCCTGCACTTaGGAGCTCAGAATAGCAGGC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVACACT*ELRIAG
Trigger: GCCTGCTATTCTGAGCTCTCAAGTGCAGGCACAGGC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGGCTCCTCCTTCTTCTaGACTGGATCCTTGCTCTCA +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLGSSFF*TGSLLS
Trigger: TGAGAGCAAGGATCCAGTTCAGAAGAAGGAGGAGCC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAAACAAAGCCATTCTTaGATCTCAGTCAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVKQSHS*ISVRWG
Trigger: GCCCCACCTGACTGAGATTCAAGAATGGCTTTGTTT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGGATGCTTTGGGTCCTaGGGATGCAGGTGGCATTTT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLGCFGS*GCRWHF
Trigger: AAAATGCCACCTGCATCCTCAGGACCCAAAGCATCC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATCCTTGGGTAACGTCTaGGGTGTGGCGCCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKSLGNV*GVAPGR
Trigger: TCTGCCAGGCGCCACACCTCAGACGTTACCCAAGGA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAAAAGTTGTCTTTTTCTaGGAGGATTCTGCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLKVVFF*EDSAEY
Trigger: GTACTCTGCAGAATCCTCTCAGAAAAAGACAACTTT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGGGACGTGCCAGGAGTaGAGCTGGATGCATGGAGAC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLGTCQE*SWMHGD
Trigger: GTCTCCATGCATCCAGCTTCACTCCTGGCACGTCCC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGTTCATCTTGCCTGGTaGGCAGGCTGCCATCTACTG +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSVHLAW*AGCHLL
Trigger: CAGTAGATGGCAGCCTGCTCACCAGGCAAGATGAAC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCATGGCTTTCTGGAATaGTATAAGAGCTTGAAACAA +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGHGFLE*YKSLKQ
Trigger: TTGTTTCAAGCTCTTATATCATTCCAGAAAGCCATG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCTTCTTTTGAACCATaGTCTTTTCTTGTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWASFEP*SFLVLG
Trigger: TCCGAGAACAAGAAAAGATCATGGTTCAAAAGAAGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGGAGTTGGGGTAGGTTaGGCCTGGGGTGTGAAGGAC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLGVGVG*AWGVKD
Trigger: GTCCTTCACACCCCAGGCTCAACCTACCCCAACTCC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGAGAGACCAGCAAGGTaGTCTAAGCTCTCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSERPAR*SKLSVP
Trigger: GGGCACAGAGAGCTTAGATCACCTTGCTGGTCTCTC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCAGGTCTCTACTTTCTTaGATAGGTGAAAACTTAGAC +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGRSLLS*IGENLD
Trigger: GTCTAAGTTTTCACCTATTCAAGAAAGTAGAGACCT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGAGTCTGACAACATATTaGGGTCCAGTCTTACACATA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWSLTTY*GPVLHI
Trigger: TATGTGTAAGACTGGACCTCAATATGTTGTCAGACT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACTGCTGGGAAGGTTTTaGTGTGCCAGGGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLLGRF*CARGLW
Trigger: CCACAAGCCCCTGGCACAGCAAAACCTTCCCAGCAG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATGTCACTGGAGGTTGTaGTGGGGACTTCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVCHWRL*WGLPCP
Trigger: GGGACAGGGAAGTCCCCAGCACAACCTCCAGTGACA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGAAGTTGGTGGTGCTTaGAGAGGTCTTCCTGTTACC +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPEVGGA*RGLPVT
Trigger: GGTAACAGGAAGACCTCTGCAAGCACCACCAACTTC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGCAGAAGTTGGTGGTaGTTGCAGAGGTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFCRSWW*LQRSSC
Trigger: ACAGGAAGACCTCTGCAAGCACCACCAACTTCTGCA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAACGGTACAGGTGATTTaGTGGCTGTTGCTGGCTGTA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPTVQVI*WLLLAV
Trigger: TACAGCCAGCAACAGCCAGCAAATCACCTGTACCGT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGCAGGTGCTGATGGGTaGGGACCTGTGGACTTGGGT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQAGADG*GPVDLG
Trigger: ACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTCTCTCTGCTTCTCTTaGTCTTTTAATAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGSLCFS*SFNNSS
Trigger: AGAGGAGTTATTAAAAGAGCAAGAGAAGCAGAGAGA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTGCTCTCTTCCTCTCTaGTGCATAAATCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWCSLPL*CINPFC
Trigger: ACAAAATGGATTTATGCAGCAGAGAGGAAGAGAGCA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATGGAGCCACTGGAGCTaGAGCTGCCAACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPWSHWS*SCQLSF
Trigger: AAAAGAAAGTTGGCAGCTGCAGCTCCAGTGGCTCCA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAAATTGGAGGTTTGCTTaGCTCTGGTCTATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLNWRFA*LWSMCK
Trigger: TTTACACATAGACCAGAGGCAAGCAAACCTCCAATT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATTTGATGTAGTAAGCTaGAGTGGTGATGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLFDVVS*SGDVTA
Trigger: TGCAGTAACATCACCACTGCAGCTTACTACATCAAA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACAGGCTGCTGTGCTGTaGAGCTCCGTCCAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVQAAVL*SSVQKA
Trigger: TGCCTTTTGGACGGAGCTGCACAGCACAGCAGCCTG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCGCTCCAAGTCAAGTTaGTGTTGTTGTTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSRSKSS*CCCLSS
Trigger: TGAAGACAAACAACAACAGCAACTTGACTTGGAGCG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTATTCCGTGGATCATCTaGCATGCTTTCCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFIPWII*HAFPHL
Trigger: GAGATGGGGGAAAGCATGGCAGATGATCCACGGAAT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAAGCAGTGCCCATGGTaGTGTAAGTTGACTGTGTTC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVKQCPW*CKLTVF
Trigger: GAACACAGTCAACTTACAGCACCATGGGCACTGCTT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAGTCTGGAGGAAGTCTaGAAAGGCGCTAGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSLEEV*KGARKS
Trigger: AGACTTCCTAGCGCCTTTGCAGACTTCCTCCAGACT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTCCATTCCAAAACTTaGATCCCTTCTATAAGTTTC +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASFHSKT*IPSISF
Trigger: GAAACTTATAGAAGGGATGCAAGTTTTGGAATGGAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGAAGGTGACCCTGGCTaGCCGGGGCTGGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTEGDPG*PGLGTE
Trigger: TTCTGTTCCCAGCCCCGGGCAGCCAGGGTCACCTTC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGACTGGAGTGAGACTTaGCATGCTCAATGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVDWSET*HAQCFQ
Trigger: CTGAAAGCATTGAGCATGGCAAGTCTCACTCCAGTC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGCTGGCCCTGGTTGCTaGACTGTGGCCTTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQAGPGC*TVAFAG
Trigger: ACCTGCAAAGGCCACAGTCCAGCAACCAGGGCCAGC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACTTAGCTGCAGTCTGTaGGCCAGGCTGTTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKLSCSL*ARLLGW
Trigger: CCAGCCCAACAGCCTGGCCCACAGACTGCAGCTAAG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGGCTGGGGCTTTGCTaGAGTTGGGTGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRLGLC*SWVLRL
Trigger: CAGCCTCAGCACCCAACTCCAGCAAAGCCCCAGCCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAAGGCTGGGGCTTTGCTaGAGTTGGGTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVRLGLC*SWVLRL
Trigger: CAGCCTCAACACCCAACTCCAGCAAAGCCCCAGCCT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATGGCTGTTGAGGCTGTaGCTTTGCTGGGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKWLLRL*LCWGGL
Trigger: CAGCCCACCCCAGCAAAGCCACAGCCTCAACAGCCA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGGCTGGGGCTTTGCTaGGGTGGGCTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRLGLC*GGLLRL
Trigger: CAGCCTCAACAGCCCACCCCAGCAAAGCCCCAGCCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAAGGTTTTCCCAGGCCTaGCTGTTGAGGCTGGGGCTT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVRFSQA*LLRLGL
Trigger: AAGCCCCAGCCTCAACAGCCAGGCCTGGGAAAACCT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTGGGGCTGTCCTGTTTaGATGGAAGTTCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVWGCPV*MEVPSL
Trigger: CAAAGAAGGAACTTCCATCCAAACAGGACAGCCCCA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTTGTGGGCTGTGATTTaGGGGCATCAGCGATACCCC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSLWAVI*GHQRYP
Trigger: GGGGTATCGCTGATGCCCCCAAATCACAGCCCACAA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACTTCTTTTCTTCAAGTaGTGGCGCTTCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPLLFFK*WRFCSR
Trigger: CCTGCTGCAGAAGCGCCACCACTTGAAGAAAAGAAG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGTCACTCAGGCCTTGTaGGCTCTTGGGTTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSVTQAL*ALGLLR
Trigger: TCTCAGCAACCCAAGAGCCCACAAGGCCTGAGTGAC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTCTGTTGAAAAATGTTaGGTTATCTTAACATCTGGG +
Preference number: 4 (lower is better)
Translates to: SPPSGLTGPSDITFLRASSVEKC*VILTSG
Trigger: CCCAGATGTTAAGATAACCCAACATTTTTCAACAGA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACGTAACAATAGCAGTTaGAGCCACTGGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLRNNSS*SHWSCS
Trigger: GCTGCAGCTCCAGTGGCTCCAACTGCTATTGTTACG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAGCAGAAGAATCTGTTaGAGTCCCAGGTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSRRIC*SPRFRG
Trigger: CCCTCTGAACCTGGGACTCCAACAGATTCTTCTGCT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAGCAGAAGAATCTGTTaGAGTCCCAGGTTCAGAGGG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFSRRIC*SPRFRG
Trigger: CCCTCTGAACCTGGGACTCCAACAGATTCTTCTGCT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGATGTTACTGCCTGAGTaGAAGGACCTAATGATAAGT +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWMLLPE*KDLMIS
Trigger: ACTTATCATTAGGTCCTTCCACTCAGGCAGTAACAT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGACTTGGCGTGTTTCTaGGTATGGGCCTGTAGTCTT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFDLACF*VWACSL
Trigger: AAGACTACAGGCCCATACCCAGAAACACGCCAAGTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTATACGATCTAGGCATTaGCTGGCTTTGATGCAGGGC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFIRSRH*LALMQG
Trigger: GCCCTGCATCAAAGCCAGCCAATGCCTAGATCGTAT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATGGTGGCATCTTCAGTaGCCCAAAACTGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLWWHLQ*PKTDCP
Trigger: AGGGCAGTCAGTTTTGGGCCACTGAAGATGCCACCA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTACACTGGAGACTTTaGAAGGGGGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLHWRL*KGVWSC
Trigger: ACAAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTGGAAGGTGTTCTTATaGTTCCCAATGGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSWKVFL*FPMAQF
Trigger: AAACTGAGCCATTGGGAACCATAAGAACACCTTCCA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACTTTGGGTGGAGATGTaGCACCCATATATGGAGGGC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLWVEM*HPYMEG
Trigger: GCCCTCCATATATGGGTGCCACATCTCCACCCAAAG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTTTCTTGTCTTTGGGTaGAGATGTGGCACCCATATA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSFLVFG*RCGTHI
Trigger: TATATGGGTGCCACATCTCCACCCAAAGACAAGAAA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGAACTTTAGCCATATCTaGATGGAGTACTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWNFSHI*MEYFLW
Trigger: CCACAGAAAGTACTCCATCCAGATATGGCTAAAGTT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGGATGGCTGTGGAGTTaGGGTAGGTTGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLGWLWS*GRLSLG
Trigger: CCCCAGGCTCAACCTACCCCAACTCCACAGCCATCC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGATTATCAGTAGAAACTaGAGCAATCATCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWIISRN*SNHQGL
Trigger: CAACCCCTGATGATTGCTCCAGTTTCTACTGATAAT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAATTATCAGTAGAAACTaGAGCAATCATCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLIISRN*SNHQGL
Trigger: CAACCCCTGATGATTGCTCCAGTTTCTACTGATAAT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACATAGCTATGCAGTCTaGAGGAAGTCTGCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPHSYAV*RKSAKA
Trigger: CGCCTTTGCAGACTTCCTCCAGACTGCATAGCTATG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCTCCCACTGCTGTATaGCTTATCTGCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFAPTAV*LICFIL
Trigger: CAGGATGAAGCAGATAAGCCATACAGCAGTGGGAGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTCCGATCCAGACCATaGCCATTTTCCAACCGAGAC +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPFRSRP*PFSNRD
Trigger: GTCTCGGTTGGAAAATGGCCATGGTCTGGATCGGAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCTGGCTGCCCGGGGCTaGGAACAGAACTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLAARG*EQNWIL
Trigger: CAGGATCCAGTTCTGTTCCCAGCCCCGGGCAGCCAG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCTGGCTGCCCGGGGCTaGGAACAGAACTGGATCCTG +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTLAARG*EQNWIL
Trigger: CAGGATCCAGTTCTGTTCCCAGCCCCGGGCAGCCAG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGCTGGCTGTTTTGACTaGAGTGAGACTTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPAGCFD*SETCHA
Trigger: AGCATGGCAAGTCTCACTCCAGTCAAAACAGCCAGC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCTGGCTGTTTTGACTaGAGTGAGACTTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFAGCFD*SETCHA
Trigger: AGCATGGCAAGTCTCACTCCAGTCAAAACAGCCAGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTCGGGGAAGATACCGTaGCTTCTGCTTTTGATCACA +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVSGKIP*LLLLIT
Trigger: TGTGATCAAAAGCAGAAGCCACGGTATCTTCCCCGA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTTCAGCTGCGGCTATaGCCGCCCCTGCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLQLRL*PPLHLP
Trigger: TGGAAGATGCAGGGGCGGCCATAGCCGCAGCTGAAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CAA 72 bp TCTAGTTACAACCTAGGAGTTTCGTCAGCTGCAAACTaGGCACACTGGCAGCATCTTTGTTTCTCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: SSYNLGVSSAAN*AHWQHLCFSRG
Trigger: TCCCCTTGAGAAACAAAGATGCTGCCAGTGTGCCAAGTTTGCAGCTGACGAAACTCCTAGGTTGTAACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGCTGGAGTTGGCTGTTaGGGCTGTGGCTTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWAGVGC*GCGFAG
Trigger: CCCAGCAAAGCCACAGCCTCAACAGCCAACTCCAGC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTACACACGGTGCTTTaGCACTCAGTACATGTGTTA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLHTVL*HSVHVL
Trigger: TAACACATGTACTGAGTGTCAAAGCACCGTGTGTAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGGTGGGAAACTCTGTaGAGTTTTGGCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFWWETL*SFGRVC
Trigger: ACAGACTCTGCCAAAACTTCACAGAGTTTCCCACCA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGACTTGGGTGGTCCCTaGGCAGCCAGAGTCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSDLGGP*AARVWD
Trigger: ATCCCAGACTCTGGCTGCTCAGGGACCACCCAAGTC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTACAAGTGTGCTTGCCTaGGCTTCCAAAATGGACAGT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFTSVLA*ASKMDS
Trigger: ACTGTCCATTTTGGAAGCTCAGGCAAGCACACTTGT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTCTTCCCCCGAGCCTTaGCTGTCTTCCTGCTTATAC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSSSPEP*LSSCLY
Trigger: GTATAAGCAGGAAGACAGTCAAGGCTCGGGGGAAGA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCAAATCCTTCTGGGTCTaGTTCTATGCTAGGCGAGTA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSKSFWV*FYARRV
Trigger: TACTCGCCTAGCATAGAATCAGACCCAGAAGGATTT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATATGTGGGCTTTTCCTaGCCCAAGATCTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPYVGFS*PKISPD
Trigger: ATCTGGAGAGATCTTGGGTCAGGAAAAGCCCACATA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAAGTCCAGTTGGAATTaGAGAAGGCTTAGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFKSSWN*RRLRRD
Trigger: GTCCCTCCTAAGCCTTCTTCAATTCCAACTGGACTT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCTTGGGGTCAGACATTaGACGCTGCATCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSLGVRH*TLHHLG
Trigger: GCCAAGATGATGCAGCGTTCAATGTCTGACCCCAAG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGTCTGCAGATATGCTTaGTATTGGACTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVVCRYA*YWTACH
Trigger: ATGGCAAGCAGTCCAATATCAAGCATATCTGCAGAC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAGCATGGTAATAATGTaGGAGACCAGCAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVSMVIM*ETSKVI
Trigger: GATCACCTTGCTGGTCTCTCACATTATTACCATGCT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAGTTCTGGCAGAAGATaGAGAATGGCCAAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVSSGRR*RMAKRD
Trigger: GTCTCTTTTGGCCATTCTTCATCTTCTGCCAGAACT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTGGACTTTCTTCTTCTaGATTCTGGGCCACAATTGG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVWTFFF*ILGHNW
Trigger: CCAATTGTGGCCCAGAATTCAGAAGAAGAAAGTCCA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCTGAGGGGTCTAGAGTaGACCAGTCTTTCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSLRGLE*TSLSGS
Trigger: ACTGCCAGAAAGACTGGTTCACTCTAGACCCCTCAG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGCTTCCCCACTTTGCTaGTTAATGATGCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSASPLC*LMMLCT
Trigger: AGTACAGAGCATCATTAATCAGCAAAGTGGGGAAGC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATGGGGACTGCTGGAGTaGGACTTTCTGCAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLWGLLE*DFLQLC
Trigger: GCAGAGCTGCAGAAAGTCTCACTCCAGCAGTCCCCA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTAAGGAAGTCGTTGGATaGGAATCTATCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSKEVVG*ESIIIP
Trigger: TGGGATTATGATAGATTCTCATCCAACGACTTCCTT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCTGGACTGTGGCCTTTaGAGGTCCAGGCTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTLDCGL*RSRLLG
Trigger: GCCCAACAGCCTGGACCTGCAAAGGCCACAGTCCAG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATGTCACTGGAGGTTGTaGTGGGGACTTCCCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKCHWRL*WGLPCP
Trigger: GGGACAGGGAAGTCCCCAGCACAACCTCCAGTGACA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTGAGGCTGGGGCTTTaGTGGAGTTGGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKLRLGL*WSWVLR
Trigger: CCTCAGCACCCAACTCCAGCAAAGCCCCAGCCTCAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTGAGGCTGGGGCTTTaGTGGAGTTGGGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLRLGL*WSWVLR
Trigger: CCTCAACACCCAACTCCAGCAAAGCCCCAGCCTCAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATTGAGGCTGGGGCTTTaGTGGAGTTGGGTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLRLGL*WSWVLR
Trigger: CCTCAACACCCAACTCCAGCAAAGCCCCAGCCTCAA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATGCAGAAGTTGGTGGTaGTTGCAGAGGTCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLCRSWW*LQRSSC
Trigger: ACAGGAAGACCTCTGCAAGCACCACCAACTTCTGCA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGCCTTTGGGGTTGGCTaGGGTGAGGATGGGATTGCT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKAFGVG*GEDGIA
Trigger: AGCAATCCCATCCTCACCGCAGCCAACCCCAAAGGC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACTTTGGTTCAACATCTaGAACAGGGGCCTTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPLWFNI*NRGLCL
Trigger: CAAGCAAAGGCCCCTGTTGCAGATGTTGAACCAAAG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTGTCACTTGAGCCTGTaGCTGCACTTGAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSCHLSL*LHLRAQ
Trigger: CTGAGCTCTCAAGTGCAGGCACAGGCTCAAGTGACA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGGCCTTCCTTTGCAGTaGCTTCTGCCTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQGLPLQ*LLPEAV
Trigger: CACAGCCTCAGGCAGAAGGCACTGCAAAGGAAGGCC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACTCCTCCATTTCTGCTaGCTGGCGCAATTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLLHFC*LAQFFC
Trigger: ACAGAAGAATTGCGCCAGGCAGCAGAAATGGAGGAG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACCATTTTGTTCATCTTaGCTGGTGAGCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLPFCSS*LVSRLP
Trigger: TGGCAGCCTGCTCACCAGGCAAGATGAACAAAATGG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCCTCTCAGGTTTAGTTaGTACAGATTCTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSPLRFS*YRFCDR
Trigger: TCTATCACAGAATCTGTAGCAACTAAACCTGAGAGG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATCCCCTGAGATATGGTaGTGTCAGTCCATCCATTTG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSPEIW*CQSIHL
Trigger: CAAATGGATGGACTGACAGCACCATATCTCAGGGGA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTCCCCTGAGATATGGTaGTGTCAGTCCATCCATTTG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFSPEIW*CQSIHL
Trigger: CAAATGGATGGACTGACAGCACCATATCTCAGGGGA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACAGGCTGCTGTGCTGTaGAGCTCCGTCCAAAAGGCA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLQAAVL*SSVQKA
Trigger: TGCCTTTTGGACGGAGCTGCACAGCACAGCAGCCTG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTTCAGGAAGGGTAGTTaGAGGCTGCTGTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSFRKGS*RLLCCA
Trigger: TGCACAGCACAGCAGCCTGCAACTACCCTTCCTGAA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGGACAATCAAAAGAGTaGTTTCCTCTCCAACCACCT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVGQSKE*FPLQPP
Trigger: AGGTGGTTGGAGAGGAAAGCACTCTTTTGATTGTCC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACTGACCCTCCAAAATTaGCTGTTCAGTGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPLTLQN*LFSGGL
Trigger: CAAACCACCACTGAACAGGCAATTTTGGAGGGTCAG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTGACCCTCCAAAATTaGCTGTTCAGTGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFLTLQN*LFSGGL
Trigger: CAAACCACCACTGAACAGGCAATTTTGGAGGGTCAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACCTGGAACTTTCGTCTaGTGTTGGACTCAGAGGCTT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLPGTFV*CWTQRL
Trigger: AAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTCATCAAGTTCTGCTTaGTTCTTTCTAAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSSSSSA*FFLSLA
Trigger: TGCCAAGCTTAGAAAGAAGCAAGCAGAACTTGATGA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTGCTTGATATTGGACTaGTTGCCATACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSCLILD*LPYCFF
Trigger: AAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCGGCAAAGGTCCAGCTaGAGCCCTGGCCATTCCCAT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWRQRSS*SPGHSH
Trigger: ATGGGAATGGCCAGGGCTGCAGCTGGACCTTTGCCG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGACTTTCTGCAGCTCTaGCGCCAGCTGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQDFLQL*RQLLGI
Trigger: GATCCCAAGCAGCTGGCGGCAGAGCTGCAGAAAGTC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGTCTTCTTCATGAGCTaGTCCATGGAAATACTTTTA +
Preference number: 4 (lower is better)
Translates to: ALPANFTDTATKYYEPGWVFFMS*SMEILL
Trigger: TAAAAGTATTTCCATGGAGCAGCTCATGAAGAAGAC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTACTTGCCATGCTCAATaGTTTCAGTCTGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSTCHAQ*FQSVLS
Trigger: TGAAAGAACAGACTGAAAGCATTGAGCATGGCAAGT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTGGTTTTGCTTTGACTaGGAGATGGTCCATGAGATC +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSWFCFD*EMVHEI
Trigger: GATCTCATGGACCATCTCGCAGTCAAAGCAAAACCA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACTTTCCGGGTTGCTGTaGAGCCTGACTACTATCCAA +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLSGLL*SLTTIQ
Trigger: TTGGATAGTAGTCAGGCTCCACAGCAACCCGGAAAG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGCAGGTCCAGGCTGTTaGGCTACAGGTTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVAGPGC*ATGFAC
Trigger: GCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTACCAGGCTGCTGAGCTaGTGTTTTTCCAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSTRLLS*CFSRSR
Trigger: TCTGGACCTGGAAAAACACCAGCTCAGCAGCCTGGT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGGCTGGGGCTTTGCTaGAGTTGGGTGCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRLGLC*SWVLRL
Trigger: CAGCCTCAGCACCCAACTCCAGCAAAGCCCCAGCCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGGCTGGGGCTTTGCTaGAGTTGGGTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRLGLC*SWVLRL
Trigger: CAGCCTCAACACCCAACTCCAGCAAAGCCCCAGCCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAGGCTGGGGCTTTGCTaGAGTTGGCTGTTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLRLGLC*SWLLRL
Trigger: CAGCCTCAACAGCCAACTCCAGCAAAGCCCCAGCCT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTTCTTGAGGAGTTGTaGGCTGTGATTTGGGGGCAT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPFLEEL*AVIWGH
Trigger: ATGCCCCCAAATCACAGCCCACAACTCCTCAAGAAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGCTGGCCCAGTCTGTaGATGAGGTGCTTGCTGACC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKSWPSL*MRCLLT
Trigger: GGTCAGCAAGCACCTCATCCACAGACTGGGCCAGCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGAGGACAGGCCGGTTTaGGTTTGGTGGTCTTGTCTG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVEDRPV*VWWSCL
Trigger: CAGACAAGACCACCAAACCCAAACCGGCCTGTCCTC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCGCGTGGGCAGCTGTTaGTGTTTTCTGAGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRVGSC*CFLRWG
Trigger: CCCCCACCTCAGAAAACACCAACAGCTGCCCACGCG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTTTTACCTTTCGCGTaGGCAGCTGTTGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVFLPFA*AAVGVF
Trigger: GAAAACACCAACAGCTGCCCACGCGAAAGGTAAAAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACGCTTCTGCAGCAGGTaGCTTCTTTTCCTTTTTGTC +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPRFCSR*LLFLFV
Trigger: GACAAAAAGGAAAAGAAGCCACCTGCTGCAGAAGCG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAAGCCACTTTGCCTATaGGTCCTTCTTCGGGAATTT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVKPLCL*VLLREF
Trigger: AAATTCCCGAAGAAGGACCCATAGGCAAAGTGGCTT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGCAGATCTTCAGGCCTaGTGTCTGGCTGCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLADLQA*CLAAAL
Trigger: GAGAGCAGCAGCCAGACACCAGGCCTGAAGATCTGC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAATCCCGTGTTTCGGATaGAGTCTGAGTTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPIPCFG*SLSFLL
Trigger: CAGCAGAAAACTCAGACTCCATCCGAAACACGGGAT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACTTTGTGCTCCTTCCTaGAAGGAAAACCTTGTGCGC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLCAPS*KENLVR
Trigger: GCGCACAAGGTTTTCCTTCCAGGAAGGAGCACAAAG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGTAAAAGAGGGCCATaGGACCTGTGCCGAGCTTTG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGKRGP*DLCRAL
Trigger: CAAAGCTCGGCACAGGTCCCATGGCCCTCTTTTACC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACATACCACCATACAATaGCTCTTTTTCAAACACTTC +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLHTTIQ*LFFKHF
Trigger: GAAGTGTTTGAAAAAGAGCCATTGTATGGTGGTATG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTGGGTGAGATTTGGATaGATGGGTAGAAACAGGAAG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSWVRFG*MGRNRK
Trigger: CTTCCTGTTTCTACCCATCCATCCAAATCTCACCCA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACAGGGACTGCTGGCTTaGGGGCAATTGGAGGTTTGC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKQGLLA*GQLEVC
Trigger: GCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAACTCCCGAAATGACTTaGCGTGTTTCTGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLTPEMT*RVSGYG
Trigger: CCCATACCCAGAAACACGCCAAGTCATTTCGGGAGT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGGCGTTTCTTGTCTTTaGGTGGAGATGTGGCACCCA +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSGVSCL*VEMWHP
Trigger: TGGGTGCCACATCTCCACCCAAAGACAAGAAACGCC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGCTGGTTCTAAGGCGTaGCCTGGGGAAAGTGGTGAG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQAGSKA*PGESGE
Trigger: CTCACCACTTTCCCCAGGCCACGCCTTAGAACCAGC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTTTGGCTCGAGCCATaGTATTGGTTCTGCACATTC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVFWLEP*YWFCTF
Trigger: GAATGTGCAGAACCAATACCATGGCTCGAGCCAAAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACTGAGGAGCTGTTCTTaGCCGCTCAATGCCGTGCTG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLRSCS*PLNAVL
Trigger: CAGCACGGCATTGAGCGGCCAAGAACAGCTCCTCAG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTTCTGTTTGTGTTTGTaGTGGTATGAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSFCLCL*WYELAE
Trigger: TTCAGCCAGTTCATACCACCACAAACACAAACAGAA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTATGGGGTCGGGGCTTaGGTGGGAAGAGCGGGTGAT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWYGVGA*VGRAGD
Trigger: ATCACCCGCTCTTCCCACCCAAGCCCCGACCCCATA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGGATGGCTGTGGAGTTaGGGTAGGTTGAGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSGWLWS*GRLSLG
Trigger: CCCCAGGCTCAACCTACCCCAACTCCACAGCCATCC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGCTCCCACTGCTGTATaGCTTATCTGCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLAPTAV*LICFIL
Trigger: CAGGATGAAGCAGATAAGCCATACAGCAGTGGGAGC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCATTCTTCCTCTACTCTaGCTGATTGGTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSILPLL*LIGKLV
Trigger: CACCAGCTTACCAATCAGCCAGAGTAGAGGAAGAAT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGTACACCTTCACAAATaGGTCCGAGTAGCCATTGTT +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSVHLHK*VRVAIV
Trigger: AACAATGGCTACTCGGACCCATTTGTGAAGGTGTAC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTGTGGGATTTCTCAATaGTGGGAACCTGCATATCCT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVCGISQ*WEPAYP
Trigger: AGGATATGCAGGTTCCCACCATTGAGAAATCCCACA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATGGTGGGAAACTCTGTaGAGTTTTGGCAGAGTCTGT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLWWETL*SFGRVC
Trigger: ACAGACTCTGCCAAAACTTCACAGAGTTTCCCACCA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAGGAGTTGTGGGCTGTaGTTTGGGGGCATCAGCGAT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQRSCGL*FGGISD
Trigger: ATCGCTGATGCCCCCAAATCACAGCCCACAACTCCT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGGAGTTGTGGGCTGTaGTTTGGGGGCATCAGCGAT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRSCGL*FGGISD
Trigger: ATCGCTGATGCCCCCAAATCACAGCCCACAACTCCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCCTGTCACAGTTTCTTaGGGAGTTGTGGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSPVTVS*GVVGCD
Trigger: ATCACAGCCCACAACTCCTCAAGAAACTGTGACAGG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCAGAGATTGCAAACTTaGTTCTTGCATTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVQRLQT*FLHSVQ
Trigger: CTGCACAGAATGCAAGAATCAAGTTTGCAATCTCTG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTCGGGAATTTGTACGTaGGCTTTAAGTAGATCACGT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVSGICT*ALSRSR
Trigger: ACGTGATCTACTTAAAGCTCACGTACAAATTCCCGA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATCTGTTGCCGCTTCATaGGTTCTTCATAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSVAAS*VLHKQH
Trigger: ATGCTGCTTATGAAGAACTCATGAAGCGGCAACAGA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGACAACACCATTAGATaGCCTCAAAACACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFDNTIR*PQNTSH
Trigger: GTGGGAAGTGTTTTGAGGTCATCTAATGGTGTTGTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAAAATGGAGCCAGGTTaGGTGGTGATAGCAAATGTG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPKMEPG*VVIANV
Trigger: CACATTTGCTATCACCACTCAACCTGGCTCCATTTT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATGTTCCTCAAGCTGCTaGTGGAGCTGTTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVCSSSC*WSCCCS
Trigger: GCTGCAACAACAGCTCCATCAGCAGCTTGAGGAACA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAATATCCCACTCATCCTaGTCTTCGTCATCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPISHSS*SSSSVW
Trigger: CCAAACTGATGACGAAGATCAGGATGAGTGGGATAT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTATATCCCACTCATCCTaGTCTTCGTCATCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFISHSS*SSSSVW
Trigger: CCAAACTGATGACGAAGATCAGGATGAGTGGGATAT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTAAGCCCTCGGAATACTaGAAAGGAGCCCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSKPSEY*KGALEL
Trigger: AAGTTCCAGGGCTCCTTTTCAGTATTCCGAGGGCTT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTGGGTCTGGTACTGCTaGCCTCACTGTCAGACATAT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSWVWYC*PHCQTY
Trigger: ATATGTCTGACAGTGAGGTCAGCAGTACCAGACCCA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTCTGCAGATATGCTTaGTATTGGACTGCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFVCRYA*YWTACH
Trigger: ATGGCAAGCAGTCCAATATCAAGCATATCTGCAGAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACCACAACTGATGACATaGCCAGTGGGGACTGCTGGA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLPQLMT*PVGTAG
Trigger: TCCAGCAGTCCCCACTGGTCATGTCATCAGTTGTGG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCATTCTGGACAACCATaGCTTGACCTCGTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSHSGQP*LDLVLE
Trigger: TTCCAGGACGAGGTCAAGTCATGGTTGTCCAGAATG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACGTGGCTTCTGCTTTTaGTCACAGAGGGCTTTGGGG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRGFCF*SQRALG
Trigger: CCCCAAAGCCCTCTGTGATCAAAAGCAGAAGCCACG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTGCTGGCGCCTGTGCTaGAGAAGTTGGTGGTGCTTG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWCWRLC*RSWWCL
Trigger: CAAGCACCACCAACTTCTGCAGCACAGGCGCCAGCA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTTCTGTCCTGTCTTTaGTGGGCTCCCCTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQFLSCL*WAPLGL
Trigger: AAGGCCGAGGGGAGCCCAGCAAAGACAGGACAGAAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGGGGCTGGAAGGGCTaGTTTCTTGCGAGAACGAGT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRGWKG*FLARTS
Trigger: ACTCGTTCTCGCAAGAAAGCAGCCCTTCCAGCCCCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTGCCGAGCTTTGCGCTaGTGCTTGCTTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSCRALR*CLLSPF
Trigger: AAAAGGAGAAAGCAAGCAGCAGCGCAAAGCTCGGCA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATATTTGTGGGGTTTGTaGATCATTTCTTCATACATC +
Preference number: 4 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLYLWGL*IISSYI
Trigger: GATGTATGAAGAAATGATGCACAAACCCCACAAATA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGTTACTTGCATCTGTTaGCGCTTCATGAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVVTCIC*RFMSSS
Trigger: TGAAGAACTCATGAAGCGGCAACAGATGCAAGTAAC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACTTGCTGTGGAATACTaGGGGGTACTAATCCCAACT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLAVEY*GVLIPT
Trigger: AGTTGGGATTAGTACCCCGCAGTATTCCACAGCAAG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGACAATCAAAAGAGTaGTTTCCTCTCCAACCACCT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFGQSKE*FPLQPP
Trigger: AGGTGGTTGGAGAGGAAAGCACTCTTTTGATTGTCC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACCCATCTCGTCATACTaGCCCCGAACTTTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVPISSY*PRTLAP
Trigger: TGGAGCTAAAGTTCGGGGGCAGTATGACGAGATGGG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTGCACAGATATCTCTaGGACTGTTTGAACTGCTAC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVLHRYL*DCLNCY
Trigger: GTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACTTGGCATCCACCCGTaGTCGTATGGAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLGIHP*SYGRCS
Trigger: AGAACACCTTCCATACGAGCACGGGTGGATGCCAAG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGACTTTCTGCAGCTCTaGCGCCAGCTGCTTGGGATC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTDFLQL*RQLLGI
Trigger: GATCCCAAGCAGCTGGCGGCAGAGCTGCAGAAAGTC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCTTGTACTCAACACTTaGATTCTGGACAACCATGAC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVLVLNT*ILDNHD
Trigger: GTCATGGTTGTCCAGAATGCAAGTGTTGAGTACAAG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGGCGACACTGGTTTTaGTTTGACTGCGAGATGGTC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGRHWF*FDCEMV
Trigger: GACCATCTCGCAGTCAAAGCAAAACCAGTGTCGCCC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGCAGGTCCAGGCTGTTaGGCTACAGGTTTTGCTTGC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLAGPGC*ATGFAC
Trigger: GCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCTTTGCTGGCCCTGGTaGAACCTTTCCCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTLCWPW*NLSLTR
Trigger: CCTGGTCAGGGAAAGGTTCCACCAGGGCCAGCAAAG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTGTGGGCCAGGCTGTTaGGCTGGGAGTTTAGCTGTC +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWCGPGC*AGSLAV
Trigger: GACAGCTAAACTCCCAGCCCAACAGCCTGGCCCACA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGGGCTTTGCTGGAGTTaGCTGTTGAGGCTGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLGLCWS*LLRLWL
Trigger: AAGCCACAGCCTCAACAGCCAACTCCAGCAAAGCCC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAAGGCCGGTTTGGGTTTaGTGGTCTTGTCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVRPVWV*WSCLAS
Trigger: AGAAGCCAGACAAGACCACCAAACCCAAACCGGCCT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATGGGTTGCTGAGAACTaGAAGTGTCTGATTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPWVAEN*KCLICP
Trigger: AGGACAAATCAGACACTTCCAGTTCTCAGCAACCCA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCCTGAGCTTCCAAAATaGACAGTACTGTACTTTCCA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSPELPK*TVLYFP
Trigger: TGGAAAGTACAGTACTGTCCATTTTGGAAGCTCAGG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGTGAAGCTGGATGCATaGAGACTCGAGGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVVKLDA*RLEDPS
Trigger: AGAGGGATCCTCGAGTCTCCATGCATCCAGCTTCAC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAGAGAGATTACTGGGTaGCGTCTTTGGTCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPREITG*RLWSFS
Trigger: AGAGAAAGACCAAAGACGCCACCCAGTAATCTCTCT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCTTAGGAGAAGTTGCTaGAGGCAACGGTGGGGGTGG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWLRRSC*RQRWGW
Trigger: CCACCCCCACCGTTGCCTCCAGCAACTTCTCCTAAG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCAACTTGTAATGGCTTaGGCAGCAGAAGAATCTGTT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVQLVMA*AAEESV
Trigger: AACAGATTCTTCTGCTGCCCAAGCCATTACAAGTTG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAAACCTCATTCGCTGTaGTCTGCCTTTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPKPHSL*SAFSHP
Trigger: TGGATGTGAAAAGGCAGACCACAGCGAATGAGGTTT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGTTCTATACCCACTTaGCTTTCTGTGCCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFCSIPT*LSVPVV
Trigger: CACAACAGGCACAGAAAGCCAAGTGGGTATAGAACA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTACCGTGTACCATCCTTaGCTCTGTGGTATTTCAATG +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFTVYHP*LCGISM
Trigger: CATTGAAATACCACAGAGCCAAGGATGGTACACGGT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATCTTCGTCATCAGTTTaGACACTGGTATCAACGCTC +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSSSSV*TLVSTL
Trigger: GAGCGTTGATACCAGTGTCCAAACTGATGACGAAGA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCCACCCGTGCTCGTATaGAAGGTGTTCTTATGGTTC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSPPVLV*KVFLWF
Trigger: GAACCATAAGAACACCTTCCATACGAGCACGGGTGG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGACTTTTGGAGATTTaGGTGGGGAAGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGLLEI*VGKEPA
Trigger: AGCTGGCTCCTTCCCCACCCAAATCTCCAAAAGTCC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAACTGAAAAGGAGCCCTaGAACTTTCGTCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLTEKEP*NFRLLL
Trigger: CAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTCTCGGTCTATGTCCTaGAGAATTTTGGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSSRSMS*RILARA
Trigger: GGCTCGAGCCAAAATTCTCCAGGACATAGACCGAGA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCGCTCAATGCCGTGCTaGCTTTCTACTCGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTRSMPC*LSTRLG
Trigger: ACCCAGCCGAGTAGAAAGCCAGCACGGCATTGAGCG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGCAGAAGATGAAGAATaGCCAAAAGAGACATCCAGA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSAEDEE*PKETSR
Trigger: TCTGGATGTCTCTTTTGGCCATTCTTCATCTTCTGC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTCTTCTTCTGAATTCTaGGCCACAATTGGTATTCTT +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSSSSEF*ATIGIL
Trigger: AAGAATACCAATTGTGGCCCAGAATTCAGAAGAAGA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAACCAGTGGGGACTGCTaGAGTGAGACTTTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLTSGDC*SETFCS
Trigger: GCTGCAGAAAGTCTCACTCCAGCAGTCCCCACTGGT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAATCTCTCCTGTAATTaGGTGAGAGGCAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFNLSCN*VRGSLG
Trigger: TCCAAGACTGCCTCTCACCCAATTACAGGAGAGATT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCCTGCATCTTCCAGGTaGGTCTGGGCGACACTGGTT +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTPASSR*VWATLV
Trigger: AACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CAA 72 bp TATCCCACAGTCATGCCATCCACTTGCTTCTTGGTTTaGACCTCATTTGCTTCTGAAAGCATAGATCACCAC +
Preference number: 4 (lower is better)
Translates to: YPTVMPSTCFLV*TSFASESIDHH
Trigger: GTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCAAGTGGATGGCATGACTGTGGGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAATGGGCTGCTGAGGTaGAGGCTTTGTTGGACCAGG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSNGLLR*RLCWTR
Trigger: CCTGGTCCAACAAAGCCTTCACCTCAGCAGCCCATT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAACAGAGCCACTCTTTaGTCTCAGTTAAGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPNRATL*SQLSED
Trigger: ATCCTCACTTAACTGAGATCAAAGAGTGGCTCTGTT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAAGAGCTCTTTGCATCTaGCAGTTTAAACAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLRALCI*QFKQSH
Trigger: GTGGCTCTGTTTAAACTGTCAGATGCAAAGAGCTCT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAATCTCCAAGTTGTCCTaGTATTGCTCTCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLISKLS*YCSLCL
Trigger: CAGACACAGAGAGCAATATCAGGACAACTTGGAGAT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTCATCCTCAGAGCCTaGAGCATCCTCATCAGCGCT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQFILRA*SILISA
Trigger: AGCGCTGATGAGGATGCTTCAGGCTCTGAGGATGAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGGTTGCTCCTTAGTTTaGGAAGAAGGTGTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQGCSLV*EEGVGA
Trigger: GGCCCCAACACCTTCTTCTCAAACTAAGGAGCAACC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACCATCAGTGATCCCCTaGGATATGGTGCTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLPSVIP*DMVLSV
Trigger: GACTGACAGCACCATATCTCAGGGGATCACTGATGG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGCTTCTTTTGAACCATaGTCTTTTCTTGTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVASFEP*SFLVLG
Trigger: TCCGAGAACAAGAAAAGATCATGGTTCAAAAGAAGC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTAGTTGTAACTGTTGTTaGGCTAGCGTCTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSSCNCC*ASVSCL
Trigger: GAGACAGGAGACGCTAGCTCAACAACAGTTACAACT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGTCACACCGTCAGACTaGACCGTGTACCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSVTPSD*TVYHPW
Trigger: CCAAGGATGGTACACGGTTCAGTCTGACGGTGTGAC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGTCACACCGTCAGACTaGACCGTGTACCATCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTVTPSD*TVYHPW
Trigger: CCAAGGATGGTACACGGTTCAGTCTGACGGTGTGAC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACTTGGGGTCAGACATTaGACGCTGCATCATCTTGGC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLGVRH*TLHHLG
Trigger: GCCAAGATGATGCAGCGTTCAATGTCTGACCCCAAG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTGGCTGAATTCAGTCTaGGGAGCTGTTCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWWLNSV*GAVLGR
Trigger: GCGGCCAAGAACAGCTCCTCAGACTGAATTCAGCCA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAAAGTCTGTCACTTCTTaGGACCTCCGTGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVKSVTS*DLRVSV
Trigger: CACTGAGACACGGAGGTCTCAAGAAGTGACAGACTT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGAGAGACCAGCAAGGTaGTCTAAGCTCTCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTERPAR*SKLSVP
Trigger: GGGCACAGAGAGCTTAGATCACCTTGCTGGTCTCTC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTCTATAAGTTTCCCTaGGTGTTCTGCACTTCCACC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLFYKFP*VFCTST
Trigger: GGTGGAAGTGCAGAACACTCAGGGAAACTTATAGAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAGTCTGACAACATATTaGGGTCCAGTCTTACACATA +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVSLTTY*GPVLHI
Trigger: TATGTGTAAGACTGGACCTCAATATGTTGTCAGACT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGAGAAAAGTAAAATCTaGAGTGAGTGGCCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLEKSKI*SEWPAG
Trigger: TCCTGCAGGCCACTCACTTCAGATTTTACTTTTCTC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAACTCTTGTTTCCTGTaGATGGAGGGCGACTCCGCA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQNSCFL*MEGDSA
Trigger: TGCGGAGTCGCCCTCCATGCACAGGAAACAAGAGTT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGTTTGGGCTGGACTCTaGTGGGAAGGTTTTGCTGTG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQVWAGL*WEGFAV
Trigger: CACAGCAAAACCTTCCCAGCAGAGTCCAGCCCAAAC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTTTAGAGAGGCCTTGTaGTGGCGCCTGTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSFREAL*WRLCCR
Trigger: TCTGCAGCACAGGCGCCAGCACAAGGCCTCTCTAAA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATGTCACTTGAGCCTGTaGCTGCACTTGAGAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLCHLSL*LHLRAQ
Trigger: CTGAGCTCTCAAGTGCAGGCACAGGCTCAAGTGACA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGGGGCTGGAAGGGCTaGTTTCTTGCGAGAACGAGT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRGWKG*FLARTS
Trigger: ACTCGTTCTCGCAAGAAAGCAGCCCTTCCAGCCCCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTTCACCTACAAGTGTaGTTGCCTGAGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFFHLQV*LPELPK
Trigger: TTTTGGAAGCTCAGGCAAGCACACTTGTAGGTGAAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTTTGTGACTTGGGCTaGTGTCACTGTCTTCATCAA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPFCDLG*CHCLHQ
Trigger: TTGATGAAGACAGTGACAGCAGCCCAAGTCACAAAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACTAGAACTCTTCCTCTaGTGCTGCTCCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLELFL*CCSSSL
Trigger: GAGAGAACTGGAGCAGCAGCAGAGGAAGAGTTCTAG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCCTCTCAGGTTTAGTTaGTACAGATTCTGTGATAGA +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVPLRFS*YRFCDR
Trigger: TCTATCACAGAATCTGTAGCAACTAAACCTGAGAGG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTCAGGAAGGGTAGTTaGAGGCTGCTGTGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKFRKGS*RLLCCA
Trigger: TGCACAGCACAGCAGCCTGCAACTACCCTTCCTGAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTCAGCAAAGCGTTGTTaGTTAATTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVSAKRC*LIFSSS
Trigger: GGAACTGGAGAAAATTAAGCAACAACGCTTTGCTGA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACCCATCTCGTCATACTaGCCCCGAACTTTAGCTCCA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKPISSY*PRTLAP
Trigger: TGGAGCTAAAGTTCGGGGGCAGTATGACGAGATGGG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAATTCCGTGGATCATCTaGCATGCTTTCCCCCATCTC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVIPWII*HAFPHL
Trigger: GAGATGGGGGAAAGCATGGCAGATGATCCACGGAAT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACTTGGCATCCACCCGTaGTCGTATGGAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLGIHP*SYGRCS
Trigger: AGAACACCTTCCATACGAGCACGGGTGGATGCCAAG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTCATGGAGACTAAATaGAGAGCTCAAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFFMETK*RAQSCC
Trigger: ACAGCAGCTTTGAGCTCTGCATTTAGTCTCCATGAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGTCATCCATGATGAATaGTATATCACGGTCATAACC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVVIHDE*YITVIT
Trigger: GGTTATGACCGTGATATAGCATTCATCATGGATGAC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGGTTATTTTTATCCTTaGATGAGGAAAGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSGYFYP*MRKDVV
Trigger: CACTACATCTTTCCTCATGCAAGGATAAAAATAACC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTTGTACTCAACACTTaGATTCTGGACAACCATGAC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFLVLNT*ILDNHD
Trigger: GTCATGGTTGTCCAGAATGCAAGTGTTGAGTACAAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGCCTCCGTGTCTGCTaGTCCCATTCCTGGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSLRVC*SHSWLF
Trigger: AAACAGCCAGGAATGGGAGCAGCAGACACGGAGGCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTTTAGCCTCCGTGTCTaGTGCTCCCATTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSFSLRV*CSHSWL
Trigger: CAGCCAGGAATGGGAGCAGCAGACACGGAGGCTAAA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAGCTGGTGTTTGGGCTaGACTCTGCTGGGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQSWCLG*TLLGRF
Trigger: AAACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGCAACAGAAGCTCAGTaGTGTTGCAAAGAGGACAGA +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSATEAQ*CCKEDR
Trigger: TCTGTCCTCTTTGCAACACCACTGAGCTTCTGTTGC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAGGTCCATGAAGGGTTaGCTGTTTCACCAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWRSMKG*LFHQWR
Trigger: CCGCCACTGGTGAAACAGCCAACCCTTCATGGACCT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGGCTTTAGAATCAAGTaGGGTAATTGTATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVGFRIK*GNCISC
Trigger: ACAGGAGATACAATTACCCCACTTGATTCTAAAGCC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATGTGCCAGACGGTGTTaGGGATCCTTTTGGTACTGG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKCARRC*GSFWYW
Trigger: CCAGTACCAAAAGGATCCCCAACACCGTCTGGCACA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGACTGGGTGGCGTCTTTaGTCTTTCTCTCCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQTGWRL*SFSPPL
Trigger: CAGAGGAGGAGAGAAAGACCAAAGACGCCACCCAGT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACGTAACAATAGCAGTTaGAGCCACTGGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRNNSS*SHWSCS
Trigger: GCTGCAGCTCCAGTGGCTCCAACTGCTATTGTTACG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATGTTCTATACCCACTTaGCTTTCTGTGCCTGTTGTG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLCSIPT*LSVPVV
Trigger: CACAACAGGCACAGAAAGCCAAGTGGGTATAGAACA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCATGTTACTGCCTGAGTaGAAGGACCTAATGATAAGT +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSMLLPE*KDLMIS
Trigger: ACTTATCATTAGGTCCTTCCACTCAGGCAGTAACAT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATGTTGTTGCAGCTGTTaGATCTGCTCAAGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPCCCSC*ICSSCN
Trigger: GTTACAACTTGAGCAGATCCAACAGCTGCAACAACA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATGGTGGCATCTTCAGTaGCCCAAAACTGACTGCCCT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKWWHLQ*PKTDCP
Trigger: AGGGCAGTCAGTTTTGGGCCACTGAAGATGCCACCA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCCATCCTTGGCTCTGTaGTATTTCAATGGCTACCAC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSPSLAL*YFNGYH
Trigger: GTGGTAGCCATTGAAATACCACAGAGCCAAGGATGG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGGACTTTTGGAGATTTaGGTGGGGAAGGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKGLLEI*VGKEPA
Trigger: AGCTGGCTCCTTCCCCACCCAAATCTCCAAAAGTCC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTAGCCATATCTGGATaGAGTACTTTCTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVLAISG*STFCGL
Trigger: AAGTCCACAGAAAGTACTCCATCCAGATATGGCTAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCTCGAGCCATGGTATTaGTTCTGCACATTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSLEPWY*FCTFFS
Trigger: GGAGAAGAATGTGCAGAACCAATACCATGGCTCGAG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATTGATAGGATGGCTGTaGAGTTGGGGTAGGTTGAGC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLIGWL*SWGRLS
Trigger: GCTCAACCTACCCCAACTCCACAGCCATCCTATCAA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCATTATCAGTAGAAACTaGAGCAATCATCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSIISRN*SNHQGL
Trigger: CAACCCCTGATGATTGCTCCAGTTTCTACTGATAAT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGTAGAGCCGACCGGATaGTATTTCCTAACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQVEPTG*YFLTCP
Trigger: TGGGCACGTTAGGAAATACCATCCGGTCGGCTCTAC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGTAGAGCCGACCGGATaGTATTTCCTAACGTGCCCA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKVEPTG*YFLTCP
Trigger: TGGGCACGTTAGGAAATACCATCCGGTCGGCTCTAC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAATTCTGGGCCACAATTaGTATTCTTCCTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPILGHN*YSSSTL
Trigger: CAGAGTAGAGGAAGAATACCAATTGTGGCCCAGAAT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGGGTCTGGGCGACACTaGTTTTGCTTTGACTGCGAG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWGSGRH*FCFDCE
Trigger: CTCGCAGTCAAAGCAAAACCAGTGTCGCCCAGACCC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATCTTCCAGGTGGGTCTaGGCGACACTGGTTTTGCTT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLSSRWV*ATLVLL
Trigger: AAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
3UTR CAA 72 bp GGATTAAAGGCGTGCGCCACCACTGCCCGGCAAATATaGACTTTTTACATTCCTTTCTATCATAGGAGATTT +
Preference number: 4 (lower is better)
Translates to: GLKACATTARQI*TFYIPFYHRRF
Trigger: AAATCTCCTATGATAGAAAGGAATGTAAAAAGTCAATATTTGCCGGGCAGTGGTGGCGCACGCCTTTAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAGGCAGCTTCTGCTCTaGCCTAAACGTGTCCGTAGT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWRQLLL*PKRVRS
Trigger: ACTACGGACACGTTTAGGTCAGAGCAGAAGCTGCCT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAATTCTGTGCAGGTGTTaGAGTTGGGAGGATCCTGAG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKILCRC*SWEDPE
Trigger: CTCAGGATCCTCCCAACTTCAACACCTGCACAGAAT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTTTCTTCTAGTTTTTaGTCTGTGGCGACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLSSSF*SVATAG
Trigger: GCCAGCGGTCGCCACAGATCAAAAACTAGAAGAAAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACTTTCTTCTAGTTTTTaGTCTGTGGCGACCGCTGGC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLSSSF*SVATAG
Trigger: GCCAGCGGTCGCCACAGATCAAAAACTAGAAGAAAG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAGTTGCACTGCTGGTTaGGTCTGTAAGAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQSCTAG*VCKRCS
Trigger: GGAGCATCTCTTACAGACTCAACCAGCAGTGCAACT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGTTGCACTGCTGGTTaGGTCTGTAAGAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKSCTAG*VCKRCS
Trigger: GGAGCATCTCTTACAGACTCAACCAGCAGTGCAACT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAGACGTAGCACTCTCTaGAGGCTCAGAGTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQRRSTL*RLRVGQ
Trigger: TTGACCTACTCTGAGCCTTCAGAGAGTGCTACGTCT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAGACGTAGCACTCTCTaGAGGCTCAGAGTAGGTCAA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLRRSTL*RLRVGQ
Trigger: TTGACCTACTCTGAGCCTTCAGAGAGTGCTACGTCT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGGTTGCTCCTTAGTTTaGGAAGAAGGTGTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTGCSLV*EEGVGA
Trigger: GGCCCCAACACCTTCTTCTCAAACTAAGGAGCAACC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGCCTGTAGTCTTGCTTaGATAATCCATTACCTCACC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSACSLA*IIHYLT
Trigger: GGTGAGGTAATGGATTATTCAAGCAAGACTACAGGC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAATTGCATCTGTTGTATaGATGCCAGATAAATCCCTG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPIASVV*MPDKSL
Trigger: CAGGGATTTATCTGGCATTCATACAACAGATGCAAT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAAGCCCTCGGAATACTaGAAAGGAGCCCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKKPSEY*KGALEL
Trigger: AAGTTCCAGGGCTCCTTTTCAGTATTCCGAGGGCTT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGTCGGAGGAACTAGCTaGGCTTCTGTTTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVVGGTS*ASVCVC
Trigger: ACAAACACAAACAGAAGCTCAGCTAGTTCCTCCGAC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAAGTCTGTCACTTCTTaGGACCTCCGTGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLKSVTS*DLRVSV
Trigger: CACTGAGACACGGAGGTCTCAAGAAGTGACAGACTT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATCCTTCCCTGGTCCTTaGTGTTTAGGGATCAACTTG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVSFPGP*CLGINL
Trigger: CAAGTTGATCCCTAAACAGCAAGGACCAGGGAAGGA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGAAGTTGGTGGTGCTTaGAGAGGTCTTCCTGTTACC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKEVGGA*RGLPVT
Trigger: GGTAACAGGAAGACCTCTGCAAGCACCACCAACTTC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAAGAGGCTACACACGGTaGTTTGACACTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVRGYTR*FDTQYM
Trigger: CATGTACTGAGTGTCAAAGCACCGTGTGTAGCCTCT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAAGTGGTGGCGCTTCTaGAGCAGGTGGCTTCTTTTC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSKWWRF*SRWLLF
Trigger: GAAAAGAAGCCACCTGCTGCAGAAGCGCCACCACTT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGAGCTCCTCCATTTCTaGTGCCTGGCGCAATTCTTC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSELLHF*CLAQFF
Trigger: GAAGAATTGCGCCAGGCAGCAGAAATGGAGGAGCTC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCCCCAGTTTCTTTCTTaGCTTTTATCAACTCCTTTT +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSPQFLS*LLSTPF
Trigger: AAAAGGAGTTGATAAAAGGCAAGAAAGAAACTGGGG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTCATTCGCTGTGGTCTaGCTTTTCACATCCATTGCA +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSSFAVV*LFTSIA
Trigger: TGCAATGGATGTGAAAAGGCAGACCACAGCGAATGA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTTGATGTAGTAAGCTaGAGTGGTGATGTTACTGCA +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPFDVVS*SGDVTA
Trigger: TGCAGTAACATCACCACTGCAGCTTACTACATCAAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAAAACAGTGCTCAAGATaGCAGGTGGGGCAATGTACT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVKQCSR*QVGQCT
Trigger: AGTACATTGCCCCACCTGGCATCTTGAGCACTGTTT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACCCAATGGCTCAGTTTaGACAGATATCTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVPNGSV*TDISAT
Trigger: AGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCTTGGCATCCACCCGTaGTCGTATGGAAGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWLGIHP*SYGRCS
Trigger: AGAACACCTTCCATACGAGCACGGGTGGATGCCAAG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTTGGCATCCTAAACTaGCCCCTTTGTAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFFGILN*PLCKSF
Trigger: AAAAGACTTACAAAGGGGGCAGTTTAGGATGCCAAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTGGACCTGCTCCCACTaGTGTATGGCTTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQWTCSH*CMAYLL
Trigger: AAGCAGATAAGCCATACAGCAGTGGGAGCAGGTCCA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTCATCCATGATGAATaGTATATCACGGTCATAACC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFVIHDE*YITVIT
Trigger: GGTTATGACCGTGATATAGCATTCATCATGGATGAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGTCTTCTTCATGAGCTaGTCCATGGAAATACTTTTA +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSVFFMS*SMEILL
Trigger: TAAAAGTATTTCCATGGAGCAGCTCATGAAGAAGAC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTTCCTGTTACCGTTTaGCTTATTGATTTAGAAGGT +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLPVTV*LIDLEG
Trigger: ACCTTCTAAATCAATAAGCCAAACGGTAACAGGAAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTGGCTGTTTCACCAGTaGCGGTGGCTTTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSWLFHQ*RWLFGL
Trigger: GAGTCCAAAAAGCCACCGCCACTGGTGAAACAGCCA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTGGCTGTTTCACCAGTaGCGGTGGCTTTTTGGACTC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTWLFHQ*RWLFGL
Trigger: GAGTCCAAAAAGCCACCGCCACTGGTGAAACAGCCA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAAGTTCCTCACTCTCCTaGCTTTTAGTTTCTCGGAAT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLSSSLS*LLVSRN
Trigger: ATTCCGAGAAACTAAAAGCCAGGAGAGTGAGGAACT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGTGAAGCTGGATGCATaGAGACTCGAGGATCCCTCT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWVKLDA*RLEDPS
Trigger: AGAGGGATCCTCGAGTCTCCATGCATCCAGCTTCAC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATGTCAAAGTCCAGAGTaGACTCAGCCATGTCATCCC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKCQSPE*TQPCHP
Trigger: GGGATGACATGGCTGAGTCCACTCTGGACTTTGACA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATCCAGATACAGAGTGTaGGGATCCAGGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKSRYRV*GSRLLL
Trigger: AAGGAGCAACCTGGATCCCCACACTCTGTATCTGGA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGATTTATTCGAGTGTaGGGAAAGTGGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGFIRV*GKWRGR
Trigger: CCTACCTCTCCACTTTCCCCACACTCGAATAAATCC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGGCTCTGGAGGAATTaGTATGGAAACACTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRLWRN*YGNTPG
Trigger: CCCAGGAGTGTTTCCATACCAATTCCTCCAGAGCCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTTTATGATAGAAGGTTaGACAGCACTAATTTGTCGC +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSFMIEG*TALICR
Trigger: GCGACAAATTAGTGCTGTCCAACCTTCTATCATAAA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTGTCTCATCATGAACTaGGCCTGCCGCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWCLIMN*ACRSSS
Trigger: AGAGGAAGAGCGGCAGGCCCAGTTCATGATGAGACA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTGCCTGTTCAGTGGTaGTTTGTGGAGAAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKLPVQW*FVEKQS
Trigger: GGACTGCTTCTCCACAAACCACCACTGAACAGGCAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTAAATTGCCTGTTCAGTaGTGGTTTGTGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSKLPVQ*WFVEKQ
Trigger: CTGCTTCTCCACAAACCACCACTGAACAGGCAATTT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGATCTGTTTCTGTTTaGCATCCTAAACTGCCCCCT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGSVSV*HPKLPP
Trigger: AGGGGGCAGTTTAGGATGCCAAACAGAAACAGATCC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAACTTTAGCCATATCTaGATGGAGTACTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPNFSHI*MEYFLW
Trigger: CCACAGAAAGTACTCCATCCAGATATGGCTAAAGTT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGACTTTCGTCTGCTGTTaGACTCAGAGGCTTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTTFVCC*TQRLGV
Trigger: GACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATGTCCTGGAGAATTTTaGCTCGAGCCATGGTATTGG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVCPGEF*LEPWYW
Trigger: CCAATACCATGGCTCGAGCCAAAATTCTCCAGGACA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGCCATTCCCATTGGCTaGCCAACAGGACTTAGTGGA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSAIPIG*PTGLSG
Trigger: TCCACTAAGTCCTGTTGGCCAGCCAATGGGAATGGC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTCCGATCCAGACCATaGCCATTTTCCAACCGAGAC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKFRSRP*PFSNRD
Trigger: GTCTCGGTTGGAAAATGGCCATGGTCTGGATCGGAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAATCCACAACTTTTGGTaGCTCATGAAGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLIHNFW*LMKFQM
Trigger: CATCTGGAACTTCATGAGCCACCAAAAGTTGTGGAT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTCCAAGGAAGTCGTTaGATGAGAATCTATCATAAT +
Preference number: 4 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLQGSR*MRIYHN
Trigger: ATTATGATAGATTCTCATCCAACGACTTCCTTGGAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGCTTTGACTGCGAGATaGTCCATGAGATCGGAGATG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQALTAR*SMRSEM
Trigger: CATCTCCGATCTCATGGACCATCTCGCAGTCAAAGC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTGCTGCTCCCATTCCTaGCTGTTTCACAGGGTCTTG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSCCSHS*LFHRVL
Trigger: CAAGACCCTGTGAAACAGCCAGGAATGGGAGCAGCA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGACTGCCTCGGAGTCTaGTATCAAATCAAAAGGGTT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVDCLGV*YQIKRV
Trigger: AACCCTTTTGATTTGATATCAGACTCCGAGGCAGTC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTCCCTTGGTCCTTCTaGGCAACTTTTTGTTTCTTT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLFPWSF*ATFCFF
Trigger: AAAGAAACAAAAAGTTGCTCAGAAGGACCAAGGGAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCCTGTCACAGTTTCTTaGGGAGTTGTGGGCTGTGAT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWPVTVS*GVVGCD
Trigger: ATCACAGCCCACAACTCCTCAAGAAACTGTGACAGG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACGGGGTTTTCTCAATTaGTGGTGTTTCTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVRGFLN*WCFFLW
Trigger: CCAGAGAAAGAAACACCATCAATTGAGAAAACCCCG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAAAAGTTGTCTTTTTCTaGGAGGATTCTGCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLKVVFF*EDSAEY
Trigger: GTACTCTGCAGAATCCTCTCAGAAAAAGACAACTTT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAAGTCCAGTTGGAATTaGAGAAGGCTTAGGAGGGAC +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQKSSWN*RRLRRD
Trigger: GTCCCTCCTAAGCCTTCTTCAATTCCAACTGGACTT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGTCACAACAGTCCTATaGGACTTTGATGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVVTTVL*DFDVLR
Trigger: TCTCAGCACATCAAAGTCTCATAGGACTGTTGTGAC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAGTTGTAACTGTTGTTaGGCTAGCGTCTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLSCNCC*ASVSCL
Trigger: GAGACAGGAGACGCTAGCTCAACAACAGTTACAACT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGTCGGAGGAACTAGCTaGGCTTCTGTTTGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKVGGTS*ASVCVC
Trigger: ACAAACACAAACAGAAGCTCAGCTAGTTCCTCCGAC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAGGTCTCTACTTTCTTaGATAGGTGAAAACTTAGAC +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFRSLLS*IGENLD
Trigger: GTCTAAGTTTTCACCTATTCAAGAAAGTAGAGACCT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGACTTTTGGTGGCTCATaGAGTTCCAGATGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQTFGGS*SSRCCG
Trigger: TCCACAGCATCTGGAACTTCATGAGCCACCAAAAGT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAACTTTTGGTGGCTCATaGAGTTCCAGATGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLTFGGS*SSRCCG
Trigger: TCCACAGCATCTGGAACTTCATGAGCCACCAAAAGT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAACTTTTGGTGGCTCATaGAGTTCCAGATGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKTFGGS*SSRCCG
Trigger: TCCACAGCATCTGGAACTTCATGAGCCACCAAAAGT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAGAGGCTACACACGGTaGTTTGACACTCAGTACATG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLRGYTR*FDTQYM
Trigger: CATGTACTGAGTGTCAAAGCACCGTGTGTAGCCTCT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGGTCACCTTGGTTTGTaGTTTCTTAGGCTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQGHLGL*FLRLLL
Trigger: AAGGAGGAGCCTAAGAAAGCACAAACCAAGGTGACC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTCACTGTTGGAGCTTaGACAGGTTTGGCCTCTAAG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQFTVGA*TGLASK
Trigger: CTTAGAGGCCAAACCTGTGCAAGCTCCAACAGTGAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGCTGTGTTACGTCTCTaGTTTCCTTCTGTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQAVLRL*FPSVCP
Trigger: AGGACAGACAGAAGGAAAGCAGAGACGTAACACAGC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCACGTCTGTGTTTCCCTaGTGGGCTTTTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSTSVFP*WAFSFP
Trigger: GGGAAAGGAAAAAGCCCAGCAGGGAAACACAGACGT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGACGTCTGTGTTTCCCTaGTGGGCTTTTTCCTTTCCC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTTSVFP*WAFSFP
Trigger: GGGAAAGGAAAAAGCCCAGCAGGGAAACACAGACGT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCTAGAACTCTTCCTCTaGTGCTGCTCCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTLELFL*CCSSSL
Trigger: GAGAGAACTGGAGCAGCAGCAGAGGAAGAGTTCTAG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCTCCTCCATTTCTGCTaGCTGGCGCAATTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWLLHFC*LAQFFC
Trigger: ACAGAAGAATTGCGCCAGGCAGCAGAAATGGAGGAG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTCTGCATAACAGATTaGTCATCTGTTGGTGAGTAT +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPFCITD*SSVGEY
Trigger: ATACTCACCAACAGATGAGCAATCTGTTATGCAGAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCCATTTTGTTCATCTTaGCTGGTGAGCAGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWPFCSS*LVSRLP
Trigger: TGGCAGCCTGCTCACCAGGCAAGATGAACAAAATGG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATGCTCTCTTCCTCTCTaGTGCATAAATCCATTTTGT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLCSLPL*CINPFC
Trigger: ACAAAATGGATTTATGCAGCAGAGAGGAAGAGAGCA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAAACAGTGCTCAAGATaGCAGGTGGGGCAATGTACT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKKQCSR*QVGQCT
Trigger: AGTACATTGCCCCACCTGGCATCTTGAGCACTGTTT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACCCAATGGCTCAGTTTaGACAGATATCTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKPNGSV*TDISAT
Trigger: AGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACCCAATGGCTCAGTTTaGACAGATATCTCTGCGACT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLPNGSV*TDISAT
Trigger: AGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTTGGCATCCTAAACTaGCCCCTTTGTAAGTCTTTT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLFGILN*PLCKSF
Trigger: AAAAGACTTACAAAGGGGGCAGTTTAGGATGCCAAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATGCTTGATATTGGACTaGTTGCCATACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLCLILD*LPYCFF
Trigger: AAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGAGTCTGGAGGAAGTCTaGAAAGGCGCTAGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTSLEEV*KGARKS
Trigger: AGACTTCCTAGCGCCTTTGCAGACTTCCTCCAGACT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGATCTAAGCTCTCTGTaGCCCTACGGAATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLDLSSL*PYGILA
Trigger: AGCAAGAATTCCGTAGGGGCACAGAGAGCTTAGATC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTGGACCTGCTCCCACTaGTGTATGGCTTATCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTWTCSH*CMAYLL
Trigger: AAGCAGATAAGCCATACAGCAGTGGGAGCAGGTCCA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGGTTATTTTTATCCTTaGATGAGGAAAGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVGYFYP*MRKDVV
Trigger: CACTACATCTTTCCTCATGCAAGGATAAAAATAACC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTCCATTCCAAAACTTaGATCCCTTCTATAAGTTTC +
Preference number: 4 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVFHSKT*IPSISF
Trigger: GAAACTTATAGAAGGGATGCAAGTTTTGGAATGGAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGGCTTGCTGCCGCCGTaGTTCTTTTTGCTTACTGAA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSGLLPP*FFLLTE
Trigger: TTCAGTAAGCAAAAAGAAGCACGGCGGCAGCAAGCC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTTTACTTGGTTGAATaGGGAGTTGCTGCACAGCGG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKFYLVE*GVAAQR
Trigger: CCGCTGTGCAGCAACTCCGCATTCAACCAAGTAAAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTTTTGCTTGCTGAGCTaGTGTTTGGGCTGGACTCTG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWFCLLS*CLGWTL
Trigger: CAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCTTCCTGTTACCGTTTaGCTTATTGATTTAGAAGGT +
Preference number: 4 (lower is better)
Translates to: YYEPGWMDGGNKGETASFLPVTV*LIDLEG
Trigger: ACCTTCTAAATCAATAAGCCAAACGGTAACAGGAAG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGCTGTCCTGTTTGGATaGAAGTTCCTTCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQAVLFG*KFLLWG
Trigger: TCCCCAAAGAAGGAACTTCCATCCAAACAGGACAGC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTTTTTCTTCCTCGGATaGTTTCTTTTCTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSFFFLG*FLFWQD
Trigger: GTCCTGCCAGAAAAGAAACCATCCGAGGAAGAAAAA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTCAGGAGAAACCTTCTaGGGCTGTGTTTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSSGETF*GCVFFS
Trigger: AGAAAAGAAAACACAGCCCCAGAAGGTTTCTCCTGA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAATCCCGTGTTTCGGATaGAGTCTGAGTTTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKIPCFG*SLSFLL
Trigger: CAGCAGAAAACTCAGACTCCATCCGAAACACGGGAT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCTTTGTGCTCCTTCCTaGAAGGAAAACCTTGTGCGC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTLCAPS*KENLVR
Trigger: GCGCACAAGGTTTTCCTTCCAGGAAGGAGCACAAAG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTCTGTGTTTCCCTGCTaGGCTTTTTCCTTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQSVFPC*AFSFPL
Trigger: AAGGGGAAAGGAAAAAGCCCAGCAGGGAAACACAGA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTCCAGATACAGAGTGTaGGGATCCAGGTTGCTCCTT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSRYRV*GSRLLL
Trigger: AAGGAGCAACCTGGATCCCCACACTCTGTATCTGGA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGACTCCCGAAATGACTTaGCGTGTTTCTGGGTATGGG +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTTPEMT*RVSGYG
Trigger: CCCATACCCAGAAACACGCCAAGTCATTTCGGGAGT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTTGCCTGTTCAGTGGTaGTTTGTGGAGAAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLPVQW*FVEKQS
Trigger: GGACTGCTTCTCCACAAACCACCACTGAACAGGCAA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACTACACTGGAGACTTTaGAAGGGGGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKLHWRL*KGVWSC
Trigger: ACAAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACTACACTGGAGACTTTaGAAGGGGGTTTGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLHWRL*KGVWSC
Trigger: ACAAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCCACCCGTGCTCGTATaGAAGGTGTTCTTATGGTTC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTPPVLV*KVFLWF
Trigger: GAACCATAAGAACACCTTCCATACGAGCACGGGTGG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTTTCTTGTCTTTGGGTaGAGATGTGGCACCCATATA +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSFLVFG*RCGTHI
Trigger: TATATGGGTGCCACATCTCCACCCAAAGACAAGAAA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTATGGAGTACTTTCTGTaGACTTATGTCATCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSMEYFL*TYVIRE
Trigger: CTCCCTGATGACATAAGTCCACAGAAAGTACTCCAT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTCAGGAGGGGGATTTaGCAGTGTTCTCTTCACTTT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLRRGI*QCSLHF
Trigger: AAAGTGAAGAGAACACTGCCAAATCCCCCTCCTGAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCCAGATACCGTAGCTTaGCATCAATCTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSPDTVA*HQSPFL
Trigger: AAGAAAAGGAGATTGATGCCAAGCTACGGTATCTGG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTTGTATCTGCAGATATaGGCGGCAAAGGTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWLYLQI*AAKVQL
Trigger: CAGCTGGACCTTTGCCGCCCATATCTGCAGATACAA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCCAACCGAGACTCCCTaGGTTTATCAAACCAATCCG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWPTETP*VYQTNP
Trigger: CGGATTGGTTTGATAAACCCAGGGAGTCTCGGTTGG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATCGGGGAAGATACCGTaGCTTCTGCTTTTGATCACA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLSGKIP*LLLLIT
Trigger: TGTGATCAAAAGCAGAAGCCACGGTATCTTCCCCGA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGGGATTTCTCAATGGTaGGAACCTGCATATCCTTGG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQGISQW*EPAYPW
Trigger: CCAAGGATATGCAGGTTCCCACCATTGAGAAATCCC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGGGATTTCTCAATGGTaGGAACCTGCATATCCTTGG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKGISQW*EPAYPW
Trigger: CCAAGGATATGCAGGTTCCCACCATTGAGAAATCCC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTACCAGGACTACTGTaGGATTTCTCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLPGLL*DFSMVG
Trigger: TCCCACCATTGAGAAATCCCACAGTAGTCCTGGTAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACTACCAGGACTACTGTaGGATTTCTCAATGGTGGGA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLPGLL*DFSMVG
Trigger: TCCCACCATTGAGAAATCCCACAGTAGTCCTGGTAG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCACAAGTGTGCTTGCCTaGGCTTCCAAAATGGACAGT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSTSVLA*ASKMDS
Trigger: ACTGTCCATTTTGGAAGCTCAGGCAAGCACACTTGT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCCAATCTCTTTGAGCTaGCTCCTGATGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQPISLS*LLMNSS
Trigger: TGAAGAGTTCATCAGGAGTCAGCTCAAAGAGATTGG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACCAATCTCTTTGAGCTaGCTCCTGATGAACTCTTCA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLPISLS*LLMNSS
Trigger: TGAAGAGTTCATCAGGAGTCAGCTCAAAGAGATTGG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTATGTGGGCTTTTCCTaGCCCAAGATCTCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWYVGFS*PKISPD
Trigger: ATCTGGAGAGATCTTGGGTCAGGAAAAGCCCACATA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGTCACAACAGTCCTATaGGACTTTGATGTGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKVTTVL*DFDVLR
Trigger: TCTCAGCACATCAAAGTCTCATAGGACTGTTGTGAC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGACAACACCATTAGATaGCCTCAAAACACTTCCCAC +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQDNTIR*PQNTSH
Trigger: GTGGGAAGTGTTTTGAGGTCATCTAATGGTGTTGTC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAGTTGTAACTGTTGTTaGGCTAGCGTCTCCTGTCTC +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWSCNCC*ASVSCL
Trigger: GAGACAGGAGACGCTAGCTCAACAACAGTTACAACT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGCATGGTAATAATGTaGGAGACCAGCAAGGTGATC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKSMVIM*ETSKVI
Trigger: GATCACCTTGCTGGTCTCTCACATTATTACCATGCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTCTATAAGTTTCCCTaGGTGTTCTGCACTTCCACC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLFYKFP*VFCTST
Trigger: GGTGGAAGTGCAGAACACTCAGGGAAACTTATAGAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTTGGGCTACAGGTTTTaGTTGCTGAGCTGGTGTTTG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLGYRF*LLSWCL
Trigger: CAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGCCTTTTCTGGAGTATaGAACAGAAGCTCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSAFSGV*NRSSVV
Trigger: CACCACTGAGCTTCTGTTGCATACTCCAGAAAAGGC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATTTCACCTACAAGTGTaGTTGCCTGAGCTTCCAAAA +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVFHLQV*LPELPK
Trigger: TTTTGGAAGCTCAGGCAAGCACACTTGTAGGTGAAA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATCAGGATTCTCTTTGTaGTCCTTCCTGGAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVSGFSL*SFLEGK
Trigger: TTTTCCTTCCAGGAAGGAGCACAAAGAGAATCCTGA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCTGACCCTCCAAAATTaGCTGTTCAGTGGTGGTTTG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWLTLQN*LFSGGL
Trigger: CAAACCACCACTGAACAGGCAATTTTGGAGGGTCAG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAAACAGTGCTCAAGATaGCAGGTGGGGCAATGTACT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWKQCSR*QVGQCT
Trigger: AGTACATTGCCCCACCTGGCATCTTGAGCACTGTTT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTGCGACTGTTTGAACTaGTACACTGGAGACTTTGGA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQCDCLN*YTGDFG
Trigger: TCCAAAGTCTCCAGTGTAGCAGTTCAAACAGTCGCA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAAGCAGTGCCCATGGTaGTGTAAGTTGACTGTGTTC +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWKQCPW*CKLTVF
Trigger: GAACACAGTCAACTTACAGCACCATGGGCACTGCTT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGACTGCTTGCCATACTaGTTCTTTCCTCCAAACCTA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLDCLPY*FFPPNL
Trigger: TAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGATCTAAGCTCTCTGTaGCCCTACGGAATTCTTGCT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSDLSSL*PYGILA
Trigger: AGCAAGAATTCCGTAGGGGCACAGAGAGCTTAGATC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTGGGGCTGTCCTGTTTaGATGGAAGTTCCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTWGCPV*MEVPSL
Trigger: CAAAGAAGGAACTTCCATCCAAACAGGACAGCCCCA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGATCCTTTTGGTACTaGCTTTGTATCTGGTTTAGG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGSFWY*LCIWFR
Trigger: CCTAAACCAGATACAAAGCCAGTACCAAAAGGATCC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGTCAGGTGGGGCGTTaGGTTAAATCCACAGAGATT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSQVGR*VKSTEI
Trigger: AATCTCTGTGGATTTAACCCAACGCCCCACCTGACT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTTTTACCTTTCGCGTaGGCAGCTGTTGGTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKFLPFA*AAVGVF
Trigger: GAAAACACCAACAGCTGCCCACGCGAAAGGTAAAAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAAGCCACTTTGCCTATaGGTCCTTCTTCGGGAATTT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLKPLCL*VLLREF
Trigger: AAATTCCCGAAGAAGGACCCATAGGCAAAGTGGCTT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTGGGAGAGAGATTACTaGGTGGCGTCTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSWERDY*VASLVF
Trigger: AAAGACCAAAGACGCCACCCAGTAATCTCTCTCCCA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTGGGAGAGAGATTACTaGGTGGCGTCTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTWERDY*VASLVF
Trigger: AAAGACCAAAGACGCCACCCAGTAATCTCTCTCCCA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGAACAAGAGGACCTATaGAGCTCCTCCATTTCTGCT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSEQEDL*SSSISA
Trigger: AGCAGAAATGGAGGAGCTCCATAGGTCCTCTTGTTC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAATCGTGTCAGCTTGTaGCCTCTCAGGTTTAGTTGC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSNRVSL*PLRFSC
Trigger: GCAACTAAACCTGAGAGGCCACAAGCTGACACGATT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTTTCTGTGTAGTCACTaGAATCTCAGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSFLCSH*NLRDCW
Trigger: CCAGCAGTCCCTGAGATTCCAGTGACTACACAGAAA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAAATTGCCTGTTCAGTaGTGGTTTGTGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKKLPVQ*WFVEKQ
Trigger: CTGCTTCTCCACAAACCACCACTGAACAGGCAATTT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAAATTGCCTGTTCAGTaGTGGTTTGTGGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLKLPVQ*WFVEKQ
Trigger: CTGCTTCTCCACAAACCACCACTGAACAGGCAATTT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCCATCCTTGGCTCTGTaGTATTTCAATGGCTACCAC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTPSLAL*YFNGYH
Trigger: GTGGTAGCCATTGAAATACCACAGAGCCAAGGATGG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGACCGTGTACCATCCTTaGCTCTGTGGTATTTCAATG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQTVYHP*LCGISM
Trigger: CATTGAAATACCACAGAGCCAAGGATGGTACACGGT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTCTTATGGTTCCCAATaGCTCAGTTTGCACAGATAT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSSYGSQ*LSLHRY
Trigger: ATATCTGTGCAAACTGAGCCATTGGGAACCATAAGA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATGGAAGGTGTTCTTATaGTTCCCAATGGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVWKVFL*FPMAQF
Trigger: AAACTGAGCCATTGGGAACCATAAGAACACCTTCCA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGGGAAAGTGGTGAGATaGGTGAGTAAAGGACTTTTG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQGKVVR*VSKGLL
Trigger: CAAAAGTCCTTTACTCACCCATCTCACCACTTTCCC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGACAGATCCTTTTCATaGAGACTAAATGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVDRSFS*RLNAEL
Trigger: GAGCTCTGCATTTAGTCTCCATGAAAAGGATCTGTC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAATCTCTCCTGTAATTaGGTGAGAGGCAGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQNLSCN*VRGSLG
Trigger: TCCAAGACTGCCTCTCACCCAATTACAGGAGAGATT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGCCATTGTTGTCTCTaGGGACCAGGTTTCTTGCTT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSHCCL*GPGFLL
Trigger: AAGCAAGAAACCTGGTCCCCAGAGACAACAATGGCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGGATTAAGACTTTTCTaGACATATTTAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPGLRLF*TYLVLL
Trigger: GAGAAGGACTAAATATGTCCAGAAAAGTCTTAATCC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTCGGGGAAGATACCGTaGCTTCTGCTTTTGATCACA +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWSGKIP*LLLLIT
Trigger: TGTGATCAAAAGCAGAAGCCACGGTATCTTCCCCGA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGATTTAGAAGGTTGTTaGGCTGAAGGTTTTCCCAGG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSDLEGC*AEGFPR
Trigger: CCTGGGAAAACCTTCAGCTCAACAACCTTCTAAATC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAATTGCTCTCTGTGTCTaGCAGTTTAAACAAAGCCAT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVIALCV*QFKQSH
Trigger: ATGGCTTTGTTTAAACTGTCAGACACAGAGAGCAAT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGAAGTTGGTACTGTTTaGAACAGAGAGGCTGTTACA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKEVGTV*NREAVT
Trigger: TGTAACAGCCTCTCTGTTTCAAACAGTACCAACTTC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAAAATGGAGCCAGGTTaGGTGGTGATAGCAAATGTG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWKMEPG*VVIANV
Trigger: CACATTTGCTATCACCACTCAACCTGGCTCCATTTT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTACCTGAAACTGTGTaGTCCTTAGAGTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLPETV*SLESLV
Trigger: AACCAGAGACTCTAAGGATCACACAGTTTCAGGTAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGGAGTGTTGTCCAGATaGGATGTGCTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLGVLSR*DVLDKS
Trigger: TGATTTATCTAGCACATCTCATCTGGACAACACTCC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGGAGTGTTGTCCAGATaGGATGTGCTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKGVLSR*DVLDKS
Trigger: TGATTTATCTAGCACATCTCATCTGGACAACACTCC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCTTCTTGTCTTTCTCTaGCTTCTTCACTGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLLVFL*LLHCWS
Trigger: GCTCCAACAGTGAAGAAGGCAGAGAAAGACAAGAAG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACTCATCTCTATAATCTaGTTTCGAATGAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLISII*FRMKSS
Trigger: CGAGGACTTCATTCGAAAGCAGATTATAGAGATGAG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGTTACTTGCATCTGTTaGCGCTTCATGAGTTCTTCA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLVTCIC*RFMSSS
Trigger: TGAAGAACTCATGAAGCGGCAACAGATGCAAGTAAC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAAATTGGAGGTTTGCTTaGCTCTGGTCTATGTGTAAA +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVNWRFA*LWSMCK
Trigger: TTTACACATAGACCAGAGGCAAGCAAACCTCCAATT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTGCAGCTGTTGGATCTaGTCAAGTTGTAACTGTTGT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQCSCWI*SSCNCC
Trigger: ACAACAGTTACAACTTGAGCAGATCCAACAGCTGCA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGACTGCTTGCCATACTaGTTCTTTCCTCCAAACCTA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSDCLPY*FFPPNL
Trigger: TAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGACTGCTTGCCATACTaGTTCTTTCCTCCAAACCTA +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWDCLPY*FFPPNL
Trigger: TAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAGGAGTCTGCAGATATaGTTGATATTGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQRSLQI*LILDCL
Trigger: CAAGCAGTCCAATATCAAGCATATCTGCAGACTCCT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAACTTGCCATGCTCAATaGTTTCAGTCTGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVTCHAQ*FQSVLS
Trigger: TGAAAGAACAGACTGAAAGCATTGAGCATGGCAAGT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTGGTTTTGCTTTGACTaGGAGATGGTCCATGAGATC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTWFCFD*EMVHEI
Trigger: GATCTCATGGACCATCTCGCAGTCAAAGCAAAACCA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCTCCTTCTTCTGAACTaGATCCTTGCTCTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLLLLN*ILALRS
Trigger: ACTTCTGAGAGCAAGGATCCAGTTCAGAAGAAGGAG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCATCATCGTCGAAGCTaGTACTACTCTTTCGAGTCA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSHHRRS*YYSFES
Trigger: TGACTCGAAAGAGTAGTACCAGCTTCGACGATGATG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATGTTGTTGCAGCTGTTaGATCTGCTCAAGTTGTAAC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKCCCSC*ICSSCN
Trigger: GTTACAACTTGAGCAGATCCAACAGCTGCAACAACA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTCTTCGTCATCAGTTTaGACACTGGTATCAACGCTC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTSSSSV*TLVSTL
Trigger: GAGCGTTGATACCAGTGTCCAAACTGATGACGAAGA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATGGAAGGTGTTCTTATaGTTCCCAATGGCTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKWKVFL*FPMAQF
Trigger: AAACTGAGCCATTGGGAACCATAAGAACACCTTCCA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTTTTGGCTCGAGCCATaGTATTGGTTCTGCACATTC +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWFWLEP*YWFCTF
Trigger: GAATGTGCAGAACCAATACCATGGCTCGAGCCAAAA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACCAGATACCGTAGCTTaGCATCAATCTCCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLPDTVA*HQSPFL
Trigger: AAGAAAAGGAGATTGATGCCAAGCTACGGTATCTGG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATTCTGTTTGTGTTTGTaGTGGTATGAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVFCLCL*WYELAE
Trigger: TTCAGCCAGTTCATACCACCACAAACACAAACAGAA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGCTCCAAATACAATGTaGTTTGCCGAGGCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQAPNTM*FAEAFV
Trigger: AACAAAAGCCTCGGCAAACCACATTGTATTTGGAGC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGCTCCAAATACAATGTaGTTTGCCGAGGCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLAPNTM*FAEAFV
Trigger: AACAAAAGCCTCGGCAAACCACATTGTATTTGGAGC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGACAGATCCTTTTCATaGAGACTAAATGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKDRSFS*RLNAEL
Trigger: GAGCTCTGCATTTAGTCTCCATGAAAAGGATCTGTC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGGAGACGATCTGTTTTaGACAGATCCTTTTCATGGA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQGDDLF*TDPFHG
Trigger: TCCATGAAAAGGATCTGTCCAAAACAGATCGTCTCC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGCAGAAGATGAAGAATaGCCAAAAGAGACATCCAGA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLAEDEE*PKETSR
Trigger: TCTGGATGTCTCTTTTGGCCATTCTTCATCTTCTGC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGATTCTTCCTCTACTCTaGCTGATTGGTAAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTILPLL*LIGKLV
Trigger: CACCAGCTTACCAATCAGCCAGAGTAGAGGAAGAAT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTCAGACATAGCATGTTaGAAGTCATCCATGATGAAT +
Preference number: 4 (lower is better)
Translates to: CFLVLTSFASESIDHHSSSDIAC*KSSMMN
Trigger: ATTCATCATGGATGACTTCCAACATGCTATGTCTGA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAATCCACAACTTTTGGTaGCTCATGAAGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKIHNFW*LMKFQM
Trigger: CATCTGGAACTTCATGAGCCACCAAAAGTTGTGGAT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTTATCCACAACTTTTaGTGGCTCATGAAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLIHNF*WLMKFQ
Trigger: CTGGAACTTCATGAGCCACCAAAAGTTGTGGATAAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
3UTR CAA 72 bp CAATTTCTGTGTTACTTTCTTTATGGGCATTGGCGGTaGATGGGAAAGAGAATGCTTCATCTTGATGATTCA +
Preference number: 4 (lower is better)
Translates to: QFLCYFLYGHWR*MGKRMLHLDDS
Trigger: TGAATCATCAAGATGAAGCATTCTCTTTCCCATCAACCGCCAATGCCCATAAAGAAAGTAACACAGAAATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCAGAGATTGCAAACTTaGTTCTTGCATTCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWQRLQT*FLHSVQ
Trigger: CTGCACAGAATGCAAGAATCAAGTTTGCAATCTCTG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGAAGTTGGTACTGTTTaGAACAGAGAGGCTGTTACA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSEVGTV*NREAVT
Trigger: TGTAACAGCCTCTCTGTTTCAAACAGTACCAACTTC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGTAAGCTGCAGTGGTaGTGTTACTGCATGTTCTAT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSKLQW*CYCMFY
Trigger: ATAGAACATGCAGTAACATCACCACTGCAGCTTACT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGAGTAAGCTGCAGTGGTaGTGTTACTGCATGTTCTAT +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTSKLQW*CYCMFY
Trigger: ATAGAACATGCAGTAACATCACCACTGCAGCTTACT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGTAACCATATGGCCCTaGTCTATCATATTGATAGTG +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQVTIWP*SIILIV
Trigger: CACTATCAATATGATAGATCAGGGCCATATGGTTAC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTTGAGTCTGATAAGGTaGCACTTGCTGATGGTACAA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLSLIR*HLLMVQ
Trigger: TTGTACCATCAGCAAGTGTCACCTTATCAGACTCAA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGAGCTTCAGCCTCTTaGGCTTTCAATCTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRASAS*AFNLSD
Trigger: ATCACTAAGATTGAAAGCTCAAGAGGCTGAAGCTCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAGAGCTTCAGCCTCTTaGGCTTTCAATCTTAGTGAT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWRASAS*AFNLSD
Trigger: ATCACTAAGATTGAAAGCTCAAGAGGCTGAAGCTCT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTTACCTGAAACTGTGTaGTCCTTAGAGTCTCTGGTT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLPETV*SLESLV
Trigger: AACCAGAGACTCTAAGGATCACACAGTTTCAGGTAA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAAGGAAGTCGTTGGATaGGAATCTATCATAATCCCA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQKEVVG*ESIIIP
Trigger: TGGGATTATGATAGATTCTCATCCAACGACTTCCTT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGGAGTGTTGTCCAGATaGGATGTGCTAGATAAATCA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSGVLSR*DVLDKS
Trigger: TGATTTATCTAGCACATCTCATCTGGACAACACTCC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACTCATCTCTATAATCTaGTTTCGAATGAAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLISII*FRMKSS
Trigger: CGAGGACTTCATTCGAAAGCAGATTATAGAGATGAG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATTTCTGAGAGGATTCTaGAGAGTACTTATCTGTTAC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVFLRGF*RVLICY
Trigger: GTAACAGATAAGTACTCTGCAGAATCCTCTCAGAAA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTCCATAGTAATAGTTTaGAGGCTGGCATTGATGTCA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQSIVIV*RLALMS
Trigger: TGACATCAATGCCAGCCTGCAAACTATTACTATGGA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATCCATAGTAATAGTTTaGAGGCTGGCATTGATGTCA +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLSIVIV*RLALMS
Trigger: TGACATCAATGCCAGCCTGCAAACTATTACTATGGA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCGCTCCAAGTCAAGTTaGTGTTGTTGTTTGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRSKSS*CCCLSS
Trigger: TGAAGACAAACAACAACAGCAACTTGACTTGGAGCG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATCAGCAAAGCGTTGTTaGTTAATTTTCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLSAKRC*LIFSSS
Trigger: GGAACTGGAGAAAATTAAGCAACAACGCTTTGCTGA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTGCAGCTGTTGGATCTaGTCAAGTTGTAACTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTCSCWI*SSCNCC
Trigger: ACAACAGTTACAACTTGAGCAGATCCAACAGCTGCA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTCAGACATTGAACGCTaGATCATCTTGGCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSDIER*IILAVL
Trigger: TAAGACAGCCAAGATGATGCAGCGTTCAATGTCTGA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTCAGACATTGAACGCTaGATCATCTTGGCTGTCTTA +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTSDIER*IILAVL
Trigger: TAAGACAGCCAAGATGATGCAGCGTTCAATGTCTGA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTCATCAAGTTCTGCTTaGTTCTTTCTAAGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQSSSSA*FFLSLA
Trigger: TGCCAAGCTTAGAAAGAAGCAAGCAGAACTTGATGA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAGGAGTCTGCAGATATaGTTGATATTGGACTGCTTG +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWRSLQI*LILDCL
Trigger: CAAGCAGTCCAATATCAAGCATATCTGCAGACTCCT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTTCATGGAGACTAAATaGAGAGCTCAAAGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSFMETK*RAQSCC
Trigger: ACAGCAGCTTTGAGCTCTGCATTTAGTCTCCATGAA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGGGACCAGGTTTCTTaGTTGAAGAATATGTATTAT +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGDQVS*LKNMYY
Trigger: ATAATACATATTCTTCAAGCAAGAAACCTGGTCCCC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAACTTGCCATGCTCAATaGTTTCAGTCTGTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKTCHAQ*FQSVLS
Trigger: TGAAAGAACAGACTGAAAGCATTGAGCATGGCAAGT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAAAATTGGCCTTTTCTaGAGTATGCAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKKIGLF*SMQQKL
Trigger: GAGCTTCTGTTGCATACTCCAGAAAAGGCCAATTTT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
38% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTTTTTCTTCCTCGGATaGTTTCTTTTCTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTFFFLG*FLFWQD
Trigger: GTCCTGCCAGAAAAGAAACCATCCGAGGAAGAAAAA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACATACCACCATACAATaGCTCTTTTTCAAACACTTC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVHTTIQ*LFFKHF
Trigger: GAAGTGTTTGAAAAAGAGCCATTGTATGGTGGTATG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAGAACTTCGGAAAAATaGGTGAGATTTGGATGGATG +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLRTSEK*VRFGWM
Trigger: CATCCATCCAAATCTCACCCATTTTTCCGAAGTTCT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTAGCCATATCTGGATaGAGTACTTTCTGTGGACTT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLAISG*STFCGL
Trigger: AAGTCCACAGAAAGTACTCCATCCAGATATGGCTAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTCTGTTTGTGTTTGTaGTGGTATGAACTGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKFCLCL*WYELAE
Trigger: TTCAGCCAGTTCATACCACCACAAACACAAACAGAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGACAGATCCTTTTCATaGAGACTAAATGCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWDRSFS*RLNAEL
Trigger: GAGCTCTGCATTTAGTCTCCATGAAAAGGATCTGTC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGATTCTGGGCCACAATTaGTATTCTTCCTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTILGHN*YSSSTL
Trigger: CAGAGTAGAGGAAGAATACCAATTGTGGCCCAGAAT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGATCCACAACTTTTGGTaGCTCATGAAGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTIHNFW*LMKFQM
Trigger: CATCTGGAACTTCATGAGCCACCAAAAGTTGTGGAT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTACCGTTTGGCTTATTaGTTTAGAAGGTTGTTGAGC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSYRLAY*FRRLLS
Trigger: GCTCAACAACCTTCTAAATCAATAAGCCAAACGGTA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCATGGCTTTCTGGAATaGTATAAGAGCTTGAAACAA +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQHGFLE*YKSLKQ
Trigger: TTGTTTCAAGCTCTTATATCATTCCAGAAAGCCATG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR TCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGCTTCTTTTGAACCATaGTCTTTTCTTGTTCTCGGA +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWASFEP*SFLVLG
Trigger: TCCGAGAACAAGAAAAGATCATGGTTCAAAAGAAGC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTTCTGAGAGGATTCTaGAGAGTACTTATCTGTTAC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLFLRGF*RVLICY
Trigger: GTAACAGATAAGTACTCTGCAGAATCCTCTCAGAAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTCTCTCTGCTTCTCTTaGTCTTTTAATAACTCCTCT +
Preference number: 4 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQSLCFS*SFNNSS
Trigger: AGAGGAGTTATTAAAAGAGCAAGAGAAGCAGAGAGA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTCTGCATAACAGATTaGTCATCTGTTGGTGAGTAT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKFCITD*SSVGEY
Trigger: ATACTCACCAACAGATGAGCAATCTGTTATGCAGAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR GCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATATTTGTGGGGTTTGTaGATCATTTCTTCATACATC +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVYLWGL*IISSYI
Trigger: GATGTATGAAGAAATGATGCACAAACCCCACAAATA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTGCTTGATATTGGACTaGTTGCCATACTGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTCLILD*LPYCFF
Trigger: AAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAAAATTGGCCTTTTCTaGAGTATGCAACAGAAGCTC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSKIGLF*SMQQKL
Trigger: GAGCTTCTGTTGCATACTCCAGAAAAGGCCAATTTT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGGCTTTAGAATCAAGTaGGGTAATTGTATCTCCTGT +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWGFRIK*GNCISC
Trigger: ACAGGAGATACAATTACCCCACTTGATTCTAAAGCC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATCTGTTGAAAAATGTTaGGTTATCTTAACATCTGGG +
Preference number: 4 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVSVEKC*VILTSG
Trigger: CCCAGATGTTAAGATAACCCAACATTTTTCAACAGA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGATTCTGTGATAGATaGTGCTATACCAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRFCDR*CYTRKR
Trigger: TCTTTTCCTGGTATAGCACCATCTATCACAGAATCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGAACTTCGGAAAAATaGGTGAGATTTGGATGGATG +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRTSEK*VRFGWM
Trigger: CATCCATCCAAATCTCACCCATTTTTCCGAAGTTCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTTATGATAGAAGGTTaGACAGCACTAATTTGTCGC +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLFMIEG*TALICR
Trigger: GCGACAAATTAGTGCTGTCCAACCTTCTATCATAAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATCTTCTTCTGAATTCTaGGCCACAATTGGTATTCTT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKSSSEF*ATIGIL
Trigger: AAGAATACCAATTGTGGCCCAGAATTCAGAAGAAGA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATCAGACATAGCATGTTaGAAGTCATCCATGATGAAT +
Preference number: 4 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLSDIAC*KSSMMN
Trigger: ATTCATCATGGATGACTTCCAACATGCTATGTCTGA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACTCCAAGGAAGTCGTTaGATGAGAATCTATCATAAT +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKLQGSR*MRIYHN
Trigger: ATTATGATAGATTCTCATCCAACGACTTCCTTGGAG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR TCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGGTCTCTACTTTCTTaGATAGGTGAAAACTTAGAC +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRSLLS*IGENLD
Trigger: GTCTAAGTTTTCACCTATTCAAGAAAGTAGAGACCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTTCGTCTCGTTCATTTaGAGCTGGAAAAGCTTTATA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSFVSFI*SWKSFI
Trigger: TATAAAGCTTTTCCAGCTGCAAATGAACGAGACGAA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGGTTATTTTTATCCTTaGATGAGGAAAGATGTAGTG +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKGYFYP*MRKDVV
Trigger: CACTACATCTTTCCTCATGCAAGGATAAAAATAACC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTCCATTCCAAAACTTaGATCCCTTCTATAAGTTTC +
Preference number: 4 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKFHSKT*IPSISF
Trigger: GAAACTTATAGAAGGGATGCAAGTTTTGGAATGGAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGGGGACCAGGTTTCTTaGTTGAAGAATATGTATTAT +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTGDQVS*LKNMYY
Trigger: ATAATACATATTCTTCAAGCAAGAAACCTGGTCCCC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR GCA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGTCTTCTTCATGAGCTaGTCCATGGAAATACTTTTA +
Preference number: 4 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWVFFMS*SMEILL
Trigger: TAAAAGTATTTCCATGGAGCAGCTCATGAAGAAGAC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGATTCTGTGATAGATaGTGCTATACCAGGAAAAGA +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRFCDR*CYTRKR
Trigger: TCTTTTCCTGGTATAGCACCATCTATCACAGAATCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTCTTCTTCTGAATTCTaGGCCACAATTGGTATTCTT +
Preference number: 4 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSSSEF*ATIGIL
Trigger: AAGAATACCAATTGTGGCCCAGAATTCAGAAGAAGA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CCA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGGATTAAGACTTTTCTaGACATATTTAGTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTGLRLF*TYLVLL
Trigger: GAGAAGGACTAAATATGTCCAGAAAAGTCTTAATCC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp GGCGACTCCGCAGCGGCCGCGGGGACGCTTCCCTTGGGCAGCCCCTaGGCCCTTGACATGACAGCAGCGATCTGTCTCCTCTCCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GDSAAAAGTLPLGSP*ALDMTAAICLLSSS
Trigger: CGAGGAGGAGAGGAGACAGATCGCTGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCGCGGCCGCTGCGGAGTCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp CGCAGCGGCCGCGGGGACGCTTCCCTTGGGCAGCCCCTGCGCCCTTaGCATGACAGCAGCGATCTGTCTCCTCTCCTCCTCGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: RSGRGDASLGQPLRP*HDSSDLSPLLLAQL
Trigger: CAGCTGAGCGAGGAGGAGAGGAGACAGATCGCTGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCGCGGCCGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp CGGCCGCGGGGACGCTTCCCTTGGGCAGCCCCTGCGCCCTTGACATaGCAGCAGCGATCTGTCTCCTCTCCTCCTCGCTCAGCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: RPRGRFPWAAPAPLT*QQRSVSSPPRSAGS
Trigger: TGAGCCAGCTGAGCGAGGAGGAGAGGAGACAGATCGCTGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCGCGGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp CAGCAGTCGTCTTGGCAGGTGCTGATGGGTGCGGACCTGTGGACTTaGGTGGTCCCTGAGCAGCCAGAGTCTGGGATGGGGGAGGGGCTT +
Preference number: 5 (lower is better)
Translates to: QQSSWQVLMGADLWT*VVPEQPESGMGEGL
Trigger: AAGCCCCTCCCCCATCCCAGACTCTGGCTGCTCAGGGACCACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGACGACTGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp TTGGCAGGTGCTGATGGGTGCGGACCTGTGGACTTGGGTGGTCCCTaGGCAGCCAGAGTCTGGGATGGGGGAGGGGCTTGCTTTGATGGG +
Preference number: 5 (lower is better)
Translates to: LAGADGCGPVDLGGP*AARVWDGGGACFDG
Trigger: CCCATCAAAGCAAGCCCCTCCCCCATCCCAGACTCTGGCTGCTCAGGGACCACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp GCCAGCCTGTTGAGCTGGGGGCTTGGCTGTCACTGGAGGTTGTGCTaGGGACTTCCCTGTCCCTGCTGGTTGAGCTGGGGACTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: ASLLSWGLGCHWRLC*GLPCPCWLSWGLCW
Trigger: CCAGCAAAGTCCCCAGCTCAACCAGCAGGGACAGGGAAGTCCCCAGCACAACCTCCAGTGACAGCCAAGCCCCCAGCTCAACAGGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp GGGGGACGCCCAGGGTCCGGTGGCTTTCCGGGTTGCTGTGGAGCCTaGCTACTATCCAACTCTTGTTTCCTGTGCATGGAGGGCGACTCC +
Preference number: 5 (lower is better)
Translates to: GGRPGSGGFPGCCGA*LLSNSCFLCMEGDS
Trigger: GGAGTCGCCCTCCATGCACAGGAAACAAGAGTTGGATAGTAGTCAGGCTCCACAGCAACCCGGAAAGCCACCGGACCCTGGGCGTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp TTGTGCTGGGGACTTCCCTGTCCCTGCTGGTTGAGCTGGGGACTTTaGTGGCCCTGGTTGCTGGACTGTGGCCTTTGCAGGTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LCWGLPCPCWLSWGL*WPWLLDCGLCRSRL
Trigger: CAGCCTGGACCTGCAAAGGCCACAGTCCAGCAACCAGGGCCAGCAAAGTCCCCAGCTCAACCAGCAGGGACAGGGAAGTCCCCAGCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp GCGGAGTTGCTGCACAGCGGCTTCAGCTGCGGCTATGGCCGCCCCTaGATCTTCCAGGTGGGTCTGGGCGACACTGGTTTTGCTTTGACT +
Preference number: 5 (lower is better)
Translates to: AELLHSGFSCGYGRP*IFQVGLGDTGFALT
Trigger: AGTCAAAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCCGCAGCTGAAGCCGCTGTGCAGCAACTCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp AGGCTTTGTTGGTTGAATGCGGAGTTGCTGCACAGCGGCTTCAGCTaGGGCTATGGCCGCCCCTGCATCTTCCAGGTGGGTCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: RLCWLNAELLHSGFS*GYGRPCIFQVGLGD
Trigger: GTCGCCCAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCCGCAGCTGAAGCCGCTGTGCAGCAACTCCGCATTCAACCAACAAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS CCA 90 bp TCTTCACAGCAGTCGTCTTGGCAGGTGCTGATGGGTGCGGACCTGTaGACTTGGGTGGTCCCTGAGCAGCCAGAGTCTGGGATGGGGGAG +
Preference number: 5 (lower is better)
Translates to: SSQQSSWQVLMGADL*TWVVPEQPESGMGE
Trigger: CTCCCCCATCCCAGACTCTGGCTGCTCAGGGACCACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGACGACTGCTGTGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp CGTTCTGCAGAGAGGACAGGCCGGTTTGGGTTTGGTGGTCTTGTCTaGCTTCTGGGCGAGGACGGCCTTCTCGGGCTCTGTAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: RSAERTGRFGFGGLV*LLGEDGLLGLCRWR
Trigger: CCTCCACCTACAGAGCCCGAGAAGGCCGTCCTCGCCCAGAAGCCAGACAAGACCACCAAACCCAAACCGGCCTGTCCTCTCTGCAGAACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp TTGGTTGAATGCGGAGTTGCTGCACAGCGGCTTCAGCTGCGGCTATaGCCGCCCCTGCATCTTCCAGGTGGGTCTGGGCGACACTGGTTT +
Preference number: 5 (lower is better)
Translates to: LVECGVAAQRLQLRL*PPLHLPGGSGRHWF
Trigger: AAACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCCGCAGCTGAAGCCGCTGTGCAGCAACTCCGCATTCAACCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp CGGGCCTTTTGTTTCCTTCTTCACAGCAGTCGTCTTGGCAGGTGCTaGTGGGTGCGGACCTGTGGACTTGGGTGGTCCCTGAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: RAFCFLLHSSRLGRC*WVRTCGLGWSLSSQ
Trigger: CTGGCTGCTCAGGGACCACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGACGACTGCTGTGAAGAAGGAAACAAAAGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp TTGCTGCCGCCGTGCTTCTTTTTGCTTACTGAAGGTGACCCTGGCTaGCCGGGGCTGGGAACAGAACTGGATCCTGCCGATGTGGGACCT +
Preference number: 5 (lower is better)
Translates to: LLPPCFFLLTEGDPG*PGLGTELDPADVGP
Trigger: AGGTCCCACATCGGCAGGATCCAGTTCTGTTCCCAGCCCCGGGCAGCCAGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCGGCAGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp TCTTTTACTTGGTTGAATGCGGAGTTGCTGCACAGCGGCTTCAGCTaGGGCTATGGCCGCCCCTGCATCTTCCAGGTGGGTCTGGGCGAC +
Preference number: 5 (lower is better)
Translates to: SFTWLNAELLHSGFS*GYGRPCIFQVGLGD
Trigger: GTCGCCCAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCCGCAGCTGAAGCCGCTGTGCAGCAACTCCGCATTCAACCAAGTAAAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp ATGCTGAGGGGGACGCCCAGGGTCCGGTGGCTTTCCGGGTTGCTGTaGAGCCTGACTACTATCCAACTCTTGTTTCCTGTGCATGGAGGG +
Preference number: 5 (lower is better)
Translates to: MLRGTPRVRWLSGLL*SLTTIQLLFPVHGG
Trigger: CCCTCCATGCACAGGAAACAAGAGTTGGATAGTAGTCAGGCTCCACAGCAACCCGGAAAGCCACCGGACCCTGGGCGTCCCCCTCAGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp CGGCTATGGCCGCCCCTGCATCTTCCAGGTGGGTCTGGGCGACACTaGTTTTGCTTTGACTGCGAGATGGTCCATGAGATCGGAGATGGC +
Preference number: 5 (lower is better)
Translates to: RLWPPLHLPGGSGRH*FCFDCEMVHEIGDG
Trigger: GCCATCTCCGATCTCATGGACCATCTCGCAGTCAAAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp TGGCCGCCCCTGCATCTTCCAGGTGGGTCTGGGCGACACTGGTTTTaGTTTGACTGCGAGATGGTCCATGAGATCGGAGATGGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: WPPLHLPGGSGRHWF*FDCEMVHEIGDGLQ
Trigger: CTGAAGGCCATCTCCGATCTCATGGACCATCTCGCAGTCAAAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGGGGCGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp TCTGCTTTTGCTAAGACCATGCTGAGGGGGACGCCCAGGGTCCGGTaGCTTTCCGGGTTGCTGTGGAGCCTGACTACTATCCAACTCTTG +
Preference number: 5 (lower is better)
Translates to: SAFAKTMLRGTPRVR*LSGLLWSLTTIQLL
Trigger: CAAGAGTTGGATAGTAGTCAGGCTCCACAGCAACCCGGAAAGCCACCGGACCCTGGGCGTCCCCCTCAGCATGGTCTTAGCAAAAGCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp TTTCAGCTGCCGGGCCTTTTGTTTCCTTCTTCACAGCAGTCGTCTTaGCAGGTGCTGATGGGTGCGGACCTGTGGACTTGGGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: FQLPGLLFPSSQQSS*QVLMGADLWTWVVP
Trigger: AGGGACCACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGACGACTGCTGTGAAGAAGGAAACAAAAGGCCCGGCAGCTGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp CTGCCTGAGGCTGTGTTACGTCTCTGCTTTCCTTCTGTCTGTCCTTaGGTAACGTCTGAGGTGTGGCGCCTGGCAGATCTTCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: LPEAVLRLCFPSVCP*VTSEVWRLADLQAW
Trigger: CCAGGCCTGAAGATCTGCCAGGCGCCACACCTCAGACGTTACCCAAGGACAGACAGAAGGAAAGCAGAGACGTAACACAGCCTCAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp CGTGCTTCTTTTTGCTTACTGAAGGTGACCCTGGCTGCCCGGGGCTaGGAACAGAACTGGATCCTGCCGATGTGGGACCTGAGTGAGCAT +
Preference number: 5 (lower is better)
Translates to: RASFCLLKVTLAARG*EQNWILPMWDLSEH
Trigger: ATGCTCACTCAGGTCCCACATCGGCAGGATCCAGTTCTGTTCCCAGCCCCGGGCAGCCAGGGTCACCTTCAGTAAGCAAAAAGAAGCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTGTGGGCCAGGCTGTaGGGCTGGGAGTTTAGCTGT +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLALWARL*GWEFSC
Trigger: ACAGCTAAACTCCCAGCCCAACAGCCTGGCCCACAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS TCA 90 bp GTGGCCTTTGCAGGTCCAGGCTGTTGGGCTACAGGTTTTGCTTGCTaGGCTGGTGTTTGGGCTGGACTCTGCTGGGAAGGTTTTGCTGTG +
Preference number: 5 (lower is better)
Translates to: VAFAGPGCWATGFAC*AGVWAGLCWEGFAV
Trigger: CACAGCAAAACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp TGTGTTACGTCTCTGCTTTCCTTCTGTCTGTCCTTGGGTAACGTCTaGGGTGTGGCGCCTGGCAGATCTTCAGGCCTGGTGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: CVTSLLSFCLSLGNV*GVAPGRSSGLVSGC
Trigger: GCAGCCAGACACCAGGCCTGAAGATCTGCCAGGCGCCACACCTCAGACGTTACCCAAGGACAGACAGAAGGAAAGCAGAGACGTAACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp TGGGACCTGAGTGAGCATGAGCCCCTTTCTCCACAACTGATGACATaGCCAGTGGGGACTGCTGGAGTGAGACTTTCTGCAGCTCTGCCG +
Preference number: 5 (lower is better)
Translates to: WDLSEHEPLSPQLMT*PVGTAGVRLSAALP
Trigger: CGGCAGAGCTGCAGAAAGTCTCACTCCAGCAGTCCCCACTGGTCATGTCATCAGTTGTGGAGAAAGGGGCTCATGCTCACTCAGGTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp CTGGACTGTGGCCTTTGCAGGTCCAGGCTGTTGGGCTACAGGTTTTaGTTGCTGAGCTGGTGTTTGGGCTGGACTCTGCTGGGAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LDCGLCRSRLLGYRF*LLSWCLGWTLLGRF
Trigger: AAACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAGGCCACAGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp ACAACTGATGACATGACCAGTGGGGACTGCTGGAGTGAGACTTTCTaGAGCTCTGCCGCCAGCTGCTTGGGATCCACGCCTGGAGACTTT +
Preference number: 5 (lower is better)
Translates to: TTDDMTSGDCWSETF*SSAASCLGSTPGDF
Trigger: AAAGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAGAGCTGCAGAAAGTCTCACTCCAGCAGTCCCCACTGGTCATGTCATCAGTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp CTTTGCAGGTCCAGGCTGTTGGGCTACAGGTTTTGCTTGCTGAGCTaGTGTTTGGGCTGGACTCTGCTGGGAAGGTTTTGCTGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: LCRSRLLGYRFCLLS*CLGWTLLGRFCCAR
Trigger: CCTGGCACAGCAAAACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp ATGGGCGGCAAAGGTCCAGCTGCAGCCCTGGCCATTCCCATTGGCTaGCCAACAGGACTTAGTGGACTTTCTTCTTCTGAATTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: MGGKGPAAALAIPIG*PTGLSGLSSSEFWA
Trigger: GGCCCAGAATTCAGAAGAAGAAAGTCCACTAAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGGCTGCAGCTGGACCTTTGCCGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCTTTGCTGGCCCTGGTaGCTGGACTGTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGLCWPW*LDCGLC
Trigger: GCAAAGGCCACAGTCCAGCAACCAGGGCCAGCAAAG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGTTGAGGCTGGGGCTTaGCTGGGGTGGGCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWVEAGA*LGWAVE
Trigger: CTCAACAGCCCACCCCAGCAAAGCCCCAGCCTCAAC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAAGGCAGCCTTTGGGGTaGGCTGCGGTGAGGATGGGA +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLRQPLG*AAVRMG
Trigger: TCCCATCCTCACCGCAGCCAACCCCAAAGGCTGCCT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTCACAGCAGTCGTCTaGGCAGGTGCTGATGGGTGC +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASFTAVV*AGADGC
Trigger: GCACCCATCAGCACCTGCCAAGACGACTGCTGTGAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGGCACGGGGGATGCTTaGGGTCCTGAGGATGCAGGT +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLGTGDA*GPEDAG
Trigger: ACCTGCATCCTCAGGACCCAAAGCATCCCCCGTGCC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTTTCTGTCCTGTCTTaGCTGGGCTCCCCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASFSVLS*LGSPRP
Trigger: AGGCCGAGGGGAGCCCAGCAAAGACAGGACAGAAAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGACCTGTGCCGAGCTTaGCGCTGCTGCTTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRADLCRA*RCCLLS
Trigger: AGAAAGCAAGCAGCAGCGCAAAGCTCGGCACAGGTC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGAAGGGGGTTTGGTCTaGTCACCCTCTGCCGTGCTA +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAEGGLV*SPSAVL
Trigger: TAGCACGGCAGAGGGTGACAAGACCAAACCCCCTTC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGAAGGGGGTTTGGTCTaGTCACCCTCTGCCGTGCTA +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASEGGLV*SPSAVL
Trigger: TAGCACGGCAGAGGGTGACAAGACCAAACCCCCTTC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGGCGTTTCTTGTCTTaGGGTGGAGATGTGGCACCC +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGRFLS*GGDVAP
Trigger: GGGTGCCACATCTCCACCCAAAGACAAGAAACGCCC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTGGAGTTGGGGTAGGTaGAGCCTGGGGTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAWSWGR*SLGCEG
Trigger: TCCTTCACACCCCAGGCTCAACCTACCCCAACTCCA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp GGAACTTTCGTCTGCTGTTGGACTCAGAGGCTTGGGGTCAGACATTaGACGCTGCATCATCTTGGCTGTCTTAGGGCTTGCCGGGGGAAC +
Preference number: 5 (lower is better)
Translates to: GTFVCCWTQRLGVRH*TLHHLGCLRACRGN
Trigger: GTTCCCCCGGCAAGCCCTAAGACAGCCAAGATGATGCAGCGTTCAATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp GAAGTTCCTTCTTTGGGGAAGCCTGCTGTGACGGTACAGGTGATTTaGTGGCTGTTGCTGGCTGTACTGAGGCAGCCTTTGGGGTTGGCT +
Preference number: 5 (lower is better)
Translates to: EVPSLGKPAVTVQVI*WLLLAVLRQPLGLA
Trigger: AGCCAACCCCAAAGGCTGCCTCAGTACAGCCAGCAACAGCCAGCAAATCACCTGTACCGTCACAGCAGGCTTCCCCAAAGAAGGAACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp TCGTCTGCTGTTGGACTCAGAGGCTTGGGGTCAGACATTGAACGCTaGATCATCTTGGCTGTCTTAGGGCTTGCCGGGGGAACTTTAGCC +
Preference number: 5 (lower is better)
Translates to: SSAVGLRGLGSDIER*IILAVLGLAGGTLA
Trigger: GGCTAAAGTTCCCCCGGCAAGCCCTAAGACAGCCAAGATGATGCAGCGTTCAATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp CTGCAGCTCTGCCGCCAGCTGCTTGGGATCCACGCCTGGAGACTTTaGCTTATCCACAACTTTTGGTGGCTCATGAAGTTCCAGATGCTG +
Preference number: 5 (lower is better)
Translates to: LQLCRQLLGIHAWRL*LIHNFWWLMKFQML
Trigger: CAGCATCTGGAACTTCATGAGCCACCAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAGAGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp AGTGGGGACTGCTGGAGTGAGACTTTCTGCAGCTCTGCCGCCAGCTaGTTGGGATCCACGCCTGGAGACTTTGCCTTATCCACAACTTTT +
Preference number: 5 (lower is better)
Translates to: SGDCWSETFCSSAAS*LGSTPGDFALSTTF
Trigger: AAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAGAGCTGCAGAAAGTCTCACTCCAGCAGTCCCCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp CCCTTGTATCTGCAGATATGGGCGGCAAAGGTCCAGCTGCAGCCCTaGCCATTCCCATTGGCTGGCCAACAGGACTTAGTGGACTTTCTT +
Preference number: 5 (lower is better)
Translates to: PLYLQIWAAKVQLQP*PFPLAGQQDLVDFL
Trigger: AAGAAAGTCCACTAAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGGCTGCAGCTGGACCTTTGCCGCCCATATCTGCAGATACAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGGCTACAGGTTTTGCTaGCTGAGCTGGTGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASGYRFC*LSWCLG
Trigger: GCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGGCTGTCACTGGAGGTaGTGCTGGGGACTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWGCHWR*CWGLPC
Trigger: ACAGGGAAGTCCCCAGCACAACCTCCAGTGACAGCC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGTTGAGGCTGGGGCTTaGCTGGAGTTGGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWVEAGA*LELGAE
Trigger: CTCAGCACCCAACTCCAGCAAAGCCCCAGCCTCAAC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCGGTGAGGATGGGATaGCTGCCAGTTCACCTCCCA +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWAVRMG*LPVHLP
Trigger: TGGGAGGTGAACTGGCAGCAATCCCATCCTCACCGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGAGACTGGGGTGTGGCTaGGCCAGTCGTAGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWRLGCG*ASRRSC
Trigger: ACACGACCTACGACTGGCCAAGCCACACCCCAGTCT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGGGAAACCAGATCTTTaGGGGGTGATCCCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGGKPDL*GVIPRA
Trigger: GGCCCTTGGGATCACCCCCAAAAGATCTGGTTTCCC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGGACTTTTGGAGATTaGGGTGGGGAAGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRARTFGD*GGEGAS
Trigger: GCTGGCTCCTTCCCCACCCAAATCTCCAAAAGTCCT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGAACGCTGCATCATCTaGGCTGTCTTAGGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASERCII*AVLGLA
Trigger: GGCAAGCCCTAAGACAGCCAAGATGATGCAGCGTTC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGTTGGACTCAGAGGCTaGGGGTCAGACATTGAACGC +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAVGLRG*GSDIER
Trigger: GCGTTCAATGTCTGACCCCAAGCCTCTGAGTCCAAC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCCCTGGCCATTCCCATaGGCTGGCCAACAGGACTTA +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGPWPFP*AGQQDL
Trigger: TAAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp AGTGGTGTTGCAAAGAGGACAGATGGTTTTAGAGAGGCCTTGTGCTaGCGCCTGTGCTGCAGAAGTTGGTGGTGCTTGCAGAGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: SGVAKRTDGFREALC*RLCCRSWWCLQRSS
Trigger: GGAAGACCTCTGCAAGCACCACCAACTTCTGCAGCACAGGCGCCAGCACAAGGCCTCTCTAAAACCATCTGTCCTCTTTGCAACACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATCTGCTGGGAAGGTTTaGCTGTGCCAGGGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLSAGKV*LCQGLV
Trigger: CACAAGCCCCTGGCACAGCAAAACCTTCCCAGCAGA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATTGCTGAGCTGGTGTTaGGGCTGGACTCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLLLSWC*GWTLLG
Trigger: TCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTGCTGGGGCTGGCTGTaGAGGCTGAGGTTTTGTGGC +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSCWGWL*RLRFCG
Trigger: GCCACAAAACCTCAGCCTCAACAGCCAGCCCCAGCA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACCTGTGCTGCAGAAGTaGGTGGTGCTTGCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLPVLQK*VVLAEV
Trigger: GACCTCTGCAAGCACCACCAACTTCTGCAGCACAGG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTAGGGGCCGTTGTCACTaGAGCCTGTGCCTGCACTTG +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSRGRCH*SLCLHL
Trigger: CAAGTGCAGGCACAGGCTCAAGTGACAACGGCCCCT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGTTGTGGGCTGTGATTaGGGGGCATCAGCGATACCC +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWVVGCD*GASAIP
Trigger: GGGTATCGCTGATGCCCCCAAATCACAGCCCACAAC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGTCTTCCCCCGAGCCTaGACTGTCTTCCTGCTTATA +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAVFPRA*TVFLLI
Trigger: TATAAGCAGGAAGACAGTCAAGGCTCGGGGGAAGAC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTCAGGGACTGCTGGCTaGGGGGCAATTGGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWSGTAG*GAIGGL
Trigger: CAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCAGCAGAAGAATCTGTaGGAGTCCCAGGTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAQQKNL*ESQVQR
Trigger: CCTCTGAACCTGGGACTCCAACAGATTCTTCTGCTG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTGCTGATGGAGCTGTaGTTGCAGCTGTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLALLMEL*LQLLDL
Trigger: CAGATCCAACAGCTGCAACAACAGCTCCATCAGCAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTGTTCAGTGGTGGTTaGTGGAGAAGCAGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLALFSGG*WRSSPR
Trigger: TCTGGGACTGCTTCTCCACAAACCACCACTGAACAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGCTTGGGGTCAGACATaGAACGCTGCATCATCTTGG +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAAWGQT*NAASSW
Trigger: CCAAGATGATGCAGCGTTCAATGTCTGACCCCAAGC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCCTCAGGAGGGGGATTaGGCAGTGTTCTCTTCACTT +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAPQEGD*AVFSSL
Trigger: AAGTGAAGAGAACACTGCCAAATCCCCCTCCTGAGG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATGGAGTTGGGGTAGGTaGAGCCTGGGGTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLWSWGR*SLGCEG
Trigger: TCCTTCACACCCCAGGCTCAACCTACCCCAACTCCA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCCGCCGTGCTTCTTTTaGCTTACTGAAGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASPPCFF*LTEGDP
Trigger: AGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCGG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATGGTTGAATGCGGAGTaGCTGCACAGCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLWLNAE*LHSGFS
Trigger: GCTGAAGCCGCTGTGCAGCAACTCCGCATTCAACCA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp ATCTTCAGGCCTGGTGTCTGGCTGCTGCTCTCCTTCACAAGCCAGTaGAGCCACTTTGCCTATGGGTCCTTCTTCGGGAATTTGTACGTG +
Preference number: 5 (lower is better)
Translates to: IFRPGVWLLLSFTSQ*SHFAYGSFFGNLYV
Trigger: CACGTACAAATTCCCGAAGAAGGACCCATAGGCAAAGTGGCTTCACTGGCTTGTGAAGGAGAGCAGCAGCCAGACACCAGGCCTGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp CCAGAGGTTGTTTGGGAACCTTTAGCCGTGAAGCCCTCGGAATACTaGAAAGGAGCCCTGGAACTTTCGTCTGCTGTTGGACTCAGAGGC +
Preference number: 5 (lower is better)
Translates to: PEVVWEPLAVKPSEY*KGALELSSAVGLRG
Trigger: GCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGTATTCCGAGGGCTTCACGGCTAAAGGTTCCCAAACAACCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATGCAGGTCCAGGCTGTaGGGCTACAGGTTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLCRSRL*GYRFCL
Trigger: CAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTCTGAGCTAGAGACTTaGGCCCAGGCTGCTGCAATG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWSELET*AQAAAM
Trigger: CATTGCAGCAGCCTGGGCCAAAGTCTCTAGCTCAGA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGTTGAGGCTGGGGCTTaGCTGGAGTTGGGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSVEAGA*LELGVE
Trigger: CTCAACACCCAACTCCAGCAAAGCCCCAGCCTCAAC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCCAGTTTCTTGAGGAGTaGTGGGCTGTGATTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGQFLEE*WAVIWG
Trigger: CCCCCAAATCACAGCCCACAACTCCTCAAGAAACTG...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGGCACGGGGGATGCTTaGGGTCCTGAGGATGCAGGT +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSGTGDA*GPEDAG
Trigger: ACCTGCATCCTCAGGACCCAAAGCATCCCCCGTGCC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGCTCGAGCCATGGTATaGGTTCTGCACATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAARAMV*VLHILL
Trigger: GAGAAGAATGTGCAGAACCAATACCATGGCTCGAGC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCCACAGCTTGGAAGGTaGGTTGAGTCTGATAAGGTG +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAPQLGR*VESDKV
Trigger: CACCTTATCAGACTCAACCAACCTTCCAAGCTGTGG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACATGGTGGCCACAGCTaGGAAGGTTGGTTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLHGGHS*EGWLSL
Trigger: CAGACTCAACCAACCTTCCAAGCTGTGGCCACCATG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTGCGTCTTTTACTTGGTaGAATGCGGAGTTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAASFTW*NAELLH
Trigger: GTGCAGCAACTCCGCATTCAACCAAGTAAAAGACGC...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp GAGAGGCCTTGTGCTGGCGCCTGTGCTGCAGAAGTTGGTGGTGCTTaGAGAGGTCTTCCTGTTACCGTTTGGCTTATTGATTTAGAAGGT +
Preference number: 5 (lower is better)
Translates to: ERPCAGACAAEVGGA*RGLPVTVWLIDLEG
Trigger: ACCTTCTAAATCAATAAGCCAAACGGTAACAGGAAGACCTCTGCAAGCACCACCAACTTCTGCAGCACAGGCGCCAGCACAAGGCCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp GCACGTGTCTGTTGTTTTCTGTGTAGTCACTGGAATCTCAGGGACTaGTGGCTTGGGGGCAATTGGAGGTTTGCTTGCCTCTGGTCTATG +
Preference number: 5 (lower is better)
Translates to: ARVCCFLCSHWNLRD*WLGGNWRFACLWSM
Trigger: CATAGACCAGAGGCAAGCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGAGATTCCAGTGACTACACAGAAAACAACAGACACGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp CCATACTGCGGTCCAGGAGGTGGAGTCATTCTTGCTGTGGAATACTaGGGGGTACTAATCCCAACTCCCGAAATGACTTGGCGTGTTTCT +
Preference number: 5 (lower is better)
Translates to: PYCGPGGGVILAVEY*GVLIPTPEMTWRVS
Trigger: AGAAACACGCCAAGTCATTTCGGGAGTTGGGATTAGTACCCCGCAGTATTCCACAGCAAGAATGACTCCACCTCCTGGACCGCAGTATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp AACACTTCCCACACCATACTGCGGTCCAGGAGGTGGAGTCATTCTTaGTGTGGAATACTGCGGGGTACTAATCCCAACTCCCGAAATGAC +
Preference number: 5 (lower is better)
Translates to: NTSHTILRSRRWSHS*CGILRGTNPNSRND
Trigger: GTCATTTCGGGAGTTGGGATTAGTACCCCGCAGTATTCCACAGCAAGAATGACTCCACCTCCTGGACCGCAGTATGGTGTGGGAAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp CAGAGGGCTTTGGGGACTGCTGGCTGTTTTGACTGGAGTGAGACTTaGCATGCTCAATGCTTTCAGTCTGTTCTTTCAGCGGATACCACC +
Preference number: 5 (lower is better)
Translates to: QRALGTAGCFDWSET*HAQCFQSVLSADTT
Trigger: GGTGGTATCCGCTGAAAGAACAGACTGAAAGCATTGAGCATGGCAAGTCTCACTCCAGTCAAAACAGCCAGCAGTCCCCAAAGCCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp CTGCATCTTCCAGGTGGGTCTGGGCGACACTGGTTTTGCTTTGACTaGGAGATGGTCCATGAGATCGGAGATGGCCTTCAGATGATGATT +
Preference number: 5 (lower is better)
Translates to: LHLPGGSGRHWFCFD*EMVHEIGDGLQMMI
Trigger: AATCATCATCTGAAGGCCATCTCCGATCTCATGGACCATCTCGCAGTCAAAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGATGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp ACCAGATCTTTTGGGGGTGATCCCAAGGGCCAACTTGTAATGGCTTaGGCAGCAGAAGAATCTGTTGGAGTCCCAGGTTCAGAGGGCAAT +
Preference number: 5 (lower is better)
Translates to: TRSFGGDPKGQLVMA*AAEESVGVPGSEGN
Trigger: ATTGCCCTCTGAACCTGGGACTCCAACAGATTCTTCTGCTGCCCAAGCCATTACAAGTTGGCCCTTGGGATCACCCCCAAAAGATCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp CTGAGTCACACCGTCAGACTGAACCGTGTACCATCCTTGGCTCTGTaGTATTTCAATGGCTACCACAGTAGACGCTGTTGTGGTGGCATC +
Preference number: 5 (lower is better)
Translates to: LSHTVRLNRVPSLAL*YFNGYHSRRCCGGI
Trigger: GATGCCACCACAACAGCGTCTACTGTGGTAGCCATTGAAATACCACAGAGCCAAGGATGGTACACGGTTCAGTCTGACGGTGTGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp CTGCGACTGTTTGAACTGCTACACTGGAGACTTTGGAAGGGGGTTTaGTCTTGTCACCCTCTGCCGTGCTATCTCCGTATTTCCCTGTTC +
Preference number: 5 (lower is better)
Translates to: LRLFELLHWRLWKGV*SCHPLPCYLRISLF
Trigger: GAACAGGGAAATACGGAGATAGCACGGCAGAGGGTGACAAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAGCAGTTCAAACAGTCGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp CACTGCTGTATGGCTTATCTGCTTCATCCTGTAGAGCCGACCGGATaGTATTTCCTAACGTGCCCAGTCCTGACCCAAGTGATGAACCCA +
Preference number: 5 (lower is better)
Translates to: HCCMAYLLHPVEPTG*YFLTCPVLTQVMNP
Trigger: TGGGTTCATCACTTGGGTCAGGACTGGGCACGTTAGGAAATACCATCCGGTCGGCTCTACAGGATGAAGCAGATAAGCCATACAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGCGGGGACGCTTCCCTaGGGCAGCCCCTGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQAGTLP*GSPCAL
Trigger: AAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCGC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGCGGGGACGCTTCCCTaGGGCAGCCCCTGCGCCCTT +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKAGTLP*GSPCAL
Trigger: AAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCGC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCTTTGCTGGCCCTGGTaGCTGGACTGTGGCCTTTGC +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVLCWPW*LDCGLC
Trigger: GCAAAGGCCACAGTCCAGCAACCAGGGCCAGCAAAG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATTTTGTGGCAACAGGTaGTTGAGGCTGGGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLFCGNR*LRLGLC
Trigger: GCAAAGCCCCAGCCTCAACAACCTGTTGCCACAAAA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTGCTGGAGTTGGGTGTaGAGGCTGGGGCTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVCWSWV*RLGLCW
Trigger: CCAGCAAAGCCCCAGCCTCAACACCCAACTCCAGCA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGTACTGAGGCAGCCTTaGGGGTTGGCTGCGGTGAGG +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPVLRQP*GLAAVR
Trigger: CCTCACCGCAGCCAACCCCAAAGGCTGCCTCAGTAC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCAGGGGCCGTTGTCACTaGAGCCTGTGCCTGCACTTG +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSRGRCH*SLCLHL
Trigger: CAAGTGCAGGCACAGGCTCAAGTGACAACGGCCCCT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATACTGGGTGGCGTCTTaGGTCTTTCTCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLYWVAS*VFLSSS
Trigger: AGAGGAGGAGAGAAAGACCAAAGACGCCACCCAGTA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTGTCAAAGATGCGTCTaGTACCCTGTCAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASCQRCV*YPVKVQ
Trigger: CTGGACTTTGACAGGGTACAAGACGCATCTTTGACA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTGTTCTCGGAACCTTaGAATCTCCTGACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASLFSEP*NLLTFP
Trigger: TGGGAACGTCAGGAGATTCAAAGGTTCCGAGAACAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACTGCTGATGGAGCTGTaGTTGCAGCTGTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLLLMEL*LQLLDL
Trigger: CAGATCCAACAGCTGCAACAACAGCTCCATCAGCAG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCTGTTCAGTGGTGGTTaGTGGAGAAGCAGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLFSGG*WRSSPR
Trigger: TCTGGGACTGCTTCTCCACAAACCACCACTGAACAG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCTACACTGGAGACTTaGGAAGGGGGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWATLET*EGGLVL
Trigger: CAAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTATCTCTGCGACTGTTaGAACTGCTACACTGGAGAC +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAYLCDC*NCYTGD
Trigger: GTCTCCAGTGTAGCAGTTCAAACAGTCGCAGAGATA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTCCCAATGGCTCAGTTaGCACAGATATCTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGSQWLS*HRYLCD
Trigger: GTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCATTGTGTGTAAGGACTaGTCGGAGGAACTAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASIVCKD*SEELAE
Trigger: CTCAGCTAGTTCCTCCGACAAGTCCTTACACACAAT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGGTTTGCCGAGGCTTTaGTTGTATCACCATCATCTG +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASGLPRL*LYHHHL
Trigger: CAGATGATGGTGATACAACAAAAGCCTCGGCAAACC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGGTTTGCCGAGGCTTTaGTTGTATCACCATCATCTG +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAGLPRL*LYHHHL
Trigger: CAGATGATGGTGATACAACAAAAGCCTCGGCAAACC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACCGCCGTGCTTCTTTTaGCTTACTGAAGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLPPCFF*LTEGDP
Trigger: AGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCGG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp AGCTGTTGTTGCAGCTGTTGGATCTGCTCAAGTTGTAACTGTTGTTaGGCTAGCGTCTCCTGTCTCATCATGAACTGGGCCTGCCGCTCT +
Preference number: 5 (lower is better)
Translates to: SCCCSCWICSSCNCC*ASVSCLIMNWACRS
Trigger: AGAGCGGCAGGCCCAGTTCATGATGAGACAGGAGACGCTAGCTCAACAACAGTTACAACTTGAGCAGATCCAACAGCTGCAACAACAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp GCTGCTGAAGATGGGCTATCTGTGAGTGTCTCTGTCGTCTTCGGTTaGTTTGGTTCAACATCTGCAACAGGGGCCTTTGCTTGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: AAEDGLSVSVSVVFG*FGSTSATGAFACSG
Trigger: ACCTGAACAAGCAAAGGCCCCTGTTGCAGATGTTGAACCAAAGCAACCGAAGACGACAGAGACACTCACAGATAGCCCATCTTCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp AGCATCAGCATGGGCCGTAACAATAGCAGTTGGAGCCACTGGAGCTaGAGCTGCCAACTTTCTTTTAGGATAAGTGGGTGGCTTAGGAGA +
Preference number: 5 (lower is better)
Translates to: SISMGRNNSSWSHWS*SCQLSFRISGWLRR
Trigger: TCTCCTAAGCCACCCACTTATCCTAAAAGAAAGTTGGCAGCTGCAGCTCCAGTGGCTCCAACTGCTATTGTTACGGCCCATGCTGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp CCAAAACTGACTGCCCTCTGTAGCAACATACTGACCCTCCAAAATTaGCTGTTCAGTGGTGGTTTGTGGAGAAGCAGTCCCAGAGGGTTC +
Preference number: 5 (lower is better)
Translates to: PKLTALCSNILTLQN*LFSGGLWRSSPRGF
Trigger: GAACCCTCTGGGACTGCTTCTCCACAAACCACCACTGAACAGGCAATTTTGGAGGGTCAGTATGTTGCTACAGAGGGCAGTCAGTTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp GGGACTGCTGGCTGTTTTGACTGGAGTGAGACTTGCCATGCTCAATaGTTTCAGTCTGTTCTTTCAGCGGATACCACCGAGGAGTGTTGT +
Preference number: 5 (lower is better)
Translates to: GTAGCFDWSETCHAQ*FQSVLSADTTEECC
Trigger: ACAACACTCCTCGGTGGTATCCGCTGAAAGAACAGACTGAAAGCATTGAGCATGGCAAGTCTCACTCCAGTCAAAACAGCCAGCAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp CGTGTCTGTTGTTTTCTGTGTAGTCACTGGAATCTCAGGGACTGCTaGCTTGGGGGCAATTGGAGGTTTGCTTGCCTCTGGTCTATGTGT +
Preference number: 5 (lower is better)
Translates to: RVCCFLCSHWNLRDC*LGGNWRFACLWSMC
Trigger: ACACATAGACCAGAGGCAAGCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGAGATTCCAGTGACTACACAGAAAACAACAGACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp AACATCTGTCAGAGGTATCTCCGAAACAGTGCTCAAGATGCCAGGTaGGGCAATGTACTGAGTCACACCGTCAGACTGAACCGTGTACCA +
Preference number: 5 (lower is better)
Translates to: NICQRYLRNSAQDAR*GNVLSHTVRLNRVP
Trigger: TGGTACACGGTTCAGTCTGACGGTGTGACTCAGTACATTGCCCCACCTGGCATCTTGAGCACTGTTTCGGAGATACCTCTGACAGATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp GATCCTCCATCGAATCCTCCTCTGCCTTCACATAGCTATGCAGTCTaGAGGAAGTCTGCAAAGGCGCTAGGAAGTCTGTCACTTCTTGAG +
Preference number: 5 (lower is better)
Translates to: DPPSNPPLPSHSYAV*RKSAKALGSLSLLE
Trigger: CTCAAGAAGTGACAGACTTCCTAGCGCCTTTGCAGACTTCCTCCAGACTGCATAGCTATGTGAAGGCAGAGGAGGATTCGATGGAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGAGGTGAAGGCTTTGTaGGACCAGGCTGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSEVKAL*DQAAEL
Trigger: CAGCTCAGCAGCCTGGTCCAACAAAGCCTTCACCTC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGTTGAGGCTGAGGTTTaGTGGCAACAGGTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWVEAEV*WQQVVE
Trigger: CTCAACAACCTGTTGCCACAAAACCTCAGCCTCAAC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATGCTGGGGCTGGCTGTaGAGGCTGAGGTTTTGTGGC +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPCWGWL*RLRFCG
Trigger: GCCACAAAACCTCAGCCTCAACAGCCAGCCCCAGCA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGAGAAGTTGGTGGTGCTaGCAGAGGTCTTCCTGTTAC +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWRSWWC*QRSSCY
Trigger: GTAACAGGAAGACCTCTGCAAGCACCACCAACTTCT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCCTGTGCTGCAGAAGTaGGTGGTGCTTGCAGAGGTC +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSPVLQK*VVLAEV
Trigger: GACCTCTGCAAGCACCACCAACTTCTGCAGCACAGG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTATGGAAGTTCCTTCTTaGGGGAAGCCTGCTGTGACG +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSMEVPS*GKPAVT
Trigger: CGTCACAGCAGGCTTCCCCAAAGAAGGAACTTCCAT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCTGCAGAAGGCTTCTaGGGAGGGGCTGGCTTAGGT +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFAAEGF*GGAGLG
Trigger: ACCTAAGCCAGCCCCTCCCAAGAAGCCTTCTGCAGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTAGGGGTCACCTTGGTTaGTGCTTTCTTAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSRGHLG*CFLRLL
Trigger: GAGGAGCCTAAGAAAGCACAAACCAAGGTGACCCCT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGGTTTAGGGGTCACCTaGGTTTGTGCTTTCTTAGGC +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWGLGVT*VCAFLG
Trigger: GCCTAAGAAAGCACAAACCAAGGTGACCCCTAAACC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGTGTTGGGGATCCTTTaGGTACTGGCTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGVLGIL*VLALYL
Trigger: CAGATACAAAGCCAGTACCAAAAGGATCCCCAACAC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAAGACTGGGGTGTGGCTaGGCCAGTCGTAGGTCGTGT +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPRLGCG*ASRRSC
Trigger: ACACGACCTACGACTGGCCAAGCCACACCCCAGTCT...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTCACAGCAGTCGTCTaGGCAGGTGCTGATGGGTGC +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVFTAVV*AGADGC
Trigger: GCACCCATCAGCACCTGCCAAGACGACTGCTGTGAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCAAGTTGTCCTGATATaGCTCTCTGTGTCTGACAGT +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASQVVLI*LSVSDS
Trigger: ACTGTCAGACACAGAGAGCAATATCAGGACAACTTG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTTTCTGTCCTGTCTTaGCTGGGCTCCCCTCGGCCT +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVFSVLS*LGSPRP
Trigger: AGGCCGAGGGGAGCCCAGCAAAGACAGGACAGAAAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACACCTACAAGTGTGCTaGCCTGAGCTTCCAAAATGG +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLHLQVC*PELPKW
Trigger: CCATTTTGGAAGCTCAGGCAAGCACACTTGTAGGTG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTTCCATTTTGTTCATCTaGCCTGGTGAGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSSILFI*PGEQAA
Trigger: GGCAGCCTGCTCACCAGGCAAGATGAACAAAATGGA...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGGAAATCGTGTCAGCTaGTGGCCTCTCAGGTTTAGT +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLGNRVS*WPLRFS
Trigger: ACTAAACCTGAGAGGCCACAAGCTGACACGATTTCC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCAGATGTATATAGGGTaGGCTGTGAAGCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAQMYIG*AVKHLE
Trigger: TTCCAAGTGCTTCACAGCCAACCCTATATACATCTG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGCCTTTTCACATCCATaGCAGAAGCAGAAAGATCCA +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASAFSHP*QKQKDP
Trigger: TGGATCTTTCTGCTTCTGCAATGGATGTGAAAAGGC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAAACTCCCGAAATGACTaGGCGTGTTTCTGGGTATGG +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLNSRND*ACFWVW
Trigger: CCATACCCAGAAACACGCCAAGTCATTTCGGGAGTT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCTTAATTATTTCTACCTaGGCATCCACCCGTGCTCGT +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASLIIST*ASTRAR
Trigger: ACGAGCACGGGTGGATGCCAAGGTAGAAATAATTAA...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGGGCGTTTCTTGTCTTaGGGTGGAGATGTGGCACCC +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSGRFLS*GGDVAP
Trigger: GGGTGCCACATCTCCACCCAAAGACAAGAAACGCCC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTAACTTTCGTCTGCTGTaGGACTCAGAGGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSNFRLL*DSEAWG
Trigger: ACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCTCGAGCCATGGTATaGGTTCTGCACATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWARAMV*VLHILL
Trigger: GAGAAGAATGTGCAGAACCAATACCATGGCTCGAGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTCTGAGGAGCTGTTCTaGGCCGCTCAATGCCGTGCT +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVSEELF*AAQCRA
Trigger: AGCACGGCATTGAGCGGCCAAGAACAGCTCCTCAGA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAGCAATCATCAGGGGTaGGTTGCGAATCACTTCATA +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASSNHQG*VANHFI
Trigger: TATGAAGTGATTCGCAACCAACCCCTGATGATTGCT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCAGATATGCTTGATATaGGACTGCTTGCCATACTGC +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAQICLI*DCLPYC
Trigger: GCAGTATGGCAAGCAGTCCAATATCAAGCATATCTG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTAAAGCTGCTGTCCCTTaGGTAATGTCTCCAATGTCA +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAKAAVP*VMSPMS
Trigger: TGACATTGGAGACATTACCAAAGGGACAGCAGCTTT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGCCCCTACGGAATTCTaGCTTAATCTGATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASAPTEF*LNLMFQ
Trigger: CTGAAACATCAGATTAAGCAAGAATTCCGTAGGGGC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTGGTTGAATGCGGAGTaGCTGCACAGCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVWLNAE*LHSGFS
Trigger: GCTGAAGCCGCTGTGCAGCAACTCCGCATTCAACCA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS TCA 90 bp TTTCAAGCTAATAGTGGACGGGCTCCTTCCAGGCAGCTTCTGCTCTaGCCTAAACGTGTCCGTAGTTCTGCTTTTGCTAAGACCATGCTG +
Preference number: 5 (lower is better)
Translates to: FQANSGRAPSRQLLL*PKRVRSSAFAKTML
Trigger: CAGCATGGTCTTAGCAAAAGCAGAACTACGGACACGTTTAGGTCAGAGCAGAAGCTGCCTGGAAGGAGCCCGTCCACTATTAGCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp TTAGGGGTCACCTTGGTTTGTGCTTTCTTAGGCTCCTCCTTCTTCTaGACTGGATCCTTGCTCTCAGAAGTGGGCCCAGGATGTGAAACA +
Preference number: 5 (lower is better)
Translates to: LGVTLVCAFLGSSFF*TGSLLSEVGPGCET
Trigger: TGTTTCACATCCTGGGCCCACTTCTGAGAGCAAGGATCCAGTTCAGAAGAAGGAGGAGCCTAAGAAAGCACAAACCAAGGTGACCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp AGTGAAGCCACTTTGCCTATGGGTCCTTCTTCGGGAATTTGTACGTaGGCTTTAAGTAGATCACGTTTCTCCTCCCCCTCTGAGGCCGAT +
Preference number: 5 (lower is better)
Translates to: SEATLPMGPSSGICT*ALSRSRFSSPSEAD
Trigger: ATCGGCCTCAGAGGGGGAGGAGAAACGTGATCTACTTAAAGCTCACGTACAAATTCCCGAAGAAGGACCCATAGGCAAAGTGGCTTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp GCTCAAGTTGTAACTGTTGTTGAGCTAGCGTCTCCTGTCTCATCATaGACTGGGCCTGCCGCTCTTCCTCTTGTTGATAGAGAAGGTGCT +
Preference number: 5 (lower is better)
Translates to: AQVVTVVELASPVSS*TGPAALPLVDREGA
Trigger: AGCACCTTCTCTATCAACAAGAGGAAGAGCGGCAGGCCCAGTTCATGATGAGACAGGAGACGCTAGCTCAACAACAGTTACAACTTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp AGTCTGGAGGAAGTCTGCAAAGGCGCTAGGAAGTCTGTCACTTCTTaGGACCTCCGTGTCTCAGTGGTTCTAAGGAGACGATCTGTTTTG +
Preference number: 5 (lower is better)
Translates to: SLEEVCKGARKSVTS*DLRVSVVLRRRSVL
Trigger: CAAAACAGATCGTCTCCTTAGAACCACTGAGACACGGAGGTCTCAAGAAGTGACAGACTTCCTAGCGCCTTTGCAGACTTCCTCCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp TCCCAATGGCTCAGTTTGCACAGATATCTCTGCGACTGTTTGAACTaGTACACTGGAGACTTTGGAAGGGGGTTTGGTCTTGTCACCCTC +
Preference number: 5 (lower is better)
Translates to: SQWLSLHRYLCDCLN*YTGDFGRGFGLVTL
Trigger: GAGGGTGACAAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp AGTACCAGAGGTTGTTTGGGAACCTTTAGCCTTGGCATCCACCCGTaGTCGTATGGAAGGTGTTCTTATGGTTCCCAATGGCTCAGTTTG +
Preference number: 5 (lower is better)
Translates to: STRGCLGTFSLGIHP*SYGRCSYGSQWLSL
Trigger: CAAACTGAGCCATTGGGAACCATAAGAACACCTTCCATACGAGCACGGGTGGATGCCAAGGCTAAAGGTTCCCAAACAACCTCTGGTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
CDS CCA 90 bp TCTTCTTCCTCGGAAGAATCTTCAATGGTAGGTAAAAGAGGGCCATaGGACCTGTGCCGAGCTTTGCGCTGCTGCTTGCTTTCTCCTTTT +
Preference number: 5 (lower is better)
Translates to: SSSSEESSMVGKRGP*DLCRALRCCLLSPF
Trigger: AAAAGGAGAAAGCAAGCAGCAGCGCAAAGCTCGGCACAGGTCCCATGGCCCTCTTTTACCTACCATTGAAGATTCTTCCGAGGAAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp AGGAATAGCATCAGCATGGGCCGTAACAATAGCAGTTGGAGCCACTaGAGCTGCAGCTGCCAACTTTCTTTTAGGATAAGTGGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: RNSISMGRNNSSWSH*SCSCQLSFRISGWL
Trigger: AAGCCACCCACTTATCCTAAAAGAAAGTTGGCAGCTGCAGCTCCAGTGGCTCCAACTGCTATTGTTACGGCCCATGCTGATGCTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp TCCCAAGGGCCAACTTGTAATGGCTTGGGCAGCAGAAGAATCTGTTaGAGTCCCAGGTTCAGAGGGCAATGTAATGACCACATAAGTCTC +
Preference number: 5 (lower is better)
Translates to: SQGPTCNGLGSRRIC*SPRFRGQCNDHISL
Trigger: GAGACTTATGTGGTCATTACATTGCCCTCTGAACCTGGGACTCCAACAGATTCTTCTGCTGCCCAAGCCATTACAAGTTGGCCCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp GGCATCCACCCGTGCTCGTATGGAAGGTGTTCTTATGGTTCCCAATaGCTCAGTTTGCACAGATATCTCTGCGACTGTTTGAACTGCTAC +
Preference number: 5 (lower is better)
Translates to: GIHPCSYGRCSYGSQ*LSLHRYLCDCLNCY
Trigger: GTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGAACCATAAGAACACCTTCCATACGAGCACGGGTGGATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp CATCTTGGCTGTCTTAGGGCTTGCCGGGGGAACTTTAGCCATATCTaGATGGAGTACTTTCTGTGGACTTATGTCATCAGGGAGGGGTTT +
Preference number: 5 (lower is better)
Translates to: HLGCLRACRGNFSHI*MEYFLWTYVIREGF
Trigger: AAACCCCTCCCTGATGACATAAGTCCACAGAAAGTACTCCATCCAGATATGGCTAAAGTTCCCCCGGCAAGCCCTAAGACAGCCAAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp TCCCATTACTTGAGTTTTAGCCTCCGTGTCTGCTGCTCCCATTCCTaGCTGTTTCACAGGGTCTTGGCCATTCTGTCCCATCTTTCCTAT +
Preference number: 5 (lower is better)
Translates to: SHYLSFSLRVCCSHS*LFHRVLAILSHLSY
Trigger: ATAGGAAAGATGGGACAGAATGGCCAAGACCCTGTGAAACAGCCAGGAATGGGAGCAGCAGACACGGAGGCTAAAACTCAAGTAATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGACTACTATCCAACTCTaGTTTCCTGTGCATGGAGGG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWTTIQL*FPVHGG
Trigger: CCCTCCATGCACAGGAAACAAGAGTTGGATAGTAGT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACGGTGGCTTTCCGGGTaGCTGTGGAGCCTGACTACT +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLRWLSG*LWSLTT
Trigger: AGTAGTCAGGCTCCACAGCAACCCGGAAAGCCACCG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATTCCTTCCCTGGTCCTaGCTGTTTAGGGATCAACTT +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLFLPWS*LFRDQL
Trigger: AAGTTGATCCCTAAACAGCAAGGACCAGGGAAGGAA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATCTGCTGGGAAGGTTTaGCTGTGCCAGGGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSAGKV*LCQGLV
Trigger: CACAAGCCCCTGGCACAGCAAAACCTTCCCAGCAGA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTGCTGAGCTGGTGTTaGGGCTGGACTCTGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPLLSWC*GWTLLG
Trigger: TCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGTTGGGCTACAGGTTTaGCTTGCTGAGCTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSVGLQV*LAELVF
Trigger: AAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAAC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTGCAGGTCCAGGCTGTaGGGCTACAGGTTTTGCTTG +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSCRSRL*GYRFCL
Trigger: CAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCTGAGGTGAAGGCTTaGTTGGACCAGGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFAEVKA*LDQAAE
Trigger: CTCAGCAGCCTGGTCCAACAAAGCCTTCACCTCAGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGTTGAGGCTGGGGCTTaGCTGGAATGGGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLVEAGA*LEWAAE
Trigger: CTCAGCAGCCCATTCCAGCAAAGCCCCAGCCTCAAC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGTTGAGGCTGGGGCTTaGCTGGAGTTGGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLVEAGA*LELGAE
Trigger: CTCAGCACCCAACTCCAGCAAAGCCCCAGCCTCAAC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGTTGAGGCTGGGGCTTaGCTGGAGTTGGCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPVEAGA*LELAVE
Trigger: CTCAACAGCCAACTCCAGCAAAGCCCCAGCCTCAAC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGTTGAGGCTGGGGCTTaGCTGGGGTGGGCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSVEAGA*LGWAVE
Trigger: CTCAACAGCCCACCCCAGCAAAGCCCCAGCCTCAAC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTAGGCAGCCTTTGGGGTaGGCTGCGGTGAGGATGGGA +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSRQPLG*AAVRMG
Trigger: TCCCATCCTCACCGCAGCCAACCCCAAAGGCTGCCT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGACGGTACAGGTGATTaGCTGGCTGTTGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSDGTGD*LAVAGC
Trigger: ACAGCCAGCAACAGCCAGCAAATCACCTGTACCGTC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTTGGGGCTGTCCTGTTaGGATGGAAGTTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLGLSC*DGSSFF
Trigger: AAAGAAGGAACTTCCATCCAAACAGGACAGCCCCAA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCAGCTGCCGGGCCTTTaGTTTCCTTCTTCACAGCAG +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVQLPGL*FPSSQQ
Trigger: CTGCTGTGAAGAAGGAAACAAAAGGCCCGGCAGCTG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGGAGCTTGCACAGGTTaGGCCTCTAAGTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSGACTG*ASKFSA
Trigger: AGCTGAAAACTTAGAGGCCAAACCTGTGCAAGCTCC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGCCAGTGAAGCCACTTaGCCTATGGGTCCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSASEAT*PMGPSS
Trigger: CGAAGAAGGACCCATAGGCAAAGTGGCTTCACTGGC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTTCGTCTCGTTCATTaGCAGCTGGAAAAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLALRLVH*QLEKLY
Trigger: ATAAAGCTTTTCCAGCTGCAAATGAACGAGACGAAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCTCCAGAAAGGATACTaGATGTCAAAGATGCGTCTT +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRALQKGY*MSKMRL
Trigger: AAGACGCATCTTTGACATCAAGTATCCTTTCTGGAG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATCAGGGACTGCTGGCTaGGGGGCAATTGGAGGTTTG +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSGTAG*GAIGGL
Trigger: CAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTTTGGACAGCACTAATTaGTCGCCTGTAAACCTCATT +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRALDSTN*SPVNLI
Trigger: AATGAGGTTTACAGGCGACAAATTAGTGCTGTCCAA...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTTCCATAGTAATAGTTaGCAGGCTGGCATTGATGTC +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAFHSNS*QAGIDV
Trigger: GACATCAATGCCAGCCTGCAAACTATTACTATGGAA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTAGTTGCTGTTGTTGTTaGTCTTCATCAGGGACAATC +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLASCCCC*SSSGTI
Trigger: GATTGTCCCTGATGAAGACAAACAACAACAGCAACT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGTCAAGTTGCTGTTGTaGTTTGTCTTCATCAGGGAC +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGVKLLL*FVFIRD
Trigger: GTCCCTGATGAAGACAAACAACAACAGCAACTTGAC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTCTCAGCAAAGCGTTGTaGCTTAATTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLALSKAL*LNFLQF
Trigger: GAACTGGAGAAAATTAAGCAACAACGCTTTGCTGAG...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCTCAGCAAAGCGTTGTaGCTTAATTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRALSKAL*LNFLQF
Trigger: GAACTGGAGAAAATTAAGCAACAACGCTTTGCTGAG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCAACCGTGTACCATCCTaGGCTCTGTGGTATTTCAAT +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGNRVPS*ALWYFN
Trigger: ATTGAAATACCACAGAGCCAAGGATGGTACACGGTT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGATGTCCTGGAGAATTTaGGCTCGAGCCATGGTATTG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWMSWRI*ARAMVL
Trigger: CAATACCATGGCTCGAGCCAAAATTCTCCAGGACAT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATGGAGTTGGGGTAGGTaGAGCCTGGGGTGTGAAGGA +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPWSWGR*SLGCEG
Trigger: TCCTTCACACCCCAGGCTCAACCTACCCCAACTCCA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCCTCAAGTCTAAACTATaGTACTTACTCCCGAGATGG +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASLKSKL*YLLPRW
Trigger: CCATCTCGGGAGTAAGTACAATAGTTTAGACTTGAG...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTTTGATATTGGACTGCTaGCCATACTGCTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLALILDC*PYCFFP
Trigger: AGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAA...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCATCCAAATTGATCCCTaGTATCTGCAGATATGGGCG +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGIQIDP*YLQIWA
Trigger: CGCCCATATCTGCAGATACAAGGGATCAATTTGGAT...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTGAAAGATGTAGTGCATaGTCTTCCCATTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAERCSA*SSHSSA
Trigger: TGCAGATGAATGGGAAGACAATGCACTACATCTTTC...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTTCTGCTTCCCCACTTaGCTGATTAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGFCFPT*LINDAL
Trigger: CAGAGCATCATTAATCAGCAAAGTGGGGAAGCAGAA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCAGGAAACATCATACATaGCAACCGCAACTTCACTGT +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASRKHHT*QPQLHC
Trigger: ACAGTGAAGTTGCGGTTGCAATGTATGATGTTTCCT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTGCGTCTTTTACTTGGTaGAATGCGGAGTTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSASFTW*NAELLH
Trigger: GTGCAGCAACTCCGCATTCAACCAAGTAAAAGACGC...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCATTTGCGTCTTTTACTaGGTTGAATGCGGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASICVFY*VECGVA
Trigger: AGCAACTCCGCATTCAACCAAGTAAAAGACGCAAAT...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTATTTGCGTCTTTTACTaGGTTGAATGCGGAGTTGCT +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAICVFY*VECGVA
Trigger: AGCAACTCCGCATTCAACCAAGTAAAAGACGCAAAT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp TCTATAATCTGCTTTCGAATGAAGTCCTCGTCTTCCCCCGAGCCTTaGCTGTCTTCCTGCTTATACTCCTCGCTGCTTGATGAGCCAATG +
Preference number: 5 (lower is better)
Translates to: SIICFRMKSSSSPEP*LSSCLYSSLLDEPM
Trigger: CATTGGCTCATCAAGCAGCGAGGAGTATAAGCAGGAAGACAGTCAAGGCTCGGGGGAAGACGAGGACTTCATTCGAAAGCAGATTATAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp GTCCTTCTCTTGTACTCAACACTTGCATTCTGGACAACCATGACTTaGCCTCGTCCTGGAAGTAGGTACACCTTCACAAATGGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: VLLLYSTLAFWTTMT*PRPGSRYTFTNGSE
Trigger: CTCGGACCCATTTGTGAAGGTGTACCTACTTCCAGGACGAGGTCAAGTCATGGTTGTCCAGAATGCAAGTGTTGAGTACAAGAGAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp GATTCTTTCAAGCTAATAGTGGACGGGCTCCTTCCAGGCAGCTTCTaGTCTGACCTAAACGTGTCCGTAGTTCTGCTTTTGCTAAGACCA +
Preference number: 5 (lower is better)
Translates to: DSFKLIVDGLLPGSF*SDLNVSVVLLLLRP
Trigger: TGGTCTTAGCAAAAGCAGAACTACGGACACGTTTAGGTCAGAGCAGAAGCTGCCTGGAAGGAGCCCGTCCACTATTAGCTTGAAAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp TCCTTCCCTGGTCCTTGCTGTTTAGGGATCAACTTGGGTGATGGTTaGTGTAAGGAAGGTTTTGTGATTCCTTCCGATTTCCCTTGGTCC +
Preference number: 5 (lower is better)
Translates to: SFPGPCCLGINLGDG*CKEGFVIPSDFPWS
Trigger: GGACCAAGGGAAATCGGAAGGAATCACAAAACCTTCCTTACAGCAACCATCACCCAAGTTGATCCCTAAACAGCAAGGACCAGGGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp CAATCTCTAAAGGTGTTGGGCGTTTCTTGTCTTTGGGTGGAGATGTaGCACCCATATATGGAGGGCTCTGTGTGTCTGGATCTGTTTCTG +
Preference number: 5 (lower is better)
Translates to: QSLKVLGVSCLWVEM*HPYMEGSVCLDLFL
Trigger: CAGAAACAGATCCAGACACACAGAGCCCTCCATATATGGGTGCCACATCTCCACCCAAAGACAAGAAACGCCCAACACCTTTAGAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp TTGGCAGACTCTCTTTCCACGAGGTCAAGCTCTCGGTCTATGTCCTaGAGAATTTTGGCTCGAGCCATGGTATTGGTTCTGCACATTCTT +
Preference number: 5 (lower is better)
Translates to: LADSLSTRSSSRSMS*RILARAMVLVLHIL
Trigger: AAGAATGTGCAGAACCAATACCATGGCTCGAGCCAAAATTCTCCAGGACATAGACCGAGAGCTTGACCTCGTGGAAAGAGAGTCTGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp CGGAGATGGCCTTCAGATGATGATTTTGAACTACCAGGACTACTGTaGGATTTCTCAATGGTGGGAACCTGCATATCCTTGGATGGGTCG +
Preference number: 5 (lower is better)
Translates to: RRWPSDDDFELPGLL*DFSMVGTCISLDGS
Trigger: CGACCCATCCAAGGATATGCAGGTTCCCACCATTGAGAAATCCCACAGTAGTCCTGGTAGTTCAAAATCATCATCTGAAGGCCATCTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGGCTACAGGTTTTGCTaGCTGAGCTGGTGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPGYRFC*LSWCLG
Trigger: GCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGGCTGTCACTGGAGGTaGTGCTGGGGACTTCCCTGT +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSGCHWR*CWGLPC
Trigger: ACAGGGAAGTCCCCAGCACAACCTCCAGTGACAGCC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATCTGAGCTAGAGACTTaGGCCCAGGCTGCTGCAATG +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSELET*AQAAAM
Trigger: CATTGCAGCAGCCTGGGCCAAAGTCTCTAGCTCAGA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGCTGAGGTGAAGGCTTaGTTGGACCAGGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLAEVKA*LDQAAE
Trigger: CTCAGCAGCCTGGTCCAACAAAGCCTTCACCTCAGC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATGTGGCAACAGGTTGTaGAGGCTGGGGCTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLCGNRL*RLGLCW
Trigger: CCAGCAAAGCCCCAGCCTCAACAACCTGTTGCCACA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAGCGTACATGTGTTAAAATaGGCCTTTTCTGGAGTATGC +
Preference number: 5 (lower is better)
Translates to: SPPSGLTGPSDITFLRASVHVLK*AFSGVC
Trigger: GCATACTCCAGAAAAGGCCAATTTTAACACATGTAC...GCTAGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGCGGTGAGGATGGGATaGCTGCCAGTTCACCTCCCA +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSAVRMG*LPVHLP
Trigger: TGGGAGGTGAACTGGCAGCAATCCCATCCTCACCGC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGACGGTACAGGTGATTaGCTGGCTGTTGCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFDGTGD*LAVAGC
Trigger: ACAGCCAGCAACAGCCAGCAAATCACCTGTACCGTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGCTGCAGAAGGCTTCTaGGGAGGGGCTGGCTTAGGT +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSAAEGF*GGAGLG
Trigger: ACCTAAGCCAGCCCCTCCCAAGAAGCCTTCTGCAGC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCAGTTTCTTGAGGAGTaGTGGGCTGTGATTTGGGGG +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSQFLEE*WAVIWG
Trigger: CCCCCAAATCACAGCCCACAACTCCTCAAGAAACTG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCAGCTGCCGGGCCTTTaGTTTCCTTCTTCACAGCAG +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFQLPGL*FPSSQQ
Trigger: CTGCTGTGAAGAAGGAAACAAAAGGCCCGGCAGCTG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGCGGGGTTTTCTCAATaGATGGTGTTTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWAGFSQ*MVFLSL
Trigger: CAGAGAAAGAAACACCATCAATTGAGAAAACCCCGC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGCCAGTGAAGCCACTTaGCCTATGGGTCCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFASEAT*PMGPSS
Trigger: CGAAGAAGGACCCATAGGCAAAGTGGCTTCACTGGC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGACCTGTGCCGAGCTTaGCGCTGCTGCTTGCTTTCT +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLDLCRA*RCCLLS
Trigger: AGAAAGCAAGCAGCAGCGCAAAGCTCGGCACAGGTC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTACTGGGTGGCGTCTTaGGTCTTTCTCTCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVYWVAS*VFLSSS
Trigger: AGAGGAGGAGAGAAAGACCAAAGACGCCACCCAGTA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCCAACTTGTAATGGCTaGGGCAGCAGAAGAATCTGT +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSPTCNG*GSRRIC
Trigger: ACAGATTCTTCTGCTGCCCAAGCCATTACAAGTTGG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGGGAAACCAGATCTTTaGGGGGTGATCCCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLGKPDL*GVIPRA
Trigger: GGCCCTTGGGATCACCCCCAAAAGATCTGGTTTCCC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGAGGTGGAGTCATTCTaGCTGTGGAATACTGCGGGG +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFEVESF*LWNTAG
Trigger: CCCCGCAGTATTCCACAGCAAGAATGACTCCACCTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTTCTTCTTCTCCTACTaGCATAAGTCCGATCAGCAG +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWFFFSY*HKSDQQ
Trigger: CTGCTGATCGGACTTATGCAAGTAGGAGAAGAAGAA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGCTACACTGGAGACTTaGGAAGGGGGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSATLET*EGGLVL
Trigger: CAAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAGC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGAACGCTGCATCATCTaGGCTGTCTTAGGGCTTGCC +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPERCII*AVLGLA
Trigger: GGCAAGCCCTAAGACAGCCAAGATGATGCAGCGTTC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCCTCAGGAGGGGGATTaGGCAGTGTTCTCTTCACTT +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVPQEGD*AVFSSL
Trigger: AAGTGAAGAGAACACTGCCAAATCCCCCTCCTGAGG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAAGGAGACGATCTGTTTaGGACAGATCCTTTTCATGG +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLRRRSV*DRSFSW
Trigger: CCATGAAAAGGATCTGTCCAAAACAGATCGTCTCCT...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTATGGCTGCAGGCAATaGTTTGGCAGCTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWYGCRQ*FGSLFF
Trigger: GAAAAACAAGCTGCCAAACAATTGCCTGCAGCCATA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTAAATGTGATATCATCTaGAAGAAGCCTTGCCCTAGA +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRAKCDII*KKPCPR
Trigger: TCTAGGGCAAGGCTTCTTCAAGATGATATCACATTT...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTAAATGTGATATCATCTaGAAGAAGCCTTGCCCTAGA +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLAKCDII*KKPCPR
Trigger: TCTAGGGCAAGGCTTCTTCAAGATGATATCACATTT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTACCTTATCCACAACTTTaGGTGGCTCATGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLPYPQL*VAHEVP
Trigger: TGGAACTTCATGAGCCACCAAAAGTTGTGGATAAGG...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCCGCCGTGCTTCTTTTaGCTTACTGAAGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVPPCFF*LTEGDP
Trigger: AGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCGG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS TCA 90 bp GGACATGGTGGCCACAGCTTGGAAGGTTGGTTGAGTCTGATAAGGTaGCACTTGCTGATGGTACAATGTCTGCTGTTGAAAATGAGACTG +
Preference number: 5 (lower is better)
Translates to: GHGGHSLEGWLSLIR*HLLMVQCLLLKMRL
Trigger: CAGTCTCATTTTCAACAGCAGACATTGTACCATCAGCAAGTGTCACCTTATCAGACTCAACCAACCTTCCAAGCTGTGGCCACCATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp CAAGTTGCTGTTGTTGTTTGTCTTCATCAGGGACAATCAAAAGAGTaGTTTCCTCTCCAACCACCTCAGAAAACACCTCAGAGGCGGTGG +
Preference number: 5 (lower is better)
Translates to: QVAVVVCLHQGQSKE*FPLQPPQKTPQRRW
Trigger: CCACCGCCTCTGAGGTGTTTTCTGAGGTGGTTGGAGAGGAAAGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp CTCTACAGTAGGAATAGCATCAGCATGGGCCGTAACAATAGCAGTTaGAGCCACTGGAGCTGCAGCTGCCAACTTTCTTTTAGGATAAGT +
Preference number: 5 (lower is better)
Translates to: LYSRNSISMGRNNSS*SHWSCSCQLSFRIS
Trigger: ACTTATCCTAAAAGAAAGTTGGCAGCTGCAGCTCCAGTGGCTCCAACTGCTATTGTTACGGCCCATGCTGATGCTATTCCTACTGTAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp AGCAACATACTGACCCTCCAAAATTGCCTGTTCAGTGGTGGTTTGTaGAGAAGCAGTCCCAGAGGGTTCGTAGTTATACTGGTAGATCTG +
Preference number: 5 (lower is better)
Translates to: SNILTLQNCLFSGGL*RSSPRGFVVILVDL
Trigger: CAGATCTACCAGTATAACTACGAACCCTCTGGGACTGCTTCTCCACAAACCACCACTGAACAGGCAATTTTGGAGGGTCAGTATGTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp TTTCTACCTTGGCATCCACCCGTGCTCGTATGGAAGGTGTTCTTATaGTTCCCAATGGCTCAGTTTGCACAGATATCTCTGCGACTGTTT +
Preference number: 5 (lower is better)
Translates to: FLPWHPPVLVWKVFL*FPMAQFAQISLRLF
Trigger: AAACAGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGAACCATAAGAACACCTTCCATACGAGCACGGGTGGATGCCAAGGTAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp AAGAAGAGTAACCAATCTCTAAAGGTGTTGGGCGTTTCTTGTCTTTaGGTGGAGATGTGGCACCCATATATGGAGGGCTCTGTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: KKSNQSLKVLGVSCL*VEMWHPYMEGSVCL
Trigger: CAGACACACAGAGCCCTCCATATATGGGTGCCACATCTCCACCCAAAGACAAGAAACGCCCAACACCTTTAGAGATTGGTTACTCTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACCCTGTCCCTGCTGGTaGAGCTGGGGACTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLPCPCW*SWGLCW
Trigger: CCAGCAAAGTCCCCAGCTCAACCAGCAGGGACAGGG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACTGTGGGCCAGGCTGTaGGGCTGGGAGTTTAGCTGT +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLWARL*GWEFSC
Trigger: ACAGCTAAACTCCCAGCCCAACAGCCTGGCCCACAG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGTTGAGGCTGGGGCTTaGCTGGAGTTGGGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSVEAGA*LELGVE
Trigger: CTCAACACCCAACTCCAGCAAAGCCCCAGCCTCAAC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCGGACATCACCTTCCTGAGGGCTAGCTGGCTTTGGTCTTGGTTGCCATTGGCTACAGAAACTAGGCTTTaGGTTACTTCACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: SDITFLRASWLWSWLPLATETRL*VTSLSS
Trigger: AGAAGAAAGTGAAGTAACCAAAAGCCTAGTTTCTGT...AGCCAATGGCAACCAAGACCAAAGCCAGCTAGCCCTCAGGAAGGTGATGTCCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGTCTTCCCCCGAGCCTaGACTGTCTTCCTGCTTATA +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPVFPRA*TVFLLI
Trigger: TATAAGCAGGAAGACAGTCAAGGCTCGGGGGAAGAC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACAGCAGAAGAATCTGTaGGAGTCCCAGGTTCAGAGG +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPQQKNL*ESQVQR
Trigger: CCTCTGAACCTGGGACTCCAACAGATTCTTCTGCTG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGAGGCTCTGGAGGAATaGGTATGGAAACACTCCTGG +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFEALEE*VWKHSW
Trigger: CCAGGAGTGTTTCCATACCAATTCCTCCAGAGCCTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTCACCTCCTTCTGGTTTGACTGGTCCATCGGACATCACCTTCCTGAGGGCTCTTCTGATTTTGGTATaGTACGCAAATCAATGGCAT +
Preference number: 5 (lower is better)
Translates to: CSPPSGLTGPSDITFLRALLILV*YANQWH
Trigger: ATGCCATTGATTTGCGTACAATACCAAAATCAGAAG...AGCCCTCAGGAAGGTGATGTCCGATGGACCAGTCAAACCAGAAGGAGGTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAACTCCCGAAATGACTaGGCGTGTTTCTGGGTATGG +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVNSRND*ACFWVW
Trigger: CCATACCCAGAAACACGCCAAGTCATTTCGGGAGTT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACTGTTCAGTGGTGGTTaGTGGAGAAGCAGTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPLFSGG*WRSSPR
Trigger: TCTGGGACTGCTTCTCCACAAACCACCACTGAACAG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGTTCTTCATCGTCAGTTaGTACACCACTGTCCACTAT +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWFFIVS*YTTVHY
Trigger: ATAGTGGACAGTGGTGTACAAACTGACGATGAAGAA...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGAAGGGGGTTTGGTCTaGTCACCCTCTGCCGTGCTA +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSEGGLV*SPSAVL
Trigger: TAGCACGGCAGAGGGTGACAAGACCAAACCCCCTTC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGGTGTTGGGCGTTTCTaGTCTTTGGGTGGAGATGTG +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFGVGRF*SLGGDV
Trigger: CACATCTCCACCCAAAGACAAGAAACGCCCAACACC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGTACAATGTCTGCTGTaGAAAATGAGACTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLVQCLL*KMRLLR
Trigger: ACGCAACAGTCTCATTTTCAACAGCAGACATTGTAC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTAAAGCTGCTGTCCCTTaGGTAATGTCTCCAATGTCA +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSKAAVP*VMSPMS
Trigger: TGACATTGGAGACATTACCAAAGGGACAGCAGCTTT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGCTGCAGGCAATTGTTaGGCAGCTTGTTTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVAAGNC*AACFSR
Trigger: CCTGGAAAAACAAGCTGCCAAACAATTGCCTGCAGC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCCCTGGCCATTCCCATaGGCTGGCCAACAGGACTTA +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSPWPFP*AGQQDL
Trigger: TAAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTAGTCAGACATAGCATGTaGGAAGTCATCCATGATGAA +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLVRHSM*EVIHDE
Trigger: TTCATCATGGATGACTTCCAACATGCTATGTCTGAC...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp TGTGAGAGAAGGTGTGTCAGAAGGTGGGACAGACGTAGCACTCTCTaGAGGCTCAGAGTAGGTCAATATCAGAGATTCATGGGCAATTAT +
Preference number: 5 (lower is better)
Translates to: CERRCVRRWDRRSTL*RLRVGQYQRFMGNY
Trigger: ATAATTGCCCATGAATCTCTGATATTGACCTACTCTGAGCCTTCAGAGAGTGCTACGTCTGTCCCACCTTCTGACACACCTTCTCTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp TGTAATGACCACATAAGTCTCCATGAGAGACTTAGAATATCTCGGTaGGGATTTATTCGAGTGTGGGGAAAGTGGAGAGGTAGGGGACGG +
Preference number: 5 (lower is better)
Translates to: CNDHISLHERLRISR*GFIRVWGKWRGRGR
Trigger: CCGTCCCCTACCTCTCCACTTTCCCCACACTCGAATAAATCCTCACCGAGATATTCTAAGTCTCTCATGGAGACTTATGTGGTCATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp GACTTTGATGTGCTGAGATCTACCACTTCTCCATCAGTGATCCCCTaGGATATGGTGCTGTCAGTCCATCCATTTGTAACACCAACAGGA +
Preference number: 5 (lower is better)
Translates to: DFDVLRSTTSPSVIP*DMVLSVHPFVTPTG
Trigger: TCCTGTTGGTGTTACAAATGGATGGACTGACAGCACCATATCTCAGGGGATCACTGATGGAGAAGTGGTAGATCTCAGCACATCAAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp GTTCGCGCTTTTCTCCTGGACCTAGAAGGCATATCCCACTCATCCTaGTCTTCGTCATCAGTTTGGACACTGGTATCAACGCTCTTTTTA +
Preference number: 5 (lower is better)
Translates to: VRAFLLDLEGISHSS*SSSSVWTLVSTLFL
Trigger: TAAAAAGAGCGTTGATACCAGTGTCCAAACTGATGACGAAGATCAGGATGAGTGGGATATGCCTTCTAGGTCCAGGAGAAAAGCGCGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp TCCACGCCTGGAGACTTTGCCTTATCCACAACTTTTGGTGGCTCATaGAGTTCCAGATGCTGTGGATTTTCCGAGTCTGACAACATATTG +
Preference number: 5 (lower is better)
Translates to: STPGDFALSTTFGGS*SSRCCGFSESDNIL
Trigger: CAATATGTTGTCAGACTCGGAAAATCCACAGCATCTGGAACTTCATGAGCCACCAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp AGGTGTTCTTATGGTTCCCAATGGCTCAGTTTGCACAGATATCTCTaGGACTGTTTGAACTGCTACACTGGAGACTTTGGAAGGGGGTTT +
Preference number: 5 (lower is better)
Translates to: RCSYGSQWLSLHRYL*DCLNCYTGDFGRGF
Trigger: AAACCCCCTTCCAAAGTCTCCAGTGTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGAACCATAAGAACACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp TCAGGACTTTCATCAAAAGTTTCGTCATCTTCATCATGCCAGGAATaGCGTCTCCCAGCATCATCGTCGAAGCTGGTACTACTCTTTCGA +
Preference number: 5 (lower is better)
Translates to: SGLSSKVSSSSSCQE*RLPASSSKLVLLFR
Trigger: TCGAAAGAGTAGTACCAGCTTCGACGATGATGCTGGGAGACGCCATTCCTGGCATGATGAAGATGACGAAACTTTTGATGAAAGTCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCCCTGTCCCTGCTGGTaGAGCTGGGGACTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSPCPCW*SWGLCW
Trigger: CCAGCAAAGTCCCCAGCTCAACCAGCAGGGACAGGG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGTTGAGGCTGGGGCTTaGCTGGAATGGGCTGCTGAG +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKVEAGA*LEWAAE
Trigger: CTCAGCAGCCCATTCCAGCAAAGCCCCAGCCTCAAC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGTACTGAGGCAGCCTTaGGGGTTGGCTGCGGTGAGG +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWVLRQP*GLAAVR
Trigger: CCTCACCGCAGCCAACCCCAAAGGCTGCCTCAGTAC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGTTGTGGGCTGTGATTaGGGGGCATCAGCGATACCC +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVVVGCD*GASAIP
Trigger: GGGTATCGCTGATGCCCCCAAATCACAGCCCACAAC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATTGGGTTTGGTGGTCTaGTCTGGCTTCTGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLGLVV*SGFWAR
Trigger: CCTCGCCCAGAAGCCAGACAAGACCACCAAACCCAA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGACAGAGATTGCAAACTaGATTCTTGCATTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWTEIAN*ILAFCA
Trigger: TGCACAGAATGCAAGAATCAAGTTTGCAATCTCTGT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCGCTCGAAGTTCATCTTaGTCTTTCTTCGATTTCTTA +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGARSSS*SFFDFL
Trigger: TAAGAAATCGAAGAAAGACAAAGATGAACTTCGAGC...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTCAGATTGCTCATCTGTaGGTGAGTATAAAGACACAG +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSQIAHL*VSIKTQ
Trigger: CTGTGTCTTTATACTCACCAACAGATGAGCAATCTG...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGGATCCATCTGTTACTaGCATCTGTTGCCGCTTCAT +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVGSICY*HLLPLH
Trigger: ATGAAGCGGCAACAGATGCAAGTAACAGATGGATCC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATCCCCAGTTTCTTTCTaGCCTTTTATCAACTCCTTT +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLSPVSF*PFINSF
Trigger: AAAGGAGTTGATAAAAGGCAAGAAAGAAACTGGGGA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATTAAAGGTAGACCTGTaGGTTTGGGGCACGTGTCTG +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPLKVDL*VWGTCL
Trigger: CAGACACGTGCCCCAAACCAACAGGTCTACCTTTAA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGCAGAGACTTCGGGTTTaGAAGCTTCTGCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVQRLRV*KLLLEE
Trigger: TTCTTCCAGCAGAAGCTTCAAAACCCGAAGTCTCTG...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGAGGCTCTGGAGGAATaGGTATGGAAACACTCCTGG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLEALEE*VWKHSW
Trigger: CCAGGAGTGTTTCCATACCAATTCCTCCAGAGCCTC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGAGGTGGAGTCATTCTaGCTGTGGAATACTGCGGGG +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSEVESF*LWNTAG
Trigger: CCCCGCAGTATTCCACAGCAAGAATGACTCCACCTC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGGTCTTGGTTGCCATTGGCTGGTGGAGGCAGATTATCAGACTGAGTTCTAGTTGCTGTTGTTGTTaGTCTTCATCAGGGACAATC +
Preference number: 5 (lower is better)
Translates to: ALVLVAIGWWRQIIRLSSSCCCC*SSSGTI
Trigger: GATTGTCCCTGATGAAGACAAACAACAACAGCAACT...AGAACTCAGTCTGATAATCTGCCTCCACCAGCCAATGGCAACCAAGACCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACTGCTGATGGAGCTGTaGTTGCAGCTGTTGGATCTG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLLMEL*LQLLDL
Trigger: CAGATCCAACAGCTGCAACAACAGCTCCATCAGCAG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCATCCCAATGGCTCAGTTaGCACAGATATCTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPSQWLS*HRYLCD
Trigger: GTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGA...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTCCCAATGGCTCAGTTaGCACAGATATCTCTGCGAC +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFSQWLS*HRYLCD
Trigger: GTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGCTTGGGGTCAGACATaGAACGCTGCATCATCTTGG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLAWGQT*NAASSW
Trigger: CCAAGATGATGCAGCGTTCAATGTCTGACCCCAAGC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAAACTTTCGTCTGCTGTaGGACTCAGAGGCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLNFRLL*DSEAWG
Trigger: ACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCATGTCCTGGAGAATTTaGGCTCGAGCCATGGTATTG +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSMSWRI*ARAMVL
Trigger: CAATACCATGGCTCGAGCCAAAATTCTCCAGGACAT...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CTGGTGGAGGCAGATTATCAGACTGAGTTCTTTGAATGGGGAGGACGCCTGCTATGGGGACCAGGTTTCTaGCTTGAAGAATATGTATTA +
Preference number: 5 (lower is better)
Translates to: LVEADYQTEFFEWGGRLLWGPGF*LEEYVL
Trigger: TAATACATATTCTTCAAGCAAGAAACCTGGTCCCCA...TAGCAGGCGTCCTCCCCATTCAAAGAACTCAGTCTGATAATCTGCCTCCACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CCTGTGCTGCTTCCTGGCATGATTACACTGACCGCTTTTATGTGCTGCTGTGGCTATTTAGTCCTTCTCTaGTACTCAACACTTGCATTC +
Preference number: 5 (lower is better)
Translates to: PVLLPGMITLTAFMCCCGYLVLL*YSTLAF
Trigger: GAATGCAAGTGTTGAGTACAAGAGAAGGACTAAATA...GCCACAGCAGCACATAAAAGCGGTCAGTGTAATCATGCCAGGAAGCAGCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGACACTGGTTTTGCTTaGACTGCGAGATGGTCCATG +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPDTGFA*TARWSM
Trigger: CATGGACCATCTCGCAGTCAAAGCAAAACCAGTGTC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGACACTGGTTTTGCTTaGACTGCGAGATGGTCCATG +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFDTGFA*TARWSM
Trigger: CATGGACCATCTCGCAGTCAAAGCAAAACCAGTGTC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp TCAGTCTGTTCTTTCAGCGGATACCACCGAGGAGTGTTGTCCAGATaGGATGTGCTAGATAAATCAATCAATACCTCTCCAAGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: SVCSFSGYHRGVLSR*DVLDKSINTSPRKS
Trigger: CGACTTCCTTGGAGAGGTATTGATTGATTTATCTAGCACATCTCATCTGGACAACACTCCTCGGTGGTATCCGCTGAAAGAACAGACTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp CGACGTAACCCTCCTCCTCCAGCAACAACTAGTTCCTCACTCTCCTaGCTTTTAGTTTCTCGGAATTTGAGTTCAGGACTTTCATCAAAA +
Preference number: 5 (lower is better)
Translates to: RRNPPPPATTSSSLS*LLVSRNLSSGLSSK
Trigger: TTTTGATGAAAGTCCTGAACTCAAATTCCGAGAAACTAAAAGCCAGGAGAGTGAGGAACTAGTTGTTGCTGGAGGAGGAGGGTTACGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGCTTCTGAGCAACTTTTaGTTTCTTTGTAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWLLSNF*FLCSFL
Trigger: GAGGAAACTACAAAGAAACAAAAAGTTGCTCAGAAG...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGAGGTGAAGGCTTTGTaGGACCAGGCTGCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLEVKAL*DQAAEL
Trigger: CAGCTCAGCAGCCTGGTCCAACAAAGCCTTCACCTC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTGCTGGAGTTGGGTGTaGAGGCTGGGGCTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTCWSWV*RLGLCW
Trigger: CCAGCAAAGCCCCAGCCTCAACACCCAACTCCAGCA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTATGGAAGTTCCTTCTTaGGGGAAGCCTGCTGTGACG +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSMEVPS*GKPAVT
Trigger: CGTCACAGCAGGCTTCCCCAAAGAAGGAACTTCCAT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAAGCCTGTGCCTGCACTaGAGAGCTCAGAATAGCAGG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVSLCLH*RAQNSR
Trigger: CCTGCTATTCTGAGCTCTCAAGTGCAGGCACAGGCT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGATGTGAAACAATTTTaGAGTCTGATGCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSDVKQF*SLMQAW
Trigger: CCAGGCCTGCATCAGACTCAAAAATTGTTTCACATC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATCTGTAGGTGGAGGTTaGCTGACCTTCCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLSVGGG*LTFPGG
Trigger: CCCACCTGGGAAGGTCAGCAAACCTCCACCTACAGA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGGAGAACGAGTCTTTTTaGAGTCCTTTTAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWENESF*SPFSKS
Trigger: AGATTTGCTAAAAGGACTCAAAAAAGACTCGTTCTC...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGGAAATCGTGTCAGCTaGTGGCCTCTCAGGTTTAGT +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLGNRVS*WPLRFS
Trigger: ACTAAACCTGAGAGGCCACAAGCTGACACGATTTCC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCACCAACTTGTAATGGCTaGGGCAGCAGAAGAATCTGT +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPPTCNG*GSRRIC
Trigger: ACAGATTCTTCTGCTGCCCAAGCCATTACAAGTTGG...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCAGATGTATATAGGGTaGGCTGTGAAGCACTTGGAA +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSQMYIG*AVKHLE
Trigger: TTCCAAGTGCTTCACAGCCAACCCTATATACATCTG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGTCAAGTTGCTGTTGTaGTTTGTCTTCATCAGGGAC +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVVKLLL*FVFIRD
Trigger: GTCCCTGATGAAGACAAACAACAACAGCAACTTGAC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp GCTTTGCCTGCAAACTTCACGGACACGGCTACCAAATACTATGAGCCAGGTTGGAACCATGATCTTTTCTaGTTCTCGGAACCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: ALPANFTDTATKYYEPGWNHDLF*FSEPLN
Trigger: ATTCAAAGGTTCCGAGAACAAGAAAAGATCATGGTT...CCAACCTGGCTCATAGTATTTGGTAGCCGTGTCCGTGAAGTTTGCAGGCAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATCTGAGGAGCTGTTCTaGGCCGCTCAATGCCGTGCT +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKSEELF*AAQCRA
Trigger: AGCACGGCATTGAGCGGCCAAGAACAGCTCCTCAGA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACATGGTGGCCACAGCTaGGAAGGTTGGTTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVHGGHS*EGWLSL
Trigger: CAGACTCAACCAACCTTCCAAGCTGTGGCCACCATG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGAGCAATCATCAGGGGTaGGTTGCGAATCACTTCATA +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVSNHQG*VANHFI
Trigger: TATGAAGTGATTCGCAACCAACCCCTGATGATTGCT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTATGGCTGCAGGCAATaGTTTGGCAGCTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVYGCRQ*FGSLFF
Trigger: GAAAAACAAGCTGCCAAACAATTGCCTGCAGCCATA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATGGTTGAATGCGGAGTaGCTGCACAGCGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKWLNAE*LHSGFS
Trigger: GCTGAAGCCGCTGTGCAGCAACTCCGCATTCAACCA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGGTAGGCTTTGTTGGTaGAATGCGGAGTTGCTGCAC +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSGRLCW*NAELLH
Trigger: GTGCAGCAACTCCGCATTCAACCAACAAAGCCTACC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS GCA 90 bp AATTTGAGTTCAGGACTTTCATCAAAAGTTTCGTCATCTTCATCATaGCAGGAATGGCGTCTCCCAGCATCATCGTCGAAGCTGGTACTA +
Preference number: 5 (lower is better)
Translates to: NLSSGLSSKVSSSSS*QEWRLPASSSKLVL
Trigger: TAGTACCAGCTTCGACGATGATGCTGGGAGACGCCATTCCTGGCATGATGAAGATGACGAAACTTTTGATGAAAGTCCTGAACTCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp CACGGTGCTTTGACACTCAGTACATGTGTTAAAATTGGCCTTTTCTaGAGTATGCAACAGAAGCTCAGTGGTGTTGCAAAGAGGACAGAT +
Preference number: 5 (lower is better)
Translates to: HGALTLSTCVKIGLF*SMQQKLSGVAKRTD
Trigger: ATCTGTCCTCTTTGCAACACCACTGAGCTTCTGTTGCATACTCCAGAAAAGGCCAATTTTAACACATGTACTGAGTGTCAAAGCACCGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp TCAGTGGTTCTAAGGAGACGATCTGTTTTGGACAGATCCTTTTCATaGAGACTAAATGCAGAGCTCAAAGCTGCTGTCCCTTTGGTAATG +
Preference number: 5 (lower is better)
Translates to: SVVLRRRSVLDRSFS*RLNAELKAAVPLVM
Trigger: CATTACCAAAGGGACAGCAGCTTTGAGCTCTGCATTTAGTCTCCATGAAAAGGATCTGTCCAAAACAGATCGTCTCCTTAGAACCACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGTTGGGCTACAGGTTTaGCTTGCTGAGCTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSVGLQV*LAELVF
Trigger: AAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAAC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTGTGGCAACAGGTTGTaGAGGCTGGGGCTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWCGNRL*RLGLCW
Trigger: CCAGCAAAGCCCCAGCCTCAACAACCTGTTGCCACA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGTTGAGGCTGAGGTTTaGTGGCAACAGGTTGTTGAG +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSVEAEV*WQQVVE
Trigger: CTCAACAACCTGTTGCCACAAAACCTCAGCCTCAAC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGTTGAGGCTGGGGCTTaGCTGGAGTTGGCTGTTGAG +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTVEAGA*LELAVE
Trigger: CTCAACAGCCAACTCCAGCAAAGCCCCAGCCTCAAC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTAGAAGTTGGTGGTGCTaGCAGAGGTCTTCCTGTTAC +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSRSWWC*QRSSCY
Trigger: GTAACAGGAAGACCTCTGCAAGCACCACCAACTTCT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTGGACTCCGGTGCTTaGGGGCTGTCCTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLDSGA*GLSCLD
Trigger: ATCCAAACAGGACAGCCCCAAAGCACCGGAGTCCAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTGGACTCCGGTGCTTaGGGGCTGTCCTGTTTGGAT +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLDSGA*GLSCLD
Trigger: ATCCAAACAGGACAGCCCCAAAGCACCGGAGTCCAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAGCCTGTGCCTGCACTaGAGAGCTCAGAATAGCAGG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLSLCLH*RAQNSR
Trigger: CCTGCTATTCTGAGCTCTCAAGTGCAGGCACAGGCT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGTGTTGGGGATCCTTTaGGTACTGGCTTTGTATCTG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLVLGIL*VLALYL
Trigger: CAGATACAAAGCCAGTACCAAAAGGATCCCCAACAC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTCTGTAGGTGGAGGTTaGCTGACCTTCCCAGGTGGG +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSVGGG*LTFPGG
Trigger: CCCACCTGGGAAGGTCAGCAAACCTCCACCTACAGA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTTGGGTTTGGTGGTCTaGTCTGGCTTCTGGGCGAGG +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWLGLVV*SGFWAR
Trigger: CCTCGCCCAGAAGCCAGACAAGACCACCAAACCCAA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGATGCAGGTGGCATTTaGTCCATATCTCCAAGTTGT +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFDAGGI*SISPSC
Trigger: ACAACTTGGAGATATGGACAAAATGCCACCTGCATC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAGGCTTCTTTTCCTTTTaGTCTGCAGGCAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLGFFSF*SAGRAF
Trigger: AAAAGCCCTGCCTGCAGACAAAAAGGAAAAGAAGCC...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTGTGTCACTCAGGCCTaGTGGGCTCTTGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSCVTQA*WALGLL
Trigger: CAGCAACCCAAGAGCCCACAAGGCCTGAGTGACACA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTGTGTCACTCAGGCCTaGTGGGCTCTTGGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWCVTQA*WALGLL
Trigger: CAGCAACCCAAGAGCCCACAAGGCCTGAGTGACACA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTGGACAGCACTAATTaGTCGCCTGTAAACCTCATT +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVLDSTN*SPVNLI
Trigger: AATGAGGTTTACAGGCGACAAATTAGTGCTGTCCAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGAAAATGGAGCCAGGTaGAGTGGTGATAGCAAATGT +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPENGAR*SGDSKC
Trigger: ACATTTGCTATCACCACTCAACCTGGCTCCATTTTC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTCCATAGTAATAGTTaGCAGGCTGGCATTGATGTC +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVFHSNS*QAGIDV
Trigger: GACATCAATGCCAGCCTGCAAACTATTACTATGGAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTGTCAAGTTGCTGTTGTaGTTTGTCTTCATCAGGGAC +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFVKLLL*FVFIRD
Trigger: GTCCCTGATGAAGACAAACAACAACAGCAACTTGAC...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTCGCTCCAAGTCAAGTaGCTGTTGTTGTTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFSLQVK*LLLFVF
Trigger: GAAGACAAACAACAACAGCAACTTGACTTGGAGCGA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGTTCCTCAGCAAAGCGTaGTTGCTTAATTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVFLSKA*LLNFLQ
Trigger: CTGGAGAAAATTAAGCAACAACGCTTTGCTGAGGAA...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTGTTCTCGGAACCTTaGAATCTCCTGACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLFSEP*NLLTFP
Trigger: TGGGAACGTCAGGAGATTCAAAGGTTCCGAGAACAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATATCTCTGCGACTGTTaGAACTGCTACACTGGAGAC +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLYLCDC*NCYTGD
Trigger: GTCTCCAGTGTAGCAGTTCAAACAGTCGCAGAGATA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGTGTTGGGCGTTTCTaGTCTTTGGGTGGAGATGTG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGVGRF*SLGGDV
Trigger: CACATCTCCACCCAAAGACAAGAAACGCCCAACACC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTCTGAGGAGCTGTTCTaGGCCGCTCAATGCCGTGCT +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWSEELF*AAQCRA
Trigger: AGCACGGCATTGAGCGGCCAAGAACAGCTCCTCAGA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAGCTTCTGTTTGTGTTaGTGGTGGTATGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFSFCLC*WWYELA
Trigger: AGCCAGTTCATACCACCACAAACACAAACAGAAGCT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCGTACAATGTCTGCTGTaGAAAATGAGACTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSVQCLL*KMRLLR
Trigger: ACGCAACAGTCTCATTTTCAACAGCAGACATTGTAC...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTCAAGTCTAAACTATaGTACTTACTCCCGAGATGG +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLKSKL*YLLPRW
Trigger: CCATCTCGGGAGTAAGTACAATAGTTTAGACTTGAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTCAGATATGCTTGATATaGGACTGCTTGCCATACTGC +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFQICLI*DCLPYC
Trigger: GCAGTATGGCAAGCAGTCCAATATCAAGCATATCTG...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCCCTGGCCATTCCCATaGGCTGGCCAACAGGACTTA +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTPWPFP*AGQQDL
Trigger: TAAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTCTGTTTCACAGGGTCTaGGCCATTCTGTCCCATCTT +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSLFHRV*AILSHL
Trigger: AAGATGGGACAGAATGGCCAAGACCCTGTGAAACAG...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS TCA 90 bp TCAATGGCATCTCCAATAAGTGGCAACTTTCCATTTTCCTTATACTaGTGCCTGTCTAGAGCAAGAGGCTCTGGAGGAATTGGTATGGAA +
Preference number: 5 (lower is better)
Translates to: SMASPISGNFPFSLY*CLSRARGSGGIGME
Trigger: TTCCATACCAATTCCTCCAGAGCCTCTTGCTCTAGACAGGCATCAGTATAAGGAAAATGGAAAGTTGCCACTTATTGGAGATGCCATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp AGTATGGTGGTCAATGTCTGCATAGAAGGAGTCTGCAGATATGCTTaGTATTGGACTGCTTGCCATACTGCTTCTTTCCTCCAAACCTAT +
Preference number: 5 (lower is better)
Translates to: SMVVNVCIEGVCRYA*YWTACHTASFLQTY
Trigger: ATAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATGCAGACATTGACCACCATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp TGCTTAATTTTCTCCAGTTCCAGGAGCTCTCGCTCCAAGTCAAGTTaGTGTTGTTGTTTGTCTTCATCAGGGACAATCAAAAGAGTGCTT +
Preference number: 5 (lower is better)
Translates to: CLIFSSSRSSRSKSS*CCCLSSSGTIKRVL
Trigger: AAGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCTGGAACTGGAGAAAATTAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp TTGAAGTATGGTGGTCAATGTCTGCATAGAAGGAGTCTGCAGATATaGTTGATATTGGACTGCTTGCCATACTGCTTCTTTCCTCCAAAC +
Preference number: 5 (lower is better)
Translates to: LKYGGQCLHRRSLQI*LILDCLPYCFFPPN
Trigger: GTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATGCAGACATTGACCACCATACTTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTTTGTGGCAACAGGTaGTTGAGGCTGGGGCTTTGC +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQFCGNR*LRLGLC
Trigger: GCAAAGCCCCAGCCTCAACAACCTGTTGCCACAAAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGTACATGTGTTAAAATaGGCCTTTTCTGGAGTATGC +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVVHVLK*AFSGVC
Trigger: GCATACTCCAGAAAAGGCCAATTTTAACACATGTAC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGGTTTAGGGGTCACCTaGGTTTGTGCTTTCTTAGGC +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVGLGVT*VCAFLG
Trigger: GCCTAAGAAAGCACAAACCAAGGTGACCCCTAAACC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACAAGTTGTCCTGATATaGCTCTCTGTGTCTGACAGT +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLQVVLI*LSVSDS
Trigger: ACTGTCAGACACAGAGAGCAATATCAGGACAACTTG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACACCTACAAGTGTGCTaGCCTGAGCTTCCAAAATGG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVHLQVC*PELPKW
Trigger: CCATTTTGGAAGCTCAGGCAAGCACACTTGTAGGTG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCCATCTACTGATCCATaGTATGTGTCCTCTACTAAA +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSPSTDP*YVSSTK
Trigger: TTTAGTAGAGGACACATACAATGGATCAGTAGATGG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGGTTTATGATAGAAGGTaGGACAGCACTAATTTGTCG +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVVYDRR*DSTNLS
Trigger: CGACAAATTAGTGCTGTCCAACCTTCTATCATAAAC...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTTCCTCAGCAAAGCGTaGTTGCTTAATTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFFLSKA*LLNFLQ
Trigger: CTGGAGAAAATTAAGCAACAACGCTTTGCTGAGGAA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTCTTCTTCTCCTACTaGCATAAGTCCGATCAGCAG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLFFFSY*HKSDQQ
Trigger: CTGCTGATCGGACTTATGCAAGTAGGAGAAGAAGAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGCTACACTGGAGACTTaGGAAGGGGGTTTGGTCTTG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLATLET*EGGLVL
Trigger: CAAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAGC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACAATCTCTAAAGGTGTaGGGCGTTTCTTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLQSLKV*GVSCLW
Trigger: CCAAAGACAAGAAACGCCCAACACCTTTAGAGATTG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGGACTTTTGGAGATTaGGGTGGGGAAGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRTFGD*GGEGAS
Trigger: GCTGGCTCCTTCCCCACCCAAATCTCCAAAAGTCCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGTTGGACTCAGAGGCTaGGGGTCAGACATTGAACGC +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSVGLRG*GSDIER
Trigger: GCGTTCAATGTCTGACCCCAAGCCTCTGAGTCCAAC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACCTCAGGAGGGGGATTaGGCAGTGTTCTCTTCACTT +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLPQEGD*AVFSSL
Trigger: AAGTGAAGAGAACACTGCCAAATCCCCCTCCTGAGG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGCTCGAGCCATGGTATaGGTTCTGCACATTCTTCTC +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVARAMV*VLHILL
Trigger: GAGAAGAATGTGCAGAACCAATACCATGGCTCGAGC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATCCAGATACCGTAGCTaGGCATCAATCTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLSRYRS*ASISFS
Trigger: AGAAAAGGAGATTGATGCCAAGCTACGGTATCTGGA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCATGGTGGCCACAGCTaGGAAGGTTGGTTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWHGGHS*EGWLSL
Trigger: CAGACTCAACCAACCTTCCAAGCTGTGGCCACCATG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGGTTTGCCGAGGCTTTaGTTGTATCACCATCATCTG +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSGLPRL*LYHHHL
Trigger: CAGATGATGGTGATACAACAAAAGCCTCGGCAAACC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACAGATATGCTTGATATaGGACTGCTTGCCATACTGC +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLQICLI*DCLPYC
Trigger: GCAGTATGGCAAGCAGTCCAATATCAAGCATATCTG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGAAGTCTGTCACTTCTaGAGACCTCCGTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVEVCHF*RPPCLS
Trigger: ACTGAGACACGGAGGTCTCAAGAAGTGACAGACTTC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGTCAGACATAGCATGTaGGAAGTCATCCATGATGAA +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPVRHSM*EVIHDE
Trigger: TTCATCATGGATGACTTCCAACATGCTATGTCTGAC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGATTCATCTGCAGAATTaGCTCTTGATGTTGACTGAG +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVIHLQN*LLMLTE
Trigger: CTCAGTCAACATCAAGAGCAAATTCTGCAGATGAAT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGAAAGATGTAGTGCATaGTCTTCCCATTCATCTGCA +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPERCSA*SSHSSA
Trigger: TGCAGATGAATGGGAAGACAATGCACTACATCTTTC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTCTGCTTCCCCACTTaGCTGATTAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLFCFPT*LINDAL
Trigger: CAGAGCATCATTAATCAGCAAAGTGGGGAAGCAGAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACCACGCCTGGAGACTTaGCCTTATCCACAACTTTTG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVPRLET*PYPQLL
Trigger: CAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTGGGGACCAGGTTTCTaGCTTGAAGAATATGTATTA +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSWGPGF*LEEYVL
Trigger: TAATACATATTCTTCAAGCAAGAAACCTGGTCCCCA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS TCA 90 bp AACTTCTATTATTTTCTCGGGGCTTATCTCAAATCCTTCTGGGTCTaGTTCTATGCTAGGCGAGTATTCAGAACAAGAGGACCTATGGAG +
Preference number: 5 (lower is better)
Translates to: NFYYFLGAYLKSFWV*FYARRVFRTRGPME
Trigger: CTCCATAGGTCCTCTTGTTCTGAATACTCGCCTAGCATAGAATCAGACCCAGAAGGATTTGAGATAAGCCCCGAGAAAATAATAGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp TGCATCATTTCTTCATACATCTCCTCAGCGCTTTTTAAAGCCTTCTaGGCACCTTCTTTCTGCATAACAGATTGCTCATCTGTTGGTGAG +
Preference number: 5 (lower is better)
Translates to: CIISSYISSALFKAF*APSFCITDCSSVGE
Trigger: CTCACCAACAGATGAGCAATCTGTTATGCAGAAAGAAGGTGCTCAGAAGGCTTTAAAAAGCGCTGAGGAGATGTATGAAGAAATGATGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 90 bp GAAGATGAAGAATGGCCAAAAGAGACATCCAGAGCTTCAGCCTCTTaGGCTTTCAATCTTAGTGATGAGCTGGAAGAATCCCTCTTAATT +
Preference number: 5 (lower is better)
Translates to: EDEEWPKETSRASAS*AFNLSDELEESLLI
Trigger: AATTAAGAGGGATTCTTCCAGCTCATCACTAAGATTGAAAGCTCAAGAGGCTGAAGCTCTGGATGTCTCTTTTGGCCATTCTTCATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 90 bp GATTCCATTCCATTCCAAAACTTGCATCCCTTCTATAAGTTTCCCTaGGTGTTCTGCACTTCCACCAGGAAGAATCTTAGCAATATAGGC +
Preference number: 5 (lower is better)
Translates to: DSIPFQNLHPFYKFP*VFCTSTRKNLSNIG
Trigger: GCCTATATTGCTAAGATTCTTCCTGGTGGAAGTGCAGAACACTCAGGGAAACTTATAGAAGGGATGCAAGTTTTGGAATGGAATGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp ACAGAGTCCATTGTCTCAGCAGGAAGAGTTTCCATAGTAATAGTTTaGAGGCTGGCATTGATGTCAATACTGGTTACTGAGATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: TESIVSAGRVSIVIV*RLALMSILVTEMSV
Trigger: AACAGACATCTCAGTAACCAGTATTGACATCAATGCCAGCCTGCAAACTATTACTATGGAAACTCTTCCTGCTGAGACAATGGACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp TTGGACACTGGTATCAACGCTCTTTTTAGTTCTTCTTCTCCTACTTaGATAAGTCCGATCAGCAGTTTCTTCATCGTCAGTTTGTACACC +
Preference number: 5 (lower is better)
Translates to: LDTGINALFSSSSPT*ISPISSFFIVSLYT
Trigger: GGTGTACAAACTGACGATGAAGAAACTGCTGATCGGACTTATGCAAGTAGGAGAAGAAGAACTAAAAAGAGCGTTGATACCAGTGTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp CAATGTCTGCATAGAAGGAGTCTGCAGATATGCTTGATATTGGACTaGTTGCCATACTGCTTCTTTCCTCCAAACCTATTCTCAAGTCTA +
Preference number: 5 (lower is better)
Translates to: QCLHRRSLQICLILD*LPYCFFPPNLFSSL
Trigger: TAGACTTGAGAATAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATGCAGACATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAACTACTATCCAACTCTaGTTTCCTGTGCATGGAGGG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVTTIQL*FPVHGG
Trigger: CCCTCCATGCACAGGAAACAAGAGTTGGATAGTAGT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATTGGGGCTGTCCTGTTaGGATGGAAGTTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLGLSC*DGSSFF
Trigger: AAAGAAGGAACTTCCATCCAAACAGGACAGCCCCAA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAGGGGTCACCTTGGTTaGTGCTTTCTTAGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSRGHLG*CFLRLL
Trigger: GAGGAGCCTAAGAAAGCACAAACCAAGGTGACCCCT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TATGAGCAATCCAGTGTCTCTGGCCTATTTCCATCGGTTTGCCTTCAACATGTGACAGAAACTAGGCTTTaGGTTACTTCACTTTCTTCT +
Preference number: 5 (lower is better)
Translates to: YEQSSVSGLFPSVCLQHVTETRL*VTSLSS
Trigger: AGAAGAAAGTGAAGTAACCAAAAGCCTAGTTTCTGT...CACATGTTGAAGGCAAACCGATGGAAATAGGCCAGAGACACTGGATTGCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCTTAGTTTCTCGGAATTaGAGTTCAGGACTTTCATCA +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLVSRN*SSGLSS
Trigger: TGATGAAAGTCCTGAACTCAAATTCCGAGAAACTAA...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACAGATTGCTCATCTGTaGGTGAGTATAAAGACACAG +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLQIAHL*VSIKTQ
Trigger: CTGTGTCTTTATACTCACCAACAGATGAGCAATCTG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTCCATTTTGTTCATCTaGCCTGGTGAGCAGGCTGCC +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSILFI*PGEQAA
Trigger: GGCAGCCTGCTCACCAGGCAAGATGAACAAAATGGA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATGTCAAAGATGCGTCTaGTACCCTGTCAAAGTCCAG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVCQRCV*YPVKVQ
Trigger: CTGGACTTTGACAGGGTACAAGACGCATCTTTGACA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTAAAGGTAGACCTGTaGGTTTGGGGCACGTGTCTG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLKVDL*VWGTCL
Trigger: CAGACACGTGCCCCAAACCAACAGGTCTACCTTTAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp ACCAGAGCCTACTGTGAAAAGCAAATGGCAGAGCCTTTTGATATCAGAGGATCCCTTCTGATTTTGGTATaGTACGCAAATCAATGGCAT +
Preference number: 5 (lower is better)
Translates to: TRAYCEKQMAEPFDIRGSLLILV*YANQWH
Trigger: ATGCCATTGATTTGCGTACAATACCAAAATCAGAAG...GGATCCTCTGATATCAAAAGGCTCTGCCATTTGCTTTTCACAGTAGGCTCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTCTTCATCGTCAGTTaGTACACCACTGTCCACTAT +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLFFIVS*YTTVHY
Trigger: ATAGTGGACAGTGGTGTACAAACTGACGATGAAGAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTTTAATTATTTCTACCTaGGCATCCACCCGTGCTCGT +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSLIIST*ASTRAR
Trigger: ACGAGCACGGGTGGATGCCAAGGTAGAAATAATTAA...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATTCATCAAGTTCTGCTaGCTTCTTTCTAAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLFIKFC*LLSKLG
Trigger: GCCAAGCTTAGAAAGAAGCAAGCAGAACTTGATGAA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACCACAGCTTGGAAGGTaGGTTGAGTCTGATAAGGTG +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKPQLGR*VESDKV
Trigger: CACCTTATCAGACTCAACCAACCTTCCAAGCTGTGG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTAAAGCTGCTGTCCCTTaGGTAATGTCTCCAATGTCA +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSKAAVP*VMSPMS
Trigger: TGACATTGGAGACATTACCAAAGGGACAGCAGCTTT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGAAGTCTGTCACTTCTaGAGACCTCCGTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKEVCHF*RPPCLS
Trigger: ACTGAGACACGGAGGTCTCAAGAAGTGACAGACTTC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGCTGCAGGCAATTGTTaGGCAGCTTGTTTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLAAGNC*AACFSR
Trigger: CCTGGAAAAACAAGCTGCCAAACAATTGCCTGCAGC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACCACGCCTGGAGACTTaGCCTTATCCACAACTTTTG +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKPRLET*PYPQLL
Trigger: CAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTTGGGGACCAGGTTTCTaGCTTGAAGAATATGTATTA +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFWGPGF*LEEYVL
Trigger: TAATACATATTCTTCAAGCAAGAAACCTGGTCCCCA...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 90 bp AGCTTGTGGCCTCTCAGGTTTAGTTGCTACAGATTCTGTGATAGATaGTGCTATACCAGGAAAAGAAATCATAATCTGATCAGCGTTAGT +
Preference number: 5 (lower is better)
Translates to: SLWPLRFSCYRFCDR*CYTRKRNHNLISVS
Trigger: ACTAACGCTGATCAGATTATGATTTCTTTTCCTGGTATAGCACCATCTATCACAGAATCTGTAGCAACTAAACCTGAGAGGCCACAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTCCTTCCCTGGTCCTaGCTGTTTAGGGATCAACTT +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQFLPWS*LFRDQL
Trigger: AAGTTGATCCCTAAACAGCAAGGACCAGGGAAGGAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGGAGCTTGCACAGGTTaGGCCTCTAAGTTTTCAGCT +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSGACTG*ASKFSA
Trigger: AGCTGAAAACTTAGAGGCCAAACCTGTGCAAGCTCC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAACAGAGATTGCAAACTaGATTCTTGCATTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLTEIAN*ILAFCA
Trigger: TGCACAGAATGCAAGAATCAAGTTTGCAATCTCTGT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGATGCAGGTGGCATTTaGTCCATATCTCCAAGTTGT +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVDAGGI*SISPSC
Trigger: ACAACTTGGAGATATGGACAAAATGCCACCTGCATC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGCGGGGTTTTCTCAATaGATGGTGTTTCTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVAGFSQ*MVFLSL
Trigger: CAGAGAAAGAAACACCATCAATTGAGAAAACCCCGC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGTTATAGGCTTCTCCAAGCATTTGTCTGCTGGAAACATCCATGGAAAGCACCAGAGAACGAGTCTTTTTaGAGTCCTTTTAGCAAATCT +
Preference number: 5 (lower is better)
Translates to: SYRLLQAFVCWKHPWKAPENESF*SPFSKS
Trigger: AGATTTGCTAAAAGGACTCAAAAAAGACTCGTTCTC...TGGTGCTTTCCATGGATGTTTCCAGCAGACAAATGCTTGGAGAAGCCTATAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGGATCCATCTGTTACTaGCATCTGTTGCCGCTTCAT +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKGSICY*HLLPLH
Trigger: ATGAAGCGGCAACAGATGCAAGTAACAGATGGATCC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTATCCCCAGTTTCTTTCTaGCCTTTTATCAACTCCTTT +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLSPVSF*PFINSF
Trigger: AAAGGAGTTGATAAAAGGCAAGAAAGAAACTGGGGA...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACAGAGACTTCGGGTTTaGAAGCTTCTGCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKQRLRV*KLLLEE
Trigger: TTCTTCCAGCAGAAGCTTCAAAACCCGAAGTCTCTG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAGCCTTTTCACATCCATaGCAGAAGCAGAAAGATCCA +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVAFSHP*QKQKDP
Trigger: TGGATCTTTCTGCTTCTGCAATGGATGTGAAAAGGC...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATGGAGGGGATTGGAGTaGCTACTGAAGAATAGACAA +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVWRGLE*LLKNRQ
Trigger: TTGTCTATTCTTCAGTAGCAACTCCAATCCCCTCCA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTAGTTGCTGTTGTTGTTaGTCTTCATCAGGGACAATC +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSSCCCC*SSSGTI
Trigger: GATTGTCCCTGATGAAGACAAACAACAACAGCAACT...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTGTTCTCGGAACCTTaGAATCTCCTGACGTTCCCA +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKLFSEP*NLLTFP
Trigger: TGGGAACGTCAGGAGATTCAAAGGTTCCGAGAACAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TACTATGAGCCAGGTTGGATGGATGGTGGAAACAAAGGAGAAACAGCCAGTTTTAACCATGATCTTTTCTaGTTCTCGGAACCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: YYEPGWMDGGNKGETASFNHDLF*FSEPLN
Trigger: ATTCAAAGGTTCCGAGAACAAGAAAAGATCATGGTT...AAAACTGGCTGTTTCTCCTTTGTTTCCACCATCCATCCAACCTGGCTCATAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAATGTCCTGGAGAATTTaGGCTCGAGCCATGGTATTG +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKMSWRI*ARAMVL
Trigger: CAATACCATGGCTCGAGCCAAAATTCTCCAGGACAT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAATTGTGTGTAAGGACTaGTCGGAGGAACTAGCTGAG +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKIVCKD*SEELAE
Trigger: CTCAGCTAGTTCCTCCGACAAGTCCTTACACACAAT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCCACAGCTTGGAAGGTaGGTTGAGTCTGATAAGGTG +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSPQLGR*VESDKV
Trigger: CACCTTATCAGACTCAACCAACCTTCCAAGCTGTGG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTAAGGAGACGATCTGTTTaGGACAGATCCTTTTCATGG +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVRRRSV*DRSFSW
Trigger: CCATGAAAAGGATCTGTCCAAAACAGATCGTCTCCT...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGAAGTCTGTCACTTCTaGAGACCTCCGTGTCTCAGT +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTEVCHF*RPPCLS
Trigger: ACTGAGACACGGAGGTCTCAAGAAGTGACAGACTTC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGCTGCAGGCAATTGTTaGGCAGCTTGTTTTTCCAGG +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTAAGNC*AACFSR
Trigger: CCTGGAAAAACAAGCTGCCAAACAATTGCCTGCAGC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAAAATGTGATATCATCTaGAAGAAGCCTTGCCCTAGA +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLKCDII*KKPCPR
Trigger: TCTAGGGCAAGGCTTCTTCAAGATGATATCACATTT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGACACTGGTTTTGCTTaGACTGCGAGATGGTCCATG +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWDTGFA*TARWSM
Trigger: CATGGACCATCTCGCAGTCAAAGCAAAACCAGTGTC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGGATCTCTCCCATTACTaGAGTTTTAGCCTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQDLSHY*SFSLRV
Trigger: GACACGGAGGCTAAAACTCAAGTAATGGGAGAGATC...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTAAATCTAAAGGTTTCATaGAAGGAAGGCTCTCGATCA +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLNLKVS*KEGSRS
Trigger: TGATCGAGAGCCTTCCTTCAATGAAACCTTTAGATT...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS GCA 90 bp TTGTGGCCTCTCAGGTTTAGTTGCTACAGATTCTGTGATAGATGGTaGTATACCAGGAAAAGAAATCATAATCTGATCAGCGTTAGTTCT +
Preference number: 5 (lower is better)
Translates to: LWPLRFSCYRFCDRW*YTRKRNHNLISVSS
Trigger: AGAACTAACGCTGATCAGATTATGATTTCTTTTCCTGGTATAGCACCATCTATCACAGAATCTGTAGCAACTAAACCTGAGAGGCCACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 90 bp AGAAGGAGTCTGCAGATATGCTTGATATTGGACTGCTTGCCATACTaGTTCTTTCCTCCAAACCTATTCTCAAGTCTAAACTATTGTACT +
Preference number: 5 (lower is better)
Translates to: RRSLQICLILDCLPY*FFPPNLFSSLNYCT
Trigger: AGTACAATAGTTTAGACTTGAGAATAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 90 bp AAATGGGTCCGAGTAGCCATTGTTGTCTCTGGGGACCAGGTTTCTTaGTTGAAGAATATGTATTATAAGATTTCCAAGATCGTAGTTGAT +
Preference number: 5 (lower is better)
Translates to: KWVRVAIVVSGDQVS*LKNMYYKISKIVVD
Trigger: ATCAACTACGATCTTGGAAATCTTATAATACATATTCTTCAAGCAAGAAACCTGGTCCCCAGAGACAACAATGGCTACTCGGACCCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGTTCATCATTCTGGTTTAATTTCCCCCACAAACACAGTCACCTTCTGGTCCTACTTCTGAGCAACTTTTaGTTTCTTTGTAGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: CSSFWFNFPHKHSHLLVLLLSNF*FLCSFL
Trigger: GAGGAAACTACAAAGAAACAAAAAGTTGCTCAGAAG...TAGGACCAGAAGGTGACTGTGTTTGTGGGGGAAATTAAACCAGAATGATGAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGATGTGAAACAATTTTaGAGTCTGATGCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLDVKQF*SLMQAW
Trigger: CCAGGCCTGCATCAGACTCAAAAATTGTTTCACATC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGGCTTCTTTTCCTTTTaGTCTGCAGGCAGGGCTTTT +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWGFFSF*SAGRAF
Trigger: AAAAGCCCTGCCTGCAGACAAAAAGGAAAAGAAGCC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTACTCCAGAAAGGATACTaGATGTCAAAGATGCGTCTT +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVLQKGY*MSKMRL
Trigger: AAGACGCATCTTTGACATCAAGTATCCTTTCTGGAG...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTCTTCTTCTCCTACTaGCATAAGTCCGATCAGCAG +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKFFFSY*HKSDQQ
Trigger: CTGCTGATCGGACTTATGCAAGTAGGAGAAGAAGAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTATCTCTGCGACTGTTaGAACTGCTACACTGGAGAC +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTYLCDC*NCYTGD
Trigger: GTCTCCAGTGTAGCAGTTCAAACAGTCGCAGAGATA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAGCTTCTGTTTGTGTTaGTGGTGGTATGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQSFCLC*WWYELA
Trigger: AGCCAGTTCATACCACCACAAACACAAACAGAAGCT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAAGCTTCTGTTTGTGTTaGTGGTGGTATGAACTGGCT +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLSFCLC*WWYELA
Trigger: AGCCAGTTCATACCACCACAAACACAAACAGAAGCT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCATTGTGTGTAAGGACTaGTCGGAGGAACTAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSIVCKD*SEELAE
Trigger: CTCAGCTAGTTCCTCCGACAAGTCCTTACACACAAT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAAGGAGACGATCTGTTTaGGACAGATCCTTTTCATGG +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKRRRSV*DRSFSW
Trigger: CCATGAAAAGGATCTGTCCAAAACAGATCGTCTCCT...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGATCCAAATTGATCCCTaGTATCTGCAGATATGGGCG +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQIQIDP*YLQIWA
Trigger: CGCCCATATCTGCAGATACAAGGGATCAATTTGGAT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTCTGCTTCCCCACTTaGCTGATTAATGATGCTCTG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLFCFPT*LINDAL
Trigger: CAGAGCATCATTAATCAGCAAAGTGGGGAAGCAGAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCCTTATCCACAACTTTaGGTGGCTCATGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQPYPQL*VAHEVP
Trigger: TGGAACTTCATGAGCCACCAAAAGTTGTGGATAAGG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS GCA 90 bp CTAGGTTTTCTGTATTGTAACTCAGTATGTTTTGATGTAGTAAGCTaGAGTGGTGATGTTACTGCATGTTCTATACCCACTTGGCTTTCT +
Preference number: 5 (lower is better)
Translates to: LGFLYCNSVCFDVVS*SGDVTACSIPTWLS
Trigger: AGAAAGCCAAGTGGGTATAGAACATGCAGTAACATCACCACTGCAGCTTACTACATCAAAACATACTGAGTTACAATACAGAAAACCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 90 bp TCCAAACCTATTCTCAAGTCTAAACTATTGTACTTACTCCCGAGATaGGAAACAGCATACGTATTATCAGTAGAAACTGGAGCAATCATC +
Preference number: 5 (lower is better)
Translates to: SKPILKSKLLYLLPR*ETAYVLSVETGAII
Trigger: GATGATTGCTCCAGTTTCTACTGATAATACGTATGCTGTTTCCCATCTCGGGAGTAAGTACAATAGTTTAGACTTGAGAATAGGTTTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TGCTTCTTGGTTTTGACCTCATTTGCTTCTGAAAGCATAGATCACCACAGTAGTGCTCGAAGTTCATCTTaGTCTTTCTTCGATTTCTTA +
Preference number: 5 (lower is better)
Translates to: CFLVLTSFASESIDHHSSARSSS*SFFDFL
Trigger: TAAGAAATCGAAGAAAGACAAAGATGAACTTCGAGC...ACTACTGTGGTGATCTATGCTTTCAGAAGCAAATGAGGTCAAAACCAAGAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTGGAGGGGATTGGAGTaGCTACTGAAGAATAGACAA +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWWRGLE*LLKNRQ
Trigger: TTGTCTATTCTTCAGTAGCAACTCCAATCCCCTCCA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCAAATGTGGAGGGGATaGGAGTTGCTACTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSQMWRG*ELLLKN
Trigger: ATTCTTCAGTAGCAACTCCAATCCCCTCCACATTTG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCAAATGTGGAGGGGATaGGAGTTGCTACTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWQMWRG*ELLLKN
Trigger: ATTCTTCAGTAGCAACTCCAATCCCCTCCACATTTG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGAAAATGGAGCCAGGTaGAGTGGTGATAGCAAATGT +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTENGAR*SGDSKC
Trigger: ACATTTGCTATCACCACTCAACCTGGCTCCATTTTC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCTCGCTCCAAGTCAAGTaGCTGTTGTTGTTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSSLQVK*LLLFVF
Trigger: GAAGACAAACAACAACAGCAACTTGACTTGGAGCGA...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTCGCTCCAAGTCAAGTaGCTGTTGTTGTTTGTCTTC +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTSLQVK*LLLFVF
Trigger: GAAGACAAACAACAACAGCAACTTGACTTGGAGCGA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGCTCAGCAAAGCGTTGTaGCTTAATTTTCTCCAGTTC +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLSKAL*LNFLQF
Trigger: GAACTGGAGAAAATTAAGCAACAACGCTTTGCTGAG...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCAACCGTGTACCATCCTaGGCTCTGTGGTATTTCAAT +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSNRVPS*ALWYFN
Trigger: ATTGAAATACCACAGAGCCAAGGATGGTACACGGTT...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAACCGTGTACCATCCTaGGCTCTGTGGTATTTCAAT +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWNRVPS*ALWYFN
Trigger: ATTGAAATACCACAGAGCCAAGGATGGTACACGGTT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCAATCTCTAAAGGTGTaGGGCGTTTCTTGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTQSLKV*GVSCLW
Trigger: CCAAAGACAAGAAACGCCCAACACCTTTAGAGATTG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTCATCAAGTTCTGCTaGCTTCTTTCTAAGCTTGGC +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLFIKFC*LLSKLG
Trigger: GCCAAGCTTAGAAAGAAGCAAGCAGAACTTGATGAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTCCAGATACCGTAGCTaGGCATCAATCTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTSRYRS*ASISFS
Trigger: AGAAAAGGAGATTGATGCCAAGCTACGGTATCTGGA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGTCCAGATACCGTAGCTaGGCATCAATCTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWSRYRS*ASISFS
Trigger: AGAAAAGGAGATTGATGCCAAGCTACGGTATCTGGA...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAAGTACAATGTCTGCTGTaGAAAATGAGACTGTTGCGT +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKVQCLL*KMRLLR
Trigger: ACGCAACAGTCTCATTTTCAACAGCAGACATTGTAC...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGAGCAATCATCAGGGGTaGGTTGCGAATCACTTCATA +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWSNHQG*VANHFI
Trigger: TATGAAGTGATTCGCAACCAACCCCTGATGATTGCT...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACTCAAGTCTAAACTATaGTACTTACTCCCGAGATGG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLKSKL*YLLPRW
Trigger: CCATCTCGGGAGTAAGTACAATAGTTTAGACTTGAG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTGATATTGGACTGCTaGCCATACTGCTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLILDC*PYCFFP
Trigger: AGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTGATATTGGACTGCTaGCCATACTGCTTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKLILDC*PYCFFP
Trigger: AGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCGCCCCTACGGAATTCTaGCTTAATCTGATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSAPTEF*LNLMFQ
Trigger: CTGAAACATCAGATTAAGCAAGAATTCCGTAGGGGC...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGGCCCCTACGGAATTCTaGCTTAATCTGATGTTTCAG +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTAPTEF*LNLMFQ
Trigger: CTGAAACATCAGATTAAGCAAGAATTCCGTAGGGGC...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTATGGCTGCAGGCAATaGTTTGGCAGCTTGTTTTTC +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTYGCRQ*FGSLFF
Trigger: GAAAAACAAGCTGCCAAACAATTGCCTGCAGCCATA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGATCCAAATTGATCCCTaGTATCTGCAGATATGGGCG +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTIQIDP*YLQIWA
Trigger: CGCCCATATCTGCAGATACAAGGGATCAATTTGGAT...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGCCTTATCCACAACTTTaGGTGGCTCATGAAGTTCCA +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTPYPQL*VAHEVP
Trigger: TGGAACTTCATGAGCCACCAAAAGTTGTGGATAAGG...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTTCTCAGATCCACTTaGTCAAGCCAGATACAAGCT +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQFLRST*SSQIQA
Trigger: AGCTTGTATCTGGCTTGACAAAGTGGATCTGAGAAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCTTCGTCTCGTTCATTaGCAGCTGGAAAAGCTTTAT +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLRLVH*QLEKLY
Trigger: ATAAAGCTTTTCCAGCTGCAAATGAACGAGACGAAG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAACCATCTACTGATCCATaGTATGTGTCCTCTACTAAA +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKPSTDP*YVSSTK
Trigger: TTTAGTAGAGGACACATACAATGGATCAGTAGATGG...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAGTTTATGATAGAAGGTaGGACAGCACTAATTTGTCG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLVYDRR*DSTNLS
Trigger: CGACAAATTAGTGCTGTCCAACCTTCTATCATAAAC...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTTCCTCAGCAAAGCGTaGTTGCTTAATTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTFLSKA*LLNFLQ
Trigger: CTGGAGAAAATTAAGCAACAACGCTTTGCTGAGGAA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTTCTTCATCGTCAGTTaGTACACCACTGTCCACTAT +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTFFIVS*YTTVHY
Trigger: ATAGTGGACAGTGGTGTACAAACTGACGATGAAGAA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGGTCAGACATAGCATGTaGGAAGTCATCCATGATGAA +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWVRHSM*EVIHDE
Trigger: TTCATCATGGATGACTTCCAACATGCTATGTCTGAC...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTAATTCATCTGCAGAATTaGCTCTTGATGTTGACTGAG +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLIHLQN*LLMLTE
Trigger: CTCAGTCAACATCAAGAGCAAATTCTGCAGATGAAT...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AATTACAGCAAAACTGATGTGCTTTGCCACGTAGAATTCAGACCTACTGTTGTATATTTAGTCCTTCTCTaGTACTCAACACTTGCATTC +
Preference number: 5 (lower is better)
Translates to: NYSKTDVLCHVEFRPTVVYLVLL*YSTLAF
Trigger: GAATGCAAGTGTTGAGTACAAGAGAAGGACTAAATA...TACAACAGTAGGTCTGAATTCTACGTGGCAAAGCACATCAGTTTTGCTGTAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTACTTCAGATGATGATTTaGAACTACCAGGACTACTGT +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLQMMI*NYQDYC
Trigger: ACAGTAGTCCTGGTAGTTCAAAATCATCATCTGAAG...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGAACCATGATCTTTTCTaGTTCTCGGAACCTTTGAAT +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQNHDLF*FSEPLN
Trigger: ATTCAAAGGTTCCGAGAACAAGAAAAGATCATGGTT...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CATTTGCAAGTTAATATGTGCAAAGTAAGGAGTAAAATCAGGGCTAGAAACCAGTTAGGACATAATTCCTaGAAGTATGGTGGTCAATGT +
Preference number: 5 (lower is better)
Translates to: HLQVNMCKVRSKIRARNQLGHNS*KYGGQC
Trigger: ACATTGACCACCATACTTCAAGGAATTATGTCCTAA...CTGGTTTCTAGCCCTGATTTTACTCCTTACTTTGCACATATTAACTTGCAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATTAGGACATAATTCCTaGAAGTATGGTGGTCAATGT +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLLGHNS*KYGGQC
Trigger: ACATTGACCACCATACTTCAAGGAATTATGTCCTAA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TTACACGGTGATGATGAAATCCTAAAATGCCATGCCCACAAAAGCACATTAAAATTAGGACATAATTCCTaGAAGTATGGTGGTCAATGT +
Preference number: 5 (lower is better)
Translates to: LHGDDEILKCHAHKSTLKLGHNS*KYGGQC
Trigger: ACATTGACCACCATACTTCAAGGAATTATGTCCTAA...TTTTAATGTGCTTTTGTGGGCATGGCATTTTAGGATTTCATCATCACCGTGTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp CAGACTAGGTTAGTAGCATGCATTCCATTCTGCAATAAGAATACCGTTAAACTATATTTAGTCCTTCTCTaGTACTCAACACTTGCATTC +
Preference number: 5 (lower is better)
Translates to: QTRLVACIPFCNKNTVKLYLVLL*YSTLAF
Trigger: GAATGCAAGTGTTGAGTACAAGAGAAGGACTAAATA...TAGTTTAACGGTATTCTTATTGCAGAATGGAATGCATGCTACTAACCTAGTCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp AGAAAGGAAATAAGCAATATGATACATGTAATAGCAGTTCCTCAGAGAACAAGCCTTCAGATGATGATTTaGAACTACCAGGACTACTGT +
Preference number: 5 (lower is better)
Translates to: RKEISNMIHVIAVPQRTSLQMMI*NYQDYC
Trigger: ACAGTAGTCCTGGTAGTTCAAAATCATCATCTGAAG...GCTTGTTCTCTGAGGAACTGCTATTACATGTATCATATTGCTTATTTCCTTTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS-3UTR CAA 90 bp ACAAAAACTGATCTACATTTCAATGGGTATGCTAACTTGAATTGTGAGCAATGGCTTCAGATGATGATTTaGAACTACCAGGACTACTGT +
Preference number: 5 (lower is better)
Translates to: TKTDLHFNGYANLNCEQWLQMMI*NYQDYC
Trigger: ACAGTAGTCCTGGTAGTTCAAAATCATCATCTGAAG...CCATTGCTCACAATTCAAGTTAGCATACCCATTGAAATGTAGATCAGTTTTTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS-3UTR CAA 90 bp TCACTGAGATTACATTGCCTTAAAACATCAGCGAATATGCATAGGAAAAATACGTTAGTTTCTCGGAATTaGAGTTCAGGACTTTCATCA +
Preference number: 5 (lower is better)
Translates to: SLRLHCLKTSANMHRKNTLVSRN*SSGLSS
Trigger: TGATGAAAGTCCTGAACTCAAATTCCGAGAAACTAA...CGTATTTTTCCTATGCATATTCGCTGATGTTTTAAGGCAATGTAATCTCAGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000182407.8
CDS CAA 72 bp GAGGGCGACTCCGCAGCGGCCGCGGGGACGCTTCCCTaGGGCAGCCCCTGCGCCCTTGACATGACAGCAGCG +
Preference number: 6 (lower is better)
Translates to: EGDSAAAAGTLP*GSPCALDMTAA
Trigger: CGCTGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCGCGGCCGCTGCGGAGTCGCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp CTGTGCATGGAGGGCGACTCCGCAGCGGCCGCGGGGACGCTTCCCTaGGGCAGCCCCTGCGCCCTTGACATGACAGCAGCGATCTGTCTC +
Preference number: 6 (lower is better)
Translates to: LCMEGDSAAAAGTLP*GSPCALDMTAAICL
Trigger: GAGACAGATCGCTGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCGCGGCCGCTGCGGAGTCGCCCTCCATGCACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GCAGCGGCCGCGGGGACGCTTCCCTTGGGCAGCCCCTaGGCCCTTGACATGACAGCAGCGATCTGTCTCCTC +
Preference number: 6 (lower is better)
Translates to: AAAAGTLPLGSP*ALDMTAAICLL
Trigger: GAGGAGACAGATCGCTGCTGTCATGTCAAGGGCGCAGGGGCTGCCCAAGGGAAGCGTCCCCGCGGCCGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp GCTGATGGGTGCGGACCTGTGGACTTGGGTGGTCCCTaGGCAGCCAGAGTCTGGGATGGGGGAGGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: ADGCGPVDLGGP*AARVWDGGGAC
Trigger: GCAAGCCCCTCCCCCATCCCAGACTCTGGCTGCTCAGGGACCACCCAAGTCCACAGGTCCGCACCCATCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CGGAGGCTTCGGGGGCTGCTGAGACTGGGGTGTGGCTaGGCCAGTCGTAGGTCGTGTGCCAGACGGTGTTGG +
Preference number: 6 (lower is better)
Translates to: RRLRGLLRLGCG*ASRRSCARRCW
Trigger: CCAACACCGTCTGGCACACGACCTACGACTGGCCAAGCCACACCCCAGTCTCAGCAGCCCCCGAAGCCTCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp CTGCACAGCGGCTTCAGCTGCGGCTATGGCCGCCCCTaGATCTTCCAGGTGGGTCTGGGCGACACTGGTTTT +
Preference number: 6 (lower is better)
Translates to: LHSGFSCGYGRP*IFQVGLGDTGF
Trigger: AAAACCAGTGTCGCCCAGACCCACCTGGAAGATGCAGGGGCGGCCATAGCCGCAGCTGAAGCCGCTGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TCTTGGCAGGTGCTGATGGGTGCGGACCTGTGGACTTaGGTGGTCCCTGAGCAGCCAGAGTCTGGGATGGGG +
Preference number: 6 (lower is better)
Translates to: SWQVLMGADLWT*VVPEQPESGMG
Trigger: CCCCATCCCAGACTCTGGCTGCTCAGGGACCACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CAGTCGTCTTGGCAGGTGCTGATGGGTGCGGACCTGTaGACTTGGGTGGTCCCTGAGCAGCCAGAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: QSSWQVLMGADL*TWVVPEQPESG
Trigger: CCCAGACTCTGGCTGCTCAGGGACCACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGACGACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GGACTTCCCTGTCCCTGCTGGTTGAGCTGGGGACTTTaGTGGCCCTGGTTGCTGGACTGTGGCCTTTGCAGG +
Preference number: 6 (lower is better)
Translates to: GLPCPCWLSWGL*WPWLLDCGLCR
Trigger: CCTGCAAAGGCCACAGTCCAGCAACCAGGGCCAGCAAAGTCCCCAGCTCAACCAGCAGGGACAGGGAAGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp TGGTTGAATGCGGAGTTGCTGCACAGCGGCTTCAGCTaGGGCTATGGCCGCCCCTGCATCTTCCAGGTGGGT +
Preference number: 6 (lower is better)
Translates to: WLNAELLHSGFS*GYGRPCIFQVG
Trigger: ACCCACCTGGAAGATGCAGGGGCGGCCATAGCCGCAGCTGAAGCCGCTGTGCAGCAACTCCGCATTCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp CTTCACTGTCCACGCTATACCCACTGCCAACGCTGCTaGCCGAGGAGCCAGTGGACACGGAGGTCTCTGCAG +
Preference number: 6 (lower is better)
Translates to: LHCPRYTHCQRC*PRSQWTRRSLQ
Trigger: CTGCAGAGACCTCCGTGTCCACTGGCTCCTCGGGCAGCAGCGTTGGCAGTGGGTATAGCGTGGACAGTGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS CCA 72 bp GCTAAGACCATGCTGAGGGGGACGCCCAGGGTCCGGTaGCTTTCCGGGTTGCTGTGGAGCCTGACTACTATC +
Preference number: 6 (lower is better)
Translates to: AKTMLRGTPRVR*LSGLLWSLTTI
Trigger: GATAGTAGTCAGGCTCCACAGCAACCCGGAAAGCCACCGGACCCTGGGCGTCCCCCTCAGCATGGTCTTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TGTCCCTGCTGGTTGAGCTGGGGACTTTGCTGGCCCTaGTTGCTGGACTGTGGCCTTTGCAGGTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: CPCWLSWGLCWP*LLDCGLCRSRL
Trigger: CAGCCTGGACCTGCAAAGGCCACAGTCCAGCAACCAGGGCCAGCAAAGTCCCCAGCTCAACCAGCAGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CTTCCCTGTCCCTGCTGGTTGAGCTGGGGACTTTGCTaGCCCTGGTTGCTGGACTGTGGCCTTTGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: LPCPCWLSWGLC*PWLLDCGLCRS
Trigger: GGACCTGCAAAGGCCACAGTCCAGCAACCAGGGCCAGCAAAGTCCCCAGCTCAACCAGCAGGGACAGGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp AGCCTGTTGAGCTGGGGGCTTGGCTGTCACTGGAGGTaGTGCTGGGGACTTCCCTGTCCCTGCTGGTTGAGC +
Preference number: 6 (lower is better)
Translates to: SLLSWGLGCHWR*CWGLPCPCWLS
Trigger: GCTCAACCAGCAGGGACAGGGAAGTCCCCAGCACAACCTCCAGTGACAGCCAAGCCCCCAGCTCAACAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GGCTTCTGGGCGAGGACGGCCTTCTCGGGCTCTGTAGGTGGAGGTTaGCTGACCTTCCCAGGTGGGGGCTTCTTGTCTTTCTCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: GFWARTAFSGSVGGG*LTFPGGGFLSFSAF
Trigger: GAAGGCAGAGAAAGACAAGAAGCCCCCACCTGGGAAGGTCAGCAAACCTCCACCTACAGAGCCCGAGAAGGCCGTCCTCGCCCAGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp CCTACGTTGAGTTCCGTTCTGCAGAGAGGACAGGCCGGTTTGGGTTaGGTGGTCTTGTCTGGCTTCTGGGCGAGGACGGCCTTCTCGGGC +
Preference number: 6 (lower is better)
Translates to: PTLSSVLQRGQAGLG*VVLSGFWARTAFSG
Trigger: GCCCGAGAAGGCCGTCCTCGCCCAGAAGCCAGACAAGACCACCAAACCCAAACCGGCCTGTCCTCTCTGCAGAACGGAACTCAACGTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GAGTTTAGCTGTCCCTGGCTGCTGGGCTGGGGACTTTaGTGGCCCTGGTGGAACCTTTCCCTGACCAGGAGT +
Preference number: 6 (lower is better)
Translates to: EFSCPWLLGWGL*WPWWNLSLTRS
Trigger: ACTCCTGGTCAGGGAAAGGTTCCACCAGGGCCAGCAAAGTCCCCAGCCCAGCAGCCAGGGACAGCTAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GTTGCTGGCTGTACTGAGGCAGCCTTTGGGGTTGGCTaGGGTGAGGATGGGATTGCTGCCAGTTCACCTCCC +
Preference number: 6 (lower is better)
Translates to: VAGCTEAAFGVG*GEDGIAASSPP
Trigger: GGGAGGTGAACTGGCAGCAATCCCATCCTCACCGCAGCCAACCCCAAAGGCTGCCTCAGTACAGCCAGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GACATGACCAGTGGGGACTGCTGGAGTGAGACTTTCTaGAGCTCTGCCGCCAGCTGCTTGGGATCCACGCCT +
Preference number: 6 (lower is better)
Translates to: DMTSGDCWSETF*SSAASCLGSTP
Trigger: AGGCGTGGATCCCAAGCAGCTGGCGGCAGAGCTGCAGAAAGTCTCACTCCAGCAGTCCCCACTGGTCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TTTAGCTGTCCCTGGCTGCTGGGCTGGGGACTTTGCTaGCCCTGGTGGAACCTTTCCCTGACCAGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: FSCPWLLGWGLC*PWWNLSLTRSL
Trigger: CAGACTCCTGGTCAGGGAAAGGTTCCACCAGGGCCAGCAAAGTCCCCAGCCCAGCAGCCAGGGACAGCTAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CCGTTCTGCAGAGAGGACAGGCCGGTTTGGGTTTGGTaGTCTTGTCTGGCTTCTGGGCGAGGACGGCCTTCT +
Preference number: 6 (lower is better)
Translates to: PFCREDRPVWVW*SCLASGRGRPS
Trigger: AGAAGGCCGTCCTCGCCCAGAAGCCAGACAAGACCACCAAACCCAAACCGGCCTGTCCTCTCTGCAGAACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp ACGTCTGAGGTGTGGCGCCTGGCAGATCTTCAGGCCTaGTGTCTGGCTGCTGCTCTCCTTCACAAGCCAGTG +
Preference number: 6 (lower is better)
Translates to: TSEVWRLADLQA*CLAAALLHKPV
Trigger: CACTGGCTTGTGAAGGAGAGCAGCAGCCAGACACCAGGCCTGAAGATCTGCCAGGCGCCACACCTCAGACGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp GCCCGGGGCTGGGAACAGAACTGGATCCTGCCGATGTaGGACCTGAGTGAGCATGAGCCCCTTTCTCCACAA +
Preference number: 6 (lower is better)
Translates to: ARGWEQNWILPM*DLSEHEPLSPQ
Trigger: TTGTGGAGAAAGGGGCTCATGCTCACTCAGGTCCCACATCGGCAGGATCCAGTTCTGTTCCCAGCCCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp GCGAGGACGGCCTTCTCGGGCTCTGTAGGTGGAGGTTaGCTGACCTTCCCAGGTGGGGGCTTCTTGTCTTTC +
Preference number: 6 (lower is better)
Translates to: ARTAFSGSVGGG*LTFPGGGFLSF
Trigger: GAAAGACAAGAAGCCCCCACCTGGGAAGGTCAGCAAACCTCCACCTACAGAGCCCGAGAAGGCCGTCCTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp AGTTCCGTTCTGCAGAGAGGACAGGCCGGTTTGGGTTaGGTGGTCTTGTCTGGCTTCTGGGCGAGGACGGCC +
Preference number: 6 (lower is better)
Translates to: SSVLQRGQAGLG*VVLSGFWARTA
Trigger: GGCCGTCCTCGCCCAGAAGCCAGACAAGACCACCAAACCCAAACCGGCCTGTCCTCTCTGCAGAACGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CCGGTGGTTGGTAGGCTTTGTTGGTTGAATGCGGAGTaGCTGCACAGCGGCTTCAGCTGCGGCTATGGCCGC +
Preference number: 6 (lower is better)
Translates to: PVVGRLCWLNAE*LHSGFSCGYGR
Trigger: GCGGCCATAGCCGCAGCTGAAGCCGCTGTGCAGCAACTCCGCATTCAACCAACAAAGCCTACCAACCACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS CAA 90 bp GCAACAGGGGCCTTTGCTTGTTCAGGTAGGGCTGCAGAAGGCTTCTaGGGAGGGGCTGGCTTAGGTAAGGCCTCTGCCACTGGAGGCTGT +
Preference number: 6 (lower is better)
Translates to: ATGAFACSGRAAEGF*GGAGLGKASATGGC
Trigger: ACAGCCTCCAGTGGCAGAGGCCTTACCTAAGCCAGCCCCTCCCAAGAAGCCTTCTGCAGCCCTACCTGAACAAGCAAAGGCCCCTGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp AGTTCCGTTCTGCAGAGAGGACAGGCCGGTTTGGGTTTGGTGGTCTaGTCTGGCTTCTGGGCGAGGACGGCCTTCTCGGGCTCTGTAGGT +
Preference number: 6 (lower is better)
Translates to: SSVLQRGQAGLGLVV*SGFWARTAFSGSVG
Trigger: ACCTACAGAGCCCGAGAAGGCCGTCCTCGCCCAGAAGCCAGACAAGACCACCAAACCCAAACCGGCCTGTCCTCTCTGCAGAACGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GCTGGGCTCCCCTCGGCCTTCCTTTGCAGTGCCTTCTaGCTGAGGCTGTGTTACGTCTCTGCTTTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: AGLPSAFLCSAF*LRLCYVSAFLL
Trigger: CAGAAGGAAAGCAGAGACGTAACACAGCCTCAGGCAGAAGGCACTGCAAAGGAAGGCCGAGGGGAGCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp GGGACGCCCAGGGTCCGGTGGCTTTCCGGGTTGCTGTaGAGCCTGACTACTATCCAACTCTTGTTTCCTGTG +
Preference number: 6 (lower is better)
Translates to: GTPRVRWLSGLL*SLTTIQLLFPV
Trigger: CACAGGAAACAAGAGTTGGATAGTAGTCAGGCTCCACAGCAACCCGGAAAGCCACCGGACCCTGGGCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp AGGTCTTCTCTAAGCCAGCCTGTTGAGCTGGGGGCTTaGCTGTCACTGGAGGTTGTGCTGGGGACTTCCCTG +
Preference number: 6 (lower is better)
Translates to: RSSLSQPVELGA*LSLEVVLGTSL
Trigger: CAGGGAAGTCCCCAGCACAACCTCCAGTGACAGCCAAGCCCCCAGCTCAACAGGCTGGCTTAGAGAAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CTGCAGATATGGGCGGCAAAGGTCCAGCTGCAGCCCTaGCCATTCCCATTGGCTGGCCAACAGGACTTAGTG +
Preference number: 6 (lower is better)
Translates to: LQIWAAKVQLQP*PFPLAGQQDLV
Trigger: CACTAAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGGCTGCAGCTGGACCTTTGCCGCCCATATCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TTTTGCTTACTGAAGGTGACCCTGGCTGCCCGGGGCTaGGAACAGAACTGGATCCTGCCGATGTGGGACCTG +
Preference number: 6 (lower is better)
Translates to: FCLLKVTLAARG*EQNWILPMWDL
Trigger: CAGGTCCCACATCGGCAGGATCCAGTTCTGTTCCCAGCCCCGGGCAGCCAGGGTCACCTTCAGTAAGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp CTGAGGGGGACGCCCAGGGTCCGGTGGCTTTCCGGGTaGCTGTGGAGCCTGACTACTATCCAACTCTTGTTT +
Preference number: 6 (lower is better)
Translates to: LRGTPRVRWLSG*LWSLTTIQLLF
Trigger: AAACAAGAGTTGGATAGTAGTCAGGCTCCACAGCAACCCGGAAAGCCACCGGACCCTGGGCGTCCCCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TGGCTGTTGCTGGCTGTACTGAGGCAGCCTTTGGGGTaGGCTGCGGTGAGGATGGGATTGCTGCCAGTTCAC +
Preference number: 6 (lower is better)
Translates to: WLLLAVLRQPLG*AAVRMGLLPVH
Trigger: GTGAACTGGCAGCAATCCCATCCTCACCGCAGCCAACCCCAAAGGCTGCCTCAGTACAGCCAGCAACAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GACACATCAGTAGGCTTGCTGCCGCCGTGCTTCTTTTaGCTTACTGAAGGTGACCCTGGCTGCCCGGGGCTG +
Preference number: 6 (lower is better)
Translates to: DTSVGLLPPCFF*LTEGDPGCPGL
Trigger: CAGCCCCGGGCAGCCAGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCGGCAGCAAGCCTACTGATGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GTGATTTGCTGGCTGTTGCTGGCTGTACTGAGGCAGCCTTTGGGGTaGGCTGCGGTGAGGATGGGATTGCTGCCAGTTCACCTCCCAGAG +
Preference number: 6 (lower is better)
Translates to: VICWLLLAVLRQPLG*AAVRMGLLPVHLPE
Trigger: CTCTGGGAGGTGAACTGGCAGCAATCCCATCCTCACCGCAGCCAACCCCAAAGGCTGCCTCAGTACAGCCAGCAACAGCCAGCAAATCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp TCTTTGGGGAAGCCTGCTGTGACGGTACAGGTGATTTGCTGGCTGTaGCTGGCTGTACTGAGGCAGCCTTTGGGGTTGGCTGCGGTGAGG +
Preference number: 6 (lower is better)
Translates to: SLGKPAVTVQVICWL*LAVLRQPLGLAAVR
Trigger: CCTCACCGCAGCCAACCCCAAAGGCTGCCTCAGTACAGCCAGCAACAGCCAGCAAATCACCTGTACCGTCACAGCAGGCTTCCCCAAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp AAGACCATGCTGAGGGGGACGCCCAGGGTCCGGTGGCTTTCCGGGTaGCTGTGGAGCCTGACTACTATCCAACTCTTGTTTCCTGTGCAT +
Preference number: 6 (lower is better)
Translates to: KTMLRGTPRVRWLSG*LWSLTTIQLLFPVH
Trigger: ATGCACAGGAAACAAGAGTTGGATAGTAGTCAGGCTCCACAGCAACCCGGAAAGCCACCGGACCCTGGGCGTCCCCCTCAGCATGGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GCTGGACTGTGGCCTTTGCAGGTCCAGGCTGTTGGGCTACAGGTTTaGCTTGCTGAGCTGGTGTTTGGGCTGGACTCTGCTGGGAAGGTT +
Preference number: 6 (lower is better)
Translates to: AGLWPLQVQAVGLQV*LAELVFGLDSAGKV
Trigger: AACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAGGCCACAGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp TTTTCAGCTGCCGGGCCTTTTGTTTCCTTCTTCACAGCAGTCGTCTaGGCAGGTGCTGATGGGTGCGGACCTGTGGACTTGGGTGGTCCC +
Preference number: 6 (lower is better)
Translates to: FSAAGPFVSFFTAVV*AGADGCGPVDLGGP
Trigger: GGGACCACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGACGACTGCTGTGAAGAAGGAAACAAAAGGCCCGGCAGCTGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GCAGTCTTGGACACATCAGTAGGCTTGCTGCCGCCGTGCTTCTTTTaGCTTACTGAAGGTGACCCTGGCTGCCCGGGGCTGGGAACAGAA +
Preference number: 6 (lower is better)
Translates to: AVLDTSVGLLPPCFF*LTEGDPGCPGLGTE
Trigger: TTCTGTTCCCAGCCCCGGGCAGCCAGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCGGCAGCAAGCCTACTGATGTGTCCAAGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp GCAGGTCCAGGCTGTTGGGCTACAGGTTTTGCTTGCTaGGCTGGTGTTTGGGCTGGACTCTGCTGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: AGPGCWATGFAC*AGVWAGLCWEG
Trigger: ACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp GGCTGCTGCAATGAGGTCTTCTCTAAGCCAGCCTGTTaGGCTGGGGGCTTGGCTGTCACTGGAGGTTGTGCT +
Preference number: 6 (lower is better)
Translates to: GCCNEVFSKPAC*AGGLAVTGGCA
Trigger: AGCACAACCTCCAGTGACAGCCAAGCCCCCAGCTCAACAGGCTGGCTTAGAGAAGACCTCATTGCAGCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp TGTTTCCTTCTTCACAGCAGTCGTCTTGGCAGGTGCTaGTGGGTGCGGACCTGTGGACTTGGGTGGTCCCTG +
Preference number: 6 (lower is better)
Translates to: CFLLHSSRLGRC*WVRTCGLGWSL
Trigger: CAGGGACCACCCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGACGACTGCTGTGAAGAAGGAAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp GGCTCCCCTCGGCCTTCCTTTGCAGTGCCTTCTGCCTaGGGCTGTGTTACGTCTCTGCTTTCCTTCTGTCTG +
Preference number: 6 (lower is better)
Translates to: GSPRPSFAVPSA*GCVTSLLSFCL
Trigger: CAGACAGAAGGAAAGCAGAGACGTAACACAGCCTCAGGCAGAAGGCACTGCAAAGGAAGGCCGAGGGGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GGCCTTTGCAGGTCCAGGCTGTTGGGCTACAGGTTTTaGTTGCTGAGCTGGTGTTTGGGCTGGACTCTGCTG +
Preference number: 6 (lower is better)
Translates to: GLCRSRLLGYRF*LLSWCLGWTLL
Trigger: CAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GGACTTTGCTGGCCCTGGTTGCTGGACTGTGGCCTTTaGAGGTCCAGGCTGTTGGGCTACAGGTTTTGCTTG +
Preference number: 6 (lower is better)
Translates to: GLCWPWLLDCGL*RSRLLGYRFCL
Trigger: CAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAGGCCACAGTCCAGCAACCAGGGCCAGCAAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp AGGTCCATGAAGGGTTGGCTGTTTCACCAGTGGCGGTaGCTTTTTGGACTCCGGTGCTTTGGGGCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: RSMKGWLFHQWR*LFGLRCFGAVL
Trigger: CAGGACAGCCCCAAAGCACCGGAGTCCAAAAAGCCACCGCCACTGGTGAAACAGCCAACCCTTCATGGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CCGGGCCTTTTGTTTCCTTCTTCACAGCAGTCGTCTTaGCAGGTGCTGATGGGTGCGGACCTGTGGACTTGG +
Preference number: 6 (lower is better)
Translates to: PGLLFPSSQQSS*QVLMGADLWTW
Trigger: CCAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGACGACTGCTGTGAAGAAGGAAACAAAAGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CAGTGCCCATGGTGCTGTAAGTTGACTGTGTTCCCGTaGACGCCTCCTCAGGAGGGGGATTTGGCAGTGTTC +
Preference number: 6 (lower is better)
Translates to: QCPWCCKLTVFP*TPPQEGDLAVF
Trigger: GAACACTGCCAAATCCCCCTCCTGAGGAGGCGTCCACGGGAACACAGTCAACTTACAGCACCATGGGCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp CTGCAGCTCTGCCGCCAGCTGCTTGGGATCCACGCCTaGAGACTTTGCCTTATCCACAACTTTTGGTGGCTC +
Preference number: 6 (lower is better)
Translates to: LQLCRQLLGIHA*RLCLIHNFWWL
Trigger: GAGCCACCAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAGAGCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp AGGCAGCCTTTGGGGTTGGCTGCGGTGAGGATGGGATaGCTGCCAGTTCACCTCCCAGAGCTCTTTGCATCT +
Preference number: 6 (lower is better)
Translates to: RQPLGLAAVRMG*LPVHLPELFAS
Trigger: AGATGCAAAGAGCTCTGGGAGGTGAACTGGCAGCAATCCCATCCTCACCGCAGCCAACCCCAAAGGCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp ATTTGCTGGCTGTTGCTGGCTGTACTGAGGCAGCCTTaGGGGTTGGCTGCGGTGAGGATGGGATTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: ICWLLLAVLRQP*GLAAVRMGLLP
Trigger: TGGCAGCAATCCCATCCTCACCGCAGCCAACCCCAAAGGCTGCCTCAGTACAGCCAGCAACAGCCAGCAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GCCTTTGCTTGTTCAGGTAGGGCTGCAGAAGGCTTCTaGGGAGGGGCTGGCTTAGGTAAGGCCTCTGCCACT +
Preference number: 6 (lower is better)
Translates to: AFACSGRAAEGF*GGAGLGKASAT
Trigger: AGTGGCAGAGGCCTTACCTAAGCCAGCCCCTCCCAAGAAGCCTTCTGCAGCCCTACCTGAACAAGCAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GCCGGGCCTTTTGTTTCCTTCTTCACAGCAGTCGTCTaGGCAGGTGCTGATGGGTGCGGACCTGTGGACTTG +
Preference number: 6 (lower is better)
Translates to: AGPFVSFFTAVV*AGADGCGPVDL
Trigger: CAAGTCCACAGGTCCGCACCCATCAGCACCTGCCAAGACGACTGCTGTGAAGAAGGAAACAAAAGGCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp ACGTTGAGTTCCGTTCTGCAGAGAGGACAGGCCGGTTaGGGTTTGGTGGTCTTGTCTGGCTTCTGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: TLSSVLQRGQAG*GLVVLSGFWAR
Trigger: CCTCGCCCAGAAGCCAGACAAGACCACCAAACCCAAACCGGCCTGTCCTCTCTGCAGAACGGAACTCAACGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GACTGTGGCCTTTGCAGGTCCAGGCTGTTGGGCTACAGGTTTTGCTaGCTGAGCTGGTGTTTGGGCTGGACTCTGCTGGGAAGGTTTTGC +
Preference number: 6 (lower is better)
Translates to: DCGLCRSRLLGYRFC*LSWCLGWTLLGRFC
Trigger: GCAAAACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAGGCCACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GCCCTGGTGGAACCTTTCCCTGACCAGGAGTCTGAGCTAGAGACTTaGGCCCAGGCTGCTGCAATGAGGTCTTCTCTAAGCCAGCCTGTT +
Preference number: 6 (lower is better)
Translates to: ALVEPFPDQESELET*AQAAAMRSSLSQPV
Trigger: AACAGGCTGGCTTAGAGAAGACCTCATTGCAGCAGCCTGGGCCAAAGTCTCTAGCTCAGACTCCTGGTCAGGGAAAGGTTCCACCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GGAAGTTCCTTCTTTGGGGAAGCCTGCTGTGACGGTACAGGTGATTaGCTGGCTGTTGCTGGCTGTACTGAGGCAGCCTTTGGGGTTGGC +
Preference number: 6 (lower is better)
Translates to: GSSFFGEACCDGTGD*LAVAGCTEAAFGVG
Trigger: GCCAACCCCAAAGGCTGCCTCAGTACAGCCAGCAACAGCCAGCAAATCACCTGTACCGTCACAGCAGGCTTCCCCAAAGAAGGAACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GGGGACTGCTGGAGTGAGACTTTCTGCAGCTCTGCCGCCAGCTGCTaGGGATCCACGCCTGGAGACTTTGCCTTATCCACAACTTTTGGT +
Preference number: 6 (lower is better)
Translates to: GDCWSETFCSSAASC*GSTPGDFALSTTFG
Trigger: ACCAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAGAGCTGCAGAAAGTCTCACTCCAGCAGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp CCAGGGTCCGGTGGCTTTCCGGGTTGCTGTGGAGCCTaGCTACTATCCAACTCTTGTTTCCTGTGCATGGAG +
Preference number: 6 (lower is better)
Translates to: PGSGGFPGCCGA*LLSNSCFLCME
Trigger: CTCCATGCACAGGAAACAAGAGTTGGATAGTAGTCAGGCTCCACAGCAACCCGGAAAGCCACCGGACCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp TCTCTGCTTTCCTTCTGTCTGTCCTTGGGTAACGTCTaGGGTGTGGCGCCTGGCAGATCTTCAGGCCTGGTG +
Preference number: 6 (lower is better)
Translates to: SLLSFCLSLGNV*GVAPGRSSGLV
Trigger: CACCAGGCCTGAAGATCTGCCAGGCGCCACACCTCAGACGTTACCCAAGGACAGACAGAAGGAAAGCAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp TGTCTTTGCTGGGCTCCCCTCGGCCTTCCTTTGCAGTaGCTTCTGCCTGAGGCTGTGTTACGTCTCTGCTTT +
Preference number: 6 (lower is better)
Translates to: CLCWAPLGLPLQ*LLPEAVLRLCF
Trigger: AAAGCAGAGACGTAACACAGCCTCAGGCAGAAGGCACTGCAAAGGAAGGCCGAGGGGAGCCCAGCAAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GTTGGACTCAGAGGCTTGGGGTCAGACATTGAACGCTaGATCATCTTGGCTGTCTTAGGGCTTGCCGGGGGA +
Preference number: 6 (lower is better)
Translates to: VGLRGLGSDIER*IILAVLGLAGG
Trigger: TCCCCCGGCAAGCCCTAAGACAGCCAAGATGATGCAGCGTTCAATGTCTGACCCCAAGCCTCTGAGTCCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp CCAGGTGGGTCTGGGCGACACTGGTTTTGCTTTGACTaGGAGATGGTCCATGAGATCGGAGATGGCCTTCAG +
Preference number: 6 (lower is better)
Translates to: PGGSGRHWFCFD*EMVHEIGDGLQ
Trigger: CTGAAGGCCATCTCCGATCTCATGGACCATCTCGCAGTCAAAGCAAAACCAGTGTCGCCCAGACCCACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp AGTTTTTGTAGGCCCAGGTACCTTAGCTGCAGTCTGTaGGCCAGGCTGTTGGGCTGGGAGTTTAGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: SFCRPRYLSCSL*ARLLGWEFSCP
Trigger: GGGACAGCTAAACTCCCAGCCCAACAGCCTGGCCCACAGACTGCAGCTAAGGTACCTGGGCCTACAAAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp AGAGAGGCCTTGTGCTGGCGCCTGTGCTGCAGAAGTTaGTGGTGCTTGCAGAGGTCTTCCTGTTACCGTTTG +
Preference number: 6 (lower is better)
Translates to: REALCWRLCCRS*WCLQRSSCYRL
Trigger: CAAACGGTAACAGGAAGACCTCTGCAAGCACCACCAACTTCTGCAGCACAGGCGCCAGCACAAGGCCTCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp GAAGGGTTGGCTGTTTCACCAGTGGCGGTGGCTTTTTaGACTCCGGTGCTTTGGGGCTGTCCTGTTTGGATG +
Preference number: 6 (lower is better)
Translates to: EGLAVSPVAVAF*TPVLWGCPVWM
Trigger: CATCCAAACAGGACAGCCCCAAAGCACCGGAGTCCAAAAAGCCACCGCCACTGGTGAAACAGCCAACCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TTTCCTTCTGTCTGTCCTTGGGTAACGTCTGAGGTGTaGCGCCTGGCAGATCTTCAGGCCTGGTGTCTGGCT +
Preference number: 6 (lower is better)
Translates to: FPSVCPWVTSEV*RLADLQAWCLA
Trigger: AGCCAGACACCAGGCCTGAAGATCTGCCAGGCGCCACACCTCAGACGTTACCCAAGGACAGACAGAAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TTCTCCACAACTGATGACATGACCAGTGGGGACTGCTaGAGTGAGACTTTCTGCAGCTCTGCCGCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: FSTTDDMTSGDC*SETFCSSAASC
Trigger: GCAGCTGGCGGCAGAGCTGCAGAAAGTCTCACTCCAGCAGTCCCCACTGGTCATGTCATCAGTTGTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp CTTTGCAGGTCCAGGCTGTTGGGCTACAGGTTTTGCTaGCTGAGCTGGTGTTTGGGCTGGACTCTGCTGGGA +
Preference number: 6 (lower is better)
Translates to: LCRSRLLGYRFC*LSWCLGWTLLG
Trigger: TCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TGGCCTTTGCAGGTCCAGGCTGTTGGGCTACAGGTTTaGCTTGCTGAGCTGGTGTTTGGGCTGGACTCTGCT +
Preference number: 6 (lower is better)
Translates to: WPLQVQAVGLQV*LAELVFGLDSA
Trigger: AGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TGGAGTGAGACTTTCTGCAGCTCTGCCGCCAGCTGCTaGGGATCCACGCCTGGAGACTTTGCCTTATCCACA +
Preference number: 6 (lower is better)
Translates to: WSETFCSSAASC*GSTPGDFALST
Trigger: TGTGGATAAGGCAAAGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAGAGCTGCAGAAAGTCTCACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GTTGAGGCTGAGGTTTTGTGGCAACAGGTTGTTGAGGCTGGGGCTTaGCTGGAATGGGCTGCTGAGGTGAAGGCTTTGTTGGACCAGGCT +
Preference number: 6 (lower is better)
Translates to: VEAEVLWQQVVEAGA*LEWAAEVKALLDQA
Trigger: AGCCTGGTCCAACAAAGCCTTCACCTCAGCAGCCCATTCCAGCAAAGCCCCAGCCTCAACAACCTGTTGCCACAAAACCTCAGCCTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GCTGTACTGAGGCAGCCTTTGGGGTTGGCTGCGGTGAGGATGGGATaGCTGCCAGTTCACCTCCCAGAGCTCTTTGCATCTGACAGTTTA +
Preference number: 6 (lower is better)
Translates to: AVLRQPLGLAAVRMG*LPVHLPELFASDSL
Trigger: TAAACTGTCAGATGCAAAGAGCTCTGGGAGGTGAACTGGCAGCAATCCCATCCTCACCGCAGCCAACCCCAAAGGCTGCCTCAGTACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp CTGTCGTCTTCGGTTGCTTTGGTTCAACATCTGCAACAGGGGCCTTaGCTTGTTCAGGTAGGGCTGCAGAAGGCTTCTTGGGAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: LSSSVALVQHLQQGP*LVQVGLQKASWEGL
Trigger: CAGCCCCTCCCAAGAAGCCTTCTGCAGCCCTACCTGAACAAGCAAAGGCCCCTGTTGCAGATGTTGAACCAAAGCAACCGAAGACGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp GCTCCGAACCCGAATAGCTTCCCTGTCACAGTTTCTTaGGGAGTTGTGGGCTGTGATTTGGGGGCATCAGCG +
Preference number: 6 (lower is better)
Translates to: APNPNSFPVTVS*GVVGCDLGASA
Trigger: CGCTGATGCCCCCAAATCACAGCCCACAACTCCTCAAGAAACTGTGACAGGGAAGCTATTCGGGTTCGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp CCTGGTGTCTGGCTGCTGCTCTCCTTCACAAGCCAGTaGAGCCACTTTGCCTATGGGTCCTTCTTCGGGAAT +
Preference number: 6 (lower is better)
Translates to: PGVWLLLSFTSQ*SHFAYGSFFGN
Trigger: ATTCCCGAAGAAGGACCCATAGGCAAAGTGGCTTCACTGGCTTGTGAAGGAGAGCAGCAGCCAGACACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp AGACCGCCAGACGGCGACCTGTATGTGGGCTTTTCCTaGCCCAAGATCTCTCCAGATACAGAGTGTGGGGAT +
Preference number: 6 (lower is better)
Translates to: RPPDGDLYVGFS*PKISPDTECGD
Trigger: ATCCCCACACTCTGTATCTGGAGAGATCTTGGGTCAGGAAAAGCCCACATACAGGTCGCCGTCTGGCGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GCCTTGTGCTGGCGCCTGTGCTGCAGAAGTTGGTGGTaGTTGCAGAGGTCTTCCTGTTACCGTTTGGCTTAT +
Preference number: 6 (lower is better)
Translates to: ALCWRLCCRSWW*LQRSSCYRLAY
Trigger: ATAAGCCAAACGGTAACAGGAAGACCTCTGCAAGCACCACCAACTTCTGCAGCACAGGCGCCAGCACAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GCAGTCTTGGACACATCAGTAGGCTTGCTGCCGCCGTaGTTCTTTTTGCTTACTGAAGGTGACCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: AVLDTSVGLLPP*FFLLTEGDPGC
Trigger: GCAGCCAGGGTCACCTTCAGTAAGCAAAAAGAAGCACGGCGGCAGCAAGCCTACTGATGTGTCCAAGACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TCCAGGCTGTTGGGCTACAGGTTTTGCTTGCTGAGCTaGTGTTTGGGCTGGACTCTGCTGGGAAGGTTTTGC +
Preference number: 6 (lower is better)
Translates to: SRLLGYRFCLLS*CLGWTLLGRFC
Trigger: GCAAAACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp GCAAAGAGGACAGATGGTTTTAGAGAGGCCTTGTGCTaGCGCCTGTGCTGCAGAAGTTGGTGGTGCTTGCAG +
Preference number: 6 (lower is better)
Translates to: AKRTDGFREALC*RLCCRSWWCLQ
Trigger: CTGCAAGCACCACCAACTTCTGCAGCACAGGCGCCAGCACAAGGCCTCTCTAAAACCATCTGTCCTCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CTGTTGGGCTACAGGTTTTGCTTGCTGAGCTGGTGTTaGGGCTGGACTCTGCTGGGAAGGTTTTGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: LLGYRFCLLSWC*GWTLLGRFCCA
Trigger: GGCACAGCAAAACCTTCCCAGCAGAGTCCAGCCCAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TGGTTGCTGGACTGTGGCCTTTGCAGGTCCAGGCTGTaGGGCTACAGGTTTTGCTTGCTGAGCTGGTGTTTG +
Preference number: 6 (lower is better)
Translates to: WLLDCGLCRSRL*GYRFCLLSWCL
Trigger: CAAACACCAGCTCAGCAAGCAAAACCTGTAGCCCAACAGCCTGGACCTGCAAAGGCCACAGTCCAGCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GGGGCAGCAGCACATATTTTAGTTGCAGGTAACCCATaGCTCCTGCGGGCAGCTGTGGCCTCTACAGTAGGA +
Preference number: 6 (lower is better)
Translates to: GAAAHILVAGNP*LLRAAVASTVG
Trigger: TCCTACTGTAGAGGCCACAGCTGCCCGCAGGAGCAATGGGTTACCTGCAACTAAAATATGTGCTGCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp AGAGGCTTGGGGTCAGACATTGAACGCTGCATCATCTaGGCTGTCTTAGGGCTTGCCGGGGGAACTTTAGCC +
Preference number: 6 (lower is better)
Translates to: RGLGSDIERCII*AVLGLAGGTLA
Trigger: GGCTAAAGTTCCCCCGGCAAGCCCTAAGACAGCCAAGATGATGCAGCGTTCAATGTCTGACCCCAAGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp ATCTTCCAGGTGGGTCTGGGCGACACTGGTTTTGCTTaGACTGCGAGATGGTCCATGAGATCGGAGATGGCC +
Preference number: 6 (lower is better)
Translates to: IFQVGLGDTGFA*TARWSMRSEMA
Trigger: GGCCATCTCCGATCTCATGGACCATCTCGCAGTCAAAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp GTCTGCTGTTGGACTCAGAGGCTTGGGGTCAGACATTaGACGCTGCATCATCTTGGCTGTCTTAGGGCTTGC +
Preference number: 6 (lower is better)
Translates to: VCCWTQRLGVRH*TLHHLGCLRAC
Trigger: GCAAGCCCTAAGACAGCCAAGATGATGCAGCGTTCAATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GTTGCAAAGAGGACAGATGGTTTTAGAGAGGCCTTGTaGTGGCGCCTGTGCTGCAGAAGTTGGTGGTGCTTG +
Preference number: 6 (lower is better)
Translates to: VAKRTDGFREAL*WRLCCRSWWCL
Trigger: CAAGCACCACCAACTTCTGCAGCACAGGCGCCAGCACAAGGCCTCTCTAAAACCATCTGTCCTCTTTGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp CTGTTTCACCAGTGGCGGTGGCTTTTTGGACTCCGGTaGTTTGGGGCTGTCCTGTTTGGATGGAAGTTCCTT +
Preference number: 6 (lower is better)
Translates to: LFHQWRWLFGLR*FGAVLFGWKFL
Trigger: AAGGAACTTCCATCCAAACAGGACAGCCCCAAAGCACCGGAGTCCAAAAAGCCACCGCCACTGGTGAAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp CACACCATACTGCGGTCCAGGAGGTGGAGTCATTCTTaGTGTGGAATACTGCGGGGTACTAATCCCAACTCC +
Preference number: 6 (lower is better)
Translates to: HTILRSRRWSHS*CGILRGTNPNS
Trigger: GGAGTTGGGATTAGTACCCCGCAGTATTCCACAGCAAGAATGACTCCACCTCCTGGACCGCAGTATGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp CTTTGGAAGGGGGTTTGGTCTTGTCACCCTCTGCCGTaGTATCTCCGTATTTCCCTGTTCGCGCTTTTCTCC +
Preference number: 6 (lower is better)
Translates to: LWKGVWSCHPLP*YLRISLFALFS
Trigger: GGAGAAAAGCGCGAACAGGGAAATACGGAGATAGCACGGCAGAGGGTGACAAGACCAAACCCCCTTCCAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp GGAGACTTTGGAAGGGGGTTTGGTCTTGTCACCCTCTaGCGTGCTATCTCCGTATTTCCCTGTTCGCGCTTT +
Preference number: 6 (lower is better)
Translates to: GDFGRGFGLVTL*RAISVFPCSRF
Trigger: AAAGCGCGAACAGGGAAATACGGAGATAGCACGGCAGAGGGTGACAAGACCAAACCCCCTTCCAAAGTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp TGCCGCCAGCTGCTTGGGATCCACGCCTGGAGACTTTaGCTTATCCACAACTTTTGGTGGCTCATGAAGTTC +
Preference number: 6 (lower is better)
Translates to: CRQLLGIHAWRL*LIHNFWWLMKF
Trigger: GAACTTCATGAGCCACCAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp CTGCATCTTCCAGGTGGGTCTGGGCGACACTGGTTTTaGTTTGACTGCGAGATGGTCCATGAGATCGGAGAT +
Preference number: 6 (lower is better)
Translates to: LHLPGGSGRHWF*FDCEMVHEIGD
Trigger: ATCTCCGATCTCATGGACCATCTCGCAGTCAAAGCAAAACCAGTGTCGCCCAGACCCACCTGGAAGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp GCTGTGTTACGTCTCTGCTTTCCTTCTGTCTGTCCTTaGGTAACGTCTGAGGTGTGGCGCCTGGCAGATCTT +
Preference number: 6 (lower is better)
Translates to: AVLRLCFPSVCP*VTSEVWRLADL
Trigger: AAGATCTGCCAGGCGCCACACCTCAGACGTTACCCAAGGACAGACAGAAGGAAAGCAGAGACGTAACACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp GCCAGGAATGGCGTCTCCCAGCATCATCGTCGAAGCTaGTACTACTCTTTCGAGTCAGACGTCTGTGTTTCC +
Preference number: 6 (lower is better)
Translates to: ARNGVSQHHRRS*YYSFESDVCVS
Trigger: GGAAACACAGACGTCTGACTCGAAAGAGTAGTACCAGCTTCGACGATGATGCTGGGAGACGCCATTCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp AGCTGCAGCTGCCAACTTTCTTTTAGGATAAGTGGGTaGCTTAGGAGAAGTTGCTGGAGGCAACGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: SCSCQLSFRISG*LRRSCWRQRWG
Trigger: CCCCCACCGTTGCCTCCAGCAACTTCTCCTAAGCCACCCACTTATCCTAAAAGAAAGTTGGCAGCTGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp GCCTGTCTAGAGCAAGAGGCTCTGGAGGAATTGGTATaGAAACACTCCTGGGAGCAACACTTGGGACTGCAC +
Preference number: 6 (lower is better)
Translates to: ACLEQEALEELV*KHSWEQHLGLH
Trigger: GTGCAGTCCCAAGTGTTGCTCCCAGGAGTGTTTCCATACCAATTCCTCCAGAGCCTCTTGCTCTAGACAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CTGGTTCTAAGGCGTGGCCTGGGGAAAGTGGTGAGATaGGTGAGTAAAGGACTTTTGGAGATTTGGGTGGGG +
Preference number: 6 (lower is better)
Translates to: LVLRRGLGKVVR*VSKGLLEIWVG
Trigger: CCCCACCCAAATCTCCAAAAGTCCTTTACTCACCCATCTCACCACTTTCCCCAGGCCACGCCTTAGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GAACCTTTCCCTGACCAGGAGTCTGAGCTAGAGACTTaGGCCCAGGCTGCTGCAATGAGGTCTTCTCTAAGC +
Preference number: 6 (lower is better)
Translates to: EPFPDQESELET*AQAAAMRSSLS
Trigger: GCTTAGAGAAGACCTCATTGCAGCAGCCTGGGCCAAAGTCTCTAGCTCAGACTCCTGGTCAGGGAAAGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GAGGTTTTGTGGCAACAGGTTGTTGAGGCTGGGGCTTaGCTGGAATGGGCTGCTGAGGTGAAGGCTTTGTTG +
Preference number: 6 (lower is better)
Translates to: EVLWQQVVEAGA*LEWAAEVKALL
Trigger: CAACAAAGCCTTCACCTCAGCAGCCCATTCCAGCAAAGCCCCAGCCTCAACAACCTGTTGCCACAAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TTCTTTGGGGAAGCCTGCTGTGACGGTACAGGTGATTaGCTGGCTGTTGCTGGCTGTACTGAGGCAGCCTTT +
Preference number: 6 (lower is better)
Translates to: FFGEACCDGTGD*LAVAGCTEAAF
Trigger: AAAGGCTGCCTCAGTACAGCCAGCAACAGCCAGCAAATCACCTGTACCGTCACAGCAGGCTTCCCCAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GGCAGAGTCTGTTTTCAAAGGAGGGGCCGTTGTCACTaGAGCCTGTGCCTGCACTTGAGAGCTCAGAATAGC +
Preference number: 6 (lower is better)
Translates to: GRVCFQRRGRCH*SLCLHLRAQNS
Trigger: GCTATTCTGAGCTCTCAAGTGCAGGCACAGGCTCAAGTGACAACGGCCCCTCCTTTGAAAACAGACTCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp ACCCGAATAGCTTCCCTGTCACAGTTTCTTGAGGAGTaGTGGGCTGTGATTTGGGGGCATCAGCGATACCCC +
Preference number: 6 (lower is better)
Translates to: TRIASLSQFLEE*WAVIWGHQRYP
Trigger: GGGGTATCGCTGATGCCCCCAAATCACAGCCCACAACTCCTCAAGAAACTGTGACAGGGAAGCTATTCGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GCCCTGGAACTTTCGTCTGCTGTTGGACTCAGAGGCTaGGGGTCAGACATTGAACGCTGCATCATCTTGGCT +
Preference number: 6 (lower is better)
Translates to: ALELSSAVGLRG*GSDIERCIILA
Trigger: AGCCAAGATGATGCAGCGTTCAATGTCTGACCCCAAGCCTCTGAGTCCAACAGCAGACGAAAGTTCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CTGCCGCCAGCTGCTTGGGATCCACGCCTGGAGACTTaGCCTTATCCACAACTTTTGGTGGCTCATGAAGTT +
Preference number: 6 (lower is better)
Translates to: LPPAAWDPRLET*PYPQLLVAHEV
Trigger: AACTTCATGAGCCACCAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGGATCCCAAGCAGCTGGCGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GAGCTTGCACAGGTTTGGCCTCTAAGTTTTCAGCTGCCGGGCCTTTaGTTTCCTTCTTCACAGCAGTCGTCTTGGCAGGTGCTGATGGGT +
Preference number: 6 (lower is better)
Translates to: ELAQVWPLSFQLPGL*FPSSQQSSWQVLMG
Trigger: ACCCATCAGCACCTGCCAAGACGACTGCTGTGAAGAAGGAAACAAAAGGCCCGGCAGCTGAAAACTTAGAGGCCAAACCTGTGCAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GTTGGACTCAGAGGCTTGGGGTCAGACATTGAACGCTGCATCATCTaGGCTGTCTTAGGGCTTGCCGGGGGAACTTTAGCCATATCTGGA +
Preference number: 6 (lower is better)
Translates to: VGLRGLGSDIERCII*AVLGLAGGTLAISG
Trigger: TCCAGATATGGCTAAAGTTCCCCCGGCAAGCCCTAAGACAGCCAAGATGATGCAGCGTTCAATGTCTGACCCCAAGCCTCTGAGTCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp CAGATATGGGCGGCAAAGGTCCAGCTGCAGCCCTGGCCATTCCCATaGGCTGGCCAACAGGACTTAGTGGACTTTCTTCTTCTGAATTCT +
Preference number: 6 (lower is better)
Translates to: QIWAAKVQLQPWPFP*AGQQDLVDFLLLNS
Trigger: AGAATTCAGAAGAAGAAAGTCCACTAAGTCCTGTTGGCCAGCCAATGGGAATGGCCAGGGCTGCAGCTGGACCTTTGCCGCCCATATCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp GATACAGAGTGTGGGGATCCAGGTTGCTCCTTAGTTTaGGAAGAAGGTGTTGGGGCCAACCCAGTCTCAGGT +
Preference number: 6 (lower is better)
Translates to: DTECGDPGCSLV*EEGVGANPVSG
Trigger: ACCTGAGACTGGGTTGGCCCCAACACCTTCTTCTCAAACTAAGGAGCAACCTGGATCCCCACACTCTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp AGTGAGCATGAGCCCCTTTCTCCACAACTGATGACATaGCCAGTGGGGACTGCTGGAGTGAGACTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: SEHEPLSPQLMT*PVGTAGVRLSA
Trigger: TGCAGAAAGTCTCACTCCAGCAGTCCCCACTGGTCATGTCATCAGTTGTGGAGAAAGGGGCTCATGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp TTGCAGTGCCTTCTGCCTGAGGCTGTGTTACGTCTCTaGTTTCCTTCTGTCTGTCCTTGGGTAACGTCTGAG +
Preference number: 6 (lower is better)
Translates to: LQCLLPEAVLRL*FPSVCPWVTSE
Trigger: CTCAGACGTTACCCAAGGACAGACAGAAGGAAAGCAGAGACGTAACACAGCCTCAGGCAGAAGGCACTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp ATCCCTATAACCAAAACGGTCTTCAGGAAGGGTAGTTaGAGGCTGCTGTGCTGTGCAGCTCCGTCCAAAAGG +
Preference number: 6 (lower is better)
Translates to: IPITKTVFRKGS*RLLCCAAPSKR
Trigger: CCTTTTGGACGGAGCTGCACAGCACAGCAGCCTGCAACTACCCTTCCTGAAGACCGTTTTGGTTATAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GGTCCAGGAGGTGGAGTCATTCTTGCTGTGGAATACTaGGGGGTACTAATCCCAACTCCCGAAATGACTTGG +
Preference number: 6 (lower is better)
Translates to: GPGGGVILAVEY*GVLIPTPEMTW
Trigger: CCAAGTCATTTCGGGAGTTGGGATTAGTACCCCGCAGTATTCCACAGCAAGAATGACTCCACCTCCTGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TGTTTTCTGTGTAGTCACTGGAATCTCAGGGACTGCTaGCTTGGGGGCAATTGGAGGTTTGCTTGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: CFLCSHWNLRDC*LGGNWRFACLW
Trigger: CCAGAGGCAAGCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGAGATTCCAGTGACTACACAGAAAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TTTGGGGGTGATCCCAAGGGCCAACTTGTAATGGCTTaGGCAGCAGAAGAATCTGTTGGAGTCCCAGGTTCA +
Preference number: 6 (lower is better)
Translates to: FGGDPKGQLVMA*AAEESVGVPGS
Trigger: TGAACCTGGGACTCCAACAGATTCTTCTGCTGCCCAAGCCATTACAAGTTGGCCCTTGGGATCACCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CAAAACACTTCCCACACCATACTGCGGTCCAGGAGGTaGAGTCATTCTTGCTGTGGAATACTGCGGGGTACT +
Preference number: 6 (lower is better)
Translates to: QNTSHTILRSRR*SHSCCGILRGT
Trigger: AGTACCCCGCAGTATTCCACAGCAAGAATGACTCCACCTCCTGGACCGCAGTATGGTGTGGGAAGTGTTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CAGAGGTATCTCCGAAACAGTGCTCAAGATGCCAGGTaGGGCAATGTACTGAGTCACACCGTCAGACTGAAC +
Preference number: 6 (lower is better)
Translates to: QRYLRNSAQDAR*GNVLSHTVRLN
Trigger: GTTCAGTCTGACGGTGTGACTCAGTACATTGCCCCACCTGGCATCTTGAGCACTGTTTCGGAGATACCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TATGAACTGGCTGAATTCAGTCTGAGGAGCTGTTCTTaGCCGCTCAATGCCGTGCTGGCTTTCTACTCGGCT +
Preference number: 6 (lower is better)
Translates to: YELAEFSLRSCS*PLNAVLAFYSA
Trigger: AGCCGAGTAGAAAGCCAGCACGGCATTGAGCGGCCAAGAACAGCTCCTCAGACTGAATTCAGCCAGTTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp ATGGCTTATCTGCTTCATCCTGTAGAGCCGACCGGATaGTATTTCCTAACGTGCCCAGTCCTGACCCAAGTG +
Preference number: 6 (lower is better)
Translates to: MAYLLHPVEPTG*YFLTCPVLTQV
Trigger: CACTTGGGTCAGGACTGGGCACGTTAGGAAATACCATCCGGTCGGCTCTACAGGATGAAGCAGATAAGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TTGAGTTTTAGCCTCCGTGTCTGCTGCTCCCATTCCTaGCTGTTTCACAGGGTCTTGGCCATTCTGTCCCAT +
Preference number: 6 (lower is better)
Translates to: LSFSLRVCCSHS*LFHRVLAILSH
Trigger: ATGGGACAGAATGGCCAAGACCCTGTGAAACAGCCAGGAATGGGAGCAGCAGACACGGAGGCTAAAACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS CAA 72 bp CTTTGGGGCTGTCCTGTTTGGATGGAAGTTCCTTCTTaGGGGAAGCCTGCTGTGACGGTACAGGTGATTTGC +
Preference number: 6 (lower is better)
Translates to: LWGCPVWMEVPS*GKPAVTVQVIC
Trigger: GCAAATCACCTGTACCGTCACAGCAGGCTTCCCCAAAGAAGGAACTTCCATCCAAACAGGACAGCCCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TCGGTTGCTTTGGTTCAACATCTGCAACAGGGGCCTTaGCTTGTTCAGGTAGGGCTGCAGAAGGCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: SVALVQHLQQGP*LVQVGLQKASW
Trigger: CCAAGAAGCCTTCTGCAGCCCTACCTGAACAAGCAAAGGCCCCTGTTGCAGATGTTGAACCAAAGCAACCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CAGGTTTGGCCTCTAAGTTTTCAGCTGCCGGGCCTTTaGTTTCCTTCTTCACAGCAGTCGTCTTGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: QVWPLSFQLPGL*FPSSQQSSWQV
Trigger: CACCTGCCAAGACGACTGCTGTGAAGAAGGAAACAAAAGGCCCGGCAGCTGAAAACTTAGAGGCCAAACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CGCGGACTTAGGTCATCGACCAGCTCAGGATTCTCTTaGTGCTCCTTCCTGGAAGGAAAACCTTGTGCGCTA +
Preference number: 6 (lower is better)
Translates to: RGLRSSTSSGFS*CSFLEGKPCAL
Trigger: TAGCGCACAAGGTTTTCCTTCCAGGAAGGAGCACAAAGAGAATCCTGAGCTGGTCGATGACCTAAGTCCGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TTCTGTGTAGTCACTGGAATCTCAGGGACTGCTGGCTaGGGGGCAATTGGAGGTTTGCTTGCCTCTGGTCTA +
Preference number: 6 (lower is better)
Translates to: FCVVTGISGTAG*GAIGGLLASGL
Trigger: TAGACCAGAGGCAAGCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGAGATTCCAGTGACTACACAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GAGGCTCTGGAGGAATTGGTATGGAAACACTCCTGGGAGCAACACTaGGGACTGCACTACTCACTGCAGAGACTTCGGGTTTTGAAGCTT +
Preference number: 6 (lower is better)
Translates to: EALEELVWKHSWEQH*GLHYSLQRLRVLKL
Trigger: AAGCTTCAAAACCCGAAGTCTCTGCAGTGAGTAGTGCAGTCCCAAGTGTTGCTCCCAGGAGTGTTTCCATACCAATTCCTCCAGAGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp AATAGTGGACGGGCTCCTTCCAGGCAGCTTCTGCTCTaGCCTAAACGTGTCCGTAGTTCTGCTTTTGCTAAG +
Preference number: 6 (lower is better)
Translates to: NSGRAPSRQLLL*PKRVRSSAFAK
Trigger: CTTAGCAAAAGCAGAACTACGGACACGTTTAGGTCAGAGCAGAAGCTGCCTGGAAGGAGCCCGTCCACTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp TTGCATTCTGTGCAGGTGTTGAAGTTGGGAGGATCCTaGGACCCTACGTTGAGTTCCGTTCTGCAGAGAGGA +
Preference number: 6 (lower is better)
Translates to: LHSVQVLKLGGS*DPTLSSVLQRG
Trigger: TCCTCTCTGCAGAACGGAACTCAACGTAGGGTCTCAGGATCCTCCCAACTTCAACACCTGCACAGAATGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp CCTGTGTCACTCAGGCCTTGTGGGCTCTTGGGTTGCTaGGAACTGGAAGTGTCTGATTTGTCCTCTTCCTTT +
Preference number: 6 (lower is better)
Translates to: PVSLRPCGLLGC*ELEVSDLSSSF
Trigger: AAAGGAAGAGGACAAATCAGACACTTCCAGTTCTCAGCAACCCAAGAGCCCACAAGGCCTGAGTGACACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp TGCTTTCGAATGAAGTCCTCGTCTTCCCCCGAGCCTTaGCTGTCTTCCTGCTTATACTCCTCGCTGCTTGAT +
Preference number: 6 (lower is better)
Translates to: CFRMKSSSSPEP*LSSCLYSSLLD
Trigger: ATCAAGCAGCGAGGAGTATAAGCAGGAAGACAGTCAAGGCTCGGGGGAAGACGAGGACTTCATTCGAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp GTTTGGGAACCTTTAGCCGTGAAGCCCTCGGAATACTaGAAAGGAGCCCTGGAACTTTCGTCTGCTGTTGGA +
Preference number: 6 (lower is better)
Translates to: VWEPLAVKPSEY*KGALELSSAVG
Trigger: TCCAACAGCAGACGAAAGTTCCAGGGCTCCTTTTCAGTATTCCGAGGGCTTCACGGCTAAAGGTTCCCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp GAAGTCTGCAAAGGCGCTAGGAAGTCTGTCACTTCTTaGGACCTCCGTGTCTCAGTGGTTCTAAGGAGACGA +
Preference number: 6 (lower is better)
Translates to: EVCKGARKSVTS*DLRVSVVLRRR
Trigger: TCGTCTCCTTAGAACCACTGAGACACGGAGGTCTCAAGAAGTGACAGACTTCCTAGCGCCTTTGCAGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp AAGCTAATAGTGGACGGGCTCCTTCCAGGCAGCTTCTaGTCTGACCTAAACGTGTCCGTAGTTCTGCTTTTG +
Preference number: 6 (lower is better)
Translates to: KLIVDGLLPGSF*SDLNVSVVLLL
Trigger: CAAAAGCAGAACTACGGACACGTTTAGGTCAGAGCAGAAGCTGCCTGGAAGGAGCCCGTCCACTATTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GATGGGCTATCTGTGAGTGTCTCTGTCGTCTTCGGTTaGTTTGGTTCAACATCTGCAACAGGGGCCTTTGCT +
Preference number: 6 (lower is better)
Translates to: DGLSVSVSVVFG*FGSTSATGAFA
Trigger: AGCAAAGGCCCCTGTTGCAGATGTTGAACCAAAGCAACCGAAGACGACAGAGACACTCACAGATAGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GGACTTAGGTCATCGACCAGCTCAGGATTCTCTTTGTaGTCCTTCCTGGAAGGAAAACCTTGTGCGCTATCC +
Preference number: 6 (lower is better)
Translates to: GLRSSTSSGFSL*SFLEGKPCALS
Trigger: GGATAGCGCACAAGGTTTTCCTTCCAGGAAGGAGCACAAAGAGAATCCTGAGCTGGTCGATGACCTAAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp ATGGGCCGTAACAATAGCAGTTGGAGCCACTGGAGCTaGAGCTGCCAACTTTCTTTTAGGATAAGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: MGRNNSSWSHWS*SCQLSFRISGW
Trigger: CCACCCACTTATCCTAAAAGAAAGTTGGCAGCTGCAGCTCCAGTGGCTCCAACTGCTATTGTTACGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp AGGGACTGCTGGCTTGGGGGCAATTGGAGGTTTGCTTaGCTCTGGTCTATGTGTAAATACAAGTCCAGTTGG +
Preference number: 6 (lower is better)
Translates to: RDCWLGGNWRFA*LWSMCKYKSSW
Trigger: CCAACTGGACTTGTATTTACACATAGACCAGAGGCAAGCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp TGTTGTTTTCTGTGTAGTCACTGGAATCTCAGGGACTaGTGGCTTGGGGGCAATTGGAGGTTTGCTTGCCTC +
Preference number: 6 (lower is better)
Translates to: CCFLCSHWNLRD*WLGGNWRFACL
Trigger: GAGGCAAGCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGAGATTCCAGTGACTACACAGAAAACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp ACTGCCCTCTGTAGCAACATACTGACCCTCCAAAATTaGCTGTTCAGTGGTGGTTTGTGGAGAAGCAGTCCC +
Preference number: 6 (lower is better)
Translates to: TALCSNILTLQN*LFSGGLWRSSP
Trigger: GGGACTGCTTCTCCACAAACCACCACTGAACAGGCAATTTTGGAGGGTCAGTATGTTGCTACAGAGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp GGTTGTTTGGGAACCTTTAGCCTTGGCATCCACCCGTaGTCGTATGGAAGGTGTTCTTATGGTTCCCAATGG +
Preference number: 6 (lower is better)
Translates to: GCLGTFSLGIHP*SYGRCSYGSQW
Trigger: CCATTGGGAACCATAAGAACACCTTCCATACGAGCACGGGTGGATGCCAAGGCTAAAGGTTCCCAAACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
CDS CCA 72 bp TACTGCGGGGTACTAATCCCAACTCCCGAAATGACTTaGCGTGTTTCTGGGTATGGGCCTGTAGTCTTGCTT +
Preference number: 6 (lower is better)
Translates to: YCGVLIPTPEMT*RVSGYGPVVLL
Trigger: AAGCAAGACTACAGGCCCATACCCAGAAACACGCCAAGTCATTTCGGGAGTTGGGATTAGTACCCCGCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp AAGGTGTTGGGCGTTTCTTGTCTTTGGGTGGAGATGTaGCACCCATATATGGAGGGCTCTGTGTGTCTGGAT +
Preference number: 6 (lower is better)
Translates to: KVLGVSCLWVEM*HPYMEGSVCLD
Trigger: ATCCAGACACACAGAGCCCTCCATATATGGGTGCCACATCTCCACCCAAAGACAAGAAACGCCCAACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TCGAATCCTCCTCTGCCTTCACATAGCTATGCAGTCTaGAGGAAGTCTGCAAAGGCGCTAGGAAGTCTGTCA +
Preference number: 6 (lower is better)
Translates to: SNPPLPSHSYAV*RKSAKALGSLS
Trigger: TGACAGACTTCCTAGCGCCTTTGCAGACTTCCTCCAGACTGCATAGCTATGTGAAGGCAGAGGAGGATTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp AGATGGGCTATCTGTGAGTGTCTCTGTCGTCTTCGGTaGCTTTGGTTCAACATCTGCAACAGGGGCCTTTGC +
Preference number: 6 (lower is better)
Translates to: RWAICECLCRLR*LWFNICNRGLC
Trigger: GCAAAGGCCCCTGTTGCAGATGTTGAACCAAAGCAACCGAAGACGACAGAGACACTCACAGATAGCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp ATACTGCGGGGTACTAATCCCAACTCCCGAAATGACTaGGCGTGTTTCTGGGTATGGGCCTGTAGTCTTGCT +
Preference number: 6 (lower is better)
Translates to: ILRGTNPNSRND*ACFWVWACSLA
Trigger: AGCAAGACTACAGGCCCATACCCAGAAACACGCCAAGTCATTTCGGGAGTTGGGATTAGTACCCCGCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CTGACGTTCCCACTCCAGTTCCTCAGCAAAGCGTTGTaGCTTAATTTTCTCCAGTTCCAGGAGCTCTCGCTC +
Preference number: 6 (lower is better)
Translates to: LTFPLQFLSKAL*LNFLQFQELSL
Trigger: GAGCGAGAGCTCCTGGAACTGGAGAAAATTAAGCAACAACGCTTTGCTGAGGAACTGGAGTGGGAACGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp CTCCTGACGTTCCCACTCCAGTTCCTCAGCAAAGCGTaGTTGCTTAATTTTCTCCAGTTCCAGGAGCTCTCG +
Preference number: 6 (lower is better)
Translates to: LLTFPLQFLSKA*LLNFLQFQELS
Trigger: CGAGAGCTCCTGGAACTGGAGAAAATTAAGCAACAACGCTTTGCTGAGGAACTGGAGTGGGAACGTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp TCTCATCATGAACTGGGCCTGCCGCTCTTCCTCTTGTaGATAGAGAAGGTGCTGCTTCATAGACTGCAGCTC +
Preference number: 6 (lower is better)
Translates to: SHHELGLPLFLL*IEKVLLHRLQL
Trigger: GAGCTGCAGTCTATGAAGCAGCACCTTCTCTATCAACAAGAGGAAGAGCGGCAGGCCCAGTTCATGATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp CTGTCTCATCATGAACTGGGCCTGCCGCTCTTCCTCTaGTTGATAGAGAAGGTGCTGCTTCATAGACTGCAG +
Preference number: 6 (lower is better)
Translates to: LSHHELGLPLFL*LIEKVLLHRLQ
Trigger: CTGCAGTCTATGAAGCAGCACCTTCTCTATCAACAAGAGGAAGAGCGGCAGGCCCAGTTCATGATGAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp CCTTTGAATCTCCTGACGTTCCCACTCCAGTTCCTCAGCAAAGCGTaGTTGCTTAATTTTCTCCAGTTCCAGGAGCTCTCGCTCCAAGTC +
Preference number: 6 (lower is better)
Translates to: PLNLLTFPLQFLSKA*LLNFLQFQELSLQV
Trigger: GACTTGGAGCGAGAGCTCCTGGAACTGGAGAAAATTAAGCAACAACGCTTTGCTGAGGAACTGGAGTGGGAACGTCAGGAGATTCAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GGCAATGTACTGAGTCACACCGTCAGACTGAACCGTGTACCATCCTaGGCTCTGTGGTATTTCAATGGCTACCACAGTAGACGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: GNVLSHTVRLNRVPS*ALWYFNGYHSRRCC
Trigger: ACAACAGCGTCTACTGTGGTAGCCATTGAAATACCACAGAGCCAAGGATGGTACACGGTTCAGTCTGACGGTGTGACTCAGTACATTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GGGTGGGAAGAGCGGGTGATGAGTACTGGTATTGTGTGTAAGGACTaGTCGGAGGAACTAGCTGAGCTTCTGTTTGTGTTTGTGGTGGTA +
Preference number: 6 (lower is better)
Translates to: GWEERVMSTGIVCKD*SEELAELLFVFVVV
Trigger: TACCACCACAAACACAAACAGAAGCTCAGCTAGTTCCTCCGACAAGTCCTTACACACAATACCAGTACTCATCACCCGCTCTTCCCACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GCTTCTGCTTTTGATCACAGAGGGCTTTGGGGACTGCTGGCTGTTTaGACTGGAGTGAGACTTGCCATGCTCAATGCTTTCAGTCTGTTC +
Preference number: 6 (lower is better)
Translates to: ASAFDHRGLWGLLAV*TGVRLAMLNAFSLF
Trigger: GAACAGACTGAAAGCATTGAGCATGGCAAGTCTCACTCCAGTCAAAACAGCCAGCAGTCCCCAAAGCCCTCTGTGATCAAAAGCAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp GCTTTGAGGTTGCTGCTGCTGAAGATGGGCTATCTGTaGGTGTCTCTGTCGTCTTCGGTTGCTTTGGTTCAA +
Preference number: 6 (lower is better)
Translates to: ALRLLLLKMGYL*VSLSSSVALVQ
Trigger: TTGAACCAAAGCAACCGAAGACGACAGAGACACTCACAGATAGCCCATCTTCAGCAGCAGCAACCTCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp AAATACCGTTTCAAGGGAAACCAGATCTTTTGGGGGTaGTCCCAAGGGCCAACTTGTAATGGCTTGGGCAGC +
Preference number: 6 (lower is better)
Translates to: KYRFKGNQIFWG*SQGPTCNGLGS
Trigger: GCTGCCCAAGCCATTACAAGTTGGCCCTTGGGATCACCCCCAAAAGATCTGGTTTCCCTTGAAACGGTATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp GTAACTGTTGTTGAGCTAGCGTCTCCTGTCTCATCATaGACTGGGCCTGCCGCTCTTCCTCTTGTTGATAGA +
Preference number: 6 (lower is better)
Translates to: VTVVELASPVSS*TGPAALPLVDR
Trigger: TCTATCAACAAGAGGAAGAGCGGCAGGCCCAGTTCATGATGAGACAGGAGACGCTAGCTCAACAACAGTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp TGCAGCTGTTGGATCTGCTCAAGTTGTAACTGTTGTTaGGCTAGCGTCTCCTGTCTCATCATGAACTGGGCC +
Preference number: 6 (lower is better)
Translates to: CSCWICSSCNCC*ASVSCLIMNWA
Trigger: GGCCCAGTTCATGATGAGACAGGAGACGCTAGCTCAACAACAGTTACAACTTGAGCAGATCCAACAGCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp CGTAACAATAGCAGTTGGAGCCACTGGAGCTGCAGCTaGCAACTTTCTTTTAGGATAAGTGGGTGGCTTAGG +
Preference number: 6 (lower is better)
Translates to: RNNSSWSHWSCS*QLSFRISGWLR
Trigger: CCTAAGCCACCCACTTATCCTAAAAGAAAGTTGGCAGCTGCAGCTCCAGTGGCTCCAACTGCTATTGTTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp CCATTAGATGACCTCAAAACACTTCCCACACCATACTaGGGTCCAGGAGGTGGAGTCATTCTTGCTGTGGAA +
Preference number: 6 (lower is better)
Translates to: PLDDLKTLPTPY*GPGGGVILAVE
Trigger: TTCCACAGCAAGAATGACTCCACCTCCTGGACCGCAGTATGGTGTGGGAAGTGTTTTGAGGTCATCTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GGCTGTTTTGACTGGAGTGAGACTTGCCATGCTCAATaGTTTCAGTCTGTTCTTTCAGCGGATACCACCGAG +
Preference number: 6 (lower is better)
Translates to: GCFDWSETCHAQ*FQSVLSADTTE
Trigger: CTCGGTGGTATCCGCTGAAAGAACAGACTGAAAGCATTGAGCATGGCAAGTCTCACTCCAGTCAAAACAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp TTGGGGACTGCTGGCTGTTTTGACTGGAGTGAGACTTaGCATGCTCAATGCTTTCAGTCTGTTCTTTCAGCG +
Preference number: 6 (lower is better)
Translates to: LGTAGCFDWSET*HAQCFQSVLSA
Trigger: CGCTGAAAGAACAGACTGAAAGCATTGAGCATGGCAAGTCTCACTCCAGTCAAAACAGCCAGCAGTCCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp GCTATCTGTGAGTGTCTCTGTCGTCTTCGGTTGCTTTaGTTCAACATCTGCAACAGGGGCCTTTGCTTGTTC +
Preference number: 6 (lower is better)
Translates to: AICECLCRLRLL*FNICNRGLCLF
Trigger: GAACAAGCAAAGGCCCCTGTTGCAGATGTTGAACCAAAGCAACCGAAGACGACAGAGACACTCACAGATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp AGGAATAGCATCAGCATGGGCCGTAACAATAGCAGTTaGAGCCACTGGAGCTGCAGCTGCCAACTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: RNSISMGRNNSS*SHWSCSCQLSF
Trigger: AAAAGAAAGTTGGCAGCTGCAGCTCCAGTGGCTCCAACTGCTATTGTTACGGCCCATGCTGATGCTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp AGGAATTGGTATGGAAACACTCCTGGGAGCAACACTTaGGACTGCACTACTCACTGCAGAGACTTCGGGTTT +
Preference number: 6 (lower is better)
Translates to: RNWYGNTPGSNT*DCTTHCRDFGF
Trigger: AAACCCGAAGTCTCTGCAGTGAGTAGTGCAGTCCCAAGTGTTGCTCCCAGGAGTGTTTCCATACCAATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CTGACCCTCCAAAATTGCCTGTTCAGTGGTGGTTTGTaGAGAAGCAGTCCCAGAGGGTTCGTAGTTATACTG +
Preference number: 6 (lower is better)
Translates to: LTLQNCLFSGGL*RSSPRGFVVIL
Trigger: CAGTATAACTACGAACCCTCTGGGACTGCTTCTCCACAAACCACCACTGAACAGGCAATTTTGGAGGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp ACCGTCAGACTGAACCGTGTACCATCCTTGGCTCTGTaGTATTTCAATGGCTACCACAGTAGACGCTGTTGT +
Preference number: 6 (lower is better)
Translates to: TVRLNRVPSLAL*YFNGYHSRRCC
Trigger: ACAACAGCGTCTACTGTGGTAGCCATTGAAATACCACAGAGCCAAGGATGGTACACGGTTCAGTCTGACGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TTTGAACTGCTACACTGGAGACTTTGGAAGGGGGTTTaGTCTTGTCACCCTCTGCCGTGCTATCTCCGTATT +
Preference number: 6 (lower is better)
Translates to: FELLHWRLWKGV*SCHPLPCYLRI
Trigger: AATACGGAGATAGCACGGCAGAGGGTGACAAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAGCAGTTCAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TGGCATCCACCCGTGCTCGTATGGAAGGTGTTCTTATaGTTCCCAATGGCTCAGTTTGCACAGATATCTCTG +
Preference number: 6 (lower is better)
Translates to: WHPPVLVWKVFL*FPMAQFAQISL
Trigger: CAGAGATATCTGTGCAAACTGAGCCATTGGGAACCATAAGAACACCTTCCATACGAGCACGGGTGGATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TTAGGGCTTGCCGGGGGAACTTTAGCCATATCTGGATaGAGTACTTTCTGTGGACTTATGTCATCAGGGAGG +
Preference number: 6 (lower is better)
Translates to: LGLAGGTLAISG*STFCGLMSSGR
Trigger: CCTCCCTGATGACATAAGTCCACAGAAAGTACTCCATCCAGATATGGCTAAAGTTCCCCCGGCAAGCCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TCTCTTTCCACGAGGTCAAGCTCTCGGTCTATGTCCTaGAGAATTTTGGCTCGAGCCATGGTATTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: SLSTRSSSRSMS*RILARAMVLVL
Trigger: CAGAACCAATACCATGGCTCGAGCCAAAATTCTCCAGGACATAGACCGAGAGCTTGACCTCGTGGAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp TTGAACTACCAGGACTACTGTGGGATTTCTCAATGGTaGGAACCTGCATATCCTTGGATGGGTCGGGGAAGA +
Preference number: 6 (lower is better)
Translates to: LNYQDYCGISQW*EPAYPWMGRGR
Trigger: TCTTCCCCGACCCATCCAAGGATATGCAGGTTCCCACCATTGAGAAATCCCACAGTAGTCCTGGTAGTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp ACCAATCCGTTTCCTCCCGACGCAAGTGATAGGCTTTaGGGACCAAGGAAACATCATACATTGCAACCGCAA +
Preference number: 6 (lower is better)
Translates to: TNPFPPDASDRL*GPRKHHTLQPQ
Trigger: TTGCGGTTGCAATGTATGATGTTTCCTTGGTCCCCAAAGCCTATCACTTGCGTCGGGAGGAAACGGATTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
CDS CAA 72 bp TTCTCTGCCTTCTTCACTGTTGGAGCTTGCACAGGTTaGGCCTCTAAGTTTTCAGCTGCCGGGCCTTTTGTT +
Preference number: 6 (lower is better)
Translates to: FSAFFTVGACTG*ASKFSAAGPFV
Trigger: AACAAAAGGCCCGGCAGCTGAAAACTTAGAGGCCAAACCTGTGCAAGCTCCAACAGTGAAGAAGGCAGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GGGGATGCTTTGGGTCCTGAGGATGCAGGTGGCATTTaGTCCATATCTCCAAGTTGTCCTGATATTGCTCTC +
Preference number: 6 (lower is better)
Translates to: GDALGPEDAGGI*SISPSCPDIAL
Trigger: GAGAGCAATATCAGGACAACTTGGAGATATGGACAAAATGCCACCTGCATCCTCAGGACCCAAAGCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CAAGATCTCTCCAGATACAGAGTGTGGGGATCCAGGTaGCTCCTTAGTTTGAGAAGAAGGTGTTGGGGCCAA +
Preference number: 6 (lower is better)
Translates to: QDLSRYRVWGSR*LLSLRRRCWGQ
Trigger: TTGGCCCCAACACCTTCTTCTCAAACTAAGGAGCAACCTGGATCCCCACACTCTGTATCTGGAGAGATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp ATCTCAGGGACTGCTGGCTTGGGGGCAATTGGAGGTTaGCTTGCCTCTGGTCTATGTGTAAATACAAGTCCA +
Preference number: 6 (lower is better)
Translates to: ISGTAGLGAIGG*LASGLCVNTSP
Trigger: TGGACTTGTATTTACACATAGACCAGAGGCAAGCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CTGAGTCACACCGTCAGACTGAACCGTGTACCATCCTaGGCTCTGTGGTATTTCAATGGCTACCACAGTAGA +
Preference number: 6 (lower is better)
Translates to: LSHTVRLNRVPS*ALWYFNGYHSR
Trigger: TCTACTGTGGTAGCCATTGAAATACCACAGAGCCAAGGATGGTACACGGTTCAGTCTGACGGTGTGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp TGCGGGATCACTTCCTTCCCTGGTCCTTGCTGTTTAGGGATCAACTaGGGTGATGGTTGCTGTAAGGAAGGTTTTGTGATTCCTTCCGAT +
Preference number: 6 (lower is better)
Translates to: CGITSFPGPCCLGIN*GDGCCKEGFVIPSD
Trigger: ATCGGAAGGAATCACAAAACCTTCCTTACAGCAACCATCACCCAAGTTGATCCCTAAACAGCAAGGACCAGGGAAGGAAGTGATCCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp CTCAGTCAGGTGGGGCGTTGGGTTAAATCCACAGAGATTGCAAACTaGATTCTTGCATTCTGTGCAGGTGTTGAAGTTGGGAGGATCCTG +
Preference number: 6 (lower is better)
Translates to: LSQVGRWVKSTEIAN*ILAFCAGVEVGRIL
Trigger: CAGGATCCTCCCAACTTCAACACCTGCACAGAATGCAAGAATCAAGTTTGCAATCTCTGTGGATTTAACCCAACGCCCCACCTGACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GTCATCCCCCATGGTAGTCTGTATGAGGCTGGATCCATCTGTTACTaGCATCTGTTGCCGCTTCATGAGTTCTTCATAAGCAGCATCTGC +
Preference number: 6 (lower is better)
Translates to: VIPHGSLYEAGSICY*HLLPLHEFFISSIC
Trigger: GCAGATGCTGCTTATGAAGAACTCATGAAGCGGCAACAGATGCAAGTAACAGATGGATCCAGCCTCATACAGACTACCATGGGGGATGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GTCACTGGAATCTCAGGGACTGCTGGCTTGGGGGCAATTGGAGGTTaGCTTGCCTCTGGTCTATGTGTAAATACAAGTCCAGTTGGAATT +
Preference number: 6 (lower is better)
Translates to: VTGISGTAGLGAIGG*LASGLCVNTSPVGI
Trigger: AATTCCAACTGGACTTGTATTTACACATAGACCAGAGGCAAGCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGAGATTCCAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp TTGAATCTCCTGACGTTCCCACTCCAGTTCCTCAGCAAAGCGTTGTaGCTTAATTTTCTCCAGTTCCAGGAGCTCTCGCTCCAAGTCAAG +
Preference number: 6 (lower is better)
Translates to: LNLLTFPLQFLSKAL*LNFLQFQELSLQVK
Trigger: CTTGACTTGGAGCGAGAGCTCCTGGAACTGGAGAAAATTAAGCAACAACGCTTTGCTGAGGAACTGGAGTGGGAACGTCAGGAGATTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp CCGTGCTCGTATGGAAGGTGTTCTTATGGTTCCCAATGGCTCAGTTaGCACAGATATCTCTGCGACTGTTTGAACTGCTACACTGGAGAC +
Preference number: 6 (lower is better)
Translates to: PCSYGRCSYGSQWLS*HRYLCDCLNCYTGD
Trigger: GTCTCCAGTGTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGAACCATAAGAACACCTTCCATACGAGCACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GGTCTGCCCGAAGGTGAGAAGAAGAGTAACCAATCTCTAAAGGTGTaGGGCGTTTCTTGTCTTTGGGTGGAGATGTGGCACCCATATATG +
Preference number: 6 (lower is better)
Translates to: GLPEGEKKSNQSLKV*GVSCLWVEMWHPYM
Trigger: CATATATGGGTGCCACATCTCCACCCAAAGACAAGAAACGCCCAACACCTTTAGAGATTGGTTACTCTTCTTCTCACCTTCGGGCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp AGGTGTGTCAGAAGGTGGGACAGACGTAGCACTCTCTaGAGGCTCAGAGTAGGTCAATATCAGAGATTCATG +
Preference number: 6 (lower is better)
Translates to: RCVRRWDRRSTL*RLRVGQYQRFM
Trigger: CATGAATCTCTGATATTGACCTACTCTGAGCCTTCAGAGAGTGCTACGTCTGTCCCACCTTCTGACACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp TTGGCGTGTTTCTGGGTATGGGCCTGTAGTCTTGCTTaGATAATCCATTACCTCACCTGTAGACACTCTCCC +
Preference number: 6 (lower is better)
Translates to: LACFWVWACSLA*IIHYLTCRHSP
Trigger: GGGAGAGTGTCTACAGGTGAGGTAATGGATTATTCAAGCAAGACTACAGGCCCATACCCAGAAACACGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp GTACTGTACTTTCCAACTTCGCTAAGTCTGAGGGGCTaGAAGGGCTGCTTTCTTGCGAGAACGAGTCTTTTT +
Preference number: 6 (lower is better)
Translates to: VLYFPTSLSLRG*KGCFLARTSLF
Trigger: AAAAAGACTCGTTCTCGCAAGAAAGCAGCCCTTCCAGCCCCTCAGACTTAGCGAAGTTGGAAAGTACAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CCGTGCTCGTATGGAAGGTGTTCTTATGGTTCCCAATaGCTCAGTTTGCACAGATATCTCTGCGACTGTTTG +
Preference number: 6 (lower is better)
Translates to: PCSYGRCSYGSQ*LSLHRYLCDCL
Trigger: CAAACAGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGAACCATAAGAACACCTTCCATACGAGCACGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp AACCAATCTCTAAAGGTGTTGGGCGTTTCTTGTCTTTaGGTGGAGATGTGGCACCCATATATGGAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: NQSLKVLGVSCL*VEMWHPYMEGS
Trigger: AGAGCCCTCCATATATGGGTGCCACATCTCCACCCAAAGACAAGAAACGCCCAACACCTTTAGAGATTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TGTCTTAGGGCTTGCCGGGGGAACTTTAGCCATATCTaGATGGAGTACTTTCTGTGGACTTATGTCATCAGG +
Preference number: 6 (lower is better)
Translates to: CLRACRGNFSHI*MEYFLWTYVIR
Trigger: CCTGATGACATAAGTCCACAGAAAGTACTCCATCCAGATATGGCTAAAGTTCCCCCGGCAAGCCCTAAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CACGCCTGGAGACTTTGCCTTATCCACAACTTTTGGTaGCTCATGAAGTTCCAGATGCTGTGGATTTTCCGA +
Preference number: 6 (lower is better)
Translates to: HAWRLCLIHNFW*LMKFQMLWIFR
Trigger: TCGGAAAATCCACAGCATCTGGAACTTCATGAGCCACCAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp TCTGTTGTTTTCTGTGTAGTCACTGGAATCTCAGGGACTGCTGGCTaGGGGGCAATTGGAGGTTTGCTTGCCTCTGGTCTATGTGTAAAT +
Preference number: 6 (lower is better)
Translates to: SVVFCVVTGISGTAG*GAIGGLLASGLCVN
Trigger: ATTTACACATAGACCAGAGGCAAGCAAACCTCCAATTGCCCCCAAGCCAGCAGTCCCTGAGATTCCAGTGACTACACAGAAAACAACAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp TCCAGTTCCAGGAGCTCTCGCTCCAAGTCAAGTTGCTGTTGTTGTTaGTCTTCATCAGGGACAATCAAAAGAGTGCTTTCCTCTCCAACC +
Preference number: 6 (lower is better)
Translates to: SSSRSSRSKSSCCCC*SSSGTIKRVLSSPT
Trigger: GGTTGGAGAGGAAAGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCTGGAACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp AGTCCCAGAGGGTTCGTAGTTATACTGGTAGATCTGGCGAAGTTTTaGTTCCTCAAGCTGCTGATGGAGCTGTTGTTGCAGCTGTTGGAT +
Preference number: 6 (lower is better)
Translates to: SPRGFVVILVDLAKF*FLKLLMELLLQLLD
Trigger: ATCCAACAGCTGCAACAACAGCTCCATCAGCAGCTTGAGGAACAAAAACTTCGCCAGATCTACCAGTATAACTACGAACCCTCTGGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp TCTCTTTCCACGAGGTCAAGCTCTCGGTCTATGTCCTGGAGAATTTaGGCTCGAGCCATGGTATTGGTTCTGCACATTCTTCTCCTAGAA +
Preference number: 6 (lower is better)
Translates to: SLSTRSSSRSMSWRI*ARAMVLVLHILLLE
Trigger: TTCTAGGAGAAGAATGTGCAGAACCAATACCATGGCTCGAGCCAAAATTCTCCAGGACATAGACCGAGAGCTTGACCTCGTGGAAAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp TGCGAGATGGTCCATGAGATCGGAGATGGCCTTCAGATGATGATTTaGAACTACCAGGACTACTGTGGGATTTCTCAATGGTGGGAACCT +
Preference number: 6 (lower is better)
Translates to: CEMVHEIGDGLQMMI*NYQDYCGISQWWEP
Trigger: AGGTTCCCACCATTGAGAAATCCCACAGTAGTCCTGGTAGTTCAAAATCATCATCTGAAGGCCATCTCCGATCTCATGGACCATCTCGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GGAAGCTGCACTGAGGTTTATGATAGAAGGTTGGACAGCACTAATTaGTCGCCTGTAAACCTCATTCGCTGTGGTCTGCCTTTTCACATC +
Preference number: 6 (lower is better)
Translates to: GSCTEVYDRRLDSTN*SPVNLIRCGLPFHI
Trigger: GATGTGAAAAGGCAGACCACAGCGAATGAGGTTTACAGGCGACAAATTAGTGCTGTCCAACCTTCTATCATAAACCTCAGTGCAGCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp TTTCTCCAGTTCCAGGAGCTCTCGCTCCAAGTCAAGTTGCTGTTGTaGTTTGTCTTCATCAGGGACAATCAAAAGAGTGCTTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: FLQFQELSLQVKLLL*FVFIRDNQKSAFLS
Trigger: GGAGAGGAAAGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCTGGAACTGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp TGTAGCAACATACTGACCCTCCAAAATTGCCTGTTCAGTGGTGGTTaGTGGAGAAGCAGTCCCAGAGGGTTCGTAGTTATACTGGTAGAT +
Preference number: 6 (lower is better)
Translates to: CSNILTLQNCLFSGG*WRSSPRGFVVILVD
Trigger: ATCTACCAGTATAACTACGAACCCTCTGGGACTGCTTCTCCACAAACCACCACTGAACAGGCAATTTTGGAGGGTCAGTATGTTGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp TTCCTCCCGACGCAAGTGATAGGCTTCACTGTCAGACATAGCATGTaGGAAGTCATCCATGATGAATGCTATATCACGGTCATAACCCCT +
Preference number: 6 (lower is better)
Translates to: FLPTQVIGFTVRHSM*EVIHDECYITVITP
Trigger: AGGGGTTATGACCGTGATATAGCATTCATCATGGATGACTTCCAACATGCTATGTCTGACAGTGAAGCCTATCACTTGCGTCGGGAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp ACTTTGCCTATGGGTCCTTCTTCGGGAATTTGTACGTaGGCTTTAAGTAGATCACGTTTCTCCTCCCCCTCT +
Preference number: 6 (lower is better)
Translates to: TLPMGPSSGICT*ALSRSRFSSPS
Trigger: AGAGGGGGAGGAGAAACGTGATCTACTTAAAGCTCACGTACAAATTCCCGAAGAAGGACCCATAGGCAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp TTCTGGCTCTCAGTAACACCACCAATCTCTTTGAGCTaGCTCCTGATGAACTCTTCATCCTCAGAGCCTGAA +
Preference number: 6 (lower is better)
Translates to: FWLSVTPPISLS*LLMNSSSSEPE
Trigger: TTCAGGCTCTGAGGATGAAGAGTTCATCAGGAGTCAGCTCAAAGAGATTGGTGGTGTTACTGAGAGCCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp TTTCTCCTGGACCTAGAAGGCATATCCCACTCATCCTaGTCTTCGTCATCAGTTTGGACACTGGTATCAACG +
Preference number: 6 (lower is better)
Translates to: FLLDLEGISHSS*SSSSVWTLVST
Trigger: CGTTGATACCAGTGTCCAAACTGATGACGAAGATCAGGATGAGTGGGATATGCCTTCTAGGTCCAGGAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp GGCCACAGCTTGGAAGGTTGGTTGAGTCTGATAAGGTaGCACTTGCTGATGGTACAATGTCTGCTGTTGAAA +
Preference number: 6 (lower is better)
Translates to: GHSLEGWLSLIR*HLLMVQCLLLK
Trigger: TTTCAACAGCAGACATTGTACCATCAGCAAGTGTCACCTTATCAGACTCAACCAACCTTCCAAGCTGTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp GGAGACTTTGCCTTATCCACAACTTTTGGTGGCTCATaGAGTTCCAGATGCTGTGGATTTTCCGAGTCTGAC +
Preference number: 6 (lower is better)
Translates to: GDFALSTTFGGS*SSRCCGFSESD
Trigger: GTCAGACTCGGAAAATCCACAGCATCTGGAACTTCATGAGCCACCAAAAGTTGTGGATAAGGCAAAGTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp CTCAGTTTGCACAGATATCTCTGCGACTGTTTGAACTaGTACACTGGAGACTTTGGAAGGGGGTTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: LSLHRYLCDCLN*YTGDFGRGFGL
Trigger: AAGACCAAACCCCCTTCCAAAGTCTCCAGTGTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAAACTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp CCTCCTTCTTCTGAACTGGATCCTTGCTCTCAGAAGTaGGCCCAGGATGTGAAACAATTTTTGAGTCTGATG +
Preference number: 6 (lower is better)
Translates to: PPSSELDPCSQK*AQDVKQFLSLM
Trigger: CATCAGACTCAAAAATTGTTTCACATCCTGGGCCCACTTCTGAGAGCAAGGATCCAGTTCAGAAGAAGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TCATCAAAAGTTTCGTCATCTTCATCATGCCAGGAATaGCGTCTCCCAGCATCATCGTCGAAGCTGGTACTA +
Preference number: 6 (lower is better)
Translates to: SSKVSSSSSCQE*RLPASSSKLVL
Trigger: TAGTACCAGCTTCGACGATGATGCTGGGAGACGCCATTCCTGGCATGATGAAGATGACGAAACTTTTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp CCTCCTCCTCCAGCAACAACTAGTTCCTCACTCTCCTaGCTTTTAGTTTCTCGGAATTTGAGTTCAGGACTT +
Preference number: 6 (lower is better)
Translates to: PPPPATTSSSLS*LLVSRNLSSGL
Trigger: AAGTCCTGAACTCAAATTCCGAGAAACTAAAAGCCAGGAGAGTGAGGAACTAGTTGTTGCTGGAGGAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TTTCTTGTCTTTGGGTGGAGATGTGGCACCCATATATaGAGGGCTCTGTGTGTCTGGATCTGTTTCTGTTTG +
Preference number: 6 (lower is better)
Translates to: FLVFGWRCGTHI*RALCVWICFCL
Trigger: CAAACAGAAACAGATCCAGACACACAGAGCCCTCCATATATGGGTGCCACATCTCCACCCAAAGACAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TCCTTCCGATTTCCCTTGGTCCTTCTGAGCAACTTTTaGTTTCTTTGTAGTTTCCTCCTGGACTGCCTCGGA +
Preference number: 6 (lower is better)
Translates to: SFRFPLVLLSNF*FLCSFLLDCLG
Trigger: TCCGAGGCAGTCCAGGAGGAAACTACAAAGAAACAAAAAGTTGCTCAGAAGGACCAAGGGAAATCGGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TACTGGCTTTGTATCTGGTTTAGGGGTCACCTTGGTTaGTGCTTTCTTAGGCTCCTCCTTCTTCTGAACTGG +
Preference number: 6 (lower is better)
Translates to: YWLCIWFRGHLG*CFLRLLLLLNW
Trigger: CCAGTTCAGAAGAAGGAGGAGCCTAAGAAAGCACAAACCAAGGTGACCCCTAAACCAGATACAAAGCCAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CTGTATGAGGCTGGATCCATCTGTTACTTGCATCTGTaGCCGCTTCATGAGTTCTTCATAAGCAGCATCTGC +
Preference number: 6 (lower is better)
Translates to: LYEAGSICYLHL*PLHEFFISSIC
Trigger: GCAGATGCTGCTTATGAAGAACTCATGAAGCGGCAACAGATGCAAGTAACAGATGGATCCAGCCTCATACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GGGTTCGTAGTTATACTGGTAGATCTGGCGAAGTTTTaGTTCCTCAAGCTGCTGATGGAGCTGTTGTTGCAG +
Preference number: 6 (lower is better)
Translates to: GFVVILVDLAKF*FLKLLMELLLQ
Trigger: CTGCAACAACAGCTCCATCAGCAGCTTGAGGAACAAAAACTTCGCCAGATCTACCAGTATAACTACGAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp ATACTGACCCTCCAAAATTGCCTGTTCAGTGGTGGTTaGTGGAGAAGCAGTCCCAGAGGGTTCGTAGTTATA +
Preference number: 6 (lower is better)
Translates to: ILTLQNCLFSGG*WRSSPRGFVVI
Trigger: TATAACTACGAACCCTCTGGGACTGCTTCTCCACAAACCACCACTGAACAGGCAATTTTGGAGGGTCAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp CAATGGCTCAGTTTGCACAGATATCTCTGCGACTGTTaGAACTGCTACACTGGAGACTTTGGAAGGGGGTTT +
Preference number: 6 (lower is better)
Translates to: QWLSLHRYLCDC*NCYTGDFGRGF
Trigger: AAACCCCCTTCCAAAGTCTCCAGTGTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAAACTGAGCCATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp GAAGGTGAGAAGAAGAGTAACCAATCTCTAAAGGTGTaGGGCGTTTCTTGTCTTTGGGTGGAGATGTGGCAC +
Preference number: 6 (lower is better)
Translates to: EGEKKSNQSLKV*GVSCLWVEMWH
Trigger: GTGCCACATCTCCACCCAAAGACAAGAAACGCCCAACACCTTTAGAGATTGGTTACTCTTCTTCTCACCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GATCCACGCCTGGAGACTTTGCCTTATCCACAACTTTaGGTGGCTCATGAAGTTCCAGATGCTGTGGATTTT +
Preference number: 6 (lower is better)
Translates to: DPRLETLPYPQL*VAHEVPDAVDF
Trigger: AAAATCCACAGCATCTGGAACTTCATGAGCCACCAAAAGTTGTGGATAAGGCAAAGTCTCCAGGCGTGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp TGGCCTGCAGGACTTAGGCTGAATCTAAAGGTTTCATaGAAGGAAGGCTCTCGATCATGTCGACATACCCTT +
Preference number: 6 (lower is better)
Translates to: WPAGLRLNLKVS*KEGSRSCRHTL
Trigger: AAGGGTATGTCGACATGATCGAGAGCCTTCCTTCAATGAAACCTTTAGATTCAGCCTAAGTCCTGCAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030691.17
CDS TCA 72 bp GAATGGCCAAAAGAGACATCCAGAGCTTCAGCCTCTTaGGCTTTCAATCTTAGTGATGAGCTGGAAGAATCC +
Preference number: 6 (lower is better)
Translates to: EWPKETSRASAS*AFNLSDELEES
Trigger: GGATTCTTCCAGCTCATCACTAAGATTGAAAGCTCAAGAGGCTGAAGCTCTGGATGTCTCTTTTGGCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp GATGAATGCTATATCACGGTCATAACCCCTTGTCCGTaGCTCTTCTCTCATGTGTTGCTGAACTTCAGGCAA +
Preference number: 6 (lower is better)
Translates to: DECYITVITPCP*LFSHVLLNFRQ
Trigger: TTGCCTGAAGTTCAGCAACACATGAGAGAAGAGTCACGGACAAGGGGTTATGACCGTGATATAGCATTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp TTCTCTTGTACTCAACACTTGCATTCTGGACAACCATaGCTTGACCTCGTCCTGGAAGTAGGTACACCTTCA +
Preference number: 6 (lower is better)
Translates to: FSCTQHLHSGQP*LDLVLEVGTPS
Trigger: TGAAGGTGTACCTACTTCCAGGACGAGGTCAAGTCATGGTTGTCCAGAATGCAAGTGTTGAGTACAAGAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp GGTCCTTGCTGTTTAGGGATCAACTTGGGTGATGGTTaGTGTAAGGAAGGTTTTGTGATTCCTTCCGATTTC +
Preference number: 6 (lower is better)
Translates to: GPCCLGINLGDG*CKEGFVIPSDF
Trigger: GAAATCGGAAGGAATCACAAAACCTTCCTTACAGCAACCATCACCCAAGTTGATCCCTAAACAGCAAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp TTCTCCAGTTCCAGGAGCTCTCGCTCCAAGTCAAGTTaGTGTTGTTGTTTGTCTTCATCAGGGACAATCAAA +
Preference number: 6 (lower is better)
Translates to: FSSSRSSRSKSS*CCCLSSSGTIK
Trigger: TTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCTGGAACTGGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp GTGATAGGCTTTGGGGACCAAGGAAACATCATACATTaGAACCGCAACTTCACTGTCAGACATAGCATGTTG +
Preference number: 6 (lower is better)
Translates to: VIGFGDQGNIIH*NRNFTVRHSML
Trigger: CAACATGCTATGTCTGACAGTGAAGTTGCGGTTGCAATGTATGATGTTTCCTTGGTCCCCAAAGCCTATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
CDS CAA 72 bp ACTTCCTTCCCTGGTCCTTGCTGTTTAGGGATCAACTaGGGTGATGGTTGCTGTAAGGAAGGTTTTGTGATT +
Preference number: 6 (lower is better)
Translates to: TSFPGPCCLGIN*GDGCCKEGFVI
Trigger: AATCACAAAACCTTCCTTACAGCAACCATCACCCAAGTTGATCCCTAAACAGCAAGGACCAGGGAAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TTTTTGCTCTCTTCCTCTCTGCTGCATAAATCCATTTaGTTCATCTTGCCTGGTGAGCAGGCTGCCATCTAC +
Preference number: 6 (lower is better)
Translates to: FLLSSSLLHKSI*FILPGEQAAIY
Trigger: GTAGATGGCAGCCTGCTCACCAGGCAAGATGAACAAAATGGATTTATGCAGCAGAGAGGAAGAGAGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CATGGTAGTCTGTATGAGGCTGGATCCATCTGTTACTaGCATCTGTTGCCGCTTCATGAGTTCTTCATAAGC +
Preference number: 6 (lower is better)
Translates to: HGSLYEAGSICY*HLLPLHEFFIS
Trigger: GCTTATGAAGAACTCATGAAGCGGCAACAGATGCAAGTAACAGATGGATCCAGCCTCATACAGACTACCATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp ACTGAGGTTTATGATAGAAGGTTGGACAGCACTAATTaGTCGCCTGTAAACCTCATTCGCTGTGGTCTGCCT +
Preference number: 6 (lower is better)
Translates to: TEVYDRRLDSTN*SPVNLIRCGLP
Trigger: AGGCAGACCACAGCGAATGAGGTTTACAGGCGACAAATTAGTGCTGTCCAACCTTCTATCATAAACCTCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp AGGAGCTCTCGCTCCAAGTCAAGTTGCTGTTGTTGTTaGTCTTCATCAGGGACAATCAAAAGAGTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: RSSRSKSSCCCC*SSSGTIKRVLS
Trigger: GGAAAGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp TTCCAGGAGCTCTCGCTCCAAGTCAAGTTGCTGTTGTaGTTTGTCTTCATCAGGGACAATCAAAAGAGTGCT +
Preference number: 6 (lower is better)
Translates to: FQELSLQVKLLL*FVFIRDNQKSA
Trigger: AGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp CAGTTCCAGGAGCTCTCGCTCCAAGTCAAGTTGCTGTaGTTGTTTGTCTTCATCAGGGACAATCAAAAGAGT +
Preference number: 6 (lower is better)
Translates to: QFQELSLQVKLL*LFVFIRDNQKS
Trigger: ACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCTGGAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp CTTTTGAACCATGATCTTTTCTTGTTCTCGGAACCTTaGAATCTCCTGACGTTCCCACTCCAGTTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: LLNHDLFLFSEP*NLLTFPLQFLS
Trigger: GCTGAGGAACTGGAGTGGGAACGTCAGGAGATTCAAAGGTTCCGAGAACAAGAAAAGATCATGGTTCAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp CTCCGTGTCTCAGTGGTTCTAAGGAGACGATCTGTTTaGGACAGATCCTTTTCATGGAGACTAAATGCAGAG +
Preference number: 6 (lower is better)
Translates to: LRVSVVLRRRSV*DRSFSWRLNAE
Trigger: CTCTGCATTTAGTCTCCATGAAAAGGATCTGTCCAAAACAGATCGTCTCCTTAGAACCACTGAGACACGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp AATTTTCTCCAGTTCCAGGAGCTCTCGCTCCAAGTCAAGTTGCTGTaGTTGTTTGTCTTCATCAGGGACAATCAAAAGAGTGCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: NFLQFQELSLQVKLL*LFVFIRDNQKSAFL
Trigger: GAGGAAAGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCTGGAACTGGAGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GGACCTAGAAGGCATATCCCACTCATCCTGATCTTCGTCATCAGTTaGGACACTGGTATCAACGCTCTTTTTAGTTCTTCTTCTCCTACT +
Preference number: 6 (lower is better)
Translates to: GPRRHIPLILIFVIS*DTGINALFSSSSPT
Trigger: AGTAGGAGAAGAAGAACTAAAAAGAGCGTTGATACCAGTGTCCAAACTGATGACGAAGATCAGGATGAGTGGGATATGCCTTCTAGGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GGTGGTCAATGTCTGCATAGAAGGAGTCTGCAGATATGCTTGATATaGGACTGCTTGCCATACTGCTTCTTTCCTCCAAACCTATTCTCA +
Preference number: 6 (lower is better)
Translates to: GGQCLHRRSLQICLI*DCLPYCFFPPNLFS
Trigger: TGAGAATAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATGCAGACATTGACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp CAGTTTAAACAGAGCCACTCTTTGATCTCAGTTAAGTaGGGATTGGGGTTAAAACCACAGAGGCTACACACG +
Preference number: 6 (lower is better)
Translates to: QFKQSHSLISVK*GLGLKPQRLHT
Trigger: CGTGTGTAGCCTCTGTGGTTTTAACCCCAATCCTCACTTAACTGAGATCAAAGAGTGGCTCTGTTTAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp CACATAAGTCTCCATGAGAGACTTAGAATATCTCGGTaGGGATTTATTCGAGTGTGGGGAAAGTGGAGAGGT +
Preference number: 6 (lower is better)
Translates to: HISLHERLRISR*GFIRVWGKWRG
Trigger: ACCTCTCCACTTTCCCCACACTCGAATAAATCCTCACCGAGATATTCTAAGTCTCTCATGGAGACTTATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp GTCAATGTCTGCATAGAAGGAGTCTGCAGATATGCTTaGTATTGGACTGCTTGCCATACTGCTTCTTTCCTC +
Preference number: 6 (lower is better)
Translates to: VNVCIEGVCRYA*YWTACHTASFL
Trigger: GAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATGCAGACATTGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp CCATTCCAAAACTTGCATCCCTTCTATAAGTTTCCCTaGGTGTTCTGCACTTCCACCAGGAAGAATCTTAGC +
Preference number: 6 (lower is better)
Translates to: PFQNLHPFYKFP*VFCTSTRKNLS
Trigger: GCTAAGATTCTTCCTGGTGGAAGTGCAGAACACTCAGGGAAACTTATAGAAGGGATGCAAGTTTTGGAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp TTGTACTCAACACTTGCATTCTGGACAACCATGACTTaGCCTCGTCCTGGAAGTAGGTACACCTTCACAAAT +
Preference number: 6 (lower is better)
Translates to: LYSTLAFWTTMT*PRPGSRYTFTN
Trigger: ATTTGTGAAGGTGTACCTACTTCCAGGACGAGGTCAAGTCATGGTTGTCCAGAATGCAAGTGTTGAGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS TCA 72 bp TCTTTCAGCGGATACCACCGAGGAGTGTTGTCCAGATaGGATGTGCTAGATAAATCAATCAATACCTCTCCA +
Preference number: 6 (lower is better)
Translates to: SFSGYHRGVLSR*DVLDKSINTSP
Trigger: TGGAGAGGTATTGATTGATTTATCTAGCACATCTCATCTGGACAACACTCCTCGGTGGTATCCGCTGAAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp GTTGTTGTTTGTCTTCATCAGGGACAATCAAAAGAGTaGTTTCCTCTCCAACCACCTCAGAAAACACCTCAG +
Preference number: 6 (lower is better)
Translates to: VVVCLHQGQSKE*FPLQPPQKTPQ
Trigger: CTGAGGTGTTTTCTGAGGTGGTTGGAGAGGAAAGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp GGTGGTCAATGTCTGCATAGAAGGAGTCTGCAGATATaGTTGATATTGGACTGCTTGCCATACTGCTTCTTT +
Preference number: 6 (lower is better)
Translates to: GGQCLHRRSLQI*LILDCLPYCFF
Trigger: AAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATGCAGACATTGACCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp TCTGAGGCCAAATGTGATATCATCTTGAAGAAGCCTTaGCCTAGAAGAAATACCACCAATGGACGAAGTGCT +
Preference number: 6 (lower is better)
Translates to: SEAKCDIILKKP*PRRNTTNGRSA
Trigger: AGCACTTCGTCCATTGGTGGTATTTCTTCTAGGGCAAGGCTTCTTCAAGATGATATCACATTTGGCCTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp GGGAACTTTAGCCATATCTGGATGGAGTACTTTCTGTaGACTTATGTCATCAGGGAGGGGTTTTTCATAAGG +
Preference number: 6 (lower is better)
Translates to: GNFSHIWMEYFL*TYVIREGFFIR
Trigger: CCTTATGAAAAACCCCTCCCTGATGACATAAGTCCACAGAAAGTACTCCATCCAGATATGGCTAAAGTTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp ATCGTAGTTGATTTGAAGCTGAATCTCTCCTGTAATTaGGTGAGAGGCAGTCTTGGACACATCAGTAGGCTT +
Preference number: 6 (lower is better)
Translates to: IVVDLKLNLSCN*VRGSLGHISRL
Trigger: AAGCCTACTGATGTGTCCAAGACTGCCTCTCACCCAATTACAGGAGAGATTCAGCTTCAAATCAACTACGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp CCTTCACAAATGGGTCCGAGTAGCCATTGTTGTCTCTaGGGACCAGGTTTCTTGCTTGAAGAATATGTATTA +
Preference number: 6 (lower is better)
Translates to: PSQMGPSSHCCL*GPGFLLEEYVL
Trigger: TAATACATATTCTTCAAGCAAGAAACCTGGTCCCCAGAGACAACAATGGCTACTCGGACCCATTTGTGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp CCTTCAGATGATGATTTTGAACTACCAGGACTACTGTaGGATTTCTCAATGGTGGGAACCTGCATATCCTTG +
Preference number: 6 (lower is better)
Translates to: PSDDDFELPGLL*DFSMVGTCISL
Trigger: CAAGGATATGCAGGTTCCCACCATTGAGAAATCCCACAGTAGTCCTGGTAGTTCAAAATCATCATCTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp TTACTGCCTGAGTGGAAGGACCTAATGATAAGTTTATaGGTGCTTCATCTCGAATCATGGGAAAAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: LLPEWKDLMISL*VLHLESWEKPG
Trigger: GCCAGGCTTTTCCCATGATTCGAGATGAAGCACCAATAAACTTATCATTAGGTCCTTCCACTCAGGCAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TATGGAAGGTGTTCTTATGGTTCCCAATGGCTCAGTTaGCACAGATATCTCTGCGACTGTTTGAACTGCTAC +
Preference number: 6 (lower is better)
Translates to: YGRCSYGSQWLS*HRYLCDCLNCY
Trigger: GTAGCAGTTCAAACAGTCGCAGAGATATCTGTGCAAACTGAGCCATTGGGAACCATAAGAACACCTTCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp GGTCAATGTCTGCATAGAAGGAGTCTGCAGATATGCTaGATATTGGACTGCTTGCCATACTGCTTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: GQCLHRRSLQIC*ILDCLPYCFFP
Trigger: AGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATGCAGACATTGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp ACGCAAGTGATAGGCTTCACTGTCAGACATAGCATGTaGGAAGTCATCCATGATGAATGCTATATCACGGTC +
Preference number: 6 (lower is better)
Translates to: TQVIGFTVRHSM*EVIHDECYITV
Trigger: GACCGTGATATAGCATTCATCATGGATGACTTCCAACATGCTATGTCTGACAGTGAAGCCTATCACTTGCGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CATTGCAACCGCAACTTCACTGTCAGACATAGCATGTaGGAAGTCATCCATGATGAATGCTATATCACGGTC +
Preference number: 6 (lower is better)
Translates to: HCNRNFTVRHSM*EVIHDECYITV
Trigger: GACCGTGATATAGCATTCATCATGGATGACTTCCAACATGCTATGTCTGACAGTGAAGTTGCGGTTGCAATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
CDS CAA 90 bp GTCTCAGCAGGAAGAGTTTCCATAGTAATAGTTTGCAGGCTGGCATaGATGTCAATACTGGTTACTGAGATGTCTGTTTCTGATGCACCT +
Preference number: 6 (lower is better)
Translates to: VSAGRVSIVIVCRLA*MSILVTEMSVSDAP
Trigger: AGGTGCATCAGAAACAGACATCTCAGTAACCAGTATTGACATCAATGCCAGCCTGCAAACTATTACTATGGAAACTCTTCCTGCTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp TTGCTTAATTTTCTCCAGTTCCAGGAGCTCTCGCTCCAAGTCAAGTaGCTGTTGTTGTTTGTCTTCATCAGGGACAATCAAAAGAGTGCT +
Preference number: 6 (lower is better)
Translates to: LLNFLQFQELSLQVK*LLLFVFIRDNQKSA
Trigger: AGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCTGGAACTGGAGAAAATTAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp AAGTATGGTGGTCAATGTCTGCATAGAAGGAGTCTGCAGATATGCTaGATATTGGACTGCTTGCCATACTGCTTCTTTCCTCCAAACCTA +
Preference number: 6 (lower is better)
Translates to: KYGGQCLHRRSLQIC*ILDCLPYCFFPPNL
Trigger: TAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATGCAGACATTGACCACCATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp AATTTTCTCCAGTTCCAGGAGCTCTCGCTCCAAGTCAAGTTGCTGTaGTTGTTTGTCTTCATCAGGGACAATCAAAAGAGTGCTTTCCNN +
Preference number: 6 (lower is better)
Translates to: NFLQFQELSLQVKLL*LFVFIRDNQKSAFX
Trigger: NNGGAAAGCACTCTTTTGATTGTCCCTGATGAAGACAAACAACAACAGCAACTTGACTTGGAGCGAGAGCTCCTGGAACTGGAGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
CDS TCA 72 bp TATTTTCTCGGGGCTTATCTCAAATCCTTCTGGGTCTaGTTCTATGCTAGGCGAGTATTCAGAACAAGAGGA +
Preference number: 6 (lower is better)
Translates to: YFLGAYLKSFWV*FYARRVFRTRG
Trigger: TCCTCTTGTTCTGAATACTCGCCTAGCATAGAATCAGACCCAGAAGGATTTGAGATAAGCCCCGAGAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp TCTCCAATAAGTGGCAACTTTCCATTTTCCTTATACTaGTGCCTGTCTAGAGCAAGAGGCTCTGGAGGAATT +
Preference number: 6 (lower is better)
Translates to: SPISGNFPFSLY*CLSRARGSGGI
Trigger: AATTCCTCCAGAGCCTCTTGCTCTAGACAGGCATCAGTATAAGGAAAATGGAAAGTTGCCACTTATTGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp CTTGTAAACCATGTCACAGCACACAGCTCGTCTTCCTaGAGTCAAATCAACTGGCTTTTCTTCATCTTCTAT +
Preference number: 6 (lower is better)
Translates to: LVNHVTAHSSSS*SQINWLFFIFY
Trigger: ATAGAAGATGAAGAAAAGCCAGTTGATTTGACTGCAGGAAGACGAGCTGTGTGCTGTGACATGGTTTACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp AATGTGTTTAATTATTTCTACCTTGGCATCCACCCGTaGTCGTATGGAAGGTGTTCTTATGGTTCCCAATGG +
Preference number: 6 (lower is better)
Translates to: NVFNYFYLGIHP*SYGRCSYGSQW
Trigger: CCATTGGGAACCATAAGAACACCTTCCATACGAGCACGGGTGGATGCCAAGGTAGAAATAATTAAACACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp CATAGAAGGAGTCTGCAGATATGCTTGATATTGGACTaGTTGCCATACTGCTTCTTTCCTCCAAACCTATTC +
Preference number: 6 (lower is better)
Translates to: HRRSLQICLILD*LPYCFFPPNLF
Trigger: GAATAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CCA 72 bp ATTGCAACCGCAACTTCACTGTCAGACATAGCATGTTaGAAGTCATCCATGATGAATGCTATATCACGGTCA +
Preference number: 6 (lower is better)
Translates to: IATATSLSDIAC*KSSMMNAISRS
Trigger: TGACCGTGATATAGCATTCATCATGGATGACTTCCAACATGCTATGTCTGACAGTGAAGTTGCGGTTGCAAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
CDS CAA 72 bp AGGCATATCCCACTCATCCTGATCTTCGTCATCAGTTaGGACACTGGTATCAACGCTCTTTTTAGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: RHIPLILIFVIS*DTGINALFSSS
Trigger: AGAAGAACTAAAAAGAGCGTTGATACCAGTGTCCAAACTGATGACGAAGATCAGGATGAGTGGGATATGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp AGAAGGAGTCTGCAGATATGCTTGATATTGGACTGCTaGCCATACTGCTTCTTTCCTCCAAACCTATTCTCA +
Preference number: 6 (lower is better)
Translates to: RRSLQICLILDC*PYCFFPPNLFS
Trigger: TGAGAATAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp TTGGTAAAGTATGGCTGCAGGCAATTGTTTGGCAGCTaGTTTTTCCAGGGTGAGTCTACTGATGCTATACTT +
Preference number: 6 (lower is better)
Translates to: LVKYGCRQLFGS*FFQGESTDAIL
Trigger: AAGTATAGCATCAGTAGACTCACCCTGGAAAAACAAGCTGCCAAACAATTGCCTGCAGCCATACTTTACCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp TGTCTGCATAGAAGGAGTCTGCAGATATGCTTGATATTGGACTGCTaGCCATACTGCTTCTTTCCTCCAAACCTATTCTCAAGTCTAAAC +
Preference number: 6 (lower is better)
Translates to: CLHRRSLQICLILDC*PYCFFPPNLFSSLN
Trigger: GTTTAGACTTGAGAATAGGTTTGGAGGAAAGAAGCAGTATGGCAAGCAGTCCAATATCAAGCATATCTGCAGACTCCTTCTATGCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp AACATCATACATTGCAACCGCAACTTCACTGTCAGACATAGCATGTaGGAAGTCATCCATGATGAATGCTATATCACGGTCATAACCCCT +
Preference number: 6 (lower is better)
Translates to: NIIHCNRNFTVRHSM*EVIHDECYITVITP
Trigger: AGGGGTTATGACCGTGATATAGCATTCATCATGGATGACTTCCAACATGCTATGTCTGACAGTGAAGTTGCGGTTGCAATGTATGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182915.2
CDS TCA 72 bp AGATTCATCCATTGTCACAACAGTCCTATGAGACTTTaGTGTGCTGAGATCTACCACTTCTCCATCAGTGAT +
Preference number: 6 (lower is better)
Translates to: RFIHCHNSPMRL*CAEIYHFSISD
Trigger: ATCACTGATGGAGAAGTGGTAGATCTCAGCACATCAAAGTCTCATAGGACTGTTGTGACAATGGATGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp CTCATGAAGTTCCAGATGCTGTGGATTTTCCGAGTCTaGCAACATATTGAGGTCCAGTCTTACACATATTTC +
Preference number: 6 (lower is better)
Translates to: LMKFQMLWIFRV*QHIEVQSYTYF
Trigger: GAAATATGTGTAAGACTGGACCTCAATATGTTGTCAGACTCGGAAAATCCACAGCATCTGGAACTTCATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp AGGATGCAGGTGGCATTTTGTCCATATCTCCAAGTTGTCCTGATATaGCTCTCTGTGTCTGACAGTTTAAACAAAGCCATTCTTGAATCT +
Preference number: 6 (lower is better)
Translates to: RMQVAFCPYLQVVLI*LSVSDSLNKAILES
Trigger: AGATTCAAGAATGGCTTTGTTTAAACTGTCAGACACAGAGAGCAATATCAGGACAACTTGGAGATATGGACAAAATGCCACCTGCATCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GCAACAACTAGTTCCTCACTCTCCTGGCTTTTAGTTTCTCGGAATTaGAGTTCAGGACTTTCATCAAAAGTTTCGTCATCTTCATCATGC +
Preference number: 6 (lower is better)
Translates to: ATTSSSLSWLLVSRN*SSGLSSKVSSSSSC
Trigger: GCATGATGAAGATGACGAAACTTTTGATGAAAGTCCTGAACTCAAATTCCGAGAAACTAAAAGCCAGGAGAGTGAGGAACTAGTTGTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp AACAGCATACGTATTATCAGTAGAAACTGGAGCAATCATCAGGGGTaGGTTGCGAATCACTTCATAGGTAGAAGTTATCTTAGGCTCCAA +
Preference number: 6 (lower is better)
Translates to: NSIRIISRNWSNHQG*VANHFIGRSYLRLQ
Trigger: TTGGAGCCTAAGATAACTTCTACCTATGAAGTGATTCGCAACCAACCCCTGATGATTGCTCCAGTTTCTACTGATAATACGTATGCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp TGGGTCCGAGTAGCCATTGTTGTCTCTGGGGACCAGGTTTCTTGCTaGAAGAATATGTATTATAAGATTTCCAAGATCGTAGTTGATTTG +
Preference number: 6 (lower is better)
Translates to: WVRVAIVVSGDQVSC*KNMYYKISKIVVDL
Trigger: CAAATCAACTACGATCTTGGAAATCTTATAATACATATTCTTCAAGCAAGAAACCTGGTCCCCAGAGACAACAATGGCTACTCGGACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp GTTTCCTCCTGGACTGCCTCGGAGTCTGATATCAAATCAAAAGGGTaGAATTTATTTACAACAGAGGAGACAGCACTTAAAGGATTAACA +
Preference number: 6 (lower is better)
Translates to: VSSWTASESDIKSKG*NLFTTEETALKGLT
Trigger: TGTTAATCCTTTAAGTGCTGTCTCCTCTGTTGTAAATAAATTCAACCCTTTTGATTTGATATCAGACTCCGAGGCAGTCCAGGAGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 90 bp GCCATACTGCTTCTTTCCTCCAAACCTATTCTCAAGTCTAAACTATaGTACTTACTCCCGAGATGGGAAACAGCATACGTATTATCAGTA +
Preference number: 6 (lower is better)
Translates to: AILLLSSKPILKSKL*YLLPRWETAYVLSV
Trigger: TACTGATAATACGTATGCTGTTTCCCATCTCGGGAGTAAGTACAATAGTTTAGACTTGAGAATAGGTTTGGAGGAAAGAAGCAGTATGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp GTAGAAGTTATCTTAGGCTCCAAATACAATGTGGTTTaGCGAGGCTTTTGTTGTATCACCATCATCTGTGAT +
Preference number: 6 (lower is better)
Translates to: VEVILGSKYNVV*RGFCCITIICD
Trigger: ATCACAGATGATGGTGATACAACAAAAGCCTCGGCAAACCACATTGTATTTGGAGCCTAAGATAACTTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 72 bp GTGGCATTTTGTCCATATCTCCAAGTTGTCCTGATATaGCTCTCTGTGTCTGACAGTTTAAACAAAGCCATT +
Preference number: 6 (lower is better)
Translates to: VAFCPYLQVVLI*LSVSDSLNKAI
Trigger: AATGGCTTTGTTTAAACTGTCAGACACAGAGAGCAATATCAGGACAACTTGGAGATATGGACAAAATGCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TCATTTGCAGCTGGAAAAGCTTTATATTTGTGGGGTTaGTGCATCATTTCTTCATACATCTCCTCAGCGCTT +
Preference number: 6 (lower is better)
Translates to: SFAAGKALYLWG*CIISSYISSAL
Trigger: AAGCGCTGAGGAGATGTATGAAGAAATGATGCACAAACCCCACAAATATAAAGCTTTTCCAGCTGCAAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TCGTCTCGTTCATTTGCAGCTGGAAAAGCTTTATATTaGTGGGGTTTGTGCATCATTTCTTCATACATCTCC +
Preference number: 6 (lower is better)
Translates to: SSRSFAAGKALY*WGLCIISSYIS
Trigger: GGAGATGTATGAAGAAATGATGCACAAACCCCACAAATATAAAGCTTTTCCAGCTGCAAATGAACGAGACGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp AAACCTCATTCGCTGTGGTCTGCCTTTTCACATCCATaGCAGAAGCAGAAAGATCCATACATTTTTCAGTTA +
Preference number: 6 (lower is better)
Translates to: KPHSLWSAFSHP*QKQKDPYIFQL
Trigger: TAACTGAAAAATGTATGGATCTTTCTGCTTCTGCAATGGATGTGAAAAGGCAGACCACAGCGAATGAGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp GGAAGAGTTTCCATAGTAATAGTTTGCAGGCTGGCATaGATGTCAATACTGGTTACTGAGATGTCTGTTTCT +
Preference number: 6 (lower is better)
Translates to: GRVSIVIVCRLA*MSILVTEMSVS
Trigger: AGAAACAGACATCTCAGTAACCAGTATTGACATCAATGCCAGCCTGCAAACTATTACTATGGAAACTCTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp CGTATTATCAGTAGAAACTGGAGCAATCATCAGGGGTaGGTTGCGAATCACTTCATAGGTAGAAGTTATCTT +
Preference number: 6 (lower is better)
Translates to: RIISRNWSNHQG*VANHFIGRSYL
Trigger: AAGATAACTTCTACCTATGAAGTGATTCGCAACCAACCCCTGATGATTGCTCCAGTTTCTACTGATAATACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS GCA 72 bp TTTGCAGCTGGAAAAGCTTTATATTTGTGGGGTTTGTaGATCATTTCTTCATACATCTCCTCAGCGCTTTTT +
Preference number: 6 (lower is better)
Translates to: FAAGKALYLWGL*IISSYISSALF
Trigger: AAAAAGCGCTGAGGAGATGTATGAAGAAATGATGCACAAACCCCACAAATATAAAGCTTTTCCAGCTGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS GCA 72 bp CTGTATTGTAACTCAGTATGTTTTGATGTAGTAAGCTaGAGTGGTGATGTTACTGCATGTTCTATACCCACT +
Preference number: 6 (lower is better)
Translates to: LYCNSVCFDVVS*SGDVTACSIPT
Trigger: AGTGGGTATAGAACATGCAGTAACATCACCACTGCAGCTTACTACATCAAAACATACTGAGTTACAATACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp TCTCGTTCATTTGCAGCTGGAAAAGCTTTATATTTGTaGGGTTTGTGCATCATTTCTTCATACATCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SRSFAAGKALYL*GLCIISSYISS
Trigger: TGAGGAGATGTATGAAGAAATGATGCACAAACCCCACAAATATAAAGCTTTTCCAGCTGCAAATGAACGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS TCA 72 bp ATAGATGGTGCTATACCAGGAAAAGAAATCATAATCTaGTCAGCGTTAGTTCTACTTTCTGGTGTGATGGTT +
Preference number: 6 (lower is better)
Translates to: IDGAIPGKEIII*SALVLLSGVMV
Trigger: AACCATCACACCAGAAAGTAGAACTAACGCTGATCAGATTATGATTTCTTTTCCTGGTATAGCACCATCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CCA 72 bp ATTCTCAAGTCTAAACTATTGTACTTACTCCCGAGATaGGAAACAGCATACGTATTATCAGTAGAAACTGGA +
Preference number: 6 (lower is better)
Translates to: ILKSKLLYLLPR*ETAYVLSVETG
Trigger: TCCAGTTTCTACTGATAATACGTATGCTGTTTCCCATCTCGGGAGTAAGTACAATAGTTTAGACTTGAGAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
ENSMUST00000182915.2
CDS CAA 90 bp CTTAAAGGATTAACATCTGAGAAGAAACCAGGCATCATACTAGACTaGTATTCTTCCTTAAAATCAGTTCTGGACTTGGATTCTTTCAAG +
Preference number: 6 (lower is better)
Translates to: LKGLTSEKKPGIILD*YSSLKSVLDLDSFK
Trigger: CTTGAAAGAATCCAAGTCCAGAACTGATTTTAAGGAAGAATACAAGTCTAGTATGATGCCTGGTTTCTTCTCAGATGTTAATCCTTTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8
CDS CAA 72 bp TTAACATCTGAGAAGAAACCAGGCATCATACTAGACTaGTATTCTTCCTTAAAATCAGTTCTGGACTTGGAT +
Preference number: 6 (lower is better)
Translates to: LTSEKKPGIILD*YSSLKSVLDLD
Trigger: ATCCAAGTCCAGAACTGATTTTAAGGAAGAATACAAGTCTAGTATGATGCCTGGTTTCTTCTCAGATGTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000030691.17
ENSMUST00000182407.8